Dietary composition of wildebeest (Connochaetes taurinus) kongoni (Alcephalus buselaphus) and cattle (Bos indicus), grazing on a common ranch in south-central Kenya

This paper gives the results of a study conducted at Game Ranching Ltd, situated at the Athi Kapiti Plains, Kenya, to determine the dietary composition of cattle (Bos indicus L), kongoni (Alcephalus buselaphus Pallas) and wildebeest (Connochaetes taurinus Burchell), through two forage growing seasons (wet and dry). The dietary preferences and overlaps between the species were also determined. The diet preference of the three herbivores was determined using a microhistological analysis technique. The three dominant grasses in the ranch: Themeda triandra Fork, Digitaria macroblephara (Hack.) Stapf and Penisetum mezianum Leeke, formed the major diets of the animals. The browse component of the diets increased during the dry season by about 100% for all the animal species, with cattle always having twice as much browse as the wild herbivores. However, the animals selected similar diets in terms of plant species during both seasons but were more selective during the wet season. Dietary overlaps were always above 75%, but more than this during the dry season. The dietary overlaps were lower between cattle and wild herbivores than between the wild herbivores. The diet preference index for the animals differed from season to season, and from plant to plant.     

Polymorphism of mitochondrial DNA (mtDNA) in cattle and buffaloes

Mitochondrial DNA (mtDNA) from two breeds of cattle, viz., [Hariana (Bos indicus), Holstein (Bos taurus)] and Indian water buffalo (Bubalis bubalus), was analyzed using 13 restriction endonucleases which recognized an average of about 40 six-base sites. Polymorphism among cattle was detected with six of these enzymes. The two Holstein differed at six sites, whereas the Hariana breed (Bos indicus) did not show any site polymorphism. Surprisingly, the Hariana type differed by only one site from one of the Holstein types. The total size of buffalo mtDNA was estimated to be 16.4 kb. Polymorphism within the Murrah buffalo breed was observed with respect to aBglI site. Scarcely any of the restriction fragments of buffalo mtDNA matched those of cattle mtDNA.     

Comparative analysis of methanogen diversity in the rumen of crossbred buffalo and cattle in the Philippines by using the functional gene mcrA

Comparative analyses of methanogen diversity in the rumen of crossbred buffalo and cattle fed the same diet in the Philippines was performed by cloning the methyl coenzyme M reductase A (mcrA) gene. The cattle and buffalo libraries consisted of 50 clones each. Comparative analysis of the amino acid sequence revealed that these 2 libraries differed significantly (P?<?0.01). The deduced amino acid sequences of the clones were classified into 9 operational taxonomic units (OTUs) in buffalo and 11 OTUs in cattle. Sequence similarity between the clones and known cultured methanogens ranged from 86 to 97?% for buffalo and 84 to 99?% for cattle. Methanobrevibacter species were predominant in buffalo (64?% of the clones), and an unknown mcrA was predominant in cattle (52?% of the clones). A large number of clones with low similarity to cultivated methanogens was observed in both buffalo and cattle, suggesting the presence of an unknown methanogen species in their rumen.     

Palatability factors and nutritive values of the food of buffaloes (Syncerus caffer) in Uganda

The food preferences of tame buffaloes grazing different vegetation types were recorded. The effects of fire and rainfall were investigated. By initiating a new growth cycle, fire altered the food habits of large herbivores and also the distribution of small mammals. Seasonal variations in the effect of rainfall on plant growth explains why preferences did not change in proportion to precipitation. The more important grasses were collected and their parts analysed physically and chemically. Their stem to leaf ratio is considered to have influenced the species eaten by coarse grazers such as buffalo. A broad correlation was obtained between buffalo preferences and the percentage green leaf of Hyparrhenia filipendula and Themeda triandra. This correlation was improved when preferences were compared with the number of grams green leaf carbohydrate per 100 g dry grass. There was a negative response to the silica present in dead leaves, but stem fibre appeared to have little effect on preferences. A grazing animal experiences a combination of attractants and repellants, i.e. green leaf carbohydrate and protein less stem fibre and dead leaf silica. Other palatability factors were noted, in particular tannins and oils in grasses of the tribe Andropogoneae. These may act as repellants, possibly only when the grazing animal has alternative vegetation from which to choose. The mineral content of grasses appeared to be adequate and calcium and phosphorus were present in about the required proportions. The observations support the belief that selective grazing enables a herbivore to consume a diet of significantly higher nutritive value than that of the average sward. Browsing and new growth after fire help compensate for the low nutritive value of pasture during the dry season. The nutritive value of the diet is considered to be the proximal factor in the seasonal cycle of reproduction of the buffalo and probably the ultimate factor in the reproduction of certain other ungulates and rodents.     

Seasonal variation in forages utilized by the African buffalo (Syncerus caffer) in the succulent thicket of South Africa

The succulent thicket of the Eastern Cape, South Africa, is characterized by densely wooded vegetation that is dominated by succulents with little understory of ephemeral and weakly perennial grasses and forbs. Studies have developed around the question: how do bulk grazers such as the African buffalo (Syncerus caffer) survive in the succulent thicket? In this study, the diet of the African buffalo at the Great Fish River Reserve (GFRR) was studied in two seasons (wet and dry). The diet profile was assessed from faecal matter, using the micro‐histological analysis method. During the wet season, grass species contributed 72% to the diet while 28% was contributed by browse species. In the dry season there was a significant increase in the intake of browse by 5% (χ² = 19.94, df = 11, P < 0.05). There were species that were neglected in the wet season but became principal dietary items in the dry season, these included Setaria neglecta, Cymbopogon plurinodis, Capparis sepiaria and Portulacaria afra. Diet quality, as estimated from faecal samples, suggested that the buffalo were nutritionally stable; however, the presence of sarcoptic mange in the buffalo suggests nutritional stress.     

Sequence of GDF 8 (Myostatin) Gene in Bubalus Bubalis

The sequence of myostatin gene (growth differentiation factor 8 [GDF 8]) in Indian riverine buffalo (Bubalus bubalis) is reported. The genomic DNA as well as mRNA were sequenced. The sequence is conserved across all the livestock species. Five nonsynonymous changes as compared to cattle were found in this study and were also confirmed by mRNA sequence. Two intronic single nucleotide polymorphisms (SNPs) were identified in buffalo.     

Capacitation-associated protein tyrosine phosphorylation starts early in buffalo (Bubalus bubalis) spermatozoa as compared to cattle

A comparative study was conducted on protein tyrosine phosphorylation events of capacitating sperm of two ruminant species, cattle and buffalo. Ejaculated cattle and buffalo bull spermatozoa were suspended separately in sp-TALP medium at 50 × 10⁶ mL⁻¹ and incubated at 38.5 °C with 5% CO₂ in air in the absence or presence of heparin for a period of 6 h. The extent of sperm capacitation after various periods of incubations was assessed by lysophosphatidyl choline-induced acrosome reaction followed by a triple-staining technique and capacitation-associated tyrosine-phosphorylated proteins were detected by immunoblotting technique using a monoclonal antiphosphotyrosine antibody. In the same media, over a time-period, a significant increase in capacitation percentage was observed even in control group of buffalo spermatozoa as compared to a non-significant increase in that of cattle sperm. In both cattle and buffalo spermatozoa, at 6 h, four proteins of molecular weight 49, 45, 32, and 20 kDa (designated as p49, p45, p32, and p20) were tyrosine phosphorylated. However, in buffalo, two additional proteins of 38 and 30 kDa were also tyrosine phosphorylated. In a time-course study, p20 appeared as early as at 0 h in capacitated buffalo spermatozoa as compared to 4 h in cattle. Further, in heparin-treated buffalo spermatozoa, with a time-dependent increase in tyrosine phosphorylation of some proteins, there was time-dependent dephosphorylation of some other proteins that was never seen in heparin-treated cattle sperm. Thus, the present findings revealed that though buffalo sperm takes more time than cattle for capacitation but its associated protein tyrosine phosphorylation event starts very early as compared to cattle.     

Isolation and Sequence Characterization of Mammary Derived Growth Inhibitor Gene of Riverine Buffalo (Bubalus Bubalis)

In this study, attempts have been made to identify and characterize water buffalo (Bubalus bubalis) mammary derived growth inhibitor (MDGI) gene, isolated from a mammary gland cDNA library of lactating buffalo. The complete MDGI cDNA was of 698 nucleotides, consisting 61 nucleotides in 5′ UTR, coding region of 402 nucleotides, and 235 nucleotides representing the 3′ UTR. Comparison of nucleotide and deduced amino acid sequence data with that of MDGI//fatty acid binding protein (FABP) of other species shows three buffalo specific nucleotide changes while seven nucleotide changes were common to cattle and buffalo. Buffalo and cattle MDGI had 100% amino acid sequence similarity, which also shared three amino acid changes: 34 (Ala-Gly), 109 (Leu-Met), and 132 (Glu-Gln) as compared to other species. Comparison with FABPs reported from other cattle tissues revealed highest amino acid sequence similarity with FABP-heart (100%) and least with FABP-liver (20.5%). Phylogenetic analysis revealed cattle MDGI to be closest to buffalo, while mouse MDGI was distantly placed, whereas different tissue derived FABPs of cattle showed FABP-heart closest and FABP-epidermis most distantly placed from buffalo MDGI. This report also differs from the earlier findings that MDGI is intermediate of FABP-heart and adipose.     

In vitro production of cattle × buffalo hybrid embryos using cattle oocytes and African buffalo (Syncerus caffer caffer) epididymal sperm

Interspecies hybridization of bovids occurs between domestic cattle and at least three other species; American bison (Bison bison), yak (Bos grunniens) and banteng (Bos banteng). Birth of a cattle × buffalo (Bubalus bubalis) hybrid has reportedly occurred in Russia and in China, but these reports were not authenticated. Such hybrids could be important in improving livestock production and management of diseases that impede production in tropical Africa. This study investigated hybridization between cattle and its closest African wild bovid relative, the African buffalo (Syncerus caffer caffer). In an attempt to produce cattle × buffalo hybrid embryos in vitro, matured cattle oocytes were subjected to a standard in vitro fertilization (IVF) procedure with either homologous cattle (n = 1166 oocytes) or heterologous African buffalo (n = 1202 oocytes) frozen-thawed epididymal sperm. After IVF, 67.2% of the oocytes inseminated with the homologous cattle sperm cleaved. In contrast, fertilization with buffalo sperm resulted in only a 4.6% cleavage rate. The cleavage intervals were also slower in hybrid embryos than in the IVF-derived cattle embryos. Of the cleaved homologous cattle embryos 52.2% progressed to the morula stage compared with 12.7% for the buffalo hybrid embryos. No hybrid embryos developed beyond the early morula stage, while 40.1% of the cleaved cattle × cattle embryos developed to the blastocyst stage. Transfer of buffalo hybrid IVF embryos to domestic cattle surrogates resulted in no pregnancies at 60 days post-transfer. This study indicates that interspecies fertilization of cattle oocytes with African buffalo epididymal sperm can occur in vitro, and that a barrier to hybridization occurs in the early stages of embryonic development. Chromosomal disparity is likely the cause of the fertilization abnormalities, abnormal development and subsequent arrest impairing the formation of hybrid embryos beyond the early morula stage. Transfer of the buffalo hybrid embryos did not rescue the embryos from development arrest.     

More efficient mastication allows increasing intake without compromising digestibility or necessitating a larger gut: Comparative feeding trials in banteng (Bos javanicus) and pygmy hippopotamus (Hexaprotodon liberiensis)

The digestion of plant material in mammalian herbivores basically depends on the chemical and structural composition of the diet, the mean particle size to which the forage is processed, and the ingesta retention time. These different factors can be influenced by the animal, and they can presumably compensate for each other. The pygmy hippopotamus, a non-ruminating foregut fermenter, has longer mean retention times than ruminants; however hippos do not achieve higher (fibre) digestibilities on comparable diets, which could be due to ineffective mastication. We performed feeding trials with six pygmy hippos (Hexaprotodon liberiensis) and six banteng cattle (Bos javanicus) on a grass diet. As predicted, both species achieved similar dry matter, organic matter, crude protein and gross energy digestibilities. However, neutral and acid detergent fibre digestibility was lower in pygmy hippos. Apparently, in these species, fibre digestibility was more influenced by particle size, which was larger in pygmy hippos compared to banteng, than by retention time. In spite of their higher relative food intake, the banteng in this study did not have greater relative gut fills than the hippos. Ruminants traditionally appear intake-limited when compared to equids, because feed particles above a certain size cannot leave the rumen. But when compared to nonruminating foregut fermenters, rumination seems to free foregut fermenters from an intrinsic food intake limitation. The higher energy intakes and metabolic rates in wild cattle compared to hippos could have life-history consequences, such as a higher relative reproductive rate.     

Molecular characterization of coding sequences and analysis of Toll-like receptor 3 mRNA expression in water buffalo (<Emphasis Type="Italic">Bubalus bubalis</Emphasis>) and nilgai (<Emphasis Type="Italic">Boselaphus tragocamelus</Emphasis>)

Toll-like receptor 3 (TLR3), an antiviral innate immunity receptor recognizes double-stranded RNA, preferably of viral origin and induces type I interferon production, which causes maturation of phagocytes and subsequent release of chemical mediators from phagocytes against some viral infections. The present study has characterized TLR3 complementary DNA (cDNA) in buffalo (Bubalus bubalis) and nilgai (Boselaphus tragocamelus). TLR3 coding sequences of both buffalo and nilgai were amplified from cultured dendritic cell cDNA and cloned in pGEMT-easy vector for characterization by restriction endonucleases and nucleotide sequencing. Sequence analysis reveals that 2,715-bp-long TLR3 open reading frame encoding 904 amino acids in buffalo as well as nilgai is similar to that of cattle. Buffalo TLR3 has 98.6 and 97.9% identity at nucleotide level with nilgai and cattle, respectively. Likewise, buffalo TLR3 amino acids share 96.7% identity with cattle and 97.8% with nilgai. Non-synonymous substitutions exceeding synonymous substitutions indicate evolution of this receptor through positive selection among these three ruminant species. Buffalo and nilgai appear to have diverged from a common ancestor in phylogenetic analysis. Predicted protein structures of buffalo and nilgai TLR3 from deduced amino acid sequences indicate that the buffalo and nilgai TLR3 ectodomain may be more efficient in ligand binding than that of cattle. Furthermore, TLR3 messenger RNA expression in tissues as quantified by real-time PCR was found higher in nilgai than buffalo. Electronic supplementary material Supplementary material is available in the online version of this article at and is accessible for authorized users.     

Laboratory studies on the larval food habits of the ground beetle Amara (Curtonotus) gigantea (Motschulsky) (Coleoptera: Carabidae: Zabrini)

Ground beetles (Coleoptera: Carabidae) are important components of soil ecosystems in temperate zones, but our knowledge regarding the ecology of many species is limited. This study examined larval food habits in the ground beetle Amara (Curtonotus) gigantea (Motschulsky) using laboratory‐rearing experiments. Because this beetle is a member of the tribe Zabrini, which includes several species that exhibit granivory during larval and/or adult stages, three diet types were tested, with starvation as a control: Tenebrio larvae, mixed seeds (Bidens pilosa (Asteraceae), Setaria spp., Digitaria ciliaris (both Poaceae), and Humulus scandens (Moraceae)), and Tenebrio larvae + mixed seeds. Because of high larval mortality during overwintering under laboratory‐rearing conditions, survival and the duration of development through pre‐overwintering stages (first and second instars) were compared. Larvae fed the diet of Tenebrio larvae + mixed seeds showed the highest survival (89%), followed by the diet of Tenebrio larvae (83%), but the difference between the two treatments was not significant; similarly, developmental durations did not differ between these two diets. Larvae fed the mixed‐seeds diet showed markedly lower survival, and no larvae reached the second instar. Therefore, for A. gigantea larvae, animal food results in high larval performance, whereas seeds provide a low value diet; animal food is essential for larval development, but seeds provide no benefit, even as a dietary supplement. Overall, the present results suggest that A. gigantea larvae are omnivorous but with a mainly carnivorous food habit.     

Effects of diet,habitat, and phylogeny on the fecal microbiome of wild African savanna (Loxodonta africana) and forest elephants (L. cyclotis)

The gut microbiome, or the community of microorganisms inhabiting the digestive tract, is often unique to its symbiont and, in many animal taxa, is highly influenced by host phylogeny and diet. In this study, we characterized the gut microbiome of the African savanna elephant (Loxodonta africana) and the African forest elephant (Loxodonta cyclotis), sister taxa separated by 2.6–5.6 million years of independent evolution. We examined the effect of host phylogeny on microbiome composition. Additionally, we examined the influence of habitat types (forest versus savanna) and diet types (crop‐raiding versus noncrop‐raiding) on the microbiome within L. africana. We found 58 bacterial orders, representing 16 phyla, across all African elephant samples. The most common phyla were Firmicutes, Proteobacteria, and Bacteroidetes. The microbiome of L. africana was dominated by Firmicutes, similar to other hindgut fermenters, while the microbiome of L. cyclotis was dominated by Proteobacteria, similar to more frugivorous species. Alpha diversity did not differ across species, habitat type, or diet, but beta diversity indicated that microbial communities differed significantly among species, diet types, and habitat types. Based on predicted KEGG metabolic pathways, we also found significant differences between species, but not habitat or diet, in amino acid metabolism, energy metabolism, and metabolism of terpenoids and polyketides. Understanding the digestive capabilities of these elephant species could aid in their captive management and ultimately their conservation.     

Polymorphism of <Emphasis Type="Italic">DLK1</Emphasis> and <Emphasis Type="Italic">CLPG</Emphasis> gene and their association with phenotypic traits in Chinese cattle

DLK1 and CLPG were located in DLK1-GTL2 imprinted cluster. They all affected muscle growth and meat tenderness. The functional importance of DLK1 and CLPG imply that the variation of the genes could affect the growth traits of animal. PCR-SSCP and sequencing were used to analyze the four loci of DLK1 gene and CLPG gene in 1109 individuals, which belong to eight breeds/species of bovidae, including cattle, buffalo and yak. A synonymous mutation (C451T) was detected in exon 5 of DLK1 in Qinchuan cattle, but didn’t change significantly with phenotypic traits. Three genotypes AA, AB and AC of CLPG were identified in Jiaxian cattle. The associations analyst of different genotypes showed that the individuals with genotypes AA and AC had a greater body weight and longer body length than those with genotype AB (P < 0.05 and P < 0.01, respectively); the AA individuals were different from those AB (P < 0.05) in the circumference of cannon bone. No polymorphism was observed in the other populations at other loci. These results were in agreement with the homology analysis: DLK1 and CLPG genes were in a highly conserved.     

Treatment with chemical delipidation forskolin prior to cryopreservation improves the survival rates of swamp buffalo (Bubalus bubalis) and bovine (Bos indicus) in vitro produced embryos

The cryopreservation of embryos is a technology developed for long-term genetic preservation. However, high sensitivity to low temperatures due to a large number of intracellular lipids within ruminant embryos compromises the success of this technique. The aim of this study was to examine the effects of using of lipolytic chemical agent forskolin, during in vitro producing of buffalo and bovine embryos on lipid contents, cryotolerance and subsequent developmental competence of these embryos. Buffalo and bovine oocytes were collected by the aspiration technique from follicles and submitted for in vitro fertilisation; the embryos were later divided into four experiments. Experiment 1, buffalo and bovine embryos were pre-treated in the presence and absence of 10 μM forskolin for 24 h. Lipid contents were determined by Nile red staining and confocal microscopy. We found that 10 μM forskolin was capable to reduce lipid contents within developing embryos in both of species (P < 0.01). Lipid contents within Day 2 embryos exhibited greater fluorescence intensity than did Day 7 embryos in both animal species. The purpose of Experiment 2 was to investigate the adverse effects of 10 μM forskolin on embryo development. In Experiments 3 and 4, Day 2 (4- to 8-cell stage) and Day 7 (blastocyst stage) embryos were pre-treated with 10 μM forskolin for 24 h and further cryopreserved with a controlled-rate freezing technique. The successful cryopreservation was determined by post-thawed embryonic development in vitro. The results showed that the blastocyst rate of the 4–8 cell stage in the forskolin-treated group had increased in both species, while the hatching and hatched blastocyst rates of forskolin-treated day 7 bovine embryos were significantly higher than those of the non-treated group (52.1% vs. 39.4%; P < 0.05). However, delipidation with forskolin did not affect the developmental rate of the day 7 buffalo embryos (P = 0.73). Our studies showed that delipidation by forskolin treatment increased the survival rate of cryopreservation in buffalo and bovine in vitro produced embryos.     

Resistance in cattle againstRhipicephalus appendiculatus with an assessment of cross-resistance toR. pulchellus (Acari: Ixodidae)

A comparison of the yield of engorged nymphs ofRhipicephalus appendiculatus andR. pulchellus was carried out between cattle highly resistant toR. appendiculatus but susceptible toR. pulchellus, and cattle and rabbits susceptible to both species.Resistant cattle yielded fewer and smallerR. appendiculatus nymphs than either susceptible cattle or rabbits. More nymphs of both tick species dropped from susceptible cattle but no differences were detected in the mean weight of engorgedR. pulchellus nymphs fed onR. appendiculatus-resistant and susceptible cattle, although resistant animals yielded more nymphs ofR. pulchellus than ofR. appendiculatus.An acute inflammatory reaction, accompanied by intense pruritus and grooming, was observed in the ears of the resistant cattle infested withR. appendiculatus, but no reaction was detected in the opposite ears whereR. pulchellus was feeding.The low cross-resistance between these two closely related tick species suggests that different antigens may be involved in the development of resistance in cattle to different tick species.     

Potential effects of prescribed savannah burning on the diet selection of forest buffalo (Syncerus caffer nanus) in Lopé National Park,Gabon

Seasonality and management are factors that may affect the diet selection of the forest buffalo (Syncerus caffer nanus). Fire is considered a major driving force in savannah systems and prescribed burning is a commonly applied conservation tool in protected areas such as Lopé National Park, Gabon. Prescribed annual fires contribute to the maintenance of open areas and provide high‐quality forage for forest buffalo, a major herbivore in the park. We used microhistological faecal analysis to determine the diet selection of forest buffalo and measured the extent of variation between a dry season, preburn and a wet season, postburn sampling period. The buffalo diet comprised mainly of monocotyledons, primarily grasses (Poaceae) and sedges (Cyperaceae). Intake of open‐area‐associated plant species was higher in the wet season, postburn treatment sampling period (97%) than the dry season, preburn sampling period (87%), which corresponded conversely to a reduction in forest‐associated Marantaceae plants (10% versus 1%). High proportions of grasses and sedges in the diet signify the importance of open areas for forest buffalo. Controlled burning as tool for maintenance of open areas may play a key role in the meta‐population management of the forest buffalo.     

Impacts of cattle on amphibian larvae and the aquatic environment

• 1 Agricultural practices such as cattle farming may have direct or indirect negative effects on larval amphibians by decreasing water quality through deposition of nitrogenous waste, causing eutrophication, and grazing shoreline vegetation that contributes to detrital cover and food.
• 2 We sampled amphibian larvae on the Cumberland Plateau, Tennessee, U.S.A., twice per week, water quality twice per month and algal and detrital biomass once per month at seven wetlands (three cattle‐access and four non‐access) from March to August 2005 and 2006.
• 3 In general, species richness and diversity of amphibian larvae were greater in wetlands without cattle. Mean relative abundance of green frog (Rana clamitans) and American bullfrog (Rana catesbeiana) tadpoles was greater in non‐access wetlands. Body size of some ranid larvae was larger in cattle‐access wetlands but this trend did not exist for juveniles or adults. Dissolved oxygen was lower, while specific conductivity and turbidity were higher in cattle‐access wetlands. Mean biomass of detritus was lower in cattle‐access wetlands compared to non‐access wetlands; no differences were detected in algal biomass.
• 4 Given the negative impacts of cattle on water quality, detrital biomass, larval amphibian species richness and relative abundance of some amphibian species, we recommend that farmers consider excluding these livestock from aquatic environments.

     

Do feral buffalo (Bubalus bubalis) explain the increase of woody cover in savannas of Kakadu National Park,Australia?

Aim To study changes in woody vegetation in both floodplains and eucalypt savanna over a 40‐year period using multi‐temporal spatial analysis of variation in density of a large introduced herbivore, the Asian water buffalo (Bubalus bubalis). Feral buffalo built up to high densities in the study area until c. 1985, after which a control programme almost eliminated the animals. From 1990, low densities of managed buffalo were maintained inside an enclosure. We compared trends in woody vegetation when buffalo were high‐density feral, low‐density managed or absent. Location The study area was located in and around a 116‐km² buffalo enclosure inside Kakadu National Park, in monsoonal northern Australia. Methods We analysed sequences of digitized and geo‐rectified aerial photographs, acquired in 1964, 1975, 1984, 1991 and 2004, to chart changes in woody cover on the floodplain and in the savanna. On the floodplain we assessed whether trees were present at these times at 14,568 points, and buffalo density was estimated from the density of animal tracks. In the savanna we estimated woody cover at pre‐selected sites. Generalized linear modelling was used to analyse changes in woody vegetation, using elevation and presence of woody vegetation in neighbouring points on the floodplain, and buffalo regime and initial woody cover in the savanna. Results Changes in animal track density reflected park‐wide historical estimates of buffalo numbers. Tree cover increased in both floodplain and savanna, but this was only weakly related to buffalo density. The best predictor of whether a floodplain cell converted from treeless to woody, or the converse, was the woodiness of neighbouring vegetation. There was slightly less thickening with high buffalo densities. In savanna, low densities of managed buffalo were weakly associated with increases in tree cover relative to either high densities of feral buffalo or no buffalo. Main conclusions Our study indicates that buffalo are not a major driver of floodplain and eucalypt savanna dynamics. Rather, the observed increase in woody cover in both savanna and flood plains concords with regional trends and may be related to increased atmospheric CO₂, increasing rainfall and changing fire regimes during the study period.     

Construction of a river buffalo (Bubalus bubalis) whole-genome radiation hybrid panel and preliminary RH mapping of chromosomes 3 and 10

The buffalo (Bubalus bubalis) is a source of milk and meat, and also serves as a draft animal. In this study, a 5000-rad whole-genome radiation hybrid (RH) panel for river buffalo was constructed and used to build preliminary RH maps for BBU3 and BBU10 chromosomes. The preliminary maps contain 66 markers, including coding genes, cattle expressed sequence tags (ESTs) and microsatellite loci. The RH maps presented here are the starting point for mapping additional loci that will allow detailed comparative maps between buffalo, cattle and other species whose genomes may be mapped in the future. A large quantity of DNA has been prepared from the cell lines forming the river buffalo RH panel and will be made publicly available to the international community both for the study of chromosome evolution and for the improvement of traits important to the role of buffalo in animal agriculture.