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Tsuyoshi Ito Daisuke Koyabu 《Journal of Zoological Systematics and Evolutionary Research》2018,56(4):599-610
Despite the growing literature on the underlying factors of geographical phenotypic variation, little is known about how and to what extent biogeographic barriers in South‐East Asia have shaped morphological variation in primates. We aimed to investigate the geographical variations in skull morphology in dusky leaf monkeys by decomposing them into clinal (latitudinal), non‐clinal spatial (discrete difference between regions north and south of the Isthmus of Kra), and environment‐related components. We applied geometric morphometrics to measure 53 adult male specimens from 36 localities, covering the regions both north and south of the Isthmus of Kra. A linear model was used to test the effects of region (north vs. south of the Isthmus of Kra), latitude, and environmental factors (temperature and rainfall) on the size and shape of skulls. A part of variation in skull shape differed moderately between the regions in the north and south of the Isthmus of Kra, and this difference cannot be explained by latitudinal and environmental factors. However, for size and the majority of variations in shape, we detected limited contributions of region and the two environmental factors. Shape differentiation that was unexplained by latitudinal and environmental factors suggests that dusky leaf monkeys may have experienced a population division due to habitat constriction around the Isthmus of Kra. However, this divergence probably has been obscured by subsequent gene flow between populations after habitat recovery. 相似文献
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Shu‐Jin Luo Yue Zhang Warren E. Johnson Lin Miao Paolo Martelli Agostinho Antunes James L. D. Smith Stephen J. O'Brien 《Molecular ecology》2014,23(8):2072-2092
The dynamic geological and climatological history of Southeast Asia has spawned a complex array of ecosystems and 12 of the 37 known cat species, making it the most felid‐rich region in the world. To examine the evolutionary histories of these poorly studied fauna, we compared phylogeography of six species (leopard cat Prionailurus bengalensis, fishing cat P. viverrinus, Asiatic golden cat Pardofelis temminckii, marbled cat P. marmorata, tiger Panthera tigris and leopard P. pardus) by sequencing over 5 kb of DNA each from 445 specimens at multiple loci of mtDNA, Y and X chromosomes. All species except the leopard displayed significant phylogenetic partitions between Indochina and Sundaland, with the central Thai–Malay Peninsula serving as the biogeographic boundary. Concordant mtDNA and nuclear DNA genealogies revealed deep Indochinese–Sundaic divergences around 2 MYA in both P. bengalensis and P. marmorata comparable to previously described interspecific distances within Felidae. The divergence coincided with serial sea level rises during the late Pliocene and early Pleistocene, and was probably reinforced by repeated isolation events associated with environmental changes throughout the Pleistocene. Indochinese–Sundaic differentiations within P. tigris and P. temminckii were more recent at 72–108 and 250–1570 kya, respectively. Overall, these results illuminate unexpected, deep vicariance events in Southeast Asian felids and provide compelling evidence of species‐level distinction between the Indochinese and Sundaic populations in the leopard cat and marbled cat. Broader sampling and further molecular and morphometric analyses of these species will be instrumental in defining conservation units and effectively preserving Southeast Asian biodiversity. 相似文献
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Ignacio Ferro 《Mammalian Biology》2013,78(5):322-331
The aim of this research is to relate patterns of endemism and turnover along a local elevation gradient in northwest Argentina with continental biogeographical transitions. Specimen based records constituted the principal source of information to infer rodent distribution along the elevation gradient. I assessed elevational variation of richness, endemism and turnover by means of non-linear regression analysis. Then I identified five distributional patterns based on the overlap of species geographic range. Their frequency along elevation was used to validate biogeographical boundaries inferred by turnover rates. Eleven species out of 37 (30%) are endemic to the study area. Species richness and endemism were hump-shaped. The rate of endemism reached its maximum value at the upper limit of the forest (2500 m). By contrast, species turnover was U-shaped, with a small peak at 1500 m and a maximum at 3500 m. The species’ geographic range patterns were not randomly distributed along elevation but agglomerated at specific elevation. Species turnover and chorological analysis suggest two biogeographical boundaries, a weaker at 1500 m and a stronger at 3500 m. The 1500 m boundary marks the transition from assemblages dominated by Lowland-widespread fauna at lower elevation to Montane (Andean eastern slopes) species at middle elevation. This boundary is characterized by moderate species turnover and high species richness. The strong turnover rate at 3500 and the dominance of highland Andean and Andean-Patagonian species above this elevation suggest the occurrence of the transition between the Neotropical and Andean regions; which is characterised by an almost complete species replacement. 相似文献
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Aim We describe the distributions of mammal species between the Indochinese and Sundaic subregions and examine the traditional view that the two faunas show a transition near the Isthmus of Kra on the Thai–Malay peninsula. Location Species distributions are described along a 2000‐km transect from 20° N (northernmost Thailand) to 1° N (Singapore). Methods For the 325 species of native non‐marine mammals occurring along the transect we used published records to provide a database of their distributional records by degree of latitude. Results Along the transect we found 128 Indochinese species with southern range limits, 121 Sundaic species with northern range limits, four un‐assignable endemics and 72 widespread species. In total, 152 southern and 147 northern range limits were identified, and their distribution provides no evidence for a narrow faunal transition near the Isthmus of Kra (10°30′ N) or elsewhere. Range limits of both bats and non‐volant mammals cluster in northernmost peninsular Malaysia (5° N) and 800 km further north, where the peninsula joins the continent proper (14° N). The clusters of northern and southern range limits are not concordant but overlap by 100–200 km. Similarly, the range limits of bats and non‐volant mammals cluster at slightly different latitudes. There are 30% fewer species and range limits in the central and northern peninsula (between 6 and 13° N), and 35 more widely distributed species have range gaps in this region. In addition, we found 70 fewer species at the southern tip of the peninsula (1° N) than at 3–4° N. Main conclusions The deficiencies of both species and species range limits in the central and northern peninsula are attributed to an area effect caused by repeated sea‐level changes. Using a new global glacioeustatic curve developed by Miller and associates we show that there were > 58 rapid sea‐level rises of > 40 m in the last 5 Myr that would have resulted in significant faunal compression and local population extirpation in the narrow central and northern parts of the peninsula. This new global sea‐level curve appears to account for the observed patterns of the latitudinal diversity of mammal species, the concentration of species range limits north and south of this area, the nature and position of the transition between biogeographical subregions, and possibly the divergence of the faunas themselves during the Neogene. The decline of species diversity at the southern end of the transect is attributed to a peninsula effect similar to that described elsewhere. 相似文献
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通过南海北部大陆架某钻孔(Y6)和西太平洋DSDP 296钻孔第三纪地层中超微化石群进行直接对比,同时收集Lohmann和Carlson(1981)对17个太平洋深海钻孔、Ellis(1973)对DSDP31航次7个钻孔超微化石研究资料进行间接对比,发现边缘海和大洋第三纪钙质超微化石群的分布有着不同特点,表现在;(1)边缘海陆架地区化石丰度低,而大洋丰度高,是边缘海陆架区的37倍。(2)边缘海陆架地区化石分异度低。(3)小型钙质超微化石在边缘海陆架地区含量丰富,而大个体类型在大洋中含量高。(4)Sphenolithus和 Helicosphaera在边缘海陆架地区多,而 Discoaster在大洋中含量高,几近前者的15倍。文中最后对造成这种差别的原因进行了讨论。 相似文献
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A distinct vertical zonation was observed among diatoms in a bottom congelation ice community at McMurdo Sound, Antarctica during the 1981 spring bloom. The bottom 20 cm of ice collected in December from four stations with variable snow cover was subdivided into 5 cm sections for analysis of algal distribution. Algal abundance was inversely related to the depth of snow cover, and generally decreased with increasing distance above the ice-water interface. Most diatoms, including the dominant species Nitzschia stellata Manguin, Amphiprora kufferathii Manguin and Fragilaria islandica var. adeliae Manguin showed peak abundance in the bottom 10 cm of the ice, where the proportion of living to empty cells was also highest. Two species, however, an Auricula Castracane sp. and Navicula glaciei van Heurck, reached highest concentrations at depths 10–20 cm above the ice-water interface. We considered two factors as contributing to the observed vertical zonation: (1) successive blooms at the ice-water interface become spatially stratified within the ice by further accretion below; (2) a differential growth of species occurs along physicochemical gradients within the ice column. A comparison of early versus late season profiles suggests the latter mechanism may prevail once ice accretion has ceased. 相似文献
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Erik Meijaard 《Journal of Biogeography》2003,30(8):1245-1257
Aim The environments that existed in south‐east Asian islands during the last glacial are poorly known, limiting our understanding of mammalian biogeography in the region. The objective of this research is to investigate the ecological characteristics of mammal faunas on small islands, and to see whether the habitat requirements of the species in those faunas can be used to deduct the vegetation types that existed on islands before becoming isolated by rising sea levels. Location The maps presented here cover the small islands of tropical south‐east Asia, including the Burmese, Thai and Cambodian islands in the north, the islands off the coast of west Sumatra in the west, the islands around Java in the south, and the islands off the east coast of Borneo in the east, including the Philippine islands of Palawan and those in the Sulu Archipelago. Methods The presence records of mammal species on 215 small islands in the region were compiled, and the habitat requirements for each of these species was assessed (species that had probably been introduced by humans were excluded from the analysis). For each island location (longitude and latitude), maximum altitude of the island, total area, depth to nearest land, distance to nearest island, and distance to nearest mainland were assessed. Geographical and statistical analyses were used to investigate patterns of mammalian habitat requirements. Results The geographical analysis showed that forest‐dependent species, i.e. species that are only found in primary forest (lowland and mountainous), appear to be concentrated on islands off west Sumatra, in the Lingga and Riau Archipelagos, around Palawan, and around Bunguran Island; they are absent mostly from the islands of the Java Sea, those off the east coast of eastern Borneo, from most islands in the Sunda Strait, several islands in the northern South China Sea, and from all islands off the west coast of the Malay/Thai Peninsula and in the Gulf of Thailand. Species that generally occur outside primary forest, that is those in secondary forest, gardens, plantations and open areas mostly occurred on islands where the forest‐dependent species were absent. The statistical analysis showed that latitude and size of islands were important factors that determined the absence and presence of forest‐dependent species on small islands. Main conclusions The data suggest that during the last glacial there were several areas in the Sundaic region that remained forest covered: west of Sumatra, north‐west of Borneo, the Malacca Straits and around Palawan. Other areas may have been covered by more open vegetation types like tree savanna, or open deciduous forest: on and to the east of the Malay/Thai Peninsula, the Java Sea area, including the Sunda Strait, and eastern Borneo. 相似文献
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The equilibrium constant of the reaction of 5,5'-dithiobis(2-nitrobenzoate) with the CysF9[93]beta sulfhydryl group of hemoglobin decreases by 2 to 3 orders of magnitude between pH 5.6 and 9. The reaction is coupled to the ionizations of two groups on the protein. At 25 degrees C one group has a pK(a) of 5.31+/-0.2 when hemoglobin is in its (tertiary) r conformation, typified by the thiolate anion form of CysF9[93]beta; this changes to 7.73+/-0.4 in the (tertiary) t conformation, typified by the mixed disulfide form of the sulfhydryl. The second group ionizes with a pK(a) of 7.11+/-0.4 in the r conformation; this changes to 8.38+/-0.2 in the t conformation. K(rt), the equilibrium constant for the r<-->t isomerization process, is 0.22+/-0.06. The standard enthalpy and entropy changes for the isomerization are DeltaH(o)(rt)=24.2 kJ mol(-1) and DeltaS(o)(rt)=68.8 JK(-1)mol(-1), respectively. 相似文献
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Abstract. Pollen analysis of a core taken from a reed marsh in northeastern Tasmania near Bass Strait highlights the interplay between climatic changes, sea level rises and the effects of Aborigines during the Holocene. Prior to 10,000 bp the region formed part of the Bassian landbridge which connected Tasmania to the Australian mainland. Vegetation at that time was characterized by shrubby grasslands with a very sparse tree cover. After 9000 bp, Eucalyptus forests prospered until about 6000 bp. A combination of salt spray from a stabilizing mid-Holocene coast, the progressive effects of soil podsolization and burning by Aborigines, eventually favoured the replacement of grassy Eucalyptus forests by Allocasuarina with an increasingly heathy understorey. The treeless heaths dominated by dwarfed Allocasuarina which presently dominate the area are regarded as part of a degradation sequence in which the above factors are implicated. 相似文献
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Elis Torrezan‐Nitao Raianna Boni Luis Fernando Marques‐Santos 《Cell biology international》2016,40(10):1071-1083
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Evolutionary transitions to marine habitats occurred frequently among Mesozoic reptiles. Only one such clade survives to the present: sea turtles (Chelonioidea). Other marine turtles originated during the Mesozoic, but uncertain affinities of key fossils have obscured the number of transitions to marine life, and the timing of the origin of marine adaptation in chelonioids. Phylogenetic studies support either a highly‐inclusive chelonioid total‐group including fossil marine clades from the Jurassic and Cretaceous (e.g. protostegids, thalassochelydians, sandownids) or a less inclusive chelonioid total‐group excluding those clades. Under this paradigm, these clades belong outside Cryptodira, and represent at least one additional evolutionary transition to marine life in turtles. We present a new phylogenetic hypothesis informed by high resolution computed tomographic data of living and fossil taxa. Besides a well‐supported Chelonioidea, which includes protostegids, we recover a previously unknown clade of stem‐group turtles, Angolachelonia, which includes the Late Jurassic thalassochelydians, and the Cretaceous–Palaeogene sandownids. Accounting for the Triassic Odontochelys, our results indicate three independent evolutionary transitions to marine life in non‐pleurodiran turtles (plus an additional two‐three in pleurodires). Among all independent origins of marine habits, a pelagic ecology only evolved once, among chelonioids. All turtle groups that independently invaded marine habitats in the Jurassic–Cretaceous (chelonioids, angolachelonians, bothremydid pleurodires) survived the Cretaceous–Palaeogene mass extinction event. This highlights extensive survival of marine turtles compared to other marine reptiles. Furthermore, deeply‐nested clades such as chelonioids are found by the middle Early Cretaceous, suggesting a rapid diversification of crown‐group turtles during the Early Cretaceous. 相似文献
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S. T. Williams L. M. Smith D. G. Herbert B. A. Marshall A. Warén S. Kiel P. Dyal K. Linse C. Vilvens Y. Kano 《Ecology and evolution》2013,3(4):887-917
Recent expeditions have revealed high levels of biodiversity in the tropical deep‐sea, yet little is known about the age or origin of this biodiversity, and large‐scale molecular studies are still few in number. In this study, we had access to the largest number of solariellid gastropods ever collected for molecular studies, including many rare and unusual taxa. We used a Bayesian chronogram of these deep‐sea gastropods (1) to test the hypothesis that deep‐water communities arose onshore, (2) to determine whether Antarctica acted as a source of diversity for deep‐water communities elsewhere and (3) to determine how factors like global climate change have affected evolution on the continental slope. We show that although fossil data suggest that solariellid gastropods likely arose in a shallow, tropical environment, interpretation of the molecular data is equivocal with respect to the origin of the group. On the other hand, the molecular data clearly show that Antarctic species sampled represent a recent invasion, rather than a relictual ancestral lineage. We also show that an abrupt period of global warming during the Palaeocene Eocene Thermal Maximum (PETM) leaves no molecular record of change in diversification rate in solariellids and that the group radiated before the PETM. Conversely, there is a substantial, although not significant increase in the rate of diversification of a major clade approximately 33.7 Mya, coinciding with a period of global cooling at the Eocene–Oligocene transition. Increased nutrients made available by contemporaneous changes to erosion, ocean circulation, tectonic events and upwelling may explain increased diversification, suggesting that food availability may have been a factor limiting exploitation of deep‐sea habitats. Tectonic events that shaped diversification in reef‐associated taxa and deep‐water squat lobsters in central Indo‐West Pacific were also probably important in the evolution of solariellids during the Oligo‐Miocene. 相似文献
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Endre Aas Birgitta Liewenborg Bj rn Einar Gr svik Lionel Camus Grete Jonsson Jan Fredrik B rseth Lennart Balk 《Biomarkers》2003,8(6):445-460
In order to understand and apply DNA adduct formation in fish liver as a biomarker for aquatic pollution, information concerning the natural background levels in non-contaminated organisms, caused by endogenous compounds, is of fundamental importance. In this study, DNA adducts were analysed in liver of 11 fish species from arctic and sub-arctic areas in the northern Atlantic using the nuclease P1 version of the 332P-postlabelling technique. The collected fish were assumed not to have been influenced by anthropogenic pollution apart from possible long-range transported pollutants. As polycyclic aromatic hydrocarbons (PAHs) are thought to be fundamental in forming the type of DNA adducts detected by the method used, biliary PAH metabolite levels were measured in a selection of the investigated species. In all investigated individuals, the levels of PAH metabolites were undetectable. Controlled on-site exposure experiments with benzo[a]pyrene (polar cod) and laboratory experiments with crude oil (polar cod and Atlantic cod) were conducted. DNA adducts were formed in both these species. The field-sampled fish showed undetectable levels of DNA adducts or levels just above the detection limit. The present study supports the assumption that when DNA adducts are detected by the nuclease P1 version of the 3ng method in fish liver, it can be interpreted as DNA damage caused by pollutants. 相似文献
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Endre Aas Birgitta Liewenborg Bjørn Einar Grøsvik Lionel Camus Grete Jonsson Jan Fredrik Børseth 《Biomarkers》2013,18(6):445-460
In order to understand and apply DNA adduct formation in fish liver as a biomarker for aquatic pollution, information concerning the natural background levels in non-contaminated organisms, caused by endogenous compounds, is of fundamental importance. In this study, DNA adducts were analysed in liver of 11 fish species from arctic and sub-arctic areas in the northern Atlantic using the nuclease P1 version of the 32P-postlabelling technique. The collected fish were assumed not to have been influenced by anthropogenic pollution apart from possible long-range transported pollutants. As polycyclic aromatic hydrocarbons (PAHs) are thought to be fundamental in forming the type of DNA adducts detected by the method used, biliary PAH metabolite levels were measured in a selection of the investigated species. In all investigated individuals, the levels of PAH metabolites were undetectable. Controlled on-site exposure experiments with benzo[a]pyrene (polar cod) and laboratory experiments with crude oil (polar cod and Atlantic cod) were conducted. DNA adducts were formed in both these species. The field-sampled fish showed undetectable levels of DNA adducts or levels just above the detection limit. The present study supports the assumption that when DNA adducts are detected by the nuclease P1 version of the 32P-postlabelling method in fish liver, it can be interpreted as DNA damage caused by pollutants. 相似文献