Panbiogeographical analysis of the shark genus Rhizoprionodon (Chondrichthyes,Carcharhiniformes, Carcharhinidae)

The distributional patterns of the seven species of Rhizoprionodon were analysed using the panbiogeographical method of track analysis. The individual tracks of Rhizoprionodon suggest that the genus is mainly an Indian–Atlantic Ocean group. Five generalized tracks were found: (1) Caribbean, defined by R. porosus and R. terraenovae; (2) eastern coast of South America, defined by R. porosus and R. lalandei; (3) Indian Ocean, defined by R. acutus and R. oligolinx; (4) north‐western Australia, defined by R. acutus, R. oligolinx and R. taylori; (5) north‐north‐eastern Australia, defined by R. acutus and R. taylori. Only R. longurio was not included in any generalized track, and its distribution is restricted to the eastern Pacific Ocean. Two biogeographical nodes were found at the intersection of the generalized tracks 1 and 2 (Caribbean Sea) and generalized tracks 4 and 5 (north Australia). The generalized tracks overlap with those found in several unrelated marine taxa. Overall, the generalized tracks are associated with warm currents. The biogeographical nodes found (Caribbean and Australian) are coincident with the global distribution of mangroves.     

Phylogeography and genetic population structure of Caribbean sharpnose shark <Emphasis Type="Italic">Rhizoprionodon porosus</Emphasis>

Sharks of the genus Rhizoprionodon are among the most important predators along the coastal marine ecosystems, and they represent an important economic resource for the small-scale fisheries. To properly manage and conserve exploited shark species, detailed analyses of their population structure are needed. To evaluate the gene flow and levels of the genetic diversity among populations of the Caribbean sharpnose shark R. porosus, we identified the nucleotide sequence based on collections (n = 321 specimens) from 10 different areas, including the Caribbean Sea and several locations along the entire Brazilian coast. The analysis of 802 nucleotides from the mitochondrial DNA control region revealed 53 distinct haplotypes. The majority of these haplotypes were restricted to their collection locales with a significant genetic structure detected among the overall populations (Φ _ST  = 0.237, P < 0.0001). The data suggest a population division with two distinct management units in the western Atlantic. These management units are likely separated by the Equatorial Current. The strong population structure in R. porosus indicates that regional populations, if depleted, will not recover swiftly through immigration.     

Antarctic associations: the parasitic relationship between the gastropod <Emphasis Type="Italic">Bathycrinicola tumidula</Emphasis> (Thiele, 1912) (Ptenoglossa: Eulimidae) and the comatulid <Emphasis Type="Italic">Notocrinus virilis</Emphasis> Mortensen, 1917 (Crinoidea: Notocrinidae) in the Ross Sea

The first case of parasitic association between an eulimid mollusc (Gastropoda, Ptenoglossa) and a comatulid (Echinodermata: Crinoidea) is reported for Antarctica. The mollusc involved in the association is Eulima tumidula Thiele, 1912, which has now been ascribed to the genus Bathycrinicola Bouchet & Warén, 1986, never recognized before in Antarctica. This genus is present only in the NE Atlantic Ocean and the Mediterranean Sea, and encompass species which are specific parasites of the sessile stalked crinoids of the family Bathycrinidae. However, in Antarctica, Bathycrinicola tumidula (Thiele, 1912) exploits the endemic vagile comatulid Notocrinus virilis Mortensen, 1917, and attains the largest known dimensions (∼1 cm) for a Bathycrinicola species. The absence of suitable Bathycrinidae host in modern Antarctic benthic assemblages, as well as the long paleontological history of the genus Notocrinus in Antarctica, suggest a possible ‘host-switch’ phenomenon. This event could reasonably have occurred when many species underwent considerable bathymetric shifts, during the dramatic climatic changes that affected Antarctica.     

New species of the genus <Emphasis Type="Italic">Bathycongrus—B. parviporus</Emphasis> (Congridae,Anguilliformes)—from waters of Central Vietnam (Nha Trang and Van Phong Bays)

Bathycongrus parviporus sp. nova is described from specimens collected in the South China Sea, in the coastal waters of central Vietnam. By its characters (short snout, elongate-oval vomerine tooth patch with numerous small teeth of approximately the same size, slender relatively short tail, and residual leptocephalic pigmentation as a series of small melanophores just below lateral line in adults), the species belongs to the group of species of this genus represented by B. bleekeri, B. trimaculatus, and B. unimaculatus in the western part of the Pacific Ocean and B. dubius in the western Atlantic Ocean but differs in small infraorbital pores which are enlarged in all known species of the genus Bathycongrus. By the number of preanal pores, the new species is similar to B. bleekeri from Philippine waters but differs from it in a higher number of vertebrae (120–122), in more numerous rows of teeth on the premaxilloethmoid, in more number of branchiostegal rays (9–10), a shorter head, and in some other proportions of head and body. Topography of canals and pores of the cephalic seismosensory system of B. parviporus sp. nova is described. Morphometric and osteological characters for placing this species in the genus Bathycongrus are noted.     

A new species of <Emphasis Type="Italic">Penopus</Emphasis> (Teleostei: Ophidiidae) from the Ryukyu Trench,the West Pacific,with remarks on <Emphasis Type="Italic">Penopus microphthalmus</Emphasis>

The bathyal genus Penopus (Ophidiidae) is revised based on 23 specimens. One specimen from the Ryukyu Trench represents a new species, Penopus japonicus. The remaining 22 specimens were found on both sides of the Atlantic Ocean, and neither 28 meristic and morphometric characters nor several morphological characters show any differences between the two populations. This supports Séret (1988), who considered Penopus macdonaldi Goode and Bean 1896 a junior synonym of Penopus microphthalmus (Vaillant 1888). The new Japanese species can be separated from the Atlantic species by having fewer rays in the dorsal (117 vs. 135–158) and anal (89 vs. 106–122) fins, the squamation of the head restricted to the middle part of the preopercle versus the squamation covering the dorsum, preopercle and the opercle in part, a distinct spine behind the posterior nostril versus the spine hardly visible and 9 spines on the hind margin of the preopercle versus 4–7 spines.     

Revision of the genus <Emphasis Type="Italic">Melamphaes</Emphasis> (Melamphaidae): Part 3. Multirakered species: <Emphasis Type="Italic">M. suborbitalis,M. parini</Emphasis>, and <Emphasis Type="Italic">M. acanthomus</Emphasis>

In the third part of the revision of the genus Melamphaes Melamphaidae (Melamphaidae), we examine multirakered species (20 and more rakers at the first gill arch) with seven soft rays in the ventral fin that have a posttemporal (temporal) spine directed anteriorly-upwards, with 14–15 rays in the pectoral fin, and 11 (rarely 12) trunk vertebrae. M. suborbitalis inhabits the Atlantic Ocean (in the north up to 57°N, in the south, up to 40°S), the Indian Ocean (is known in its southwestern part), and the western part of the Pacific Ocean. There is no significant evidence on catches of this species in the eastern part of the Pacific Ocean. Apparently, M. suborbitalis is absent in the tropical waters of the oceans. Until recently, M. parini was known from the holotype caught in the Sea of Okhotsk. Two specimens of this rare species: from the central (the area of the Hawaiian Islands) and the northeastern part of the Pacific Ocean are reported. M. acanthomus is an endemic of the eastern part of the Pacific Ocean where it is known along the coasts of America from California to the northern coast of Chile (approximately between 33°N and 21°S).     

Multiple substitutions and reduced genetic variability in sharks

The present study analyzed the genetic variability of the populations of four shark species (Carcharhinus limbatus, Carcharhinus porosus, Rhizoprionodon porosus, and Sphyrna tudes) from the Atlantic coast of the Amazon region. The analyses were based on the sequencing of the mitochondrial Control Region and Cytochrome b gene. S. tudes presented reduced diversity for both markers, which may be related to overexploitation by local fisheries. Most of the genetic variation in the four species was found in the 5′ portion of the Control Region, corresponding to a region of 210 bps, characterized by multiple substitutions (mutational hotspots) at the same sites. These mutations clearly biased the genetic diversity and affected the reliable of the analyses based exclusively on the Control Region. As Cytochrome b was not affected by these mutational events, this marker provided more reliable parameters for the evaluation of patterns of demographic expansion only for R. porosus. The present study indicated that the analysis of both markers is essential to guarantee the reliability of estimates of genetic variability, given that estimates based on the Control Region may be biased, and thus reduce the effectiveness of conservation and management measures designed to guarantee the long-term protection of stocks.     

Revision of the genus <Emphasis Type="Italic">Melamphaes</Emphasis> (Melamphaidae). 5. Oligo-raker species: <Emphasis Type="Italic">M. indicus</Emphasis>, <Emphasis Type="Italic">M. eurous</Emphasis>, and <Emphasis Type="Italic">M. typhlops</Emphasis>

Three oligo-raker species (?19 rakers on the first gill arch) of the genus Melamphaes out of the “M. typhlops” group are considered. The validity of M. indicus Ebeling is restored. This species inhabits equatorial and tropical waters of the Indian Ocean and the western part of the Pacific Ocean. M. eurous sp. n., which is related to M. indicus, is described from equatorial waters of the eastern part of the Pacific Ocean. M. typhlops (Lowe) inhabiting the northern part of the Atlantic Ocean, from the equatorial zone about to 45° N, is redescribed.     

REPORT OF A NEW INVASIVE ALGA IN THE ATLANTIC UNITED STATES: “HETEROSIPHONIA” JAPONICA IN RHODE ISLAND1

Recent collections of tetrasporangiate “Heterosiphonia” japonica Yendo from Watch Hill to Point Judith, Rhode Island, represent the first report of this nonnative alga in the western Atlantic. Native to the Pacific Ocean, this species was unintentionally introduced into European waters by 1984 and has subsequently invaded the eastern Atlantic Ocean widely from France to Norway and south into the Mediterranean Sea. Thus far, all western Atlantic collections of this species are confined to the outer coast of Rhode Island, and at present are not found in Narragansett Bay or in Long Island Sound along the Connecticut coast. Molecular and morphological studies confirm the identity of this newly introduced invasive species.     

Molecular assessment of the genetic integrity,distinctiveness and phylogeographic context of the Saltwater crocodile (<Emphasis Type="Italic">Crocodylus porosus</Emphasis>) on Palau

The saltwater crocodile (Crocodylus porosus) is the largest and most broadly distributed crocodilian species, and thus is of special conservation and economic interest. Similar to other parts of its range throughout the Indo-Pacific, C. porosus distributed in the Republic of Palau have experienced a severe population decline over the past century primarily due to commercial hunting and eradication campaigns. In addition, several thousand crocodiles of undocumented species and origin were imported into Palau during the 1930’s for commercial farming purposes, potentially polluting the gene pool of the endemic saltwater crocodiles. Analysis of 39 individuals collected throughout the Republic of Palau revealed a single mitochondrial DNA control region haplotype shared by populations sampled in Sulawesi, Borneo and Australia. The mtDNA results, in combination with microsatellite genotypic data at six loci, detected no evidence for inter-specific hybridization between endemic Palauan C. porosus and potentially introduced Crocodylus species. There was no evidence for a genetic bottleneck in the Palauan population, however an excess of rare alleles was identified, indirectly suggesting a recent history of admixture potentially linked to introductions of non-native C. porosus. Following from these findings, Palauan C. porosus should be included in the single ESU previously established for all saltwater crocodiles given the recovery of a fixed, but geographically widespread haplotype. Although Palauan C. porosus exhibited significant genetic differentiation relative to all other sampled populations, it’s delineation as a distinct management unit is precluded at the present time by evidence that the genetic integrity of the population may have been compromised by the introduction of non-native saltwater crocodiles.     

Molecular phylogeny of the deep‐sea penaeid shrimp genus Parapenaeus (Crustacea: Decapoda: Dendrobranchiata)

The commercial deep‐sea penaeid shrimp genus Parapenaeus contains 15 species, three subspecies and two forms in the Indo‐West Pacific and the Atlantic. Novel nucleotide sequence data from five different genes (COI, 16S, 12S, NaK and PEPCK) were collected to estimate phylogenetic relationships and taxonomic status amongst all but one subspecies in this genus. The phylogenetic results only support two of the four species groups previously proposed for this genus and indicate an evolution direction of the genital organs from simple to complex. The present results suggest that Parapenaeus originated in the shallow waters of the West Pacific with subsequent migration to the deep sea and the Atlantic. The molecular data reveal that there was probably misidentification of females between Parapenaeus australiensis and Parapenaeus ruberoculatus, with females previously assigned as P. australiensis likely being the females of P. ruberoculatus, while material identified as P. australiensis forma nodosa being the true P. australiensis females. On the other hand, Parapenaeus longipes forma denticulata truly represents a variation of the same species, while the subspecies Parapenaeus fissuroides indicus warrants a specific rank.     

Presence of Palaemon Macrodactylus Rathbun 1902 (Crustacea: Decapoda: Caridea: Palaemonidae) in Mar Del Plata Harbor, Argentina: First Record from Southwestern Atlantic Waters

Adults of the palaemonid prawn Palaemon macrodactylus Rathbun, 1902 were reported for the first time from the southwestern Atlantic waters. Males and ovigerous females were collected in Mar del Plata harbor (38°03′ S; 57°31′ W), Argentina; larvae obtained from one of the collected females were reared in the laboratory until the juvenile stage. The geographical range of P. macrodactylus was previously restricted to the Pacific Ocean: it was originally described in Japan and has been reported as an invasive species in the western coast of USA in the 1950’s and in Australia in the 1970’s. Recently, this prawn has been also reported from European waters.     

Effects of the Pleistocene on the mitochondrial population genetic structure and demographic history of the silky shark (<Emphasis Type="Italic">Carcharhinus falciformis</Emphasis>) in the western Atlantic Ocean

The silky shark, Carcharhinus falciformis, is a large-bodied, oceanic-coastal, epipelagic species found worldwide in tropical and subtropical waters. Despite its commercial importance, concerns about overexploitation, and likely ecological significance of this shark as an upper trophic-level predator, understanding of its population dynamics remains unclear for large parts of its distribution. We investigated the genetic diversity, population structure and demographic history of the silky shark along the western Atlantic Ocean based on the use of 707 bp of the mitochondrial DNA control region (mtCR). A total of 211 silky sharks were sampled, originating from five areas along the western Atlantic Ocean. The mitochondrial sequences revealed 40 haplotypes, with overall haplotype and nucleotide diversities of 0.88 (± 0.012) and 0.005 (± 0.003), respectively. The overall population structure was significantly different among the five western Atlantic Ocean regions. Phylogenetic analysis of mtCR sequences from globally sourced silky shark samples revealed two lineages, comprising a western Atlantic lineage and western Atlantic—Indo-Pacific lineage that diverged during the Pleistocene Epoch. In general, tests for the demographic history of silky sharks supported a population expansion for both the global sample set and the two lineages. Although our results showed that silky sharks have high genetic diversity, the current high level of overexploitation of this species requires long-term, scientifically informed management efforts. We recommend that fishery management and conservation plans be done separately for the two western Atlantic matrilineal populations revealed here.     

Marine mites (Halacaroidea: Acari): a geographical and ecological survey

Halacarid mites (Acari), with almost 700 species described, inhabit marine and freshwater habitats. The majority of genera are recorded from at least two ocean basins or continents. There is no evidence of endemic genera, in either littoral faunal provinces or in deep-sea regions. Copidognathus, a genus comprising 1/4 of all species described, is found in almost all geographic regions, depths and habitats. Other genera dominate or are restricted to cold waters, to warm waters or to distinct habitats.Corresponding habitats on either side of the boreal Atlantic Ocean harbour congeneric, identical, sibling or morphologically similar species. The fauna in the western Atlantic is less diverse than that in the eastern. Amphiatlantics are restricted to certain genera. Transatlantic distribution is independent of the niche inhabited.Of the marine halacarid species recorded from the boreal western Atlantic, 41% are amphiatlantics, while only one species is recorded from both the Caribbean and the Mediterranean. The Caribbean and the Mediterranean faunas are dominated by genera in which amphiatlantics are unknown.Most of the Black Sea species of the genus Halacarellus also occur in the Baltic, North Sea or North Atlantic, whereas the Copidognathus fauna of the Black Sea is similar to that of the Mediterranean.Halacarids are thought to be an ancient taxon, with most genera probably having been present since the Mesozoic and with several species having an age of at least 50 million years. Evidence for their antiquity is found in the distributional pattern of marine and limnic genera and species, in the lack of endemic genera despite low fecundity and lack of dispersal stages, and in the fact that amphiatlantics are restricted to certain genera without relationships to the niches inhabited.     

No longer a circumtropical species: revision of the lizardfishes in the Trachinocephalus myops species complex,with description of a new species from the Marquesas Islands

Trachinocephalus, a formerly monotypic and nearly circumtropical genus of lizardfishes, is split into three valid species. Trachinocephalus gauguini n. sp. is described from the Marquesas Islands and is distinguished from the two other species in the genus by having a shorter snout, a narrower interorbital space, larger eye and modally fewer anal‐fin and pectoral‐fin rays. The distribution of Trachinocephalus myops (type species) is restricted to the Atlantic Ocean and the name Trachinocephalus trachinus is resurrected for populations from the Indo‐West Pacific Ocean. Principal component analyses and bivariate plots based on the morphometric data differentiated T. gauguini from the other two species, but a substantial overlap between T. myops and T. trachinus exists. Phylogenetic evidence based on mtDNA COI sequences unambiguously supports the recognition of at least three species in Trachinocephalus, revealing deep divergences between the Atlantic Ocean, Indo‐West Pacific Ocean and Marquesas entities. Additional analyses of species delimitations using the generalized mixed Yule coalescent model and the Poisson tree processes model provide a more liberal assessment of species in Trachinocephalus, indicating that many more cryptic species may exist. Finally, a taxonomic key to identify the three species recognized here is provided.     

Systematic review of the genus <Emphasis Type="Italic">Bothrocara</Emphasis> Bean 1890 (Teleostei: Zoarcidae)

The systematics of the eelpout genus Bothrocara Bean 1890 is reviewed on the basis of 941 specimens. Eight mostly eurybathic, demersal species are recognized, distributed mainly along the continental slopes of the North and South Pacific oceans, with one species entering the South Atlantic. Distributions are: B. brunneum ranges from the Sea of Okhotsk to the Gulf of Panama at depths of 199–1,829 m; B. elongatum ranges from the Gulf of Panama to Chile at depths of 720–1,866 m; B. hollandi ranges from the Sea of Japan to the southeastern Bering Sea at depths of 150–1,980 m; B. molle ranges from the western Bering Sea to the South Atlantic at depths of 106–2,688 m; B. nyx is known only from the eastern Bering Sea at depths of 790–1,508 m; B. pusillum ranges from the northern Bering Sea to British Columbia, Canada, at depths of 55–642 m; B. tanakae is found along the northern coasts of Honshu and Hokkaido islands, Japan, at depths of 274–892 m; B. zestum ranges from the Izu Islands, Japan, and central Honshu, Japan, to the Gulf of Alaska at depths of 199–1,620 m (an unidentifiable specimen from off Taiwan may be B. zestum). The species are distinguished from one another mainly on the basis of head pore patterns, gill raker morphology, coloration and various meristic and morphometric values. A determination key to the species is provided.