A new genus and species of Dipterocarpaceae from the Neotropics. I. Introduction,taxonomy, ecology,and distribution

A new genus and species of Dipterocarpaceae,Pseudomonotes tropenbosii, from Amazonian Colombia is described and illustrated. This new taxon, which appears most closely related to the subfamily Monotoideae, is the second reported occurrence of a member of the family in the Neotropics. The new entity differs from the rest of the Dipterocarpaceae in the absence of fasciculate trichomes and in having sepals conspicuously aliform (reaching 10–16 cm in length) and one ovule per locule with nearly basal (sub-basal) placentation.     

Novel isolation of resveratrol dimer O-glucosides with enantiomeric aglycones from the leaves of Shorea cordifolia

Two O-glucosides of resveratrol dimers, ampelopsin F-11b-O-β-glucopyranosides with enantiomeric aglycones [cordifoloside A (1) and cordifoloside B (2)] and an enantiomer of the aglycone [(?)-ampelopsin F] were isolated from the leaves of Shorea cordifolia (Dipterocarpaceae). These structures were identified on the basis of spectroscopic evidence and their absolute configurations were elucidated using circular dichroism data. This is the first report on oligostilbenoids that demonstrates the co-occurrence of diastereomeric O-glucosides with enantiomeric aglycones in this family.     

Wood and bark anatomy of Muntingiaceae: A phylogenetic comparison within Malvales s. l.

Quantitative and qualitative data on wood and bark anatomy are given for Muntingia calabura L. and Dicraspidia donnell-smithii Standley. These data are compared with phylogenetic schemes, based on DNA analysis, in which Muntingiaceae belong to the “dipterocarp clade” within Malvales. The data are consistent with this hypothesis, although Muntingiaceae lack pit vestures in vessels, which are seen in the other malvalean families (Cistaceae, Dipterocarpaceae, Neuradaceae, Sarcolaenaceae, Thymeleaceae), and this may represent a loss of pit vestures. All families of the dipterocarp clade agree with both genera of Muntingiaceae in having tracheids as the imperforate tracheary element type (at least ancestrally), although fiber-tracheids also occur in some Dipterocarpaceae and Thymeleaceae. The large size of some malvalean families (with attendant greater diversity in character states) and a paucity of wood studies in those families make for difficulty in comparison of features such as axial parenchyma and ray types with those of Muntingiaceae; character states of these features are consistent with placement of Muntingiaceae in the dipterocarp clade of Malvales. Banded phloem fibers in bark of Muntingiaceae are much like those of other Malvales. Wood of Muntingiaceae is highly mesomorphic according to quantitative vessel features.     

Serology and systematics of the Ebenales and the Theales

The systematic position ofthe Ebenaceae, Sapotaceae, Styracaceae, Ochnaceae, Stachyuraceae, Dipterocarpaceae, Clusiaceae and Hypericaceae has been investigated using serological comparisons of sets of antigenic determinants. The results show that the Sytracaceae and Sapotaceae are undoubtedly more closely associated with the Actinidiaeceae and Theaceae, respectively, than with each other. We found no corresponding determinants betnween antigen systems from the Ebenaceae and systems from any other family whose relations to this family have been proposed. As discovered previously, investigations of antigen systems from the Ochnaceae, Dipterocarpaceae, Stachyuraceae, Clusiaceae and Hypericaceae are against the idea of a natural order “Theales” in which these families, or at least some of them, are combined with the Theaceae and Actinidiaceae. This paper completes our previous investigations which largely support a superorder Ericanae sensu Ehrendorfer and Takhtajan. We propose to include the Actinidiaceae and Theaceae in this superorder, assigning them a central position laong with the Sapotaceae and Sytracaeae on one side and the Primulales and Ericales on the other. Another most interesting finding is that there are corresponding determinants between antigen systems from the members of the Ericanae and representatives of the Polemoniaceae and Loasaceae.     

Molecular phylogeny of Dipterocarpaceae in Southeast Asia using RFLP of PCR-amplified chloroplast genes

Dipterocarpaceae is the dominant family of Southeast Asia's climax tropical rain forest region, and it contains the region's most important commercial timber species. A molecular phylogeny of the Dipterocarpaceae subfamily Dipterocapoideae was constructed using restriction fragment length polymorphisms of polymerase chain reaction-amplified specific genes in chloroplast DNA. A total of 141 site changes were detected among ten genera and 30 species in 11 different genes: rbcL, psbA, psbD, rpoB, rpoC, petB, atpH, 16S, psaA, petA and trnK. Phylogenetic trees constructed by Wanger parsimony and neighbor-joining methods, using Upuna as the outgroup, displayed five monophytelic groups that included Upuna: HopeaShorea-Parashorea-Neobalanocarpus; Dryobalanops; Dipterocarpus; Anisoptera-Vatica-Cotylelobium; and Upuna. The phylogenetic trees clearly separate species with two different base chromosome numbers: the first group is x=7, and the other is x=11. The x=7 group is thought to be in a synapomorphic character state. Parashorea lucida is a sister to most Shorea species. Neobalanocarpus heimii and Hopea from a clade of a sister to two Shorea species, and Cotylelobium and Vatica are closely related species. Our conclusions agree with a phylogeny derived from wood anatomy data analysis, and with Symington's and Ashton's taxonomic classifications.The raw data of the PCR-RFLP analysis can be obtained from the authors     

Aspidosperma (Apocynaceae) plant cytotoxicity and activity towards malaria parasites. Part I: Aspidosperma nitidum (Benth) used as a remedy to treat fever and malaria in the Amazon

Infusions of Aspidosperma nitidum (Apocynaceae) wood bark are used to treat fever and malaria in the Amazon Region. Several species of this family are known to possess indole alkaloids and other classes of secondary metabolites, whereas terpenoids, an inositol and the indole alkaloids harmane-3 acid and braznitidumine have been described in A. nitidum . In the present study, extracts from the wood bark, leaves and branches of this species were prepared for assays against malaria parasites and cytotoxicity testing using human hepatoma and normal monkey kidney cells. The wood bark extracts were active against Plasmodium falciparum and showed a low cytotoxicity in vitro, whereas the leaf and branch extracts and the pure alkaloid braznitidumine were inactive. A crude methanol extract was subjected to acid-base fractionation aimed at obtaining alkaloid-rich fractions, which were active at low concentrations against P. falciparum and in mice infected with and sensitive Plasmodium berghei parasites. Our data validate the antimalarial usefulness of A. nitidum wood bark, a remedy that can most likely help to control malaria. However, the molecules responsible for this antimalarial activity have not yet been identified. Considering their high selectivity index, the alkaloid-rich fractions from the plant bark might be useful in the development of new antimalarials.     

How to Make a Beetle Out of Wood: Multi-Elemental Stoichiometry of Wood Decay,Xylophagy and Fungivory

The majority of terrestrial biomass is wood, but the elemental composition of its potential consumers, xylophages, differs hugely from that of wood. This causes a severe nutritional imbalance. We studied the stoichiometric relationships of 11 elements (C, N, P, K, Ca, Mg, Fe, Zn, Mn, Cu, Na) in three species of pine-xylem-feeding insects, Stictoleptura rubra, Arhopalus rusticus (Coleoptera, Cerambycidae) and Chalcophora mariana (Coleoptera, Buprestidae), to elucidate their mechanisms of tissue growth and to match their life histories to their dietary constraints. These beetles do not differ from other Coleoptera in their absolute elemental compositions, which are approximately 1000 (N), 100 (P, Cu) and 50 (K, Na) times higher than in dead but undecayed pine wood. This discrepancy diminishes along the wood decay gradient, but the elemental concentrations remain higher by an order of magnitude in beetles than in highly decayed wood. Numerical simulation of the life history of S. rubra shows that feeding on nutrient-poor undecayed wood would extend its development time to implausible values, whereas feeding on highly decomposed wood (heavily infected with fungi) would barely balance its nutritional budget during the long development period of this species. The changes in stoichiometry indicate that the relative change in the nutrient levels in decaying wood cannot be attributed solely to carbon loss resulting from decomposer respiration: the action of fungi substantially enriches the decaying wood with nutritional elements imported from the outside of the system, making it a suitable food for wood-eating invertebrates.     

Molecular phylogenetic identification of endophytic fungi isolated from resinous and healthy wood of Aquilaria malaccensis,a red listed and highly exploited medicinal tree

Aquilaria malaccensis is a fast-growing, tropical tree belonging to the family Thymelaeaceae and is locally known as Agar. Agarwood formation takes place in the stem or main branches of the tree where an injury has occurred. It is believed that the tree is first attacked by a pathogenic fungus, which causes it to weaken. Most fungal diversity studies have previously been based on morphological examination and cultivation methods. In this study, we used both culture-dependent and culture-independent approaches (metagenomic) to study the endophytic fungi on wood chips of A. malaccensis. The culture-based approach revealed Alternaria, Cladosporium, Curvularia, Fusarium, Phaeoacremonium and Trichoderma as members of the agarwood community. Also analysis of ITS sequencing of these culture isolates provided further verification of the identity of the cultured groups. Analysis of community DNA (metagenome) extracted from both infected and healthy wood samples revealed that the majority of fungi present had highest sequence similarity to members of Dothideomycetes, followed by Sordariomycetes and Saccharomycetes. Thus, morphological and genetic characteristics showed that most isolates from agarwood belong to phylum Ascomycota. A neighbour-joining tree showed the relationships between the isolates sequence data and the closest identified relatives from GenBank.     

Molecular genetic tools to infer the origin of forest plants and wood

Most forest tree species exhibit high levels of genetic diversity that can be used to trace the origin of living plants or their products such as timber and processed wood. Recent progress to isolate DNA not only from living tissue but also from wood and wood products offers new opportunities to test the declared origin of material such as seedlings for plantation establishment or timber. However, since most forest tree populations are weakly differentiated, the identification of genetic markers to differentiate among spatially isolated populations is often difficult and time consuming. Two important fields of “forensic” applications are described: Molecular tools are applied to test the declared origin of forest reproductive material used for plantation establishment and of internationally traded timber and wood products. These applications are illustrated taking examples from Germany, where mechanisms have been developed to improve the control of the trade with forest seeds and seedlings, and from the trade with wood of the important Southeast Asian tree family Dipterocarpaceae. Prospects and limitations of the use of molecular genetic methods to conclude on the origin of forest plants, wood, and wood products are discussed.     

<Emphasis Type="Italic">Camellia nanningensis</Emphasis> sp. nov.: the earliest fossil wood record of the genus <Emphasis Type="Italic">Camellia</Emphasis> (Theaceae) from East Asia

A new species Camellia nanningensis was described on the basis of well-preserved mummified wood from the upper Oligocene Yongning Formation of Nanning Basin in Guangxi Province, South China. This represents the most ancient fossil wood assigned to Camellia, and the earliest fossil record of the family Theaceae in China. This fossil material shows that Camellia occurred in China as early as the late Oligocene, suggesting more ancient radiation of this genus than estimated by molecular dating.     

Chemical constituents from Picrasma quassioides (D.Don) Benn. and their network analysis of chemotaxonomic significance

A phytochemical investigation of Picrasma quassioides (D.Don) Benn led to the isolation of seventeen compounds including five coumarins (1–5), six lignans (6–11), two alkaloids (12–13), two phenolic compounds (14–15), one megastigman glycoside (16) and one phenylpropanoid (17). The structures of those compounds were determined by spectroscopy data of NMR spectra. All of the compounds were isolated from P. quassioides for the first time. In this study, in order to discuss the chemotaxonomic significance of those compounds from P. quassioides, network analysis was carried out to determine the chemotaxonomic relationships among the Simaroubaceae family and the other families. The result showed that the Simaroubaceae family and the Rutaceae family, together with the Asteraceae family have some chemotaxonomic relationships.     

Extraction, amplification and characterization of wood DNA from dipterocarpaceae

A successful DNA extraction from wood yielding appropriate DNA quality for PCR amplification allows molecular genetic investigations of wood tissue. Genotypes, the origin of sampled material, and species can be identified based on an investigation of wood if suitable information on genetic variation patterns within and among species is available. Potential applications are in forensics and in the control of the timber and wood trade. We extracted DNA from wood of Dipterocarpaceae, a family that dominates rainforests and comprises many important timber species in Southeast Asia. Several different DNA isolation techniques were compared and optimized for wood samples from natural populations and from wood processing enterprises. The quality of the DNA was tested by spectrophotometry, PCR amplification, and PCR inhibitor tests. An average DNA yield of 2.2 μg was obtained per 50–100 mg of dried wood sample. Chloroplast DNA (cpDNA) regions of different length were amenable to PCR amplification from the extracted DNA. Modification of DNA isolation techniques by the addition of polyvinylpyrrolidone (PVP) addition up to 3.1% into lysis buffer reduced PCR inhibition effectively. In order to evaluate the extraction method, we analyzed leaves and wood from the same tree by PCR amplification, genotyping and sequencing of chloroplast microsatellites.     

Warm and humid Trans-Himalaya during the late Miocene: plant fossil evidence

Neogene fossil records from the Indus Basin sedimentary rocks (IBSR), deposited in the Indus Tsangpo Suture Zone (ITSZ), are very rare, but are important to understand the history of plant diversity and paleoclimate in the Himalaya. We report fossil wood ascribed to Ebenoxylon siwalicus Prakash from late Miocene sediments of the Karit Formation belonging to ITSZ. The anatomical details of the fossil wood, such as small to medium-sized vessels occluded with tyloses, scanty paratracheal to diffuse-in-aggregate axial parenchyma, 1–3 seriate homo to heterocellular rays, bordered intervessel pits with lenticular apertures and simple perforations, suggest its close affinity with Diospyros Linnaeus of the family Ebenaceae. Further anatomical details suggest a close resemblance with extant D. ehretioides Don and D. macrophylla Blume. The present fossil, along with previously known fossil records of Lagerstroemia (Lythraceae) and palms, indicate that the Trans-Himalaya was warm and humid during the late Miocene, quite different from the modern cool and dry climate in the study area.     

Life-span growth dynamics and xylem anatomical patterns of diffuse-porous Afzelia africana Sm. (Fabaceae) in different ecological zones in Burkina Faso

Tropical West African savannas are exposed to high climatic variability with potential impacts on tree growth, forest dynamics and ecosystem productivity. In such context, understanding the long-term ecological responses of savanna trees to changing environmental conditions is of great relevance for taking appropriate conservation actions. We conducted the first study on tree-ring analysis and quantitative wood anatomy on Afzelia africana Sm. in Burkina Faso, to investigate the life-span growth trajectories and wood anatomical adjustment to site and to climate variations. A total of 24 stem discs was collected in four protected forests along the Sudano-sahelian and the Sudanian climatic zones. Wood samples were analyzed using standard dendrochronological methods and quantitative wood anatomy. The mean annual growth rates varied from 1.002 (± 0.249) mm. year⁻¹ in the Sudanian zone to 1.128 (± 0.436) mm. year⁻¹ in the Sudano-sahelian zone. Analysis of growth trajectories showed high variations within sites and between climatic zones. Wood anatomical traits significantly varied between sites. Principal Component Analysis revealed strong relationships between ring width, wood density and vessel traits, with 82.81 % of the total variance explained. Vessel size significantly increased from the pith to the bark, highlighting the ontogenetic effects on xylem anatomical variations. Inverse relationships were found between vessel size and vessel density across the driest site and the wettest site, suggesting that the higher the rainfall, the taller the tree, the larger vessel size, but the lower vessel density. By contrast, more arid conditions and high evapotranspiration lead to smaller vessel sizes and higher vessel density. Such anatomical adjustments highlight the trade-offs between water conductance efficiency and hydraulic safety, and emphasize physiological responses to climate variability. These variations on the long-term dynamics and xylem anatomical patterns underline complex interactions between ontogenetic effects and contrasting environmental factors that affect the eco-physiological functioning of A. africana throughout the Sudanian region.     

Desertiguana gobiensis gen. et sp. nov., a new lizard (Phrynosomatidae, Iguanomorpha) from the Upper Cretaceous of Mongolia

A new lizard, Desertiguana gobiensis gen. et sp. nov., is described based on a left mandibular fragment from the Upper Cretaceous of Mongolia. Comparative analysis of mandibular structures shows that it belongs to the family Phrynosomatidae sensu Frost et Etheridge, 1988. Some questions of relationships of this family with other Iguanomorpha (Iguanidae sensu lato) are discussed.     

“Out-of-India” dispersal for Adina (tribe Naucleeae; family Rubiaceae): evidence from the early Eocene fossil record from India

This study reports the oldest fossil record of the genus Adina, A. vastanenesis n. sp., from the early Eocene of Vastan lignite mine (Cambay Shale Formation), Surat district, Gujarat. This fossil wood is characterized by diffuse porous wood, predominantly solitary tylosed vessels, simple perforations, scanty paratracheal to diffuse to sometimes diffuse in aggregate axial parenchyma, predominantly uniseriate to occasionally biseriate rays, and non septate fibres with bordered pits and shows its best resemblance with the modern species, Adina multifolia Haviland, belonging to the tribe Naucleeae (subfamily Cinchonoideae) of the family Rubiaceae. The present discovery becomes the first fossil record of the wood of Adina, which provides an insight about the Gondwanan origin either for the genus Adina or the tribe Naucleeae and its further dispersal to Southeast Asia.