共查询到20条相似文献,搜索用时 31 毫秒
1.
Craig Baker-Austin Joanna Potrykus Margaret Wexler Philip L. Bond Mark Dopson 《Extremophiles : life under extreme conditions》2010,14(6):485-491
‘Ferroplasma acidarmanus’ Fer1 is an iron-oxidizing extreme acidophile isolated from the Iron Mountain mine, California, USA. This archaeon is predominantly
found in biofilm-associated structures in the environment, and produces two distinct biofilm morphologies. Bioinformatic analysis
of the ‘F. acidarmanus’ Fer1 genome identified genes annotated as involved in attachment and biofilm formation. No putative quorum sensing signaling
genes were identified and no N-acyl homoserine lactone-like compounds were found in ‘F. acidarmanus’ Fer1 biofilm supernatant. Scanning confocal microscopy analysis of biofilm development on the surface of pyrite demonstrated
the temporal and spatial development of biofilm growth. Furthermore, two-dimensional polyacrylamide gel electrophoresis was
used to examine differential protein expression patterns between biofilm and planktonic populations. Ten up-regulated proteins
were identified that included six enzymes associated with anaerobic growth, suggesting that the dominating phenotype in the
mature biofilm was associated with anaerobic modes of growth. This report increases our knowledge of the genetic and proteomic
basis of biofilm formation in an extreme acidophilic archaeon. 相似文献
2.
Development and characterization of a codominant marker linked to root-knot nematode resistance, and its application to peach rootstock breeding 总被引:6,自引:0,他引:6
Z.-X. Lu K. Sossey-Alaoui G. L. Reighard Wm. V. Baird A. G. Abbott 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》1999,99(1-2):115-122
The presence of a codominant AFLP marker, EAA/MCAT10, correlates with the primary source of resistance to root-knot nematodes
(Meloidogyne incognita and M. javanica) in rootstock cultivars of peach [Prunus persica (L.) Batsch]. Two allelic DNA fragments of this AFLP marker were cloned, sequenced and converted to sequence tagged sites
(STS). Four nucleotide differences (i.e. one addition and three substitutions) were observed between the two clones. Furthermore,
there was a diagnostic Sau3 AI cleavage site (GATC) in the large fragment that was absent from the small fragment (GTTC at this site). The applicability
of this STS marker system to peach germplasm improvement was evaluated: genomic DNAs of cross parents (i.e. ‘Lovell’ and ‘Nemared’),
four F1 hybrids (K62-67, K62-68, P101-40 and P101-41) and two F2 populations (from K62-68 and P101-41), as well as DNA from a test panel of 18 rootstock cultivars or selections, were PCR-amplified
with the Mij3F/Mij1R primer pair and then digested with Sau3 AI. The banding patterns showed that the EAA/MCAT10 STS markers can clearly distinguish the three genotypes – homozygous
resistant, heterozygous resistant and homozygous susceptible – in the ‘Lovell’בNemared’ cross. In addition, results from
the rootstock survey were consistent with each rootstock’s phenotypic response to nematode infection, except for ‘Okinawa’,
‘Flordaguard’ and ‘Yunnan’ where root-knot resistance may have arisen independently. Therefore, the EAA/MCAT10 STS markers
will be a useful tool to initiate marker assisted selection studies in peach rootstock breeding for root-knot nematode resistance.
Received: 4 January 1999 / Accepted: 4 January 1999 相似文献
3.
Monica M. Miazzi Hajaj R. Hajjeh Francesco Faretra 《In vitro cellular & developmental biology. Plant》2010,46(4):363-367
Powdery mildew, caused by the obligate biotrophic ascomycete Erysiphe necator, is one of the most destructive grapevine diseases worldwide. Cultivars of Vitis vinifera L, for wine and table grape production, are all susceptible to E. necator, whose attacks result in severe epidemics under the warm and dry conditions of the Mediterranean basin. The aim of the present
study was to compare the susceptibility of different grapevine cultivars to E. necator by an in vitro assay for assessing the potentiality of this method in breeding programs for resistance to the pathogen. Leaves of 12 grapevine
cultivars were spot-inoculated in vitro with about 10 conidia from five different isolates of E. necator, using colony growth and conidiation 3 wk post-inoculation as indicators of susceptibility to the disease. A remarkable difference
was observed between highly susceptible cultivars like ‘Baresana’, ‘Malvasia’, ‘Bianca’, and ‘Italia’, and the less susceptible
‘Alphonse Lavallée’ and ‘Ohanez’, in accordance with their behavior in the field. No statistically significant differences
were found in the virulence of E. necator isolates. 相似文献
4.
Localization of the rice stripe disease resistance gene, Stv-bi, by graphical genotyping and linkage analyses with molecular markers 总被引:4,自引:0,他引:4
Y. Hayano-Saito T. Tsuji K. Fujii K. Saito M. Iwasaki A. Saito 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》1998,96(8):1044-1049
We used graphical genotyping and linkage analyses with molecular markers to determine the chromosomal location of the rice
stripe disease resistance gene, Stv-b
i
. The stripe resistance gene from the indica rice (Oryza sativa) cv ‘Modan’ was introgressed into several Japanese rice varieties. We found 4 RFLP markers in ‘Modan’, five susceptible parental
rice varieties (‘Norin No. 8’, ‘Sachihikari’, ‘Kanto No. 98’, ‘Hokuriku No.103’ and ‘Koganebare’) and four resistant progeny
varieties (‘St. No. 1’, ‘Aichi No. 6’, ‘Aoisora’ and ‘Asanohikari’). Graphical genotyping of the resistant progeny revealed
a chromosomal segment ascribable to ‘Modan’ and associated with stripe resistance. The chromosomal segment from ‘Modan’ was
located at 35.85 cM on chromosome 11. Linkage analysis using 120 F2 individuals from a cross between ‘Koshihikari’ (susceptible) and ‘Asanohikari’ (resistant) revealed another 8 RFLP markers
in the same chromosome. We performed a bioassay for rice stripe resistance in F3 lines of the F2 individuals using infective small brown planthoppers and identified an 1.8-cM segment harboring the rice stripe disease resistance
gene, Stv-b
i
, between XNpb220 and XNpb257/ XNpb254. Furthermore, Stv-b
i
was linked by 0.0 cM to a RFLP marker, ST10, which was developed on the basis of the results of RAPD analysis. These DNA
markers near the Stv-b
i
locus may be useful in marker-assisted selection and map-based cloning of the Stv-b
i
gene.
Received: 26 September 1997 / Accepted: 4 November 1997 相似文献
5.
Shimpei Uraguchi Masako Kiyono Takuya Sakamoto Izumi Watanabe Katsuji Kuno 《Planta》2009,230(2):267-276
The contributions of cadmium (Cd) accumulation in cell walls, antioxidative enzymes and induction of phytochelatins (PCs)
to Cd tolerance were investigated in two distinctive genotypes of black oat (Avena strigosa Schreb.). One cultivar of black oat ‘New oat’ accumulated Cd in the leaves at the highest concentration compared to another
black oat cultivar ‘Soil saver’ and other major graminaceous crops. The shoot:root Cd ratio also demonstrated that ‘New oat’
was the high Cd-accumulating cultivar, whereas ‘Soil saver’ was the low Cd-accumulating cultivar. Varied levels of Cd exposure
demonstrated the strong Cd tolerance of ‘New oat’. By contrast, low Cd-accumulating cultivar ‘Soil saver’ suffered Cd toxicity
such as growth defects and increased lipid peroxidation, even though it accumulated less Cd in shoots than ‘New oat’. Higher
activities of ascorbate peroxidase (EC 1.11.1.11) and superoxide dismutase (EC 1. 15. 1. 1) were observed in the leaves of
‘New oat’ than in ‘Soil saver’. No advantage of ‘New oat’ in PCs induction was observed in comparison to Cd-sensitive cultivar
‘Soil saver’, although Cd exposure increased the concentration of total PCs in both cultivars. Higher and increased Cd accumulation
in cell wall fraction was observed in shoots of ‘New oat’. On the other hand, in ‘Soil saver’, apoplasmic Cd accumulation
showed saturation under higher Cd exposure. Overall, the present results suggest that cell wall Cd accumulation and antioxidative
activities function in the tolerance against Cd stress possibly in combination with vacuolar Cd compartmentation. 相似文献
6.
Elucidation of the different growth states of Ferroplasma species is crucial in understanding the cycling of iron in acid leaching sites. Therefore, a proteomic and biochemical study
of anaerobic growth in ‘Ferroplasma
acidarmanus’ Fer1 has been carried out. Anaerobic growth in Ferroplasma spp. occurred by coupling oxidation of organic carbon with the reduction of Fe3+; but sulfate, nitrate, sulfite, thiosulfate, and arsenate were not utilized as electron acceptors. Rates of Fe3+ reduction were similar to other acidophilic chemoorganotrophs. Analysis of the ‘F.
acidarmanus’ Fer1 proteome by 2-dimensional polyacrylamide gel electrophoresis revealed ten key proteins linked with central metabolic
pathways ≥4 fold up-regulated during anaerobic growth. These included proteins putatively identified as associated with the
reductive tricarboxylic acid pathway used for anaerobic energy production, and others including a putative flavoprotein involved
in electron transport. Inhibition of anaerobic growth and Fe3+ reduction by inhibitors suggests the involvement of electron transport in Fe3+ reduction. This study has increased the knowledge of anaerobic growth in this biotechnologically and environmentally important
acidophilic archaeon. 相似文献
7.
8.
Sophie Y. Dillen Véronique Storme Nicolas Marron Catherine Bastien Sabrina Neyrinck Marijke Steenackers Reinhart Ceulemans Wout Boerjan 《Tree Genetics & Genomes》2009,5(1):147-164
Interspecific hybrids of Populus species are known for their superior growth. In this study, we examined the effect of the genetic background and contrasting
environmental conditions on growth and searched for quantitative trait loci (QTL) affecting growth traits. To this end, two
hybrid poplar families resulting from controlled crosses, Populus deltoides ‘S9-2’ × P. nigra ‘Ghoy’ (D × N, 180 F1) and P. deltoides ‘S9-2’ × P. trichocarpa ‘V24’ (D × T, 182 F1), were grown at two contrasting sites, Northern Italy and Central France. At the end of the second growing season, tree dimensions
(stem height, circumference, and volume) were assessed. The performances of both families significantly differed within and
between sites. Tree volume was significantly larger at the Italian site as compared to the French site. Genotype by environment
interactions were significant but low for both families and for all growth traits. Tight correlations among the individual
growth traits indicated that there may be a common genetic mechanism with pleiotropic effects on these growth traits. In line
with previous studies, linkage groups I, VII, IX, X, XVI, XVII, and XIX appeared to have genomic regions with the largest
effects on growth traits. This study revealed that (1) both families have high potential for selection of superior poplar
hybrids due to the pronounced heterosis (hybrid vigor) and the large genetic variability in terms of growth and (2) the choice
of site is crucial for poplar cultivation.
Dillen and Storme contributed equally to the work.
An erratum to this article can be found at 相似文献
9.
J. G. Roddick G. Melchers 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》1985,70(6):655-660
Summary Analyses of leaves and ‘tubers’ from somatic hybrids of potato and tomato (‘pomato’ with plastids of potato, ‘topato’ with
plastids of tomato) produced by fusion of protoplasts from liquid cultures of dihaploid potato and mesophyll of tomato revealed
the presence of the two major potato glycoalkaloids (α-solanine and α-chaconine) as well as the tomato glycoalkaloid (αtomatine). The total alkaloid content of leaves was greater than that of ‘tubers’ and similar to levels in the foliage of
parent plants. However, glycoalkaloids were more abundant in hybrid ‘tubers’ than in normal potato tubers by a factor of 5–15.
In hybrid foliage, approximately 98% of the alkaloid present was of potato origin whereas in ‘tubers’ the reverse was the
case, with tomatine comprising 60–70% of the total alkaloid. The similarities in alkaloid content and ratios between the pomato
and the topato lines indicate that plastomes do not influence the biosynthesis and distribution of these alkaloids. The results
indicate that major secondary metabolites may prove useful for assessing the hybrid nature of such plants. 相似文献
10.
Xingguo Zhang Chaozhi Ma Tingdong Fu Yuanyuan Li Tonghua Wang Qingfang Chen Jinxing Tu Jinxiong Shen 《Molecular breeding : new strategies in plant improvement》2008,21(3):305-315
‘SI1300’ is a self-incompatible Brassica napus line generated by introgressing an S haplotype from B. rapa ‘Xishuibai’ into a rapeseed cultivar ‘Huayou No. 1’. Five S-locus specific primer pairs were employed to develop cleaved amplified polymorphic sequences (CAPS) markers linked the S haplotype of ‘SI1300’. Two segregating populations (F2 and BC1) from the cross between ‘SI1300’ and self-compatible European spring cultivar ‘Defender’, were generated to verify the molecular
markers. CAPS analysis revealed no desirable polymorphism between self-incompatible and self-compatible plants. Twenty primer
pairs were designed based on the homology-based candidate gene method, and six dominant sequence characterized amplified region
(SCAR) markers linked with the S-locus were developed. Of the six markers, three were derived from the SRK and SP11 alleles of class II B. rapa
S haplotypes and linked with S haplotype of ‘SI1300’. The other three markers were designed from the SLG-A10 and co-segregated with S haplotype of ‘Defender’. We successfully combined two pairs of them and characterized two multiplex PCR markers which could
discriminate the homozygous and heterozygous genotypes. These markers were further validated in 24 F3 and 22 BC1F2 lines of ‘SI1300 × Defender’ and another two segregating populations from the cross ‘SI1300 × Yu No. 9’. Nucleotide sequences
of fragments linked with S-locus of ‘SI1300’ showed 99% identity to B. rapa class II S-60 haplotype, and fragments from ‘Defender’ were 97% and 94% identical to SLG and SRK of B. rapa class I S-47 haplotype, respectively. ‘SI1300’ was considered to carry two class II S haplotypes and the S haplotype on the A-genome derived from B. rapa ‘Xishuibai’ determines the SI phenotype, while ‘Defender’ carry a class I S haplotype derived from B. rapa and a class II S haplotype from B. oleracea. SCAR markers developed in this study will be helpful for improving SI lines and accelerating marker-assisted selection process
in rapeseed SI hybrid breeding program. 相似文献
11.
Ying Li Yuping Song Gongjun Shi Jianjun Wang Xilin Hou 《Acta Physiologiae Plantarum》2009,31(1):155-162
Changes in ascorbic acid content and antioxidant enzyme activities were investigated in non-heading Chinese cabbage (Brassica campestris ssp. chinensis Makino) leaves of ‘Wutacai’ and ‘Erqing’ exposed to excess copper (Cu). Cu treatment reduced the fresh weight of shoot and
root by 57% and 46% in ‘Wutacai’, and 60 and 54% in ‘Erqing’, respectively. The accumulation of copper in leaves was higher
in ‘Wutacai’ than that in ‘Erqing’. Compared to the control, ascorbic acid (AsA) contents were significantly decreased after
copper treatment in both cultivars, while they were higher in ‘Wutacai’ than in ‘Erqing’, which may explain the higher copper-tolerance
of ‘Wutacai’ with higher copper accumulation. The higher AsA contents of ‘Wutacai’ resulted from their lower activities of
degrading enzymes, such as ascorbate oxydase (AAO) and ascorbate peroxidase (APX), as well as the increasing activity of dehydroascorbate
reductase (DHAR) after copper treatment compared with ‘Erqing’. Copper stimulated superoxide dismutase (SOD) activity in both
cultivars, but for catalase (CAT), there was little difference between both cultivars. Peroxidases (POD) activity was decreased
after copper treatment in ‘Erqing’, while in ‘Wutacai’, it was significantly increased at 14 days, and POD activity was higher
in ‘Wutacai’ than that in ‘Erqing’ at 21 and 28 days. Therefore, the induced increasing activity of POD in ‘Wutacai’ also
played an important role in its copper tolerance. 相似文献
12.
Di Gaspero G Cipriani G Adam-Blondon AF Testolin R 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》2007,114(7):1249-1263
Genetic maps functionally oriented towards disease resistance have been constructed in grapevine by analysing with a simultaneous
maximum-likelihood estimation of linkage 502 markers including microsatellites and resistance gene analogs (RGAs). Mapping
material consisted of two pseudo-testcrosses, ‘Chardonnay’ × ‘Bianca’ and ‘Cabernet Sauvignon’ × ‘20/3’ where the seed parents
were Vitis vinifera genotypes and the male parents were Vitis hybrids carrying resistance to mildew diseases. Individual maps included 320–364 markers each. The simultaneous use of two
mapping crosses made with two pairs of distantly related parents allowed mapping as much as 91% of the markers tested. The
integrated map included 420 Simple Sequence Repeat (SSR) markers that identified 536 SSR loci and 82 RGA markers that identified
173 RGA loci. This map consisted of 19 linkage groups (LGs) corresponding to the grape haploid chromosome number, had a total
length of 1,676 cM and a mean distance between adjacent loci of 3.6 cM. Single-locus SSR markers were randomly distributed
over the map (CD = 1.12). RGA markers were found in 18 of the 19 LGs but most of them (83%) were clustered on seven LGs, namely
groups 3, 7, 9, 12, 13, 18 and 19. Several RGA clusters mapped to chromosomal regions where phenotypic traits of resistance
to fungal diseases such as downy mildew and powdery mildew, bacterial diseases such as Pierce’s disease, and pests such as
dagger and root-knot nematode, were previously mapped in different segregating populations. The high number of RGA markers
integrated into this new map will help find markers linked to genetic determinants of different pest and disease resistances
in grape.
Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users. 相似文献
13.
When an indigenous insect becomes a pest, comparisons of performance of pest and non-pest populations on crop plants and of
genetic variation in that performance may provide insight into the evolution of pest populations. To measure such genetic
variation, 8–15 clones of the grape phylloxera (Daktulosphaira vitifoliae Fitch) were collected from wild grapevines in each of 3 geographically isolated sites (populations) and from commercial vineyards
in northern California. A complete life table was made for clonal replicates from populations collected from wild grapevines
on each of two commercial grape cultivars, the susceptibleVitis vinifera (L.) cultivar Cabernet Sauvignon, and the phylloxera-resistant rootstock ‘AxR # 1’. Variation in mean performance on these
two hosts was partitioned among clones within collection sites and among sites. Performance measures included an individual
analog to the intrinsic rate of increase (r), age at first oviposition, fecundity in the first ten days of reproduction, total fecundity, and longevity. The overall
performance of phylloxera from the wild grapevines on the resistant cultivar AxR # 1 was greater than or equal to that on
the susceptible cultivar Cabernet Sauvignon. There was significant variation among clones within populations from wild grapes
in the rate of increase on ‘AxR # 1’ and marginally significant clonal variation in some of the component paramters. There
was no significant variation among clones within populations on ‘Cabernet Sauvignon’ and no significant differences between
populations on either crop in any trait.
In a second experiment we compared the relative performance of 15–17 clones from wild grapevines and from commercial vineyards
when reared on ‘Cabernet Sauvignon’ and ‘AxR # 1’. Phylloxera from commercial vineyards had much higher overall performance
on ‘Cabernet Sauvignon’ than did phylloxera from the wild grapevines. Phylloxera from the commercial vineyard also had higher
performance on ‘Cabernet Sauvignon’ than on ‘AxR′ 1’ but the performance of the phylloxera from wild and commercial grapes
did not differ on ‘AxR # 1’.
Our results show that there is genetic variation in traits related to performance on a resistant rootstock within these indigenous
non-pest populations of phylloxera, but not among them. The pattern of performance of pest and non-pest populations on two
commercial cultivars suggests that current levels of phylloxera performance on crop cultivars are the result of adaptation
to those cultivars which has occurred while phylloxera has been associated with viticulture. Implications of these results
for understanding the recent adaptation of phylloxera to ‘AxR # 1’ in California are also discussed. 相似文献
14.
Many estimates of ‘marine protected area (MPA) effects’ may be confounded by environmental heterogeneity between MPA and ‘Control’
sites. However, the magnitude and extent of such confounding is generally unknown. Here, the effects of microhabitat availability
on estimates of MPA performance were explicitly explored. Abundance of a reef fish species, Ctenochaetus striatus (Quoy & Gaimard, 1825), available microhabitat, and, microhabitat preference for C. striatus within six ‘Ra’ui’ (traditionally managed MPAs) and six paired ‘Control’ sites on the island of Rarotonga, Cook Islands,
were estimated. Response ratios accounting for available microhabitat qualitatively modified inferences of Ra’ui effectiveness
for two of the six Ra’ui when contrasted with response ratios not accounting for available microhabitat. However, analysis
of covariance (ANCOVA) indicated that available microhabitat accounted for significant variation in C. striatus densities between Ra’ui and Control, rather than protection. Our results suggest that adjusting for microhabitat availability
may significantly alter our perception of the effects of Ra’ui on C. striatus. Our framework, in concert with our ANCOVA models, provides a stronger assessment of MPA effects. Further, we conclude that
metrics of environmental heterogeneity should be incorporated into future assessments of MPA effectiveness, with our work
describing one potential framework to accomplish this. 相似文献
15.
Sibylle Stoeckli Karsten Mody Andrea Patocchi Markus Kellerhals Silvia Dorn 《Tree Genetics & Genomes》2009,5(1):257-267
The aim of this study was to assess the genetic basis of rust mite (Aculus schlechtendali) resistance in apple (Malus × domestica). A. schlechtendali infestation of apple trees has increased as a consequence of reduced side effects of modern fungicides on rust mites. An
analysis of quantitative trait loci (QTLs) was carried out using linkage map data available for F1 progeny plants of the cultivars ‘Fiesta’ × ‘Discovery’. Apple trees representing 160 different genotypes were surveyed for
rust mite infestation, each at three different sites in two consecutive years. The distribution of rust mites on the individual
apple genotypes was aggregated and significantly affected by apple genotype and site. We identified two QTLs for A. schlechtendali resistance on linkage group 7 of ‘Fiesta’. The AFLP marker E35M42-0146 (20.2 cM) and the RAPD marker AE10-400 (45.8 cM) were
closest positioned to the QTLs and explained between 11.0% and 16.6% of the phenotypic variability. Additionally, putative
QTLs on the ‘Discovery’ chromosomes 4, 5 and 8 were detected. The SSR marker Hi03a10 identified to be associated to one of
the QTLs (AFLP marker E35M42-0146) was traced back in the ‘Fiesta’ pedigree to the apple cultivar ‘Wagener’. This marker may
facilitate the breeding of resistant apple cultivars by marker assisted selection. Furthermore, the genetic background of
rust mite resistance in existing cultivars can be evaluated by testing them for the identified SSR marker.
Electronic supplementary material The online version of this article (doi:) contains supplementary material, which is available to authorized users. 相似文献
16.
17.
M. T. McHenry B. R. Wilson J. M. Lemon D. E. Donnelly I. G. Growns 《Plant and Soil》2006,285(1-2):245-255
Dense White Cypress Pine (Callitris glaucophylla J. Thompson and L.A.S. Johnson) regrowth occurs frequently across previously cleared landscapes in New South Wales (NSW), and is thought to adversely affect agricultural production and to cause land degradation. The NSW Native Vegetation Act (2003) requires that management of native vegetation including pre-1990 regrowth must ‘improve or maintain’ site condition, yet there is currently limited information regarding techniques for the optimum management of C. glaucophylla in this regard. We conducted a preliminary study to examine floristic composition, soil condition (to 50 cm) and carbon storage under ‘Dense’ (dense regrowth), ‘Thinned’ (dense regrowth thinned 2000/2001) and ‘Un-colonised’ (pasture not yet recolonised by C.␣glaucophylla) plots on private lands in NSW. Reduced tree density from thinning resulted in increased biomass of the remaining individual trees. Un-colonised plots had significantly more groundcover than thinned plots, which had significantly more groundcover than dense plots. Differences in plant diversity however, were explained by site factors rather than land use. Soils in the dense plots were the most acid but soil pH was significantly higher in thinned plots and pH was highest in soil of the un-colonised plots. Mean values for carbon, nitrogen, sulphur and extractable phosphorus varied among sites, although each were significantly more abundant in the mineral soil of dense and thinned plots compared with un-colonised plots, suggesting that thinning had had a minimal effect on the soil parameters assessed. Accounting for all site components, site carbon storage was significantly higher in dense and thinned plots compared with un-colonised plots due to elevated levels of soil and litter carbon as well as the presence of trees. The results indicate that thinning dense C. glaucophylla can maintain and (by some measures) improve site condition. However, given the variability in some of the parameters assessed, further study across a wider range of soil types and rainfall gradients is proposed. 相似文献
18.
Accumulation of additive effects generates a strong photoperiod sensitivity in the extremely late-heading rice cultivar ‘Nona Bokra’ 总被引:1,自引:0,他引:1
Uga Y Nonoue Y Liang ZW Lin HX Yamamoto S Yamanouchi U Yano M 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》2007,114(8):1457-1466
Many rice cultivars that originated from lower-latitude regions exhibit a strong photoperiod sensitivity (PS) and show extremely
late heading under long-day conditions. Under natural day-length conditions during the cropping season in Japan, the indica rice cultivar ‘Nona Bokra’ from India showed extremely late heading (202 days to heading) compared to the japonica cultivar ‘Koshihikari’ (105 days), from Japan. To elucidate the genetic factors associated with such extremely late heading,
we performed quantitative trait locus (QTL) analyses of heading date using an F2 population and seven advanced backcross progeny (one BC1F2 and six BC2F2) derived from a cross between ‘Nona Bokra’ and ‘Koshihikari’. The analyses revealed 12 QTLs on seven chromosomes. The ‘Nona
Bokra’ alleles of all QTLs contributed to an increase in heading date. Digenic interactions were rarely observed between QTLs.
Based on the genetic parameters of the QTLs, such as additive effects and percentage of phenotypic variance explained, these
12 QTLs are likely generate a large proportion of the phenotypic variation observed in the heading dates between ‘Nona Bokra’
and ‘Koshihikari’. Comparison of chromosomal locations between heading date QTLs detected in this study and QTLs previously
identified in ‘Nipponbare’ × ‘Kasalath’ populations revealed that eight of the heading date QTLs were recognized nearby the
Hd1, Hd2, Hd3a, Hd4, Hd5, Hd6, Hd9, and Hd13. These results suggest that the strong PS in ‘Nona Bokra’ was generated mainly by the accumulation of additive effects of
particular alleles at previously identified QTLs. 相似文献
19.
A. Gallois J. C. Audran M. Burrus 《TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik》1998,97(1-2):211-219
We assessed the genetic relationships between members of the Fagaceae family by RAPDs in order to better ascertain the taxonomic status of a very particular population of Fagus sylvatica, the ‘tortuosa’ variety. Intra- and inter-population Nei and Li’s mean genetic distances were compared, and the genetic relationships
between individuals were clarified on dendrograms by the Neighbor joining method. RAPD analysis was first conducted on three
species from three genera, Quercus petraea, Castanea sativa, and Fagus sylvatica, in order to develop an efficient RAPD protocol. The variety level was then studied, and a general tendency of the individuals
to cluster by variety was observed. Individuals also clustered by geographic locations, but the genetic distances between
populations were not correlated to the distances between sites. Finally, we compared the common beech and ‘tortuosa’ varieties
from two different locations, Verzy and Süntel. Both populations from one location were closer than the same variety from
two sites. This last result is in agreement with those previously obtained with isozymes. Hypotheses concerning the origin
of the ‘tortuosa’ variety are discussed.
Received: 9 January 1998 / Accepted: 25 February 1998 相似文献