Heterochromatin variation in the Australian rodent Uromys caudimaculatus.

Ten individuals of Uromys caudimaculatus sampled from Queensland gave evidence for the occurrence of two distinct chromosome races characterised by marked differences in their pattern of C-banding. In all four individuals from the north, thirteen of the twenty three chromosome which make up the standard haploid set had substantial distal C-blocks in addition to the smaller centric blocks which characterise all chromosomes other than the Y. Additionally two pairs had an interstitial block. By contrast none of the six southern individuals had fixed distal blocks though all of them except the Y carry pro-centric C-blocks and again one pair showed an interstitial block. The southern karyotype was, however, characterised by the presence of from six to nine mitotically stable supernumerary chromosomes all of which were totally C-positive despite the fact that at least five morphologically distinguishable types have been defined. While the relationship of these two types of constitutive heterochromatin remains to be clarified the large amount present in both northern and southern animals suggests that heterochromatin plays an important role in the basic biology of this species.     

Isolation and characterization of 11 polymorphic microsatellite loci in the giant white‐tailed rat (Uromys caudimaculatus)

Microsatellite loci were developed for the giant white‐tailed rat (Uromys caudimaculatus) to aid in assigning paternity and to subsequently investigate their mating system and sex‐biased dispersal characteristics. Twenty‐two primer sets were originally developed and of these, 11 were polymorphic with between five and 10 alleles per locus. In addition, two primer sets designed for Hydromys chyrsogaster also amplified in this species despite an evolutionary divergence of 15 million years (Myr).     

Interspecific variation of sperm morphology in the Australian rodent genus Zyzomys

The sperm head morphology and tail length of two species of Australian rock rats, Zyzomys argurus and Zyzomys pedunculatus, are presented. In Z. argurus the sperm head has an apical hook together with two ventral processes extending from the upper concave surface that are largely composed of cytoskeletal material, and the sperm tail is about 135 µm in length. By contrast, in Z. pedunculatus the sperm head is paddle‐shaped with the nucleus capped by an acrosome that has a large apical segment and is surrounded by a thin layer of cytoskeletal material, and the sperm tail is only around 85 µm in length. Since the structure of the spermatozoon of Z. argurus is similar to that of most of the old endemic Australian rodents it is presumed to be the ancestral condition within the Zyzomys genus with that of Z. pedunculatus being highly derived and showing convergence with the sperm structure in some other orders of mammals.     

Cytogenetic variability in four species of Gnamptogenys Roger, 1863 (Formicidae: Ectatomminae) showing chromosomal polymorphisms,species complex,and cryptic species

Protoplasma - Gnamptogenys includes 138 described species that are widely distributed, with high diversity, in the Neotropics. Some Neotropical species have taxonomic issues, as is the case with...     

Constitutive heterochromatin variation in two species of rattus with apparently similar karyotypes

Rattus blanfordi and R. cutchicus medius both have a chromosome complement of 2n=36 and all chromosomes except the submetacentric Y of R. blanfordi are acrocentric. The apparently similar karyotypes of the two species, however, show variations in the nature and quantity of C-band-positive constitutive heterochromatin (C-heterochromatin) as revealed by C- and G-banding and Hoechst 33258 fluorescence. R. blanfordi with large-sized X and Y chromosomes and conspicuously larger centromeric heterochromatin in all the autosomes as compared to that of R. cutchicus medius has much more C-heterochromatin in its genome than the latter. The variation in the quantity of C-heterochromatin has been accomplished without altering the morphology of the acrocentric chromosomes unlike other mammals in which variations have been reported to result generally in the addition or deletion of a totally heterochromatic second arm.     

Cytogenetic studies on the origin and species differentiation of the Philippine medaka, Oryzias luzonensis

The origin and species differentiation of the Philippine medaka, Oryzias luzonensis , was studied by means of karyotype analyses and interspecific hybridyzations. The karyotype revealed 2n = 48 consisting of 24 pairs of biarmed chromosomes (NF = 96). Characteristic C-bands were found in three sub-metacentric pairs. Nucleolar organizer regions (NORs) were detected on the short arms of the satellited sub-metacentric pair. Estimated DNA-value was 1.9 pg per nucleus. Interspecific crosses revealed that O. luzonensis was allied most closely to O. latipes (biarmed chromosome type), less closely to O. celebensis (fused chromosome type), and least closely to O. melastigma and O.javanicus (monoarmed chromosome type), which are distributed in east Asia, the Sulawesi, and south-west Asia and west side of south-east Asia, respectively. The external appearance of O. luzonensis was also more similar to that of O. latipes . From these results, we concluded that O. luzonensis is a member of the biarmed chromosome group and the nearest relative to O. latipes . Thus, the Philippine medaka seems to be of east Asiatic origin, having migrated to northern Luzon from the China continent via Formosa.     

Cytogenetic analysis of the third chromosome heterochromatin of Drosophila melanogaster

Previous cytological analysis of heterochromatic rearrangements has yielded significant insight into the location and genetic organization of genes mapping to the heterochromatin of chromosomes X, Y, and 2 of Drosophila melanogaster. These studies have greatly facilitated our understanding of the genetic organization of heterochromatic genes. In contrast, the 12 essential genes known to exist within the mitotic heterochromatin of chromosome 3 have remained only imprecisely mapped. As a further step toward establishing a complete map of the heterochomatic genetic functions in Drosophila, we have characterized several rearrangements of chromosome 3 by using banding techniques at the level of mitotic chromosome. Most of the rearrangement breakpoints were located in the dull fluorescent regions h49, h51, and h58, suggesting that these regions correspond to heterochromatic hotspots for rearrangements. We were able to construct a detailed cytogenetic map of chromosome 3 heterochromatin that includes all of the known vital genes. At least 7 genes of the left arm (from l(3)80Fd to l(3)80Fj) map to segment h49-h51, while the most distal genes (from l(3)80Fa to l(3)80Fc) lie within the h47-h49 portion. The two right arm essential genes, l(3)81Fa and l(3)81Fb, are both located within the distal h58 segment. Intriguingly, a major part of chromosome 3 heterochromatin was found to be "empty," in that it did not contain either known genes or known satellite DNAs.     

准噶尔盆地啮齿动物群落多样性与物种变化的分析

对准噶尔盆地的抽样调查,经聚类分析,该地区的鼠类可划分为4种群落：(1)以灰仓鼠（Cricetulus migratourius）+小家鼠（Mus musculus）为主的农田鼠类群落;(2)以红尾沙鼠（Meriones erythrourus）+灰仓鼠为主的砾石荒漠鼠类群落;(3)以褐家鼠（Rattus norvegicus）+小家鼠为主的城镇居民点鼠类群落;(4)以子午沙鼠（M.meridianus）+三趾跳鼠（Dipus sagitta）为主的梭梭荒漠鼠类群落。其群落多样性指数以群落(4)为最高（1.671）,群落(3)最低（0.979）。随着人类经济活动的增长,荒漠被大量开垦为农田,以及新兴市镇的涌现,使得原来以沙鼠属（Meriones）和跳鼠科（Dipodidae）为主要成分的荒漠鼠类群落逐渐被喜潮湿的灰仓鼠和小家鼠所替代,有些地区还出现了以褐家鼠为主的新格局。     

Intraspecific variation in sex heterochromatin of species B of the Anopheles dirus complex in Thailand

Cytological examination of F1 larval mitotic chromosomes from a total of 126 families of Anopheles dirus species B from southern Thailand populations has revealed a pronounced quantitative variation of constitutive heterochromatin in the two sex chromosomes. Five types of X chromosomes and four types of Y chromosomes have been identified in this study. Such gross variation in sex chromosomes is most likely due to a gradual acquisition of extra heterochromatin.     

Sex-chromosome heterochromatin variation in the wood mouse,Apodemus sylvaticus

Variation in heterochromatin content, as revealed by G- and C-banding, was studied in the sex chromosomes of the wood mouse, Apodemus sylvaticus. The sex-chromosome heterochromatin was also characterized by DAPI staining. Variation in sex chromatin was recorded in extremely large (giant) sex chromosomes in certain individuals and populations. In some individuals, the Y chromosome was the largest element of the complement. Different variants of both the X and Y chromosomes were found within a single population. The variation is therefore a type of population polymorphism and should not be used for taxonomic discrimination.     

Cytogenetic studies on two F1 hybrids of autotetraploid rice varieties showing extremely high level of heterosis

Mechanisms of two F1 hybrids (D46A × DTP-4 and D46A × Dminghui63) of autotetraploid rice (2n = 4x = 48) showing extremely high pollen fertility 87.40% and 85.97%, respectively, seed set 82.00% and 79.00%, respectively and extremely high level of heterosis were analyzed cytologically. The chromosome pairing of D46A × DTP-4 and D46A × Dminghui63 was normal at metaphase I(MI), and had almost no I or III, with an average of 0.020I +14.36 II 6.44rod+7.91ring) +0.01III + 4.80 IV + 0.01VIII and 0.06 I + 17.67 II (11.01rod + 6.67ring)] + 0.06 III +3.10IV+0.01VI, respectively. The most frequent chromosome configurations were 10II+7IV and 12II+bIV. The bivalent frequency was less frequent in hybrids than that in restoring parents, and the same results were gained from univalents, trivalent and multivalents. However, the quadrivalent frequency was significantly higher in hybrids than that in restoring parents at MI. The other meiotic phases progressed normally, except for low percentages of PMCs with lagging chromosomes at AI and low percentages of PMCs with micronuclei at telophaseI (TI) and telophaseII (TII). PMCs with lagging chromosomes at AI and PMCs with micronuclei at TI and TII showed negative correlation between pollen fertility and seed set. Above 90% of the PMCs could form normal microspores, which resulted in the production of viable pollen grains, abnormal microspores were observed including penta-fission and hexa-fission. Based on these results we suggest that the two F1 hybrids had better behaviors of chromosome pairing and genetic stability than autotetraploid rice and other autotetraploid plants ever studied.     

NORs, heterochromatin, and R-bands in three species of Cervidae

Chromomycin A3 banding of the chromosomes of three species of Cervidae (red deer, fallow deer, roe deer) allows the demonstration of both centromeric constitutive heterochromatin and R-banding patterns useful for identifying all the chromosomes of a given karyotype. In all three species significant amounts of chromomycin-bright heterochromatin are present at the centromeres of all autosomes. The X chromosomes of all investigated species contained appreciable amounts of centromeric heterochromatin. AgNO3 staining was applied sequentially to detect the location of active nucleolus organizer regions (NORs). The distribution of NORs was reasonably conservative in the investigated species.     

Cytogenetic and molecular characterization of heterochromatin gene models in Drosophila melanogaster

In the past decade, genome-sequencing projects have yielded a great amount of information on DNA sequences in several organisms. The release of the Drosophila melanogaster heterochromatin sequence by the Drosophila Heterochromatin Genome Project (DHGP) has greatly facilitated studies of mapping, molecular organization, and function of genes located in pericentromeric heterochromatin. Surprisingly, genome annotation has predicted at least 450 heterochromatic gene models, a figure 10-fold above that defined by genetic analysis. To gain further insight into the locations and functions of D. melanogaster heterochromatic genes and genome organization, we have FISH mapped 41 gene models relative to the stained bands of mitotic chromosomes and the proximal divisions of polytene chromosomes. These genes are contained in eight large scaffolds, which together account for approximately 1.4 Mb of heterochromatic DNA sequence. Moreover, developmental Northern analysis showed that the expression of 15 heterochromatic gene models tested is similar to that of the vital heterochromatic gene Nipped-A, in that it is not limited to specific stages, but is present throughout all development, despite its location in a supposedly "silent" region of the genome. This result is consistent with the idea that genes resident in heterochromatin can encode essential functions.     

Geographic variation in walnut seed size correlates with hoarding behaviour of two rodent species

Seeds of the Japanese walnut, Juglans ailanthifolia, are usually scatter-hoarded by two rodent species, the Japanese squirrel Sciurus lis and the field mouse Apodemus speciosus, but only by the latter in several areas where S. lis is absent. We examined seed-size-mediated interactions of these three species across a wide geographic range. Field tracking of walnuts with miniature radio-transmitters revealed that squirrels hoarded larger seeds more frequently and at greater distances than smaller seeds. In contrast, mice hoarded smaller seeds more frequently and transported them farther than larger seeds. These seed dispersers could affect the evolution of seed size because seeds hoarded at sites farther from source trees are known to survive better until germination and as seedlings. We expect that larger seeds may be advantageous in regeneration if the main seed dispersers are squirrels, whereas smaller seeds may be advantageous if mice are the dominant dispersers. These predictions were supported by the fact that seed size was smaller on islands inhabited only by mice and at the edge of the squirrel distribution, compared to areas where mice and squirrels are both common.     

Cytogenetic studies in South American species of Serjania (Sapindaceae: Paullinieae)

Abstract

Serjania Mill. (Paullinieae) is considered the most important neotropical genus of Sapindaceae due to species number and its widespread distribution. In this study, 14 species belonging to three sections were analyzed using conventional staining, C/CMA/DAPI banding, and fluorescence in situ hybridization (FISH) with a 18S-5.8S-26S rDNA probe. New chromosome counts are reported for Serjania crassifolia, Serjania platycarpa, and Serjania regnellii, all with 2n = 24, which is remarkably constant for Serjania. The karyotypes are moderately asymmetric, and variations observed in A1 and A2 indices show resemblances between S. platycarpa, Serjania hebecarpa, and S. crassifolia, and between Serjania communis, Serjania gracilis, and S. regnellii. The banding pattern was homogeneous in Serjania. C/DAPI bands (AT-rich sites) were not clearly evidenced, but changes in the number and position of GC-rich sites (CMA bands) were observed. These segments were associated with 18S-5.8S-26S rDNA sites. The significance of the results is discussed in relation to chromosomal data available for the genus and in regard to the infrageneric treatment of Serjania.     

Structural variation in the heterochromatin of rye chromosomes in triticales

Summary Although Giemsa C-banding techniques have been used extensively for assaying cereal heterochromatin, a more specific technique for analyzing cereal heterochromatin has been developed recently with the isolation of DNA sequences present in heterochromatin and their employment in in situ hybridization to cereal chromosomes. A number of triticales were examined for the occurrence of modified rye chromosomes using the in situ hybridization technique. With a heterogeneous sequence probe the amount of rye heterochromatin appears to be relatively constant in wheat backgrounds but when a specific sequence probe was employed variation was observed. Whether this variation reflects polymorphism in rye or whether it is a result of adaption of the rye genome to coexistence with the wheat genome in triticales is discussed. — The triticale Rosner was examined in detail and it was established that the rye chromosome 2R had been replaced by the wheat chromosome 2D.