Bacterial community dynamics in aerated cow manure slurry at different aeration intensities

Aims: This study aimed to characterize microbial community dynamics in aerated cow manure slurry at different aeration intensities. Methods and Results: Batch aerobic treatments were set up in 5‐l jar fermentor, each containing 3 l of manure slurry; the slurries were subjected to low, medium and high (50, 150 and 250 ml min^?1, respectively) aeration for 9 days. Microbial community composition was determined using terminal restriction fragment length polymorphism and a clone library targeting 16S rRNA genes. High and medium aeration accelerated organic carbon degradation in parallel with the degree of aeration intensity; however, 90% of the initial total organic carbon was retained during low‐aeration treatment. During the active stages of organic carbon decomposition, clones belonging to the class Bacilli accumulated. Moreover, Bacilli accumulation occurred earlier under high aeration than under medium aeration. Conclusions: Organic matter degradation was mainly governed by a common microbial assemblage consisting of many lineages belonging to the class Bacilli. The timing of community development differed depending on aeration intensity. Significance and Impact of the Study: This study reports on changes in several environmentally important parameters and the principal microbial assemblage during the pollution‐reducing phase of cattle manure aeration treatment.     

Profiles of toxic and non-toxic oligopeptides of Radiocystis fernandoii (Cyanobacteria) exposed to three different light intensities

Cyanobacteria produce a high variety of bioactive oligopeptides, which function, ecological, physiological roles and responses to environmental changes are still unclear. The influence of light intensity on the cell quota and the diversity of oligopeptides of two strains of the cyanobacterium Radiocystis fernandoii were experimentally tested. The peptides were quantified by HPLC and identified by a MALDI-TOF-TOF. Microcystins (MC) were generally more abundant in the treatment with low light. A compensatory mechanism was observed for the different variants of microcystin, whereby MC-RR responses were contrary to those observed for the other three variants and showed higher concentration in the treatment with intermediate light. Two microviridins were also produced at higher amounts at intermediate irradiance. For cyanopeptolins and a third microviridin no significant difference among treatments was found. The absence of a similar response for all peptides suggests that these compounds may have unique cellular functions, which better understanding could help explaining changes in toxicity. Finally, we observed that each chemical profile reflected in physiological differences between strains, strengthening the idea that chemotypes may act as distinct ecotypes in nature.     

中国木本植物幼苗生长对光照强度的响应

光照是影响植物幼苗生长的重要的环境因子,定量化研究光照对木本植物不同生活型幼苗生长的影响具有重要意义。系统收集了有关光照对我国木本植物幼苗生长影响的国内外文献,采用Meta分析的方法对幼苗的生长效应进行评估。研究结果表明:(1)与全光照下幼苗生长相比,由于遮阴处理对幼苗基径增长量的抑制作用强于对株高增长量的作用,幼苗出现株高基面积比增高的形态特征变化;(2)与灌木相比,乔木树种幼苗对不同光照强度的响应更加敏感;(3)在小于20%和20%—40%全光照条件下,落叶阔叶和常绿阔叶树种幼苗基径均受到显著抑制,而常绿针叶树种的基径并没有受到遮阴的明显抑制;(4)落叶阔叶和常绿阔叶树种的株高基面积比均显著高于全光照,而常绿针叶树种的株高基面积比与全光照相比差异较小。我们的这一研究将有助于更好的理解木本植物幼苗生长对光照的响应机理。     

Defining seasonal marine microbial community dynamics

Here we describe, the longest microbial time-series analyzed to date using high-resolution 16S rRNA tag pyrosequencing of samples taken monthly over 6 years at a temperate marine coastal site off Plymouth, UK. Data treatment effected the estimation of community richness over a 6-year period, whereby 8794 operational taxonomic units (OTUs) were identified using single-linkage preclustering and 21 130 OTUs were identified by denoising the data. The Alphaproteobacteria were the most abundant Class, and the most frequently recorded OTUs were members of the Rickettsiales (SAR 11) and Rhodobacteriales. This near-surface ocean bacterial community showed strong repeatable seasonal patterns, which were defined by winter peaks in diversity across all years. Environmental variables explained far more variation in seasonally predictable bacteria than did data on protists or metazoan biomass. Change in day length alone explains >65% of the variance in community diversity. The results suggested that seasonal changes in environmental variables are more important than trophic interactions. Interestingly, microbial association network analysis showed that correlations in abundance were stronger within bacterial taxa rather than between bacteria and eukaryotes, or between bacteria and environmental variables.     

Cyclic AMP response in cells exposed to electric fields of different frequencies and intensities

The action on intracellular cyclic AMP (cAMP) of therapeutically used 4000-Hz electric fields was investigated and compared with 50-Hz data. Cultured mouse fibroblasts were exposed for 5 minutes to 4000-Hz sine wave internal electric fields between 3 mV/m and 30 V/m applied within culture medium. A statistically significant decrease in cellular cAMP concentration relative to unexposed cells was observed for fields higher than 10 mV/m. The drop in cAMP was most pronounced at lower field strengths (71 % of controls at 30 mV/m) and tended to disappear at higher field strengths. An increase of cAMP content was observed with 50-Hz electric fields, as was also the case when 4000-Hz fields were modulated with certain low frequencies.     

Effects of different light intensities in the morning on dim light melatonin onset

The present study evaluated the effects of exposure to light intensity in the morning on dim light melatonin onset (DLMO). The tested light intensities were 750 lux, 150 lux, 3000 lux, 6000 lux and 12,000 lux (horizontal illuminance at cornea), using commercial 5000 K fluorescent lamps. Eleven healthy males aged 21-31 participated in 2-day experiments for each light condition. On the first experimental day (day 1), subjects were exposed to dim light (<30 lux) for 3 h in the morning (09:00-12:00). On the same day, saliva samples were taken in dim light (<30 lux) every 30 min from 21:00 to 01:00 to determine the DLMO phase. The subjects were allowed to sleep from 01:00 to 08:00. On the second experimental day (day 2), the subjects were exposed to experimental light conditions for 3 h in the morning. The experimental schedule after light exposure was the same as on day 1. On comparing day 2 with day 1, significant phase advances of DLMO were obtained at 3000 lux, 6000 lux and 12,000 lux. These findings indicate that exposure to a necessary intensity from an ordinary light source, such as a fluorescent lamp, in the morning within one day affects melatonin secretion.     

Thermoregulatory responses in humans during exercise after exposure to two different light intensities

The effects after exposure to two different light intensities (dim, 50 lx and bright, 5000 lx) on thermoregulatory responses during exercise in a climatic chamber (27 degrees C, 60% relative humidity) were studied in nine untrained female subjects, aged 19-22 years. The subjects were in either the dim or bright light intensities from 0600 hours to 1200 hours. They were then instructed to exercise on a cycle ergometer at an intensity of 60% maximal oxygen uptake from 1200 hours to 1300 hours in a light intensity of 500 Ix. The main results can be summarized as follows. Firstly, exercise-induced increases of core temperature were significantly smaller, after exposure to the bright than after the dim light intensities, although both tests were performed in the same light intensity. Secondly, body mass loss after exercise was significantly greater after exposure to the bright light intensity. Thirdly, an increase in salivary lactic acid during exercise was significantly lower after the bright intensity. Fourthly although the salivary melatonin level was not different between the two light intensities both before and after the exercise, it increased significantly during exercise only after the bright intensity. These results are discussed in terms of the establishment of a lower set-point in the core temperature after exposure to a bright light intensity.     

Operation performance and microbial community dynamics of phosphorus removal sludge with different electron acceptors

Operation performances of phosphorus removal sludge with different electron acceptors in three parallel SBRs were firstly compared in the present study, and the effect of post-aeration on denitrifying phosphorus removal was also studied. Moreover, community dynamics of different phosphorus removal sludge was systematically investigated with high-throughput sequencing for the first time. TP removal rates for nitrate-, nitrite-, and oxygen-based phosphorus removal sludge were 84.8, 78.5, and 87.4 %, with an average effluent TP concentration of 0.758, 0.931, and 0.632 mg/l. The average specific phosphorus release and uptake rates were 20.3, 10.8, and 21.5, and 9.43, 8.68, and 10.8 mgP/(gVSS h), respectively. Moreover, electron utilization efficiency of denitrifying phosphorus removal sludge with nitrate as electron acceptor was higher than nitrite, with P/e^? were 2.21 and 1.51 mol-P/mol-e^?, respectively. With the assistance of post-aeration for nitrate-based denitrifying phosphorus removal sludge, settling ability could be improved, with SVI decreased from 120 to 80 and 72 ml/g when post-aeration time was 0, 10, and 30 min, respectively. Moreover, further phosphorus removal could be achieved during post-aeration with increased aeration time. However, the anoxic phosphorus uptake was deteriorated, which was likely a result of shifted microbial community structure. Post-aeration of approximately 10 min was proposed for denitrifying phosphorus removal. Nitrate- and nitrite-based denitrifying phosphorus removal sludge exhibited similar community structure. More phosphorus accumulating organisms were enriched under anaerobic–aerobic conditions, while anaerobic–anoxic conditions were favorable for suppressing glycogen-accumulating organisms. Significant differences in pathogenic bacterial community profiles revealed in the current study indicated the potential public health hazards of non-aeration activated sludge system.     

Polar lipids and pigments as biomarkers for the study of the microbial community structure of solar salterns

Whole community lipids and pigments have been examined over a 3–5-year period in commercial salterns located in the United States, Israel, and Spain. There were significant differences in the types of lipids and pigments within the California saltern system during the 5-year period. These patterns differed seasonally despite examination of ponds with approximately the same salinities. The solar saltern in Eilat, Israel had fewer lipids on the thin-layer chromatography plates and confirmed previous analyses. The biota in the crystallizer pond in Alicante, Spain, resembled the microbial community in Israel. In the crystallizers at all three locations, phosphatidyl glycerol, methyl-phosphatidyl glycerophosphate, phosphatidyl glycerosulfate, and the sulfated diglycosyldiether lipid were identified regardless of season. This was not true for pans with salinities below 25% where no distinctive pattern was observed. Thus, we hypothesize that the more eutrophic inlet waters of the California saltern and the cooler temperatures, which result in longer retention times of water in the different pans, allow for the more diverse microbial community to develop. This is reflected then in more complex lipid and pigment patterns. However, the oligotrophic inlet waters to the Eilat saltern coupled with a drier and warmer climate result in a shorter retention time of water in the pans and a less diverse microbial community as evidenced by fewer extractable lipids and pigments.     

Effect of nutrient periodicity on microbial community dynamics

When microbes are subjected to temporal changes in nutrient availability, growth rate and substrate affinity can contribute to competitive fitness and thereby affect microbial community structure. This hypothesis was tested using planktonic bacterial communities exposed to nutrient additions at 1-, 3-, 7-, or 14-day intervals. Growth rates after nutrient addition were inversely proportional to the pulse interval and declined from 0.5 h(-1) to 0.15 h(-1) as the pulse interval increased from 1 to 14 days. The dynamics of community structure were monitored by 16S rRNA gene PCR-denaturing gradient gel electrophoresis. At pulse intervals of more than 1 day, the community composition continued to change over 130 days. Although replicate systems exposed to the same pulse interval were physiologically similar, their community compositions could exhibit as much dissimilarity (Dice similarity coefficients of <0.5) as did systems operated at different intervals. Bacteria were cultivated from the systems to determine if the physiological characteristics of individual members were consistent with the measured performance of the systems. The isolates fell into three bacterial divisions, Bacteroidetes, Proteobacteria, and Actinobacteria. In agreement with community results, bacteria isolated from systems pulsed every day with nutrients had higher growth rates and ectoaminopeptidase specific activities than isolates from systems pulsed every 14 days. However, the latter isolates did not survive starvation longer than those provided with nutrients every day. The present study demonstrates the dynamic nature of microbial communities exposed to even simple and regular environmental discontinuities when a substantial pool of species that can catabolize the limiting substrate is present.     

不同放牧与围封高寒灌丛草地土壤微生物群落结构PLFA分析

土壤微生物群落可以指示土壤质量变化,是土壤生态系统变化的预警及敏感指标。采用磷脂脂肪酸(PLFA)分析方法研究了高寒杜鹃灌丛草地不同强度放牧及围封后,土壤微生物群落结构特征的变化规律和响应。结果显示,高寒杜鹃灌丛草地土壤总PLFA量、细菌生物量、真菌生物量和放线菌生物量均随着放牧强度的增大而显著降低(P0.05)。重牧灌丛草地,围封后的土壤总PLFA量、细菌生物量、放线菌生物量、G~+/G~-和压力指数显著高于放牧处理,而细菌/真菌比显著低于放牧处理;中牧灌丛草地,围封后的土壤总PLFA量、细菌生物量、细菌/真菌比显著高于放牧处理,而真菌生物量和压力指数显著低于放牧处理;轻牧灌丛草地,围封处理的土壤各生物量和生物量比值与放牧处理无显著差异。PLFA主成分分析表明:主成分一(PC1)主要包括14:0、15:0、10Me16:0和18:1ω9c等直链饱和脂肪酸和单不饱和脂肪酸,占PC1的53.68%;主成分二(PC2)主要包括由i16:0、16:1ω7c、i17:0、cy17:0、17:0、18:1ω9t、18:0和cy19:0等支链饱和脂肪酸和环丙烷脂肪酸组成,占PC2的51.34%;各处理样地土壤微生物群落结构相似;围封处理的响应程度大于放牧处理。相关性分析表明,土壤总PLFA量、细菌生物量、真菌生物量和放线菌生物量与土壤有机碳、全氮均呈极显著正相关,细菌/真菌比值与土壤有机碳、全氮呈极显著负相关。以上表明过度放牧降低了高寒灌丛草地土壤微生物活性,显著降低了土壤微生物生物量,适度放牧和围封可维持土壤微生物群落结构的稳定,围封有利于过度放牧草地土壤微生物的恢复。     

Photoacclimation characteristics of Sargassum thunbergii germlings under different light intensities

The photosynthesis and growth responses of Sargassum thunbergii germlings to different light intensities (10, 60, and 300 μmol photons m^?2 s^?1) were investigated. Maximum photochemical efficiency (F _v/F _m), rapid light curves (RLCs), and photochemical and non-photochemical quenching (qP and NPQ) were estimated by a pulse amplitude-modulated fluorometer. The photosynthesis of S. thunbergii germlings exhibited different properties to optimize light capture and utilization. The excitation pressure (1???qP) was rapidly increased to approximately 0.27 showing that germlings responded to high light by chronic photoinhibition with an accumulation of closed reaction centers, which ultimately resulted in a slow growth. This was accompanied by a reduced F _v/F _m with time and a development of high capacity for NPQ. Although F _v/F _m in moderate-light germlings did not fully recover overnight, germlings demonstrated a less severe chronic photoinhibition considering the reduced degree of excitation pressure accumulation of approximately 0.15. The relative stability of photosynthetic capacity (rETR_max, E _k, and α) could endow germlings with the highest relative growth rate (RGR) of approximately 9.3 % day^?1 in moderate light. By contrast, low-light germlings demonstrated high F _v/F _m and F _o, corresponding high α collectively suggested greater efficiency of light absorption and energy transformation. Sustained increases in electron transport capacity (rETR_max and E _k) occurred in low-light germlings, which resulted in a stable RGR of over 8.2 % day^?1. Consequently, S. thunbergii germlings are considered to prefer low light regimes and have a relative capacity of moderate and high light tolerance. However, the light acclimation to oversaturating conditions is at the cost of slow growth to maintain survival.     

香果树(Emmenopterys henryi)幼苗生长特性和叶绿素荧光对不同光强的响应

研究了室内人工气候箱中相对高、中和低（（5000&#177;230）lx、（2200&#177;110）lx和（1000&#177;80）lx）光强下香果树幼苗的生长特性及荧光参数的动态变化,结果表明,中光强下的幼苗生长迅速,株高和生物量一直维持最高水平;高光强下的幼苗,生长极其缓慢,株高和生物量均处于最低水平;低光强下的幼苗比叶面积最大;而根冠比则以高光强下的为最高;叶绿素（a＋b）含量在低光强下最高,中光下次之,强光下最小。前期,低光强下幼苗叶片的叶绿素a/b值较大,随着幼苗的生长呈下降的趋势,120d后与其他处理相比达到最小。荧光参数的结果显示,高光强下,香果树幼苗的电子传递速率（ETR）、光化学猝灭系数（qP）和非光化学猝灭系数（qNP）均处于最低水平,而测定初始荧光（Fo）和最大荧光（Fm）却处于最高水平,在低和中光强下则刚好相反。由此可见,高光强对香果树幼苗生长极其不利,而低和中光强下生长较好。建议在室内培育香果树幼苗时,适当减弱光强,保证其正常生长。     

杉木种子萌发及幼苗生长对光强的响应

设置不同光强梯度(透光率分别为100%、40%、20%、10%和5%,光照强度PPFD分别为201.3、77.0、37.5、19.2、9.8 μmol·m^-2·s^-1),研究光对杉木种子萌发和幼苗早期生长的影响,分析杉木种子萌发、幼苗存活、生长、形态响应、生物量积累及其分配格局对不同光环境的响应策略.结果表明: 杉木种子的萌发率、存活率、建植率和萌发指数在不同光强梯度下均有显著差异,且40%的透光率是种子最适萌发条件,萌发率最高,而全光照下存活率和建植率最高;随光照强度的减弱,杉木幼苗茎长增大,根长、子叶长、子叶厚、真叶数呈降低趋势,而基径在各光照强度间无显著差异;总生物量、根生物量、茎生物量、叶生物量均表现为全光照下最大.随着光照强度的减弱,光合组织与非光合组织生物量比、叶生物量比呈降低趋势,茎生物量比呈增加趋势,根冠比和根生物量比无显著差异.弱光环境促进杉木种子萌发,不利于杉木幼苗存活和生长.在弱光环境下,杉木幼苗通过增大茎生物量来提高对弱光环境的耐受力.     

Response of soil bacterial community structure to successive perturbations of different types and intensities

In soil, genetic structure modifications of indigenous bacterial community consecutively to a severe stress (mercury contamination) were delayed when the community was pre-exposed to various minor perturbations (heat, copper and atrazine). Such minor perturbations induced transitory community structure modifications leading to an increase of community stability towards a severe mercury stress. These results illustrated well the short-term pre-adaptation process for bacterial community hypothesizing that community submitted to perturbations become more resistant to withstand another stress.     

The diversity and function of soil microbial communities exposed to different disturbances

To improve understanding of the relationship between the diversity and function of the soil ecosystem, we investigated the effect of two different disturbances on soil bacterial communities—long-term exposure to the heavy metal mercury and transient exposure to the antibiotic tylosin. In the mercury-contaminated soil the diversity (Shannon index) was reduced as assessed from denaturing gradient gel electrophoresis (DGGE) of amplified 16S rDNA sequences from the soil community DNA and from colony morphology typing of the culturable bacterial population. However, analysis of the substrate utilization profiles did not reveal any differences in diversity. In the tylosin-treated soil, DGGE revealed a small difference in the diversity of 16S rDNA compared to the control soil, whereas analysis of the colony morphology typing or substrate utilization results did not reveal any differences in diversity. Soil function was also affected by mercury contamination. The lag time before soil respiration increased following addition of glucose or alfalfa substrate was longer in the mercury-contaminated soil than in the control soil. Moreover, it was markedly prolonged in mercury-contaminated soil subjected to heat treatment prior to substrate addition, thus indicating reduced resistance to a new disturbance in the mercury-contaminated soil as compared to the control soil. Tylosin treatment did not have any significant effect on any of the respiration parameters measured, either with or without prior heat treatment of the soil.     

Effects of day-time exposure to different light intensities on light-induced melatonin suppression at night

Background

Bright nocturnal light has been known to suppress melatonin secretion. However, bright light exposure during the day-time might reduce light-induced melatonin suppression (LIMS) at night. The effective proportion of day-time light to night-time light is unclear; however, only a few studies on accurately controlling both day- and night-time conditions have been conducted. This study aims to evaluate the effect of different day-time light intensities on LIMS.

Methods

Twelve male subjects between the ages of 19 and 23 years (mean ± S.D., 20.8 ± 1.1) gave informed consent to participate in this study. They were exposed to various light conditions (<10, 100, 300, 900 and 2700 lx) between the hours of 09:00 and 12:00 (day-time light conditions). They were then exposed to bright light (300 lx) again between 01:00 and 02:30 (night-time light exposure). They provided saliva samples before (00:55) and after night-time light exposure (02:30).

Results

A one-tailed paired t test yielded significant decrements of melatonin concentration after night-time light exposure under day-time dim, 100- and 300-lx light conditions. No significant differences exist in melatonin concentration between pre- and post-night-time light exposure under day-time 900- and 2700-lx light conditions.

Conclusions

Present findings suggest the amount of light exposure needed to prevent LIMS caused by ordinary nocturnal light in individuals who have a general life rhythm (sleep/wake schedule). These findings may be useful in implementing artificial light environments for humans in, for example, hospitals and underground shopping malls.