Characterization of Communities of Heterotrophic Bacteria Associated with Healthy and Diseased Corals in Nha Trang Bay (Vietnam)

A comparative investigation of the heterotrophic microflora of 11 species of healthy corals and of white-band-diseased and yellow-band-diseased corals inhabiting the reefs of Nha Trang Bay (Vietnam), which has been exposed to anthropogenic impact, was performed. Fifty-nine strains of heterotrophic bacteria isolated on Y/K and Endo media were investigated and characterized. All the isolates were identified at the genus level by consideration of the results of analysis of their phenotypic properties, determination of the molar percent of G+C bases in their DNA, and the composition of the fatty acids of lipids. In the composition of the microflora of tissues of healthy corals, γ-proteobacteria prevailed, with halomonads being dominant among them. In addition, the gram-negative bacteria included Pseudomonas and Vibrio spp., members of the Cyto-phaga-Fla-vobacterium-Bacteroides (CFB) phylogenetic cluster, and Moraxella sp. The gram-positive bacteria revealed included Bacillus, Staphylococcus, Halococcus, and Micrococcus spp., and coryneform bacteria. In the composition of the microflora of the tissues of affected corals, bacteria of the family Enterobacteriaceae and of the genera Planococcus and Arthrobacter, which were not revealed in healthy hydrobionts, were found. The anthropogenic impact is not the sole factor determining the infection of corals.     

Temporal dynamics of coral reef fish communities in Nha Trang Bay marine protected area,South-Central Vietnam

To improve understanding of reef fish communities of Vietnam’s first dedicated marine protected area, visual censuses were conducted seasonally from 2003–05 in Nha Trang Bay, south-central Vietnam using SCUBA. Results from this study show that species richness were usually higher in summer than winter and that decreased from summer to winter in both shallow and deep areas in this MPA, but this apparent decrease was not significant. There were significant variations in density of reef fish communities between seasons with higher densities in summer (from April to September) and lower densities in winter (from October to March). The families contributing most to the higher density during summer in the 3 years were acanthurids, chaetodontids, labrids, pomacentrids, scarids, siganids, pomacanthids and caesionids. The increased density of these families in summer was mostly due to increases of juveniles. Recruitment of acanthurids, chaetodontids, labrids, pomacentrids, scarids and siganids occurred primarily in shallow waters whereas caesionids and pomacanthids were mainly recruiting in deeper areas. There were no differences in spatial variations in both species richness and density within the same time periods over several years.     

Algal fouling of underwater structures at lobster farms in Nha Trang Bay (Vietnam)

The species composition and structure of algal fouling communities on the underwater artificial substrates at lobster farms in Nha Trang Bay (Vietnam) were studied for the first time. In total, 126 taxa (species and forms) of macroalgae (24% green, 16% brown, and 60% red), as well as eight species of cyanobacteria, were found. Depending on the area and quality of the substrate, fouling algae form polydominant turf communities, mono- and bidominant communities of crustose algae, or no specific communities. The flora of macroalgal fouling at lobster farms in Nha Trang Bay was similar in terms of its diversity and species composition to that of coral reefs in areas of the Indo-Pacific with a low level of pollution. This similarity might be due to the diversity and cleanness of the substrates (the absence of sediment on the surface of the underwater structures).     

A New Species Nemipterus (Nemipteridae) from Nha Trang Bay (Vietnam,South China Sea)

Journal of Ichthyology - From the coast of Vietnam, Nemipterus biendongensis sp. n. has been described, similar in body proportions to N. balinensoides, but differing from this species in a...     

Distribution and factors influencing on structure of reef fish communities in Nha Trang Bay Marine Protected Area, South-Central Vietnam

Visual censuses of coral reef fishes in Nha Trang Bay Marine Protected Area (MPA) were conducted during September–October 2005. Nha Trang Bay MPA is relatively rich in reef fishes compared to other areas in Vietnam and the Pacific Ocean outside the ‘Coral Triangle,’ consistent with its biogeographic location in the western South China Sea. A total of 266 species of 40 families of coral reef fishes formed five distinct assemblages. Spatial variations in distribution and structure of the assemblages were associated with eight significant biological and physical variables which were cover of living hard corals, encrusting corals, branching corals, Acropora, Millepora, Montipora, depth and distance from the coast of the mainland. The six factors in front are likely related to provision of shelter and nutrition, while the distance factor is likely to represent a gradient in disturbance and impacts from various mainland sources including sedimentation and pollution discharge from nearby rivers. Local species richness ranged from 35 to 70 species 500 m⁻² (mean: 51 ± 2 SE) for reef flat stations and from 23 to 68 species 500 m⁻² (mean: 48 ± 4 SE) for reef slope stations. Total species richness at each site averaged 76 species (±4 SE), ranging from 56 to 110 species, dominated by wrasses, damselfishes, butterflyfishes, parrotfishes, surgeonfishes, groupers and goatfishes. Density of total fishes at each station ranged from 348 to 1,444 individuals 500 m⁻² (mean: 722 ± 302 SE) for the reef flat stations and from 252 to 929 individuals 500 m⁻² (mean: 536 ± 215.7 SE) for the reef slope stations. Overall mean density at each site averaged 628.9 (±238.4 SE) individuals 500 m⁻². The highly protected sites supported higher mean density of fishes per site (ranged: 904.5–1,213 individuals 500 m⁻² for Hon Mun and 1,167.5 individuals 500 m⁻² for Hon Cau) compared to other sites (<800 individuals 500 m⁻²). Of the families included in the census, densities were dominated throughout the MPA by damselfishes and wrasses. Many target species, particularly groupers, snappers and emperors, were rare or absent and the low abundance of big fishes was consistent with over-harvesting. Similarly a low density of butterfly fishes and angelfishes is likely related to the supply for marine aquaria in Vietnam and overseas. This study provides an important baseline against which the success of present and future MPA management initiatives may be assessed.     

Gurnards of the Genus Pterygotrigla (Triglidae) of Nha Trang Bay and Adjacent Waters (Vietnam,South China Sea)

Journal of Ichthyology - An overview of the species of gurnards of the genus Pterygotrigla, found in Nha Trang Bay and the adjacent water area of the South China Sea (south of Central Vietnam) has...     

Viral communities associated with healthy and bleaching corals

The coral holobiont is the integrated assemblage of the coral animal, its symbiotic algae, protists, fungi and a diverse consortium of Bacteria and Archaea . Corals are a model system for the study of symbiosis, the breakdown of which can result in disease and mortality. Little is known, however, about viruses that infect corals and their symbionts. Here we present metagenomic analyses of the viral communities associated with healthy and partially bleached specimens of the Caribbean reef-building coral Diploria strigosa . Surprisingly, herpes-like sequences accounted for 4–8% of the total sequences in each metagenome; this abundance of herpes-like sequences is unprecedented in other marine viral metagenomes. Viruses similar to those that infect algae and plants were also present in the coral viral assemblage. Among the phage identified, cyanophages were abundant in both healthy and bleaching corals and vibriophages were also present. Therefore, coral-associated viruses could potentially infect all components of the holobiont – coral, algal and microbial. Thus, we expect viruses to figure prominently in the preservation and breakdown of coral health.     

Present-Day State of Coral Reefs of Nha Trang Bay (Southern Vietnam) and Possible Reasons for the Disturbance of Habitats of Scleractinian Corals

Our investigations were conducted from 1990 to 2002. Sampling of bottom sediments and biological objects, as well as photo and video shooting, were performed during scuba diving. The state of the environment and coral reef communities was assessed using the chemical–analytical, fluorometric, and luminometric methods, as well as the Ames test and the transect technique. The research results suggest that the spectrum and distribution pattern of persistent congeners of PCDD/Fs (dioxins) in bottom sediments are similar to those of the defoliant Agent Orange and that the bottom sediments are toxic and display photo inhibition and a mutagenic effect. The bottom of the bay is heavily silted throughout its depth. Many large dead colonies of corals without mechanical damage were observed everywhere. The total coverage by live corals in all sites investigated does not exceed 30%. Although, without a doubt, many factors contributed much to the disturbance of the bay ecosystems, the actual trigger for the degradation of the coral reefs seems to be the input of dioxin-containing chemicals used as defoliants during the American–Vietnamese war (Vietnam War).     

Anomalous Behavior of Free-Swimming Echeneis naucrates (Echeneidae) in the Aquaculture Areas of Nha Trang Bay (South China Sea,Southern Central Vietnam)

Journal of Ichthyology - The results of observations of the behavior of free-swimming sharksuckers Echeneis naucrates in a prosperous ecosystem (Maldives, Indian Ocean) and in the areas exposed to...     

Annotated checklist of species of the family pomacanthidae (Actinopterygii,Perciformes) from the Nha Trang Bay (South China Sea,Central Vietnam)

Angelfishes (Fam. Pomacanthidae) of the Nha Trang Bay (Central Vietnam) are reviewed. Fourteen species of pomacanthids belonging to six genera (Apolemichthys, Centropyge, Chaetodontoplus, Genicanthus, Pomacanthus, and Pygoplites) are recorded in the bay. All species are identified on preserved material. Two new species for the bay are found: Centropyge bispinosa and C. heraldi. C. herald is new species for coastal waters of Continental Vietnam and of adjacent areas. For all pomacanthid species of the bay, areas are described, brief diagnostic characteristics are supplied, and distribution by biotopes and depths is indicated based on data of underwater observations.     

Taxonomic composition of bacteria associated with cultivated mollusks Crassostrea lugubris and Perna viridis and with the water of the Gulf of Nha Trang Lagoon, Vietnam

One hundred and four strains of heterotrophic bacteria have been isolated and characterized from two species of bivalve mollusks cultivated in the Gulf of Nha Trang (Vietnam) and from the water of a mariculture farm. The isolates have been identified on the basis of morphological, physiological, biochemical, and chemotaxonomic properties, as well as by the content of G+C bases in DNA. In the microflora of mollusks, Vibrio alginolyticus was predominant; the pathogenic species V. harveyi and V. splendidus were found as well. Staphylococci and bacilli occupied the second place in abundance after vibrios. In addition, coryneforms and enterobacteria, as well as Pseudomonas spp. and Pseudoalteromonas spp., were revealed. The composition of the water microflora was more diverse as compared with the microflora of mollusks. In the water, Bacillus spp., Vibrio spp., and Pseudomonas spp. were predominant. Brevibacterium spp. and other coryneform bacteria, as well as enterobacteria, occurred in significant amounts. In addition, Pseudoalteromonas spp., Marinococcus sp., Halobacillus sp., Shewanella sp., Sulfitobacter sp., and bacteria of the CFB cluster were noticed. The presence of pathogenic and conditionally pathogenic bacterial species in the water and mollusks is probably the reason for the high death rate of cultivated animals at the mariculture farm.     

Metal concentrations in Sargassum algae from coastal waters of Nha Trang Bay (South China Sea)

The concentrations of metals, viz., Fe, Mn, Cu, Zn, Cd, Pb, and Ni, were investigated in brown algae of the genus Sargassum collected in the coastal waters of Nha Trang Bay (South China Sea). Metal concentrations in algae growing in the zone of influence of the city of Nha Trang were higher than those in macrophytes collected to the south and north of the city. Similar levels of Cu and Fe concentrations were observed in macrophytes from the urbanized coastal areas of Nha Trang Bay and in algae from the Peter the Great Bay (Sea of Japan). This is suggestive of comparable metal inputs from the anthropogenic sources of the cities of Nha Trang and Vladivostok (Peter the Great Bay). However, the concentrations of Pb, Ni, and Cd in algae from the coastal waters of Nha Trang Bay were lower than in macrophytes from the inshore zone of Vladivostok. The high level of pollution of sea water with Zn compounds near Nha Trang was local. The metal levels in macrophytes from background areas reflect the geochemical features of the environment. Sargassum algae from Nha Trang Bay had lower concentrations of Zn, Cd, and Ni and higher concentrations of Mn than algae from Peter the Great Bay. The background concentrations of Cu, Pb, and Fe in macrophytes from both bays were virtually the same.     

Additions to the Gobioidei Fauna of Nha Trang and Phan Thiet Bays (South China Sea,Vietnam)

Journal of Ichthyology - Information is provided on new specimens of the recently described Amblyeleotris memnonia species (Gobiidae), previously known only by its holotype. The absence of...     

Gobies (Gobioidei) of soft bottoms from Nha Trang and Van Phong bays (South China Sea,Vietnam)

Gobioid fishes collected in Nha Trang and Van Phong bays (Vietnam) represented by 44 species, including 30 species continuously associated with soft bottoms in the open parts of the bays with normal marine conditions are reviewed. A new species, Navigobius khanhoa sp. n., is described. This species differs from other species of the genus in much higher number of rays in the second dorsal fin (26), smaller size of the mouth, teeth on the jaws arranged in a single row, and other characters. Four species from the genera Acentrogobius, Eviota, Favonigobius, and Gnatholepis have not been identified to the species, and, most likely, some of them are new for science. Nine species are recorded in the fauna of Vietnam for the first time: Aulopareia unicolor, Bathygobius hongkongensis, Egglestonichthys bombylios, Glossogobius circumspectus, Oplopomops diacanthus, Oxyurichthys auchenolepis, Tomiyamichthys ex gr. russus, Tryssogobius porosus, and Valenciennea immaculata. An occurrence of Glossogobius olivaceus in the fauna of Vietnam is confirmed. Three species, G. olivaceus, Oligolepis acutipennis, and Periophthalmus kalolo, are recorded in the Cai River delta for the first time. A new synonymy is established: Eviota gurjanovae (Prokofiev, 2007) = E. prasina (Klunzinger, 1871). The current state of knowledge of Gobiidae fauna of Vietnam is discussed, and the updating of the species composition of Gobiodontini of Nha Trang Bay is presented in addition to the species list published earlier (Prokofiev, 2007).     

Changes in the composition and structure of coral communities of Mju and Moon islands, Nha Trang Bay, South China Sea

In October 2003 and January 2005, comparative observations were made on the reefs of Mju and Moon islands near the city and port of Nha Trang, which we first investigated in 1981. Appreciable changes due to anthropogenic impact have occurred on the reefs that are the nearest to the city. There was a reduction in substrate cover by reef-building corals, a substitution of dominant scleractinian species, and a decrease in the numbers and diversity of common species of corallobionts. The index of species diversity for scleractinians also decreased. The seaweeds Chnoospora and Halimeda spread into all zones of the reefs. Changes in coral communities on more distant and protected reefs were not so marked.