Occurrence and distribution of bacterial indicators and pathogens in canal communities along the Texas coast.

Increased construction of residential canal communities along the southern coastline of the United States has led to a concern about their impact on water quality. Pollution of such dead-end canals is potentially hazardous because of their heavy usage for recreational activities. Coliforms, fecal coliforms, and salmonellae in the surface water and bottom sediments of six selected residential coastal canals were monitored over a period of 17 months. No statistically significant relationship was observed between the organism concentrations and temperature, pH, turbidity, and suspended solids content of water. An inverse relationship between the concentration of indicator organism and salinity of water was found, however, to occur at a 99.9% level of significance. All of the microorganisms studied were found to be present in greater numbers in sediments than in the overlying water, often by a factor of several logs. Heavy rainfall resulted in large increases in the number of organisms in both water and sediment samples. Our results indicate that bottom sediments in the shallow canal systems can act as reservoirs of enteric bacteria, which may be resuspended in response to various environmental factors and recreational activities.     

Monitoring of waterborne pathogens in surface waters in amsterdam, the Netherlands, and the potential health risk associated with exposure to cryptosporidium and giardia in these waters

The water in the canals and some recreational lakes in Amsterdam is microbiologically contaminated through the discharge of raw sewage from houseboats, sewage effluent, and dog and bird feces. Exposure to these waters may have negative health effects. During two successive 1-year study periods, the water quality in two canals (2003 to 2004) and five recreational lakes (2004 to 2005) in Amsterdam was tested with regard to the presence of fecal indicators and waterborne pathogens. According to Bathing Water Directive 2006/7/EC, based on Escherichia coli and intestinal enterococcus counts, water quality in the canals was poor but was classified as excellent in the recreational lakes. Campylobacter, Salmonella, Cryptosporidium, and Giardia were detected in the canals, as was rotavirus, norovirus, and enterovirus RNA. Low numbers of Cryptosporidium oocysts and Giardia cysts were detected in the recreational lakes, despite compliance with European bathing water legislation. The estimated risk of infection with Cryptosporidium and Giardia per exposure event ranged from 0.0002 to 0.007% and 0.04 to 0.2%, respectively, for occupational divers professionally exposed to canal water. The estimated risk of infection at exposure to incidental peak concentrations of Cryptosporidium and Giardia may be up to 0.01% and 1%, respectively, for people who accidentally swallow larger volumes of the canal water than the divers. Low levels of viable waterborne pathogens, such as Cryptosporidium and Giardia, pose a possible health risk from occupational, accidental, and recreational exposure to surface waters in Amsterdam.     

Use of microcosms to determine persistence of Escherichia coli in recreational coastal water and sediment and validation with in situ measurements

AIMS: To determine the persistence of the faecal indicator organism Escherichia coli in recreational coastal water and sediment using laboratory-based microcosms and validation with in situ measurements. METHODS AND RESULTS: Intact sediment cores were taken from three distinct coastal sites. Overlying estuarine water was inoculated with known concentrations of E. coli and decay rates from both overlying water and sediment were determined following enumeration by the membrane filtration method at fixed time intervals over a 28-day period. It was demonstrated that E. coli may persist in coastal sediment for >28 days when incubated at 10 degrees C. Escherichia coli survival was found to have an inverse relationship with temperature in both water and sediment. In general the decay rate for E. coli was greater in water than in sediment. Small particle size and high organic carbon content were found to enhance E. coli survival in coastal sediments in the microcosms. CONCLUSIONS: Results of this microcosm study demonstrated the more prolonged survival of E. coli in coastal sediments compared with overlying water, which may imply an increased risk of exposure because of the possible resuspension of pathogenic micro-organisms during natural turbulence or human recreational activity. SIGNIFICANCE AND IMPACT OF THE STUDY: A more accurate estimate of exposure risk has been described which may subsequently be used in a quantitative microbial risk assessment for recreational coastal waters.     

Impact of hydrodynamics (ex- and infiltration) on the microbially controlled phosphorus mobility in running water sediments of a cultivated northeast German wetland

To gain insight into the impact of hydrodynamics (ex- and infiltration) on microbial activities, the microbial community structure, and the dynamics of phosphate and other chemical parameters in running water sediments of two transects in a German wetland have been studied. Flow directions and Darcy flow rates at canal bottom were determined using temperature profiles in the groundwater zone near and beneath the canal. Besides the chemical composition of pore water and sediment, a suite of enzyme activities and phosphorus fractions have been analyzed in the sediment. Hydrological analysis proved that at one transect infiltrating and stagnant conditions alter frequently, whereas at the other transect exfiltration dominates. We found significant differences between the transects in microbial activities and organic and iron-bound phosphorus as well as significant correlations between Darcy flux, microbial activities and phosphorus fractions. We conclude that not only the direction and rates of the flow, but also the quantity of changes between ex- and infiltration have an impact on microbial activity, and thus on phosphorus dynamics in the sediment of wetlands.     

Spatiotemporal Transmission and Determinants of Typhoid and Paratyphoid Fever in Hongta District,Yunnan Province,China

Background

Typhoid and paratyphoid fever are endemic in Hongta District and their prevalence, at 113 per 100,000 individuals, remains the highest in China. However, the exact sources of the disease and its main epidemiological characteristics have not yet been clearly identified.

Methods and Findings

Numbers of typhoid and paratyphoid cases per day during the period 2006 to 2010 were obtained from the Chinese Center of Disease Control (CDC). A number of suspected disease determinants (or their proxies), were considered for use in spatiotemporal analysis: these included locations of discharge canals and food markets, as well as socio-economic and environmental factors. Results showed that disease prevalence was spatially clustered with clusters decreasing with increasing distance from markets and discharge canals. More than half of the spatial variance could be explained by a combination of economic conditions and availability of health facilities. Temporal prevalence fluctuations were positively associated with the monthly precipitation series. Polluted hospital and residential wastewater was being discharged into rainwater canals. Salmonella bacteria were found in canal water, on farmland and on vegetables sold in markets.

Conclusion

Disease transmission in Hongta district is driven principally by two spatiotemporally coupled cycles: one involving seasonal variations and the other the distribution of polluted farmland (where vegetables are grown and sold in markets). Disease transmission was exacerbated by the fact that rainwater canals were being used for disposal of polluted waste from hospitals and residential areas. Social factors and their interactions also played a significant role in disease transmission.     

Recreational water quality analyses of the Colorado River corridor in Grand Canyon.

We intensively examined the recreational water quality of the Colorado River and 26 tributaries in Grand Canyon National Park over four consecutive summers. Highly ephemeral precipitation cycles and arid watershed hydrologies were the principal factors influencing water quality. Fecal coliforms (FC) in the river and in most tributaries were less than or equal to 10 FC 100 ml-1 and less than or equal to 20 FC 100 ml-1, respectively, during drought cycles. During rainfall cycles, FC densities were highly variable and often exceeded recreational contact standards. FC were not found to vary significantly in response to diurnal fluctuations in river stage height which resulted from hydroelectric stream flow regulation. River and tributary bottom sediments harbored FC in densities averaging 10 to 100 times those in the overlying waters. Sediment FC densities were not found to be reliable indicators of overlying water quality when storm flow and nonstorm flow periods were compared.     

Anaerobic methanotrophy is stimulated by graphene oxide in a brackish urban canal sediment

Anthropogenic activities are influencing aquatic environments through increased chemical pollution and thus are greatly affecting the biogeochemical cycling of elements. This has increased greenhouse gas emissions, particularly methane, from lakes, wetlands, and canals. Most of the methane produced in anoxic sediments is converted into carbon dioxide by methanotrophs before it reaches the atmosphere. Anaerobic oxidation of methane requires an electron acceptor such as sulphate, nitrate, or metal oxides. Here, we explore the anaerobic methanotrophy in sediments of three urban canals in Amsterdam, covering a gradient from freshwater to brackish conditions. Biogeochemical analysis showed the presence of a shallow sulphate–methane transition zone in sediments of the most brackish canal, suggesting that sulphate could be a relevant electron acceptor for anaerobic methanotrophy in this setting. However, sediment incubations amended with sulphate or iron oxides (ferrihydrite) did not lead to detectable rates of methanotrophy. Despite the presence of known nitrate-dependent anaerobic methanotrophs (Methanoperedenaceae), no nitrate-driven methanotrophy was observed in any of the investigated sediments either. Interestingly, graphene oxide stimulated anaerobic methanotrophy in incubations of brackish canal sediment, possibly catalysed by anaerobic methanotrophs of the ANME-2a/b clade. We propose that natural organic matter serving as electron acceptor drives anaerobic methanotrophy in brackish sediments.     

Radial perforations in crinoid stems from the Silurian of Gotland

Radiating intracolumnal canals are a characteristic feature of large (diameter 10 mm or more) crinoid stems from the Silurian of Gotland. They are found in nodals as well as in internodals where the columnal height exceeds one millimetre. They were formed secondarily in the median and distal portions of crinoid stems with pseudocirriferous holdfasts. Intercolumnal canals are found in the distal parts of stems with true cirri regardless of the size of the stem. It is suggested that these canals played an important role in crinoid physiology. The crinoids are believed to have sustained a large proportion of their tissues through cutaneous digestion and uptake of dissolved substances from the surrounding sea water. The intra- and intercolumnal canals increased the surface of the axial canal in relation to volume. They provided a connection between the axial canal and the surrounding sea water, thus facilitating nutrient transport to the tissues.     

Distribution and survival of faecal indicator bacteria in the sediments of the Bay of Vidy,Lake Geneva,Switzerland

The purpose of this study was to determine the concentrations and the horizontal distribution of faecal indicator bacteria (FIB) including Escherichia coli and Enterococcus sp. in the bottom sediments of the Bay of Vidy, City of Lausanne, Switzerland. A vertical distribution of FIB in sediments near the municipal wastewater treatment plant (WWTP) outlet was evaluated and their persistence in those sediments was monitored for a period of 90 days. High FIB levels were measured in the sediments sampled near the WWTP outlet pipe and the mouth of the Chamberonne River, at concentrations ranging between 10⁵ and 10⁷ CFU 100 g^?1. FIB levels at 10 cm depth in the sediments near the WWTP outlet pipe ranged between 10⁴ and 10⁵ CFU 100 g^?1, and were still detected in the top 6 cm after 90 days. Results of this study indicate that freshwater sediments of the Bay of Vidy constitute a reservoir of faecal indicator bacteria, which can persist in certain areas of the bay. Possible resuspension of FIB and pathogens may affect water quality and may increase health risks to sensitive populations during recreational activities. FIB survival in sediments for long periods is of considerable significance for the understanding of microbial pollution in water and for the management of risk at specific recreational coastal sites.     

喜树的分泌结构及其与喜树碱积累的关系

为了揭示喜树碱(camptothecin,CPT)在喜树(Camptotheca acuminata Decne.)中的积累部位及积累规律,运用组织化学技术和高效液相色谱技术对喜树茎、叶中喜树碱的积累部位和含量进行了相关性分析.结果发现两类分泌结构与喜树碱积累密切相关:一类是分布于幼茎和幼叶表面的单细胞腺毛;另一类是分布于喜树幼茎和幼叶中的由1～2层细胞包围而成的分泌道.由此推断,喜树中的分泌结构为喜树碱的主要积累部位.     

喜树的分泌结构及其与喜树碱积累的关系(英文)

为了揭示喜树碱(camptothecin,CPT)在喜树(Camptotheca acuminata Decne.)中的积累部位及积累规律,运用组织化学技术和高效液相色谱技术对喜树茎、叶中喜树碱的积累部位和含量进行了相关性分析。结果发现两类分泌结构与喜树碱积累密切相关:一类是分布于幼茎和幼叶表面的单细胞腺毛;另一类是分布于喜树幼茎和幼叶中的由1～2层细胞包围而成的分泌道。由此推断,喜树中的分泌结构为喜树碱的主要积累部位。     

Relationships Between Environmental Factors, Bacterial Indicators, and the Occurrence of Enteric Viruses in Estuarine Sediments

Current standards for evaluation of the public health safety of recreational and shellfish-harvesting waters are based upon bacteriological analysis, but do not include an evaluation of the number of viruses. The objective of this study was to determine the occurrence of enteric viruses in estuarine sediments and to find a relationship, if any, between the presence of viruses in seawater or sediment or both and various biological and physicochemical characteristics of the environment. Viruses were found in greater numbers in sediment than in overlying seawater on a volume basis. Several types of enteroviruses were isolated: coxsackievirus types A16, B1, and B5, echovirus type 1, and poliovirus type 2. On several occasions, viruses were isolated from sediments when overlying seawaters met bacteriological water quality standards for recreational use. Statistical analysis of the relationship between viruses in seawater or in sediment and other variables measured yielded only one significant association: the number of viruses in sediment was found to be positively correlated with the number of fecal coliforms in sediment. No other physical, chemical, or biological characteristic of seawater or sediment that was measured showed statistically significant association with viral numbers. No correlation was found between bacterial indicators and virus in the overlying waters. The data indicated that evaluation of the presence of bacteria and viruses in sediment may provide additional insight into long-term water quality conditions and that indicator bacteria in water are not reflective of the concentration of enteric viruses in marine waters.     

Structural and Functional Investigation of White Sea Water and Bottom Sediments

Statistical analysis of dynamic indices of biopolymers enzymatic destruction in unstratified and stratified White Sea water has revealed specific properties of protease and amylase activities. We analyzed the component composition and hydrolytic enzymatic activities in the surface layer of the bottom sediments (0–2 cm). The relationship between protease and amylase enzymatic activities in the surface sediments with different content of pelite fraction is discussed.     

Relationships between environmental factors, bacterial indicators, and the occurrence of enteric viruses in estuarine sediments

Current standards for evaluation of the public health safety of recreational and shellfish-harvesting waters are based upon bacteriological analysis, but do not include an evaluation of the number of viruses. The objective of this study was to determine the occurrence of enteric viruses in estuarine sediments and to find a relationship, if any, between the presence of viruses in seawater or sediment or both and various biological and physicochemical characteristics of the environment. Viruses were found in greater numbers in sediment than in overlying seawater on a volume basis. Several types of enteroviruses were isolated: coxsackievirus types A16, B1, and B5, echovirus type 1, and poliovirus type 2. On several occasions, viruses were isolated from sediments when overlying seawaters met bacteriological water quality standards for recreational use. Statistical analysis of the relationship between viruses in seawater or in sediment and other variables measured yielded only one significant association: the number of viruses in sediment was found to be positively correlated with the number of fecal coliforms in sediment. No other physical, chemical, or biological characteristic of seawater or sediment that was measured showed statistically significant association with viral numbers. No correlation was found between bacterial indicators and virus in the overlying waters. The data indicated that evaluation of the presence of bacteria and viruses in sediment may provide additional insight into long-term water quality conditions and that indicator bacteria in water are not reflective of the concentration of enteric viruses in marine waters.     

Microbiota of the Kinderlinskaya cave (South Urals,Russia)

The mesophilic and psychrotolerant microbiota of the air, soil, water, and bottom sediments of the Kinderlinskaya cave (South Urals, Russia) and the factors affecting the structure of microbial communities were investigated. The pattern of microbial distribution in soils was shown to depend on both the configuration of the cave and the level of recreational load. The lowest numbers of bacteria and micromycetes were found in the poorly visited, difficult-to-access sites. Coliform bacteria were revealed in all soil and sediment samples and in some water samples. Micromycetes belonged to 19 genera, with Geomyces pannorum as the dominant species. Air movement was shown to be the main factor affecting the density of the aerial microbiota.     

Morphology of the Mechanosensory Lateral Line System in Elasmobranch Fishes: Ecological and Behavioral Considerations

The relationship between morphology of the mechanosensory lateral line system and behavior is essentially unknown in elasmobranch fishes. Gross anatomy and spatial distribution of different peripheral lateral line components were examined in several batoids (Raja eglanteria, Narcine brasiliensis, Gymnura micrura, and Dasyatis sabina) and a bonnethead shark, Sphyrna tiburo, and are interpreted to infer possible behavioral functions for superficial neuromasts, canals, and vesicles of Savi in these species. Narcine brasiliensis has canals on the dorsal surface with 1 pore per tubule branch, lacks a ventral canal system, and has 8–10 vesicles of Savi in bilateral rows on the dorsal rostrum and numerous vesicles ( = 65 ± 6 SD per side) on the ventral rostrum. Raja eglanteria has superficial neuromasts in bilateral rows along the dorsal body midline and tail, a pair anterior to each endolymphatic pore, and a row of 5–6 between the infraorbital canal and eye. Raja eglanteria also has dorsal canals with 1 pore per tubule branch, pored and non-pored canals on the ventral surface, and lacks a ventral subpleural loop. Gymnura micrura has a pored dorsal canal system with extensive branch patterns, a pored ventral hyomandibular canal, and non-pored canal sections around the mouth. Dasyatis sabina has more canal pores on the dorsal body surface, but more canal neuromasts and greater diameter canals on the ventral surface. Sphyrna tiburo has primarily pored canals on both the dorsal and ventral surfaces of the head, as well as the posterior lateral line canal along the lateral body surface. Based upon these morphological data, pored canals on the dorsal body and tail of elasmobranchs are best positioned to detect water movements across the body surface generated by currents, predators, conspecifics, or distortions in the animal's flow field while swimming. In addition, pored canals on the ventral surface likely also detect water movements generated by prey. Superficial neuromasts are protected from stimulation caused by forward swimming motion by their position at the base of papillar grooves, and may detect water flow produced by currents, prey, predators, or conspecifics. Ventral non-pored canals and vesicles of Savi, which are found in benthic batoids, likely function as tactile or vibration receptors that encode displacements of the skin surface caused by prey, the substrate, or conspecifics. This mechanotactile mechanism is supported by the presence of compliant canal walls, neuromasts that are enclosed in wide diameter canals, and the presence of hair cells in neuromasts that are polarized both parallel to and nearly perpendicular to the canal axis in D. sabina. The mechanotactile, schooling, and mechanosensory parallel processing hypotheses are proposed as future directions to address the relationships between morphology and physiology of the mechanosensory lateral line system and behavior in elasmobranch fishes.     

喜树幼枝的喜树碱积累及其组织内定位

对喜树幼枝发育过程中各组织结构变化的观察和喜树碱含量的分析,以及荧光显微技术对喜树碱的定位研究,结果表明,幼茎和幼叶表面的单细胞腺毛和幼茎及幼叶内部由1～2层细胞包围而成的分泌道是喜树碱的主要积累部位.     

Secretory Structures and Their Relationship to Accumulation of Camptothecin in Camptotheca acuminata （Nyssaceae）

Camptotheca acuminata Decne. (Nyssaceae) is a major source of the anticancer camptothecin (CPT). It is important to understand how CPT accumulates in C.acuminata in order to improve CPT production strategies. The aim of this study was to anatomically and morphologically characterize the secretory structure in leaves and stems of C.acuminata and determine their relationship to accumulation of OPT. Secretory canals and glandular trichomes were found in young stems and young leaves. Secretory canals consisted of a sub-epidermal canal delimited by one to two layers of cells. Glandular trichomes were unicellular. Fluorescence microscopy and OPT analysis showed that OPT was primarily accumulated in secretory canals and glandular trichomes of leaves and stems.     

Artificial waterway design affects fish assemblages in urban estuaries

Fishes were collected from residential canal estates leading directly off natural estuaries and artificial lakes with control tidal exchange in south-east Queensland, Australia, to test the model that the difference in artificial waterway design affects fish assemblages. A total of 17 779 fish representing 52 species was caught, including 23 species of economic importance (45% of the catch). Total fish abundance and species richness differed little among sites within or between the two artificial habitats (canals and lakes) in either of the seasons sampled (winter and spring). Multivariate analysis showed, however, that assemblages differed among sites within the same artificial habitat. The differences were best explained by the distance sites were from open water, while salinity, water temperature and dissolved oxygen explained little of the variability. Most species were found in canals and lakes, but there were enough differences in composition between the habitats to detect a difference in both seasons (significant ANOSIM tests). Salinity was lower in lakes because of the tidal restrictions, and while this was only weakly correlated with differences in fish assemblages, it had the most explanatory power of any environmental variable. New recruits arrived later in lakes than canals, perhaps because of the barriers to tidal flow. A survey the following year showed that differences among individual lakes were consistent through time, offering insights into the influence of different tidal barriers on fish assemblages. The design change from canals to lakes has a minor influence on fish assemblages and alters the timing of recruitment.     

Enumeration of faecal coliforms from recreational coastal sites: evaluation of techniques for the separation of bacteria from sediments

AIMS: To identify the most efficient techniques for the separation of micro-organisms from coastal sediments and, using these techniques, to determine the concentration of faecal indicator organisms in recreational coastal water and sediment. METHODS AND RESULTS: Sediment samples were taken from a range of recreational coastal sites and subjected to various physical techniques to separate micro-organisms from sediment particles. Techniques investigated included manual shaking, treatment by sonication bath for 6 and 10 min, respectively, and by sonication probe for 15 s and 1 min, respectively. The use of the sonication bath for 10 min was the most successful method for removing micro-organisms from sediment particles where sediments consisted mainly of sand. When sediments contained considerable proportions of silt and clay, however, manual shaking was most successful. Faecal coliforms were then enumerated by membrane filtration in both water and sediment from three recreational coastal sites, chosen to represent different physical sediment characteristics, over a 12-month period. Faecal coliform concentrations were generally greater in sediment compared with overlying water for all samples. This was most evident in sediment consisting of greater silt/clay and organic carbon content. CONCLUSIONS: This study demonstrated the importance of sediment characteristics in determining the most efficient method for the separation of micro-organisms from coastal sediments. Sediment characteristics were also found to influence the persistence of micro-organisms in coastal areas. SIGNIFICANCE AND IMPACT OF THE STUDY: Recreational coastal sediments can act as a reservoir for faecal coliforms; therefore, sampling only overlying water may greatly underestimate the risk of exposure to potentially pathogenic micro-organisms in recreational waters.