深海微生物的研究与开发

深海是全球最大的独立生态系统,其中蕴涵着丰富并且独特的微生物资源有待我们开发。对深海微生物及其所处生态系统的研究将提升我们对地球早期环境及其变化过程的认识,为研究生命起源,甚至探索域外生命或其他潜在生命形式提供新的线索。对深海微生物研究开发的历史和进展进行了概述,并对这一研究领域的前沿及影响进行了讨论。     

The microbiology of mutability

Bacteria possessing elevated spontaneous mutation rates are prevalent in certain environments, which is a paradox because most mutations are deleterious. For example, cells with defects in the methyl-directed mismatch repair (MMR) system, termed mutators or hypermutators, are overrepresented in populations of bacterial pathogens, with the mutator trait hypothesized to be advantageous in the changing host enviroments faced during colonization and establishment of chronic infections. Error-prone DNA polymerases, such as polIV and polV, function in translesion DNA synthesis, a DNA damage response that ensures genome integrity with a cost of increased mutation. While the biochemical aspects of these mutability pathways are well understood, the biological impacts have received less attention. Here, an examination of bacterial mutability systems and specifically the ecological and evolutionary context resulting in the selection of these systems is carried out.     

The microbiology of asthma

Asthma remains an important human disease that is responsible for substantial worldwide morbidity and mortality. The causes of asthma are multifactorial and include a complex mix of environmental, immunological and host genetic factors. In addition, epidemiological studies show strong associations between asthma and infection with respiratory pathogens, including common respiratory viruses such as rhinoviruses, human respiratory syncytial virus, adenoviruses, coronaviruses and influenza viruses, as well as bacteria (including atypical bacteria) and fungi. In this Review, we describe the many roles of microorganisms in the risk of developing asthma and in the pathogenesis of and protection against the disease, and we discuss the mechanisms by which infections affect the severity and prevalence of asthma.     

Global trends in research resources and scientific output in microbiology in Spain (1998-2007)

This work assesses the main features of microbiological research developed in Spain over the last decade (1998-2007), observing its changes and trends along the time and comparing them to those which have taken place in other life sciences. This analysis encompasses the entire scientific cycle: the organizations involved (basically, universities, research centers, scientific societies, and companies), resources invested (human and economic), and outputs or results obtained (journals, articles, doctoral theses, and other documents or publications). Summarizing, there is a positive trend in Spanish microbiology regarding research projects and scientific articles; the scientific output (research articles) of Spanish microbiologists ranks 6th in the world, which is higher than the ranking of Spain with respect to economic development.     

The microbiology of cut-away peat

Summary Fungi occurring commonly in cut-away peat were selected for autecological study, being chosen to represent both cosmopolitan and indigenous elements of the peat flora. A fungus alien to peat,Fusarium culmorum, was also included in the study. The germination in peat of the spores of these species and their ability to grow and colonise organic material added to peat were examined. It was concluded that the cosmopolitan element was composed of efficient saprophytes but that the ability of their spores to germinate in unamended peat was limited. Although Fusarium spores germinated, the germ tubes subsequently formed chlamydospores. Only spores of the indigenous peat fungi germinated well in peat but their growth habit was not suited to the colonisation and utilisation of organic matter, added to peat, in competition with the cosmopolitan flora. The concept of ‘source potential’ is introduced to explain the variance in fungal growth from different substrate bases.     

The renaissance of microbiology.

Microbiology is finally occupying its true position as the pre-eminent field in life sciences. This is due to advances in molecular techniques that confirm the evolutionary significance of the biology of microbes. It is anticipated that the use of comparative genomics will provide information that will advance the understanding of mechanisms of pathogenesis and the importance of secondary metabolism in social microbiology. More emphasis on studies of microbial diversity will increase its value in both fundamental microbiology and its industrial applications.     

The microbiology of metalworking fluids

Metalworking fluids (MWFs) are complex mixtures of chemicals and are indispensable materials in industry. They are used as cooling and lubricating agents in different machining process such as grinding, milling, and cutting. The quality of MWFs is affected by physical, chemical, and microbial contaminates. In particular, MWFs are highly vulnerable to microbial contamination, which may act both as potential pathogens and deteriorgens. Microbial contamination is of major concern due to potential health hazards such as skin dermatitis and hypersensitivity pneumonitis. The contaminated MWFs can exhibit high degrees of microbial loading, ranging from 10(4) to 10(10) colony-forming units (CFU)/ml. Wide varieties of microorganisms are reported to colonize MWFs. Traditional culturing techniques are not only laborious and time consuming but also underestimate the actual distribution of the microorganisms present in the contaminated MWFs. Therefore, rapid molecular methods such as real-time PCR and fluorescent in situ hybridization are implemented to monitor the microbial load. In industry, biocides are presently used to control microbial contamination. However, it has its own disadvantages and therefore, in recent years, alternative methods such as UV irradiation were evaluated to reduce microbial contamination in MWFs. Microbes inhabiting the MWF are also capable of forming biofilm which is detrimental to the MWF system. Biofilm is resistant to common disinfectant methods, and thus further research and development is required to effectively control its formation within MWF systems. This review is intended to discuss the overall microbiological aspects of MWF.