Time- and space-resolved Monte Carlo study of water radiolysis for photon,electron and ion irradiation

Time-dependent yields of the most important products of water radiolysis , ^•OH, H^•, H₃O⁺, H₂, OH⁻ and H₂O₂ have been calculated for ⁶⁰Co-photons, electrons, protons, helium- and carbon-ions incident onto water. G values have been evaluated for the interval from 1 ps to 1 μs after initial energy deposition as a function of time, as well as after 1 ns and at the end of the chemical stage as a function of linear energy transfer (LET), covering an interval from approximately 0.2 up to 750 keV/μm by means of different particle types. In this work, the modules of the biophysical Monte Carlo track structure code PARTRAC dealing with the simulation of prechemical and chemical stages have been improved to extend interaction data sets for heavier ions. Among other newly selected parameter values, the thermalisation distance between the point of generation and hydration of subexcitation electrons has been adopted from recent data in the literature. As far as data from the literature are available, good agreement has been found with the calculated time- and LET-dependent yields in this work, supporting the selection of the revised parameter values.     

Characteristics of Myeloid Differentiation and Maturation Pathway Derived from Human Hematopoietic Stem Cells Exposed to Different Linear Energy Transfer Radiation Types

Exposure of hematopoietic stem/progenitor cells (HSPCs) to ionizing radiation causes a marked suppression of mature functional blood cell production in a linear energy transfer (LET)- and/or dose-dependent manner. However, little information about LET effects on the proliferation and differentiation of HSPCs has been reported. With the aim of characterizing the effects of different types of LET radiations on human myeloid hematopoiesis, in vitro hematopoiesis in Human CD34⁺ cells exposed to carbon-ion beams or X-rays was compared. Highly purified CD34⁺ cells exposed to each form of radiation were plated onto semi-solid culture for a myeloid progenitor assay. The surviving fractions of total myeloid progenitors, colony-forming cells (CFC), exposed to carbon-ion beams were significantly lower than of those exposed to X-rays, indicating that CFCs are more sensitive to carbon-ion beams (D ₀ = 0.65) than to X-rays (D ₀ = 1.07). Similar sensitivities were observed in granulocyte-macrophage and erythroid progenitors, respectively. However, the sensitivities of mixed-type progenitors to both radiation types were similar.In liquid culture for 14 days, no significant difference in total numbers of mononuclear cells was observed between non-irradiated control culture and cells exposed to 0.5 Gy X-rays, whereas 0.5 Gy carbon-ion beams suppressed cell proliferation to 4.9% of the control, a level similar to that for cells exposed to 1.5 Gy X-rays. Cell surface antigens associated with terminal maturation, such as CD13, CD14, and CD15, on harvest from the culture of X-ray-exposed cells were almost the same as those from the non-irradiated control culture. X-rays increased the CD235a⁺ erythroid-related fraction, whereas carbon-ion beams increased the CD34⁺CD38⁻ primitive cell fraction and the CD13⁺CD14^+/−CD15⁻ fraction. These results suggest that carbon-ion beams inflict severe damage on the clonal growth of myeloid HSPCs, although the intensity of cell surface antigen expression by mature myeloid cells derived from HSPCs exposed to each type of radiation was similar to that by controls.     

A Monte-Carlo step-by-step simulation code of the non-homogeneous chemistry of the radiolysis of water and aqueous solutions—Part II: calculation of radiolytic yields under different conditions of LET,pH, and temperature

The importance of the radiolysis of water in the initial events following irradiation of biological systems has motivated considerable theoretical and experimental work in the field of radiation chemistry of water and aqueous systems. These studies include Monte-Carlo simulations of the radiation track structure and of the non-homogeneous chemical stage, which have been successfully used to calculate the yields of radiolytic species (H^·, ^·OH, H₂, H₂O₂, e_aq⁻, …). Most techniques used for the simulation of the non-homogeneous chemical stage such as the independent reaction time (IRT) technique and diffusion kinetics methods do not calculate the time evolution of the positions of the radiolytic species. This is a major limitation to their extension to the simulation of the irradiation of radiobiological systems. Step-by-step (SBS) simulation programs provide such information, but they are very demanding in term of computer power and storage capacity. Recent improvements in computer performance now allow the regular use of the SBS method in radiation chemistry simulations. In the first of a series of two papers, the SBS method has been reviewed in details and the implementation of a SBS code has been discussed. In this second paper, the results of several studies are presented: (1) the time evolution of the radiolytic yields from the formation of the radiation track to 10⁻⁶ s; (2) the effect of pH on yields (pH ~ 0.4–7.0); (3) the effect of proton energy (and LET) on yields (300 MeV-0.1 MeV), and iv) the effect of the ion type (¹H⁺, ⁴He²⁺, ¹²C⁶⁺) on yields. Nonbiological applications, i.e., the study of the temperature on the yields (about 25–300°C) and the simulation of the time evolution of G(Fe³⁺) in the Fricke dosimeter are also discussed.     

Mechanism of action of gastric secretory inhibitors: effects of SCN- OCN-, NO-2, and NH+4 on (H+ + K+)-ATPase-mediated transport of H+ inside gastric microsomal vesicles

The mechanisms of action of the known inhibitors of gastric acid secretion such as SCN^?, OCN^?, NO₂^?, and NH₄⁺ (M. E. LeFevre, E. J. Gohmann, Jr. and W. S. Rehm, 1964, Amer. J. Physiol.207, 613–618) were investigated using isolated pig gastric microsomal vesicles as a model system. The gastric microsomal vesicles enriched in (H⁺ + K⁺)-ATPase have previously been demonstrated to accumulate H⁺ in exchange for K⁺. The vesicular accumulation of acridine orange, which is a measure of H⁺ uptake, shows sigmoidal kinetics in the presence of increasing K⁺ with a Hill coefficient of 2.27 and a S₅₀ of 19.05 mm. None of those agents affects the microsomal (H⁺ + K⁺)-ATPase activity, although they inhibit vesicular H⁺ transport in a dose-dependent manner; the order of efficacy being NH₄⁺ > SCN^? > OCN^? > NO₂^?. The inhibitory effects of NH₄⁺ on vesicular H⁺ transport appear to be due to neutralization of the transported H⁺ by freely permeable NH₃ generated from the dissociation of NH₄⁺ in the bulk medium. SCN^?, OCN^?, and NO₂^? appear to work by a different mechanism. These agents do not act as protonophores. Our data demonstrate that the presence of SCN^?, OCN^?, and NO₂^? within the vesicle interior are essential for exerting their inhibitory effects. Furthermore, the inhibitory effects of SCN^? and OCN^? on vesicular H⁺ transport could be reversed by an elevation of intravesicular K⁺. Our data strongly suggest that the effects of SCN^?, OCN^?, and NO₂^? are exerted by interfering with a low-affinity K⁺ site (S₅₀ = 19.05 mm) within the domain of the gastric ATPase complex. This low-affinity K⁺ site is accessible only from the vesicle interior and appears to be essential for the vectorial transport of H⁺ by the gastric microsomal (H⁺ + K⁺)-ATPase system.     

EFFECTS OF KAINIC ACID ON ION DISTRIBUTION AND ATP LEVELS OF STRIATAL SLICES INCUBATED IN VITRO

Abstract— To determine the mechanism of neurotoxicity of kainic acid, striatal slices (350μ) were incubated in oxygenated Krebs buffer with kainic acid and other depolarizing agents; and the alterations in the uptake and retention of ²²Na⁺, ⁸⁶Rb⁺ (as a measure of K ⁺), ³H_zO and the levels of ATP were determined. The excitatory amino acid, L-glutamate (10 mM) increases striatal slice uptake and retention of Na⁺, K⁺ and H₂O but decreases ATP levels whereas the neuroexcitant, A'-methyl aspartate, increases only Na⁺ and H₂O. Veratridine (100μM), which opens electrogenic sodium channels, and ouabain (100μM), which inhibits Na⁺-K⁺ ATPase, both elevate striatal Na⁺ and H₂O but considerably reduce K⁺ and ATP. The effects of these different depolarizing agents on the parameters examined are consistent with their mechanisms of actions and support the validity of this in vitro method. Although 10mM-kainate significantly depresses striatal K⁺ and ATP, lower concentrations of kainate (5mM-0.1μ) elevate striatal uptake of Na⁺ but do not markedly affect H₂O, K⁺ or ATP. Kainate (10mM-lμM) does not exhibit additivity with 10 mM-glutamate with respect to Na⁺ permeability but does significantly potentiate glutamate's ATP depleting effects. Injection of 10 nmol of kainate into the striatum in vivo causes a reduction in striatal ATP 1 h afterward which is comparable to that occurring in vitro with 10mM-kainate alone or with lower concentrations of kainate (≥1/μM) with 10 mM-glutamate. These results suggest that kainate alone is directly neurotoxic at 10mM or neurotoxic at lower concentrations in combination with the high intrasynaptic levels of glutamate on neurons receiving glutamatergic innervation.     

Geant4-DNA simulation of the pre-chemical stage of water radiolysis and its impact on initial radiochemical yields

This paper demonstrates the impact of the pre-chemical stage, especially the dissociation scheme and the associated probabilities, on water radiolysis simulation using the Geant4-DNA Monte Carlo track structure simulation toolkit. The models and parameters provided by TRACs have been collected and implemented into Geant4-DNA. In order to evaluate their influence on water radiolysis simulation, the radiochemical yields (G-values) are evaluated as a function of time and LET using the “chem6” Geant4-DNA example, and they are compared with published experimental and calculated data. The new pre-chemical models lead to a better agreement with literature data than the default pre-chemical models of Geant4-DNA, especially for OH radicals and H₂O₂. The revised chemistry constructor “G4EmDNAChemistry_option3” is available in Geant4-DNA version 10.7.     

Product yields from irradiated glycylglycine in oxygen-free solutions: Monte Carlo simulations and comparison with experiments

The radiation chemistry of photon-irradiated aqueous solutions of biological molecules may be considered under four distinct time regimes: physical transport (≤10^–15 s); prechemical conversion of H₂O⁺, H₂O^*, and subexcitation electrons into free radicals and molecular products (10^–15 s to 10^–12 s); chemical reactions within individual electron tracks (10^–12 s to 10^–6 s); and chemical reactions within overlapping tracks (>10^–6 s). We have previously reported of the use of the Monte Carlo radiation transport/chemistry codes OREC and RADLYS to model the radiolysis of glycylglycine in oxygen-free solution to a time of 1 μs. These simulations successfully predicted the yields of free ammonia, an end product created solely in the reaction of the hydrated electron with the solute within individual tracks. Other measurable products are only partially created during intratrack reactions, and thus one must additionally consider the late, intertrack chemistry of this system. In this paper, we extend our simulations of glycylglycine radiolysis to model for the first time the events which occur during this late chemistry stage. The model considers the product rates of the reactants in bulk solution by using previously available microsecond intratrack yields given by single-track OREC/RADLYS simulations and an x-ray dose rate of 2.80 Gy min^–1 as used in a companion experimental program. These rates are then applied in a series of coupled, differential rate equations that describe the solution chemistry of glycylglycine radiolysis. Product yields are reported as a function of time over a total irradiation period of 10⁴ s. Excellent overall agreement is seen between the theoretical predictions and measurements of five radiolysis end products: free ammonia, acetylglycine, diaminosuccinic acid, aspartic acid, and succinic acid. The model also gives the explicit contributions of intratrack and intertrack reactions to the various end products. For example, the model predicts that ∼56% and 93% of succinic acid and aspartic acid, respectively, are produced during intertrack reactions at a solute concentration of 0.05 M; these contributions drop to 0.07% and 11%, respectively, at 1.2 M. Received: 22 May 1998 / Accepted in revised form: 27 August 1998     

The effects of various external cations and sodium transport inhibitors on sodium uptake by the sailfin molly,Poecilia latipinna, acclimated to sea water

Summary The effects of various external cations and sodium transport inhibitors on sodium uptake by the sailfin molly,Poecilia latipinna, acclimated to sea water was investigated. While the injection of acetazolamide had no effect on sodium uptake, addition of NH₄ ⁺, H⁺, K⁺ or amiloride to the external solution significantly inhibited the uptake of sodium by the fish. These data support the proposition that sea water acclimatedP. latipinna possess the Na⁺/H⁺ and/or Na⁺/NH₄ ⁺ exchange mechanisms which are normally thought to be present only in fresh water acclimated fish.     

Induction and prevention of carcinogenesis in rat skin exposed to space radiation

Quantitative cancer incidence data exist for various laboratory animal models, but little of this information is usable for estimating human risks, primarily because of uncertainties about possible mechanistic differences among species. Acceptance and utilization of animal data for human risk assessment will require a much better understanding of the comparative underlying mechanisms than now exists. A dual-lesion, radiation-track model in rat skin has proven to be consistent with tumor induction data with respect to acute radiation doses ranging from 0.5 up to 10 Gy and higher, and average LETs ranging from 0.34 to 150 keV μm⁻¹ according to the form neoplastic risk (D,L) = CLD + BD². A recent result with the ⁵⁶Fe ion beam showed dose-response consistency for malignant (carcinomas) and benign (fibromas) tumor induction with earlier results utilizing argon and neon ion beams. A discrepancy between the model and experiment was found indicating that proportionality of cancer yield with LET did not occur at 150 versus 125 keV μm⁻¹, i.e. tumor yield did not increase in spite of a 20% increase of LET, which suggests that a LET response maximum exists at or within this dose range. Concordance between the model and tumor induction data in rat skin implies that potential intervening complexities of carcinogenic progression fail to obscure the basic radiobiological assumptions underpinning the model. Gene expression microarray analysis shows that vitamin A inhibits the expression of about 80% of the inflammation-related genes induced by the radiation and prevents about 46% of the neoplasms associated with ⁵⁶Fe ion radiation without appearing to interfere with the underlying dose and LET response patterns. Further validation is needed, but the model has the potential to provide quantitative estimates of cancer risk as a function of dose and LET for almost any type of radiation exposure and even for combinations of different radiations provided only three empirical parameters can be established for each type of radiation and organ system.     

Surface potential of phosphatidylserine monolayers II. Divalent and monovalent ion binding

Ion binding constants for phosphatidylserine membranes have been derived from the variation of the surface potential of phosphatidylserine monolayers with divalent cation concentrations in the presence of various monovalent salts in the aqueous subphase. The observed surface potential data for the monolayers, analyzed by use of the Gouy-Chapman diffuse potential theory, together with a simple binding reaction formula, yield, for Ca²⁺, Mg²⁺, Na⁺ and (Me)₄N⁺ binding constant values of 30 M^?1, 10 M^?1, 0.6 M^?1 and 0.05 M^?1, respectively. The effect of pH on surface potential of phosphatidylserine monolayers was found to be dependent upon ionic species other than H⁺ in the subphase solution. The distinction between apparent and intrinsic dissociation constants of H⁺ for biomolecules was made in terms of ion binding due to other ions at the same site as for H⁺ in biomolecules.     

Rapid calcium exchange for protons and potassium in cell walls of Chara

Net fluxes of Ca²⁺, H⁺ and K⁺ were measured from intact Chara australis cells and from isolated cell walls, using ion-selective microelectrodes. In both systems, a stimulation in Ca²⁺ efflux (up to 100 nmol m^?2 s^?1, from an influx of ～40 nmol m^?2 s^?1) was detected as the H⁺ or K⁺ concentration was progressively increased in the bathing solution (pH 7.0 to 4.6 or K⁺ 0.2 to 10mol m^?3, respectively). A Ca²⁺ influx of similar size occurred following the reverse changes. These fluxes decayed exponentially with a time constant of about 10 min. The threshold pH for Ca²⁺ efflux (pH 5.2) is similar to a reported pH threshold for acid-induced wall extensibility in a closely related characean species. Application of NH₄⁺ to intact cells caused prolonged H⁺ efflux and also transient Ca²⁺ efflux. We attribute all these net Ca²⁺ fluxes to exchange in the wall with H⁺ or K⁺. A theoretical treatment of the cell wall ion exchanges, using the ‘weak acid Donnan Manning’ (WADM) model, is given and it agrees well with the data. The role of Ca²⁺ in the cell wall and the effect of Ca²⁺ exchanges on the measured fluxes of other ions, including bathing medium acidification by H⁺ efflux, are discussed.     

The dynamics of H+ efflux from the trap lobes of Dionaea muscipula Ellis (Venus's flytrap)

Abstract. H⁺ efflux from the trap lobes of Dionaea muscipula Ellis (Venus's flytrap) was measured in vitro. FC, IAA, and 2,4-D markedly increase the rate of H⁺ efflux within minutes of their addition to the incubation medium whereas ABA and DES cause the rate to decrease. Consequently, the H⁺ efflux mechanism of Dionaea is considered to be similar to the H⁺ extrusion pumps of other higher plants in this respect. However, the H⁺ extrusion mechanism of Dionaea may be unusual in that long-term exposure of the trap lobes to known secretion elicitors— bactopeptone, NH₄⁺, Na ⁺, urea, thiourea, glycine or xanthine—also causes a large increase in the steady-state rate of H⁺ efflux from the trap lobes. Since the observed H⁺ effluxes primarily correspond to the adaxial surface of the trap lobes and show similar time- and secretion elicitor-dependencies to the responses seen in situ, it appears that the H⁺ effluxes measured in vitro bear a direct relationship to those observed in the intact, actively secreting plant. Three of the secretion elicitors that were tested— K⁺, NH₄⁺, and urea—have rapid effects on the rate of H⁺ extrusion in addition to their long-term effects. K⁺ and NH₄⁺ cause a rapid acceleration of H⁺ efflux whereas urea causes a rapid deceleration or, at high external concentrations, reversal of the net flux. The effect of K⁺ is inferred to result from K⁺ -H⁺ exchange between the tissue and bathing medium. Studies with structural analogues of NH₄⁺ and urea and inhibitors of the assimilation of reduced nitrogen suggest that the effects of NH₄⁺ and urea result from the pH-perturbing consequences of their metabolism subsequent to their absorption. These effects are considered to be auxiliary to the elicitation of secretion. It is proposed that H⁺ efflux from the trap lobes is mediated by a K⁺-H⁺ exchange mechanism, the activity of which is modified by long-term exposure to secretion elicitors and/or short-term exposure to factors which alter the availability of endogenous H⁺ ions.     

Time and charge/pH-dependent activation of K+ channel-mediated K+ influx and K+/H+ exchange in guinea pig heart isolated mitochondria; role in bioenergetic stability

Mitochondria play an important role not only in producing energy for the cell but also for regulating mitochondrial and cell function depending on the cell's needs and environment. Uptake of cations, anions, and substrates requires a stable, polarized transmembrane charge potential (ΔΨ_m). Chemiosmosis requires ion exchangers to remove Na⁺, K⁺, Ca²⁺, PO₄^3?, and other charged species that enter mitochondria. Knowledge of the kinetics of mitochondrial (m) cation channels and exchangers is important in understanding their roles in regulating mitochondrial chemiosmosis and bioenergetics. The influx/efflux of K⁺, the most abundant mitochondrial cation, alters mitochondrial volume and shape by bringing in anions and H₂O by osmosis. The effects of K⁺ uptake through ligand-specific mK⁺ channels stimulated/inhibited by agonists/antagonists on mitochondrial volume (swelling/contraction) are well known. However, a more important role for K⁺ influx is likely its effects on H⁺ cycling and bioenergetics facilitated by mitochondrial (m) K⁺/H⁺ exchange (mKHE), though the kinetics and consequences of K⁺ efflux by KHE are not well described. We hypothesized that a major role of K⁺ influx/efflux is stimulation of respiration via the influx of H⁺ by KHE. We proposed to modulate KHE activity by energizing guinea pig heart isolated mitochondria and by altering the mK⁺ cycle to capture changes in mitochondrial volume, pH_m, ΔΨ_m, and respiration that would reflect a role for H⁺ influx via KHE to regulate bioenergetics. To test this, mitochondria were suspended in a 150 mM K⁺ buffer at pH 6.9, or in a 140 mM Cs⁺ buffer at pH 7.6 or 6.9 with added 10 mM K⁺, minimal Ca²⁺ and free of Na⁺. O₂ content was measured by a Clark electrode, and pH_m, ΔΨ_m, and volume, were measured by fluorescence spectrophotometry and light-scattering. Adding pyruvic acid (PA) alone caused increases in volume and respiration and a rapid decrease in the transmembrane pH gradient (ΔpH_m = pH_in–pH_ext) at pH_ext 6.9> > 7.6, so that ΔΨ_m was charged and maintained. BK_Ca agonist NS1619 and antagonist paxilline modified these effects, and KHE inhibitor quinine and K⁺ ionophore valinomycin depolarized ΔΨ_m. We postulate that K⁺ efflux-induced H⁺ influx via KHE causes an inward H⁺ leak that stimulates respiration, but at buffer pH 6.9 also utilizes the energy of ΔpH_m, the smaller component of the overall proton motive force, ΔμH⁺. Thus ΔpH_m establishes and maintains the ΔΨ_m required for utilization of substrates, entry of all cations, and for oxidative phosphorylation. Thus, K⁺ influx/efflux appears to play a pivotal role in regulating energetics while maintaining mitochondrial ionic balance and volume homeostasis.     

Ionic and osmotic components of salt stress specifically modulate net ion fluxes from bean leaf mesophyll

Ionic mechanisms of salt stress perception were investigated by non‐invasive measurements of net H⁺, K⁺, Ca²⁺, Na⁺, and Cl^? fluxes from leaf mesophyll of broad bean (Vicia faba L.) plants using vibrating ion‐selective microelectrodes (the MIFE technique). Treatment with 90 m M NaCl led to a significant increase in the net K⁺ efflux and enhanced activity of the plasma membrane H⁺‐pump. Both these events were effectively prevented by high (10 m M ) Ca²⁺ concentrations in the bath. At the same time, no significant difference in the net Na⁺ flux has been found between low‐ and high‐calcium treatments. It is likely that plasma membrane K⁺ and H⁺ transporters, but not the VIC channels, play the key role in the amelioration of negative salt effects by Ca²⁺ in the bean mesophyll. Experiments with isotonic mannitol application showed that cell ionic responses to hyperosmotic treatment are highly stress‐specific. The most striking difference in response was shown by K⁺ fluxes, which varied from an increased net K⁺ efflux (NaCl treatment) to a net K⁺ influx (mannitol treatment). It is concluded that different ionic mechanisms are involved in the perception of the ‘ionic’ and ‘osmotic’ components of salt stress.     

Effects of ionic environment on viscosity of Triton-extracted catch connective tissue of a sea cucumber body wall

Mechanical properties of catch connective tissue are greatly affected by its ionic environment. In order to understand the role of ions, a preparation was developed in which cellular activities were suppressed by treatment with 1% Triton X-100.The material used was body-wall dermis of the sea cucumber Holothuria leucospilota Brandt.The effects of the main cations in seawater (H⁺, Na⁺, K⁺, Ca²⁺, Mg²⁺) on the creep viscosity of the Triton model were compared with those of intact dermis.The comparison distinguished the site of action of ions. K⁺ had its main effect on cells that control the catch mechanism, whereas Ca²⁺ worked directly on extracellular materials. H⁺, Na⁺ and Mg²⁺ had both effects.     

Theoretical studies of infrared signatures of proton-bound amino acid dimers with homochiral and heterochiral moieties

Proton-bound homochiral and heterochiral dimers, X-H⁺-X, of five amino acids (X = Ser, Ala, Thr, Phe, and Arg) are investigated theoretically using quantum chemical density functional theory (DFT) calculations and molecular dynamics simulations with the aim to unveil diastereomer-specific mid-infrared (mid-IR) absorption bands in the spectral range of 1000 to 1800 cm⁻¹. The theoretical calculations performed in this work imply that all systems, except Ala₂H⁺, have distinct mid-IR absorption bands in homochiral and heterochiral configurations, which make them appropriate systems to be studied experimentally with mid-IR spectroscopy. We show that intermolecular interaction with the side chain, in the form of hydrogen bonding or cation-π interaction, is necessary for chiral effects to be present in the mid-IR spectra of proton-bound dimers of amino acids. We also report new conformers for Ala₂H⁺, Thr₂H⁺, Phe₂H⁺, and Arg₂H⁺, which were not found in earlier studies of these dimers.     

Mathematical model of action potential in higher plants with account for the involvement of vacuole in the electrical signal generation

Electrical signals, including action potential (AP), play an important role in plant adaptation to the changing environmental conditions. Experimental and theoretical investigations of the mechanisms of AP generation are required to understand the relationships between environmental factors and electrical activity of plants. In this work we have elaborated a mathematical model of AP generation, which takes into account the participation of vacuole in the generation of electrical response. The model describes the transporters of the plasma membrane (Ca²⁺, Cl^–, and K⁺ channels, H⁺- and Ca²⁺-ATPases, H⁺/K⁺ antiporter, and 2H⁺/Cl^– symporter) and the tonoplast (Ca²⁺, Cl^–, and K⁺ channels; H⁺- and Ca²⁺-ATPases; H⁺/K⁺, 2H⁺/Cl^–, and 3H⁺/Ca²⁺ antiporters), with due consideration of their regulation by second messengers (Ca²⁺ and IP3). The apoplastic, cytoplasmic and vacuolar buffers are also described. The properties of the simulated AP are in good agreement with experimental data. The AP model describes the attenuation of electrical signal with an increase in the vacuole area and volume; this effect is related to a decrease in the Ca²⁺ spike magnitude. The electrical signal was weakly influenced by the K⁺ and Cl^– content in the vacuole. It was also shown that the contribution of vacuolar IP₃-dependent Ca²⁺ channels into the generation of calcium spike during AP was insignificant with the given parameters of the model. The results provide theoretical evidence for the significance of the vacuolar area and volume in plant cell excitability.     

Phytochemical Analysis and Free Radical Scavenging Activity of Medicinal Plants Gnidia glauca and Dioscorea bulbifera

Gnidia glauca and Dioscorea bulbifera are traditional medicinal plants that can be considered as sources of natural antioxidants. Herein we report the phytochemical analysis and free radical scavenging activity of their sequential extracts. Phenolic and flavonoid content were determined. Scavenging activity was checked against pulse radiolysis generated ABTS^•+ and OH radical, in addition to DPPH, superoxide and hydroxyl radicals by biochemical methods followed by principal component analysis. G. glauca leaf extracts were rich in phenolic and flavonoid content. Ethyl acetate extract of D. bulbifera bulbs and methanol extract of G. glauca stem exhibited excellent scavenging of pulse radiolysis generated ABTS^•+ radical with a second order rate constant of 2.33×10⁶ and 1.72×10⁶, respectively. Similarly, methanol extract of G. glauca flower and ethyl acetate extract of D. bulbifera bulb with second order rate constants of 4.48×10⁶ and 4.46×10⁶ were found to be potent scavengers of pulse radiolysis generated OH radical. G. glauca leaf and stem showed excellent reducing activity and free radical scavenging activity. HPTLC fingerprinting, carried out in mobile phase, chloroform: toluene: ethanol (4: 4: 1, v/v) showed presence of florescent compound at 366 nm as well as UV active compound at 254 nm. GC-TOF-MS analysis revealed the predominance of diphenyl sulfone as major compound in G. glauca. Significant levels of n-hexadecanoic acid and octadecanoic acid were also present. Diosgenin (C₂₇H₄₂O₃) and diosgenin (3á,25R) acetate were present as major phytoconstituents in the extracts of D. bulbifera. G. glauca and D. bulbifera contain significant amounts of phytochemicals with antioxidative properties that can be exploited as a potential source for herbal remedy for oxidative stress induced diseases. These results rationalize further investigation in the potential discovery of new natural bioactive principles from these two important medicinal plants.     

Modulation of H,K-ATPase activity by the molecular chaperone ERp57 highly expressed in gastric parietal cells

ERp57 is a ubiquitous ER chaperone that has disulfide isomerase activity. Here, we found that both ERp57 and gastric H⁺,K⁺-ATPase are expressed in a sample derived from the apical canalicular membranes of parietal cells. Overexpression of ERp57 in HEK293 cells stably expressing H⁺,K⁺-ATPase significantly increased the ATPase activity without changing the expression level of H⁺,K⁺-ATPase. Interestingly, overexpression of a catalytically inactive mutant of ERp57 (C57S/C60S/C406S/C409S) in the cells also increased H⁺,K⁺-ATPase activity. In contrast, knockdown of endogenous ERp57 in H⁺,K⁺-ATPase-expressing cells significantly decreased ATPase activity without changing the expression level of H⁺,K⁺-ATPase. Overexpression and knockdown of ERp57 had no significant effect on the expression and function of Na⁺,K⁺-ATPase. These results suggest that ERp57 positively regulates H⁺,K⁺-ATPase activity apart from its chaperoning function.