Palynofacies distribution in a lacustrine basin

The Miocene basin of La Cerdanya (Pyrenees, Catalonia, Spain) consist of lacustrine diatomites and fan-deltaic (palustrine) lutites with lignites. A multidisciplinary analysis of palynofacies, organic geochemistry, taphofacies of plant macroremains and sedimentology was carried out in order to characterise taphonomically this basin. Palustrine facies contain highly diverse assemblages of palynomorphs and other palynological matter. The presence of relatively high amount of planar organic remains, mostly cuticles, in this palynofacies is indicative of deposition in the proximal parts of the basin. The organic content is low (1% TOC) except in the case of lignites, where it reaches up to 50%. Generally the Hydrogen Index (HI) values of the palustrine sediments are also relatively low (HI 70-189). Diatomite samples from the lake centre are characterised by high amount of the chlorococcalean alga Botryococcus and sapropelic organic matter and a HI above 500. In contrast, samples from the lake margins comprise Botryococcus, bisaccates and other anemophilous angiosperm pollen and have HI below 410. The TOC of lacustrine samples may reach levels of up to 45.5%. Palynofacies distribution shows a positive correlation with plant taphofacies only in the palustrine sediments but not in the lacustrine facies of the basin. Taphofacies of plant macroremains in the lacustrine sediments display a downslope polarity whereas palynofacies are distributed radially. A variety of transport mechanisms and different origins of palynological matter in comparison to plant macroremains account for this difference.     

Consistent patterns in diatom assemblages and diversity measures across water‐depth gradients from eight Boreal lakes from north‐western Ontario (Canada)

1. Until recently, the distribution of diatom species assemblages and their attributes (e.g. species richness and evenness) in relation to water depth have been identified but not quantified, especially across several lakes in a region. Here, we examined diatom assemblages in the surface sediment across a water‐depth gradient in eight small, boreal lakes in north‐western Ontario, minimally disturbed by human activities. 2. Surface‐sediment diatom assemblages were collected within each lake along a gentle slope from near‐shore to the centre deep basin of the lake, at a resolution of ～1 m water depth. Analysis of sedimentary samples provided an integrated view of assemblages that were living in the lake over several years and enabled a high‐resolution analysis of many lakes. The study lakes ranged in water chemistry, morphology and size and are located along an east–west transect approximately 250 km long in north‐western Ontario (Canada). 3. The majority of diatom species were distributed along a continuum of depth, with those taxa having similar habitat requirements forming distinct, though overlapping, assemblages. Three major zones of diatom assemblages in each lake were consistently identified: (i) a near‐shore assemblage of Achnanthes (sensu lato), Nitzschia, Cymbella (sensu lato) and other benthic species; (ii) a mid‐depth assemblage of small Fragilaria (sensu lato)/small Aulacoseira and various Navicula taxa; and (iii) a deep‐water assemblage of planktonic origin (mainly Discotella spp.). 4. The depth of the transition between assemblage zones varied between the eight lakes. The boundary between the deep‐water planktonic zone and the mid‐depth benthic zone varied according to water chemistry and was probably related to light attenuation. The boundary was deeper in lakes with the lower dissolved organic carbon and total phosphorus (TP) (i.e. less light attenuation) and vice versa. 5. Generally, species richness, species evenness and turnover rate of species as a function of depth were significantly lower in the planktonic assemblage zone in comparison with the two zones nearer the shore. Reproducibility of species and assemblage distributions across the depth gradient of the lakes illustrated that, despite potential for sediment transport, detailed ecological characterisation of diatom species can be gleaned from sedimentary data. Such data are often lacking, particularly for near‐shore benthic species.     

The distribution of phosphate over iron-bound and calcium-bound phosphate in stratified sediments

Release of phosphate from, and adsorption ontosediments is calculated as a chemical equilibriumbetween dissolved o-phosphate and two solidphosphates, i.e. iron- and calcium-bound phosphate.Organic phosphates play a minor role, if any at all.Using chemical equilibrium equations, the distributionof the two solid inorganic phosphates is calculatedfrom the accumulated phosphate quantity as function oftime and depth in sediment layers of shallow lakes orwetlands. It is shown that this distribution dependson water depth, pH, Ca²⁺ concentration in thewater, Fe(OOH) concentration in the sediments andmaximal binding capacity of the sediments. Bycomparing values of dissolved phosphate at differentpH values, it is shown that acidification, whichusually takes place in hypolimnia, will cause releaseof phosphate, which is not necessarily dependent onthe redox potential. The release does depend on pH,Ca²⁺ concentration in the water, CaCO₃concentration in the sediments and the saturationstage of the two P-pools in the surface layers ofthese sediments. This revised version was published online in July 2006 with corrections to the Cover Date.     

Binding of phosphate in sediment accumulation areas of the eastern Gulf of Finland,Baltic Sea

The relationships between P and components binding P were studied by analysing the concentrations of N, P, Fe, Mn, Ca and Al in sediments and pore water along the estuarine transect of the River Neva in August 1995. The high sediment organic matter concentration resulted in low surface redox potential and high pore-water o-P concentration, whereas the abundance of amphipods resulted in high surface redox potentials and low pore-water o-P concentration. However, despite the variation in sediment organic matter and the abundance of amphipods, very reduced conditions and slightly variable concentrations of Tot-P (0.7–1.1 mg g^–1 DW) were observed in the 10–15 cm sediment depth along the estuarine gradient, indicating that the pools of mobile P were largely depleted within the depth of 0–15 cm. Multiple regression analysis demonstrated that organic matter and Tot-Fe concentration of the sediment were closely related to the variation in Tot-P concentration of the sediments (r ² = 0.817, n=32). In addition, the high total Fe:P ratio suggested that there is enough Fe to bind P in sediments along the estuarine gradient. However, low Fe_diss concentrations in the pore water of reduced sediment (redox-potential <–50 mV) indicated efficient precipitation of FeS (FeS and FeS₂), incapable to efficiently bind P. Consequently, the low Fe_diss:o-P ratio (< 1) recorded in pore water in late summer implied that Fe³⁺ oxides formed by diffusing Fe_diss in the oxic zone of the sediments were insufficient to bind the diffusing o-P completely. The measured high o-P concentrations in the near-bottom water are consistent with this conclusion. However, there was enough Fe_diss in pore water to form Fe³⁺ oxides to bind upwards diffusing P in the oxic sediment layer of the innermost Neva estuary and the areas bioturbated by abundant amphipods.     

Palynofacies Analysis of Inner Continental Shelf and Middle Slope Sediments offshore Egypt, South-eastern Mediterranean

Marine palynological studies of Quaternary sediments usually focus on dinoflagellate and pollen assemblages for paleoceanographic and paleohydrographic interpretations of past events. This paper focuses on the use of palynofacies analysis for paleohydrological reconstructions of deltaic and deep sea environments to evaluate transport of organic matter to the ocean. These palynodebris data are used to interpret palaeoenvironmental and paleohydrographic changes in two marine cores from the continental shelf (core-1, 27 m water depth) and middle slope (core-2, 1030 m) offshore Egypt, south-eastern Mediterranean Sea, during the latest Pleistocene and the Holocene. The relative abundances of various types of sedimentary organic matter such as phytoclasts, zooclasts, amorphous organic matter and palynomorphs are related to paleohydrographic changes of the overlying water column. Based on the total palynodebris and organic carbon content, sediments of the inner continental shelf core are characteristic of a prodelta environment proximal to a fluvio-deltaic source and moderately distal oxic environments with enhanced structured organic matter preservation potential. In contrast, the palynodebris of the middle slope core show that the basal sediments (105-140 cm depth) indicate suboxic to dysoxic bottom water conditions, followed by anoxic-suboxic bottom water conditions for the interval from 30-85 cm, which represents the S1 Sapropel. The top sediments of core-2 (0-25 cm) were deposited under oxic bottom water conditions, suggesting good ventilation in the water column. A quantitative approach was also used for interpreting the Holocene sea-level changes, based on the correlation between phytoclast and organic matter abundances. Sedimentation rate in the continental shelf is varied, being relatively very low (6.7 cm/kyr) in the basal part and increased upward to be 20 cm/kyr (depth 115-120 cm). In the upper Gray clayey silt layer the sedimentation rate was high (about 40-45 cm/kyr) due to the high discharge from El Manzala Lagoon and Damietta Nile branch. In the middle slope depth the sedimentation rate was relatively low and uniform, around 14 cm/kyr.     

Effect of organic carbon flux and dissolved oxygen on the benthic foraminiferal oxygen index (BFOI)

Variations in oceanic primary productivity, flux of organic carbon to the sediments, and dissolved-oxygen levels in the water column are thought to be important in the control of benthic foraminiferal test size, wall thickness, morphology, and species composition of assemblages by many foraminiferal paleontologists. Aspects of these processes should be reflected by the benthic foraminiferal oxygen index (BFOI) based on these foraminiferal characteristics. However, analyses indicate that the BFOI correlates most strongly with dissolved-oxygen levels in overlying water (R²=0.81), weakly with oceanic primary productivity (R²=0.55), and weakly with organic carbon flux to the sediments (R²=0.51). Although both dissolved oxygen and organic carbon flux are main controlling factors for benthic foraminiferal assemblages, the BFOI is a useful indicator extracted from benthic foraminiferal assemblages for estimating the condition of dissolved oxygen in Cretaceous and Cenozoic oceans.     

Estimates of bacterial productivity in marine sediments and water from a temperate saltmarsh lagoon

Tritiated thymidine incorporation (TTI) into DNA was used to estimate bacterial productivity in sediment and water samples from two sites in Langebaan Lagoon, South Africa. Routine analysis of isotope dilution showed seasonal variations of approximately threefold in the thymidine precursor pool sizes for bacterial assemblages from each site. Dual label incorporation of [³H]-thymidine and ¹⁴C-leucine into DNA and protein, respectively, showed that pelagic but not sediment assemblages were in a balanced state of growth during TTI. This is the first report of dual label measurements of bacterial production in sediments. Sediments supported bacterial productivities that exceeded those in the water column by factors from five- to 950-fold, whereas bacterial abundance supported by sediments exceeded that in the water column by more than 3 orders of magnitude. Estimates of bacterial productivities in sediments were coincident with levels of organic content in sediments, but not with bacterial abundance. Measurements of TTI activity for 5 different benthic microhabitats at one lagoon site showed highest activity associated with seagrass beds (2.11 ± 0.84 nmol thymidine hours^–1 g-1 dry weight), whereas activities decreased with depth (0.46 ± 0.21 nmol thymidine hours^–1 g^–I dry weight) below sediment surface.Offprint requests to: B. J. Tibbles.     

Palynofacies and TOC analysis of marine and non-marine sediments across the Middle–Upper Jurassic boundary in the central-northern Lusitanian Basin (Portugal)

The Middle–Upper Jurassic transition is a geodynamic benchmark in the evolutionary history of several peri-Atlantic basins. Contrary to the vast Tethyan and peri-Tethyan areas, in the Lusitanian Basin (Portugal), this interval corresponds to a major basin-wide disconformity preceded by a complex forced regression that induced sharp facies variations across the depositional systems. The Middle Jurassic units below are fully marine, whereas the Upper Jurassic sediments (Lower?-Middle Oxfordian), correspond to freshwater/brackish lacustrine, grading into punctuated brackish-restricted lagoonal and shallow-marine paleoenvironments. This study presents total organic carbon and palynofacies data of 34 samples (total analyzed thickness about 85 m) collected from three key sections encompassing the Middle–Upper Jurassic transition in the central-northern sector of the Lusitanian Basin. The palynofacies of the analyzed part of Middle Jurassic units (Cabo Mondego Formation) are characteristic of marine environments at their base, evidencing upwards a regressive trend of the depositional systems. Total organic carbon content is generally low, reaching up to 1.94 wt%. The Upper Jurassic Cabaços Formation presents kerogen assemblages mostly of continental origin, although punctuated by minor intervals of marine influence. Total organic carbon content is more variable, reaching up to 30.56 wt%. Intraclasts of re-deposited fragments of microbial mats were found incorporated in the kerogen assemblages, which point to highly dynamic erosional and depositional processes. Diversity of Botryococcus sp. occurrences was confirmed as an indicator of the degree of paleoenvironmental stability. The vertical distribution and comparison of the kerogen assemblages of the different sections indicate major changes of these parameters among relatively close settings and along narrow vertical intervals, attesting to the high sedimentary dynamics observed in the Lusitanian Basin.     

Organic matter diagenesis at the oxic/anoxic interface in coastal marine sediments,with emphasis on the role of burrowing animals

The present paper reviews the current knowledge on diagenetic carbon transformations at the oxic/anoxic interface in coastal marine sediments. Oxygen microelectrodes have revealed that most coastal sediments are covered only by a thin oxic surface layer. The penetration depth of oxygen into sediments is controlled by the balance between downward transport and consumption processes. Consumption of oxygen is directly or indirectly caused by respiration of benthic organisms. Aerobic organisms have the enzymatic capacity for complete oxidation of organic carbon. Anaerobic decay occurs stepwise, involving several types of bacteria. Large organic molecules are first fermented into small moieties. These are then oxidized completely by anaerobic respirers using a sequence of electron acceptors: Mn⁴⁺, NO₃ ^-, Fe³⁺, SO₄ ^2- and CO₂. The quantitative role of each electron acceptor depends on the sediment type and water depth. Since most of the sediment oxygen uptake is due to reoxidation of reduced metabolites, aerobic respiration is of limited importance. It has been suggested that sediments contain three major organic fractions: (1) fresh material that is oxidized regardless of oxygen conditions; (2) oxygen sensitive material that is only degraded in the presence of oxygen; and (3) totally refractory organic matter. Processes occurring at the oxic/anoxic boundaries are controlled by a number of factors. The most important are: (1) temperature, (2) organic supply, (3) light, (4) water currents, and (5) bioturbation. The role of bioturbation is important because the infauna creates a three-dimensional mosaic of oxic/anoxic interfaces in sediments. The volume of oxic burrow walls may be several times the volume of oxic surface sediment. The infauna increases the capacity, but not the overall organic matter decay in sediments, thus decreasing the pool of reactive organic matter. The increase in decay capacity is partly caused by injection of oxygen into the sediment, and thereby enhancing the decay of old, oxygen sensitive organic matter several fold. Finally, some future research directions to improve our understanding of diagenetic processes at the oxic/anoxic interface are suggested.     

Glacial Holocene environment of the southeastern Okhotsk Sea: evidence from geochemical and palaeontological data

Environmental conditions and productivity changes in the southeastern Okhotsk Sea have been reconstructed for the last 20 ka using planktonic and benthic foraminiferal oxygen isotope records and calcium carbonate, organic carbon and opal content data from two sediment cores. Species variability in benthic foraminiferal and diatom assemblages provides additional palaeoceanographic evidence. AMS radiocarbon dating of the sediments and oxygen isotope stratigraphy serve as the basis for the age models of the cores for the last 20 ¹⁴C kyr and for correlation between environmental variations in the Okhotsk Sea, and regional and global climate changes. Benthic foraminiferal assemblages in the two cores (depth 1590 and 1175 m) varied with time, so that we could recognise seven zones with different species composition. Changes in the benthic foraminiferal assemblages parallel major environmental and productivity variations. During the last glaciation, fluxes of organic matter to the sea floor showed strong seasonal variations, indicated by the presence of abundant A. weddellensis and infaunal Uvigerina spp. Benthic foraminiferal assemblages changed with warming at 12.5–11 and 10–8 ¹⁴C kyr BP, when productivity blooms and high organic fluxes were coeval with global meltwater pulses 1A and 1B. Younger Dryas cooling caused a decline in productivity (11–10 kyr BP) affecting the benthic faunal community. Subsequent warming triggered intensive diatom production, opal accumulation and a strong oxygen deficiency, causing significant changes in benthic fauna assemblages from 5.26–4.4 kyr BP to present time.     

Properties and distribution of sediment in the Salton Sea,California: an assessment of predictive models

The Salton Sea is the largest lake, on a surface area basis, in California (939 km²). Although saline (>44 g/l) and shallow (mean depth approximately 9.7 m), it provides valuable habitat for a number of endangered species. The distribution of sediments and their properties within the Salton Sea are thought to have significant influence on benthic ecology and water quality. Sediment properties and their distribution were quantified and compared with predicted distributions using several sediment distribution models. Sediment samples (n = 90) were collected using a regular staggered-start sampling grid and analyzed for water content, organic carbon (C), calcium carbonate, total nitrogen (N), total phosphorus (P), organic phosphorus, and other properties. Water content, total N, and total and organic P concentrations were all highly correlated with organic C content. The organic C concentration showed a non-linear increase with depth, with low organic C contents (typically 1–2%) present in sediments found in depths up to 9 m, followed by a strong increase in organic C at greater depths (to about 12% at 15 m depth). The models of Hakanson, Rowan et al., Blais and Kalff, and Carper and Bachmann yielded very different predicted critical depths for accumulation (10.5–22.8 m) and areas of accumulation (0–49.5%). Hakanson’s dynamic ratio model more reasonably reproduced the observed zone of elevated organic C concentrations in the Salton Sea than either exposure- or slope-based equations. Wave theory calculations suggest that strong winds occurring less than 1% of the time are sufficient to minimize accumulation of organic matter in sediments that lie at depths less than 9 m in this system. Guest editor: S. H. Hurlbert The Salton Sea Centennial Symposium. Proceedings of a Symposium Celebrating a Century of Symbiosis Among Agriculture, Wildlife and People, 1905–2005, held in San Diego, California, USA, March 2005     

The effect of divalent metals and laminar shear on the formation of large freshwater aggregates

Aquatic sediment from Hamilton Harbor were suspended under controlled Couette shear to measure the changes in particle size distribution when the bulk concentration of divalent cations Cd²⁺, Cu²⁺, Ni²⁺ and Zn²⁺ was increased 500 ppb above ambient values. The size distribution of particles followed a bimodal distribution, at diameters of 20 and 200 m, and was modeled with a curvilinear collision model, using a logarithmic size scale to compensate for the decreasing density of larger aggregates. Although collision frequencies decreased with particle size, there was a limit (160 m) above which shear no longer affected collision. Addition of divalent metals caused formation of non-porous large aggregates greater than 300 m, at shears lower than 3 dynes cm^–2. The sharp increase in aggregate volume that resulted from metal addition indicated that a partitioning threshold exists in the harbor, coinciding with an imaginary line along the shore, where wind driven agitation causes a bottom shear of 3 dynes cm^–2. This threshold can be visualized as the area near shore where bottom sediments consist of sands with nominal size greater than 250 m. Calculations, using Stoke's settling, predict settling of large aggregates near thermocline depth, coincident with the appearance of fine clays on the sediment surface.     

Content of Plant Pigments in the Bottom Sediments of the Water Bodies of Vietnam

Data on the content of plant pigments in the bottom sediments (BSs) of the water bodies of Central and South Vietnam are given for the first time. The average concentration of chlorophyll a and phaeopigments (Chl + Ph) in total reaches up to 3.9 μg/g dry matter in rivers, 5.6 in ponds, 13.8 in sand quarries, 56.8 in reservoirs, and 245 in lakes. Most frequently, the concentrations of Chl + Ph in the coastal zones of watercourses and water bodies fall in the oligotrophic category, and those in the central areas are in the hypertrophic category. Relationships between concentrations of Chl + Ph and water depth, content of oxygen near the bottom, moisture content, volumetric mass, and concentrations of organic matter (OM) in the BSs are found. The content of sedimentary pigments in tropical waters of Vietnam is similar to that in freshwater ecosystems of temperate latitudes, despite the substantial differences of climatic zones in temperature and light regimes.     

Sulphate,dissolved organic carbon,nutrients and terminal metabolic products in deep pore waters of an intertidal flat

This study addresses deep pore water chemistry in a permeable intertidal sand flat at the NW German coast. Sulphate, dissolved organic carbon (DOC), nutrients, and several terminal metabolic products were studied down to 5 m sediment depth. By extending the depth domain to several meters, insights into the functioning of deep sandy tidal flats were gained. Despite the dynamic sedimentological conditions in the study area, the general depth profiles obtained in the relatively young intertidal flat sediments of some metres depth are comparable to those determined in deep marine surface sediments. Besides diffusion and lithology which control pore water profiles in most marine surface sediments, biogeochemical processes are influenced by advection in the studied permeable intertidal flat sediments. This is supported by the model setup in which advection has to be implemented to reproduce pore water profiles. Water exchange at the sediment surface and in deeper sediment layers converts these permeable intertidal sediments into a “bio-reactor” where organic matter is recycled, and nutrients and DOC are released. At tidal flat margins, a hydraulic gradient is generated, which leads to water flow towards the creekbank. Deep nutrient-rich pore waters escaping at tidal flat margins during low tide presumably form a source of nutrients for the overlying water column in the study area. Significant correlations between the inorganic products of terminal metabolism (NH₄ ⁺ and PO₄ ³⁻) and sulphate depletion suggest sulphate reduction to be the dominant pathway of anaerobic carbon remineralisation. Pore water concentrations of sulphate, ammonium, and phosphate were used to elucidate the composition of organic matter degraded in the sediment. Calculated C:N and C:P ratios were supported by model results.     

Effectiveness of benthic foraminiferal and coral assemblages as water quality indicators on inshore reefs of the Great Barrier Reef, Australia

Although the debate about coral reef decline focuses on global disturbances (e.g., increasing temperatures and acidification), local stressors (nutrient runoff and overfishing) continue to affect reef health and resilience. The effectiveness of foraminiferal and hard-coral assemblages as indicators of changes in water quality was assessed on 27 inshore reefs along the Great Barrier Reef. Environmental variables (i.e., several water quality and sediment parameters) and the composition of both benthic foraminiferal and hard-coral assemblages differed significantly between four regions (Whitsunday, Burdekin, Fitzroy, and the Wet Tropics). Grain size and organic carbon and nitrogen content of sediments, and a composite water column parameter (based on turbidity and concentrations of particulate matter) explained a significant amount of variation in the data (tested by redundancy analyses) in both assemblages. Heterotrophic species of foraminifera were dominant in sediments with high organic content and in localities with low light availability, whereas symbiont-bearing mixotrophic species were dominant elsewhere. A similar suite of parameters explained 89% of the variation in the FORAM index (a Caribbean coral reef health indicator) and 61% in foraminiferal species richness. Coral richness was not related to environmental setting. Coral assemblages varied in response to environmental variables, but were strongly shaped by acute disturbances (e.g., cyclones, Acanthaster planci outbreaks, and bleaching), thus different coral assemblages may be found at sites with the same environmental conditions. Disturbances also affect foraminiferal assemblages, but they appeared to recover more rapidly than corals. Foraminiferal assemblages are effective bioindicators of turbidity/light regimes and organic enrichment of sediments on coral reefs.     

Biogeochemical evolution of a sulfur-iron rich aquatic system in a reflooded wetland environment (Lake Agmon,northern Israel)

Major biogeochemical processes in the newly created, shallow Lake Agmon (Hula Valley, northern Israel) were investigated from 1994 to 1996. Sediment cores, lake water and porewater were analyzed for chemical composition and spatial distribution. Sediment analyses revealed that Lake Agmon has two different sediment types: peat sediments in the northern and central parts, and marls in the southern part. The basic composition of the lake's water was controlled mainly by the mixing of two distinct water types (Jordan River and water drainage), and by evaporation. About 3/4 of the lake water originated from the Jordan Inlet, a quarter through the Z Canal Inlet (peat drainage) and a minor amount from groundwater seepage. Lake Agmon is unique among freshwater wetlands owing to its high SO ₄ ^2– content, which is ca. 1/3 that of sea water. This characteristic is ascribed to the dissolution of secondary gypsum, formed in the peat soils since the drainage of the historic Hula Marsh. Leaching gypsum from the shallow sediments during the first few months after flooding was followed by a later stage of constant diffusion and advection of SO ₄ ^2– from gypsum dissolution in deeper sediments. Gypsum dissolution in lake sediments contributed ca. half of the SO₄ ^2– and Ca²⁺ inputs to the lake. The concomitant increase of Ca²⁺ combined with alkalinity release due to organic matter decomposition in the sediments led to the precipitation of CaCO₃. This precipitation was enhanced by photosynthesis, particularly during summers, and consumed about a tenth of the Ca²⁺ and third of the alkalinity outputs from the lake. Iron-hydroxide was the main agent for microbial oxidation of organic matter, surpassing by far the role of sulfate, nitrate and manganese as electron acceptors. The produced Fe²⁺ was transported upward by diffusion and advection and oxidized to ferric iron at the sediment-water interface. There is evidence, however, that some sulfate was reduced, but most of the produced sulfide reacted with ferrous iron and accumulated in the sediments as FeS minerals. Therefore, despite high sulfate concentrations, the high iron availability restricted release of toxic sulfides into the water and thereby served to maintain reasonable water quality.     

The dark side of the hyporheic zone: depth profiles of nitrogen and its processing in stream sediments

1. Although it is well known that sediments can be hot spots for nitrogen transformation in streams, many previous studies have confined measurements of denitrification and nitrate retention to shallow sediments (<5 cm deep). We determined the extent of nitrate processing in deeper sediments of a sand plains stream (Emmons Creek) by measuring denitrification in core sections to a depth of 25 cm and by assessing vertical nitrate profiles, with peepers and piezometers, to a depth of 70 cm. 2. Denitrification rates of sediment slurries based on acetylene block were higher in shallower core sections. However, core sections deeper than 5 cm accounted for 68% of the mean depth‐integrated denitrification rate. 3. Vertical hydraulic gradient and vertical profiles of pore water chloride concentration suggested that deep ground water upwelled through shallow sediments before discharging to the stream channel. The results of a two‐source mixing model based on chloride concentrations suggested that the hyporheic zone was very shallow (<5 cm) in Emmons Creek. 4. Vertical profiles showed that nitrate concentration in shallow ground water was about 10–60% of the nitrate concentration of deep ground water. The mean nitrate concentrations of deep and shallow ground water were 2.17 and 0.73 mg NO₃‐N L^?1, respectively. 5. Deep ground water tended to be oxic (6.9 mg O₂ L^?1) but approached anoxia (0.8 mg O₂ L^?1) after passing through shallow, organic carbon‐rich sediments, which suggests that the decline in the nitrate concentrations of upwelling ground water was because of denitrification. 6. Collectively, our results suggest that there is substantial nitrate removal occurring in deep sediments, below the hyporheic zone, in Emmons Creek. Our findings suggest that not accounting for nitrate removal in deep sediments could lead to underestimates of nitrogen processing in streams and catchments.     

Biogeochemical processes in the groundwater discharge zone of urban streams

The influence of biogeochemical processes on nitrogen and organic matter transformation and transport was investigated for two urban streams receiving groundwater discharge during the dry summer baseflow period. A multiple lines of evidence approach involving catchment-, and stream reach-scale investigations were undertaken to describe the factors that influence pore water biogeochemical processes. At the catchment-scale gaining stream reaches were identified from water table mapping and groundwater discharge estimated to be between 0.1 and 0.8 m³ m^?2 d^?1 from baseflow analysis. Sediment temperature profiles also suggested that the high groundwater discharge limited stream water infiltration into the sediments. At the stream reach-scale, dissolved organic carbon (DOC) and dissolved organic nitrogen (DON) concentrations were higher in stream water than in groundwater. However, DOC and DON concentrations were greatest in sediment pore water. This suggests that biodegradation of sediment organic matter contributes dissolved organic matter (DOM) to the streams along with that delivered with groundwater flow. Pore water ammonium (NH₄ ⁺) was closely associated with areas of high pore water DOM concentrations and evidence of sulfate (SO₄ ^2?) reduction (low concentration and SO₄:Cl ratio). This indicates that anoxic DOM mineralization was occurring associated with SO₄ ^2? reduction. However the distribution of anoxic mineralization was limited to the center of the streambed, and was not constrained by the distribution of sediment organic matter which was higher along the banks. Lower sediment temperatures measured along the banks compared to the center suggests, at least qualitatively, that groundwater discharge is higher along the banks. Based on this evidence anoxic mineralization is influenced by groundwater residence time, and is only measurable along the center of the stream where groundwater flux rates are lower. This study therefore shows that the distribution of biogeochemical processes in stream sediments, such as anoxic mineralization, is strongly influenced by both the biogeochemical conditions and pore water residence time.     

盖度与冠层水深对沉水植物水盾草光谱特性的影响

遥感技术可应用于大尺度实时监测沉水植物的分布与生长状况。然而沉水植物的光谱特征受其冠层在水下深度的影响,从而影响湖泊和河流中沉水植物的遥感影像解译与信息提取。应用地物光谱仪,通过野外原位测定和室外控制试验,实测了沉水植物水盾草(Cabomba caroliniana)群落冠层在水下不同深度的反射光谱,分析了冠层水深对水盾草反射光谱的影响,并建立了基于光谱反射率和冠层水深的水盾草群落盖度反演模型。研究结果表明(1)不同盖度的水盾草群落光谱反射率的基本特征主要体现在绿光和近红外波段;(2)水盾草群落的光谱反射率与冠层水深基本呈负相关,相同盖度水盾草群落的光谱反射率随冠层水深的增加而减小,在近红外波段尤其明显;(3)水盾草群落冠层水深越小,其盖度与光谱反射率的相关性越强,且水盾草群落盖度越大,其光谱反射率与冠层水深的相关性越显著;(4)水盾草光谱反射率与盖度相关的最佳波段在692—898 nm,与冠层水深相关最佳的波段在710 nm和806 nm附近;(5)在710 nm和806 nm处建立的结合冠层水深的修正模型,无论是回归方程决定系数(R2),还是水盾草群落盖度的反演精度都明显高于仅用光谱反射率反演盖度的简单模型,因此可有效减除冠层水深对反演精度的影响。本研究的结果可为遥感监测沉水植物的分布和动态变化,以及沉水植物生物物理参量反演提供科学依据。