冷冻聚焦离子束-扫描电镜成像技术研究进展

冷冻聚焦离子束-扫描电镜成像(Cryo-FIB-SEM)是一种新兴的成像检测技术,在原位进行冷冻聚焦离子束切割和冷冻扫描电镜成像,为研究天然含水状态下生物样品内部未被破坏的原始结构打开了一扇窗口。近年来,该技术在生命科学领域的应用研究取得了一系列重要进展。该文对其在冷冻体积连续成像、冷冻光电关联成像、冷冻透射扫描成像、冷冻含水切片制备监控及冷冻扫描图像处理等方面的研究进展进行综述,并展望了该技术在大体积生物样品三维原位成像研究领域的前沿性发展趋势,以期推动Cryo-FIB-SEM技术在生物样品三维结构研究中的应用。     

生物被膜的形成及其电化学阻抗检测

生物被膜是细菌及其自身分泌的胞外聚合物组成的微生物群落,其形成是受多种机制共同调控的多阶段动态过程,具有较强的耐药性且难以清除,给医疗、食品等行业带来了巨大的威胁。近年来,生物被膜的相关研究领域备受关注,尤其是针对生物被膜的有效检测技术。本文在简要介绍生物被膜的特点、形成过程及群感效应对生物被膜的调控作用基础之上,总结了生物被膜常用的检测方法,重点针对电化学阻抗技术在生物被膜检测中的应用进行调研和讨论,并对基于微流控芯片的生物被膜电化学阻抗原位检测进行了综述和展望。     

微生物修复石油烃土壤污染技术研究进展

随着人民生活水平的提高,环境保护问题愈发受到人们重视。其中石油烃的土壤污染因其持续时间长、污染去除难度大而受到广泛关注。在各类修复技术中,原位微生物修复强化技术因其成本较低、环境影响小、无二次污染、可原位修复的特点成为了当前的技术热门。文中综述了生物投加法、生物刺激法、联合修复法等原位微生物修复技术,并介绍了一些典型工程案例,为原位微生物修复强化技术的选择及工程应用提供了参考,并对未来原位微生物修复强化技术的研究重点进行了展望。     

椭圆偏振术在生物医学研究中的应用

椭圆偏振术是一种新兴的用于研究生物分子固相表面吸附以及吸附分子间相互作用的表面分析技术。其最大优点在于测量过程不破坏被测体系;而且灵敏度高,可反映接近原子尺寸的变化;又能原位、实时跟踪检测表面膜的变化情况。就椭偏术在生物医学研究的若干重要应用进行综述。     

原位分离耦合技术制备生物丁醇的研究进展

笔者对吸附法、液液萃取法、气提法、渗透汽化法等提取技术原位分离耦合丁醇进行了综述,并对其分离特性与效果进行了比较。针对目前原位分离耦合发酵制备生物丁醇的应用现状和面临的挑战,并结合本课题组已取得的成果,对原位分离耦合发酵制备生物丁醇的前景进行了展望。     

微生物的ARDRA检测

ARDRA（扩增性rDNA限制性酶切片段分析）是新发展起来的一项生物检测技术，可在原位下获取其有关生物性状。本文阐述了ARDRA技术的原理和方法，介绍了该技术在微生物多样性和系统发育研究中的应用，并对ARDRA技术的应用前景提出展望。     

适合原位RT-PCR的石蜡切片制作方法

石蜡切片是原位RT-PCR中常用一种生物制片技术,简要阐述原位RT-PCR的原理以及适合于原位RT-PCR的石蜡切片的制作流程,对其易出现的问题和解决办法作了简要的概述。     

原位DNA合成技术

原位ＤＮＡ合成技术李子银,胡会庆（华中农业大学农学系,武汉４３００７０）关键词原位ＤＮＡ合成自六十年代放射标记探针应用于原位分子杂交技术后,人们就可以对特异的核苷酸在原位进行检测,然而,直到八十年代由于非放射性标记探针的使用,原位分子杂交技术才得到了...     

细胞代谢扰动表征技术的研究进展

细胞物质代谢、能量生成和信息传递构成了整体生命运行的基本密码。因此生命代谢的掌控也就体现为对胞内代谢物差异性的实时监控、原位分析和定向干扰。以过往研究者在胞内代谢物分析过程中所采用的技术方法为出发点,简要回顾了传统‘固化’技术方法在胞内代谢扰动分析中所取得的研究进展,重点阐述了基于遗传编码的生物传感器原件在胞内代谢物扰动所取得的最新研究进展和应用中的技术优势。概述了不同类型胞内代谢物检测技术在细胞代谢水平差异性分析方面所存在的限制因素和技术缺陷。展望了不同检测手段在未来医学诊断、药物开发和活细胞原位分析中的应用潜力以及这些检测技术对未来生命健康大数据库建立和智能医疗发展中的应用价值。     

DNA芯片技术研究进展

DNA芯片技术是近年来发展迅速的生物高技术 .其基本过程是采用寡核苷酸原位合成或显微打印手段 ,将大量探针片段有序地固化于支持物如硅芯片的表面 ,然后与扩增、标记的生物样品杂交 ,通过对杂交信号的检测分析 ,即可得出样品的遗传信息 .该技术不仅可以对遗传信息进行定性、定量分析 ,而且扩展到基因组研究和基因诊断等方面的应用 .尽管目前在硬件和软件上还面临一些困难 ,但其发展和应用的前景广阔 .     

红外光谱技术在生物过程监测中的应用

在线监测化学组分的浓度对许多生物过程都是十分必要的。然而,探头需耐高温灭菌的要求和生物体系自身的复杂性给许多分析技术的在线监测带来了困难。近几年,随仪器和数据处理技术的迅速发展,应用红外光谱技术对生物过程的原位或在线监测日益广泛。本文对红外过程分析技术进行了较全面的综述,介绍了红外分析的原理、进展及在生物过程监测中的应用。     

Flow cytometric measurement of telomere length

The regulation of telomere length may be involved in the cellular physiology of senescence, reproduction, cancer, immune response to infection, and possibly immune deficiency. The measurement of telomere length, critical to research in this area, has traditionally been performed by Southern blot analysis, which is cumbersome and time consuming. Several alternative methods have been described in recent years. Some, such as pulsed-field electrophoresis, slot blots, and centromere-to-telomere ratio measurements are essentially improvements to the Southern blot technique. However, other methods such as fluorescent in situ hybridization on metaphase chromosome spreads and flow cytometry-based fluorescent in situ hybridization represent a completely new technical approach to the problem. In this review, we compare methods, with particular emphasis placed on flow cytometric techniques for measuring telomere length in situ and identifying potential areas where improvements may still be made.     

A simple technique for measuring buoyant weight increment of entire, transplanted coral colonies in the field

Estimating the impacts of global and local threats on coral reefs requires monitoring reef health and measuring coral growth and calcification rates at different time scales. This has traditionally been mostly performed in short-term experimental studies in which coral fragments were grown in the laboratory or in the field but measured ex situ. Practical techniques in which growth and measurements are performed over the long term in situ are rare. Apart from photographic approaches, weight increment measurements have also been applied. Past buoyant weight measurements under water involved a complicated and little-used apparatus. We introduce a new method that combines previous field and laboratory techniques to measure the buoyant weight of entire, transplanted corals under water. This method uses an electronic balance fitted into an acrylic glass underwater housing and placed atop of an acrylic glass cube. Within this cube, corals transplanted onto artificial bases can be attached to the balance and weighed at predetermined intervals while they continue growth in the field. We also provide a set of simple equations for the volume and weight determinations required to calculate net growth rates. The new technique is highly accurate: low error of weight determinations due to variation of coral density (< 0.08%) and low standard error (< 0.01%) for repeated measurements of the same corals. We outline a transplantation technique for properly preparing corals for such long-term in situ experiments and measurements.     

Radiosensitivity of murine hemopoietic colony-forming units assayed in situ in the rib and in other marrow sites

The radiosensitivity of murine hemopoietic colony-forming cells, which produce colonies in situ and which were counted at Day 8 after irradiation in sections of the femur, humerus, sternum, and spleen, is characterized by a D0 value of 91 +/- 9 cGy. The radiosensitivity of such cells in the rib was assessed using a new technique measuring regeneration or ablation of marrow in transverse sections of ribs observed at Day 8 after irradiation. The mean D0 value over a range determined using several different criteria was 108 cGy. These results provide evidence for the common assumptions that radiosensitivity measured using conventional transplantation assays reflects radiosensitivity in situ, and that the radiosensitivity of stem cells in different medullary marrow sites is similar. The techniques could be used with other species where assays for stem cells are not available.     

Fluorescence sensing of fermentation parameters using fiber optics

A method has been developed for measuring fermentation parameters such as dissolved oxygen, pH, and cell density that differs from traditional techniques that require electrodes and off-line samples. Fluorescent indicators, each sensitive to a single variable, are dissolved directly into a fermentation broth. A fiber-optic probe fluorimeter measures the fluorescence intensities that can then be correlated with parameter values. In addition, an integrated scatter scanning technique can be used to monitor cell density in situ. Results have been obtained using simulated baker's yeast broth and during actual baker's yeast fermentations.     

Evaluation of techniques used in the assessment of subtidal epibiotic assemblage structure

A comparative study was carried out to evaluate the efficiency of a number of techniques commonly used for assessing the structure of subtidal epifaunal communities. Assessments were made of the epifaunal assemblages fouling two substrata: concrete and PVC plastic. Where possible, each technique was undertaken in three ways, namely, in situ underwater, in the laboratory and using image analysis on photographs taken in situ. Comparisons were also made of biomass estimates made on samples taken in situ and in the laboratory. All method and technique combinations assessed detected differences in the epibiotic communities associated with the two fouling substrata. Sampling in situ, in the laboratory and using image analysis gave similar estimates of percent cover. However, there were significant differences in measurements made for most taxa with respect to abundance and frequency counts depending on how the technique was carried out. Laboratory-based sampling of abundance and frequency counts and biomass determinations, rather than in situ or image-analysis based sampling, are recommended for use in future studies of epifaunal fouling.     

Accurate and high resolution in situ hybridization analysis of gene expression in secondary stem tissues

Accurate in situ hybridization analysis in secondary stem tissues of plants has been hindered by specific characteristics of these tissues. First, secondary cell walls non-specifically bind probes used for in situ hybridization thus preventing gene expression analysis in the lignified regions of the stem, such as the xylem. Second, the mRNA in the cambial meristem and its recent derivatives are prone to inadequate fixation when conventional techniques are used. Here we describe an in situ hybridization technique which uses fast freezing and freeze substitution to cryoimmobilize the mRNA followed by embedding in a methacrylate resin for high-resolution analysis of gene expression. By using a transgenic poplar line harbouring rolC:uidA, rolC:iaaM, the gene expression pattern could be compared with histochemical GUS staining. This in situ hybridization technique results in superior preservation of cellular contents, retention of mRNA in all cell types in the poplar stem, a significant reduction of non-specific binding to secondary cell walls and a resolution not previously possible in secondary tissues. This technique will be particularly valuable for the expression analysis of genes involved in xylogenesis and wood formation.     

HRAS1-selected, chromosome mediated gene transfer; in situ hybridization with combined biotin and tritium label localizes the oncogene and reveals duplications of the human transgenome

Chromosomes isolated from a human bladder carcinoma cell line which contains the actively transforming oncogene HRAS1 on chromosome 11 can be used to transform mouse cells. We have analyzed these chromosome mediated gene transformants by in situ hybridization techniques using biotinylated human DNA and a double antibody detection system to visualize the whole of the transgenome in a number of cell lines. In some transformants, where the amount of the transgenome was below the level of detection by the simple biotin system, we used a gold-silver enhancement technique. We have developed a combined in situ hybridization procedure using biotinylated human DNA plus antibodies and 3H-labeled HRAS1 DNA plus autoradiography to locate the actively transforming oncogene within the human transgenome in a selection of these transformants. In each of these there were complex insertions of the transgenome, either at multiple sites or with duplicated inserts at a single site. Each insertion contained a copy of HRAS1. The double in situ hybridization analysis helps define the types of arrangement and rearrangement which can accompany the chromosome mediated gene transfer process and, consequently, the potentials and limitations of the technique as a somatic cell and molecular genetic tool. Our analysis also suggests that multiple copies of the HRAS1 gene may be needed for stable transformation.     

普通小麦-簇毛麦6V代换系45S rDNA和5S rDNA位点的FISH分析

采用顺序基因组原位杂交和双色荧光原位杂交技术,对普通小麦-簇毛麦6v代换系K0736的45S rDNA和5S rDNA基因位点进行了分析.结果表明,该代换系2n=42,有1对簇毛麦6V染色体,为6V/6A代换系,45S rDNA位点有8对,位于7对染色体上.5S rDNA位点有6对,分别位于6对染色体上.在1AS、1BS、5DS的端部同时存在458 rDNA和5S rDNA位点,并在物理位置上紧密相邻.同时讨论了rDNA位点的数目和分布位置存在变异的可能因素.