River flow influence on the fish community of the Tagus estuary (Portugal)

The influence of river flow on the fish community was assessed for the Tagus estuary (Portugal), based on sampling surveys carried out between 1979 and 2002. Four estuarine areas were sampled using similar fishing gear and effort in all the years considered in this study (1978–1980; 1995–1997; and 2001–2002). According to river freshwater flow values, sampling years were classified as wet (mean value of 714 m³ s⁻¹, sd = 110 m³ s⁻¹) or dry (mean value of 164 m³ s⁻¹, sd = 19m³ s⁻¹). Species richness varied between 22 and 39 according to the year, but no significant differences were related to river flow. The number of species per ecological guild was also similar in wet and dry years. Fish assemblage was dominated by marine occasional, estuarine resident and marine-estuarine opportunist species that represented near 90% of all fish species. The highest densities were represented by estuarine resident species. Fish density in dry and wet years differed significantly (mean density of 10.51 individuals 1,000 m⁻² and 3.62 individuals 1,000 m⁻², respectively), and the major differences were registered for estuarine resident, marine-estuarine opportunist and catadromous species. These differences probably reflected the estuarine habitat availability and also differences in fish densities in some estuarine areas under different flow conditions. The multivariate ordination analyses performed outlined both seasonal and spatial variation trends in fish distribution and abundance. The estuarine longitudinal gradient and its relationship with species distribution were less evident in dry years. Relationships between species abundance and river flow were different according to species, which is probably due to different needs in the timing and magnitude of river flow. Electronic supplementary material  The online version of this article (doi: ) contains supplementary material, which is available to authorized users.     

Species zonation in Corroios salt marsh in the Tagus estuary (Portugal) and its dynamics in the past fifty years

The objective of this study was to understand the main factors controlling salt marsh plant species structure and dynamics. So, we determined plant cover and composition across a permanent transect, 450 m long and 1 m wide, defined in 1951 in Corroios salt marsh, in the Tagus estuary (Portugal) and we characterized the physicochemical variables every 50 m along this transect. Based on those results we discuss the dynamic and evolution of salt marsh vegetation during the last 50 years comparing former and recent data. The results showed that differences in salinity and flooding were determinant factors in plant species composition and distribution along the studied transect. In addition, long-term variations of these factors as a consequence of vertical accretion and sea level rise seem to be responsible for the evolution in plant structure and vegetation zonation patterns, during the last 50 years in the Tagus estuary salt marshes.     

Interactions of light, temperature and inorganic nitrogen in controlling planktonic nitrogen utilisation in the Tagus estuary

The effect of light, temperature and ammonium on inorganic nitrogen uptake by phytoplankton was investigated from June 1994 through December 1995 at three sites in the Tagus estuary (Portugal), during high tide of neap tides. Ammonium concentrations higher than 10 M reduced nitrate uptake down to 24% but never prevented it. Below this threshold concentration, nitrate uptake was neither inhibited nor changed. Uptake of both nitrate and ammonium as a function of light intensity exhibited a saturation response. Uptake reduction occurred in the near bottom phytoplankton populations, particularly for nitrate. The ammonium uptake system was less limited by light than the nitrate uptake system, indicating the importance of ammonium as a nitrogen source for the phytoplankton which is likely to experience high changes in light in the well-mixed water column of this estuarine environment. Ammonium uptake was exponentially related to temperature in the upper estuary whereas in the mid and lower estuary this relationship was linear. The effect of temperature on nitrate uptake was linear but far less marked than for ammonium uptake.     

Trophic structure of macrobenthos in the Tagus estuary and adjacent coastal shelf

The trophic structure of benthic communities in the Tagus estuary and adjacent coastal shelf was characterized according to a functional guild approach, based on sampling surveys conducted between 1987 and 2000. Macrobenthic organisms were assigned to seven distinct trophic groups (herbivorous, filter feeders, surface deposit feeders, subsurface deposit feeders, carnivores, filter feeders/detritivores, carnivores/detritivores) and the dominance of these groups was related to environmental variables using multivariate ordination techniques. Surface-deposit feeders were numerically dominant in the Tagus estuary, making up 52% of the benthic communities, while in the adjacent coastal shelf the assemblage was dominated by both surface-deposit feeders and filter feeders (37% and 33%, respectively). When biomass was considered, filter feeders and filter feeders/detritivores were the dominant groups in the estuary, while for the adjacent coastal shelf filter feeders represented 83% of the total biomass. Salinity, depth and sediment composition were the main factors structuring spatial distribution. Surface-deposit feeders were the most abundant macrobenthos of the upper estuary. Surface deposit feeders also dominated the middle and the lower estuary but the proportion of filter feeders as well as other trophic groups increased with salinity. Generally, a more even distribution of trophic structure was found at stations with high salinity. In the adjacent coastal shelf, the trophic diversity decreased with depth. The trophic structure revealed that filter feeders dominated in abundance and biomass in shallow sandy sediments (<25 m), while in deeper sandy mud and muddy habitats (>50 m to 260 m), deposit feeders and carnivores were the most important groups in abundance and biomass, respectively.     

Short-term sedimentation in Tagus estuary,Portugal: the influence of salt marsh plants

Short-term sediment deposition was studied at four salt marsh areas in the Tagus estuary. In areas covered with Sarcocornia perennis, Sarcocornia fruticosa, Halimione portulacoides and Spartina maritima and also in the non-vegetated areas, sedimentation was measured as the monthly accumulation of sediments on nylon filters anchored on the soil surface, from August 2000 to May 2001. Our experiments were used also to determine the influence of the different plant species in vertical accretion rates. Short-term sedimentation rates (from 2.8 to 272.3 g m⁻² d⁻¹) did show significant differences when the four salt marshes studied in the Tagus estuary were compared to each others. Salt marshes closer to the sediment sources had higher sedimentation rates. Our results suggest that the salt marsh type and surface cover may provide small-scale variations in sedimentation and also that sediment deposition values do change according to the position of the different plant species within the salt marsh. Sedimentation is an essential factor in salt marsh vertical accretion studies and our investigation may provide support to help forecast the adaptative response of the Tagus estuary wetlands to future sea level rise.     

Nitrogen sequestration capacity of two salt marshes from the Tagus estuary

The role of salt marshes as nitrogen sink is examined taking into consideration the seasonal variation of above and belowground biomass of Spartina martima and Halimione portulacoides in two marshes from Tagus estuary, Pancas and Corroios, and the degradation rates of belowground litter. Total nitrogen was determined in plant components, decomposing litter and sediment. Biomass was higher in Corroios, the saltier marsh, with 7190 g m⁻² y⁻¹ dw of S. maritima and 6593 g m⁻² y⁻¹ dw of H. portulacoides and the belowground component contributed to 96% and 90% of total biomass, respectively. In the other marsh, Pancas, belowground biomass contributed to 56% and 76% of total biomass for S. maritima and H. portulacoides, respectively. Litterbag experiment showed that between 25% and 50% of nitrogen is lost within the first month and remained relatively constant in the next four months. Slower decomposition is observed in sediments with higher nitrogen concentration (max. 0.7% N in the saltier marsh). Higher concentrations of N were found in the sediment upper layers. Considering the sediment-root system, most of the nitrogen is stored in the sediment compartment and only about 1–4% of the total N was found in the roots. Considering these results, Tagus salt marshes act as a sink for nitrogen.     

Occurrence of vertebral deformities in Gobiidae (Pisces) from the Tagus estuary

In four species of gobiid fish caught in Tagus estuary during 1996, the incidence of skeletal deformities ranged from 2 to 5%. Differences between sampling stations or between the two most abundant species Pomatoschistus minutus and Gobius niger were statistically not significant (p > 0.05). The type of deformity depended upon species. P. minutus and P. microps showed bone nodules at the inferior side of the abdominal vertebrae, whilst G. niger and G. paganellus had shortened caudal vertebrae (achondroplasia) and deformed ural plates. The possible role of pollution or other conditions in the Tagus estuary is discussed.     

Comparative feeding ecology of sympatric Solea solea and S. senegalensis, within the nursery areas of the Tagus estuary, Portugal

Among the stomach contents of 609 individuals of Solea solea and 1104 of S. senegalensis the main food items of S. solea were Corophium spp. and Hediste diversicolor, and of S. senegalensis were Corophium spp., H. diversicolor and Scrobicularia plana. For both species, the importance of larger prey items in the diet, namely H. diversicolor and Crangon crangon, increased with fish size. Feeding activity of S. solea and S. senegalensis increased in spring and summer. Short-term variations were particularly related to the tidal cycle and the two species fed in intertidal areas. Dietary dierences between the two nursery areas reflected prey availability mainly. Although intra- and interspecific length classes overlapped in diet, potential interspecific competition was probably minimized by a dierential habitat use pattern.     

On the use by birds of intertidal areas of the Tagus estuary: implications for management

The use of intertidal areas of the Tagus estuary by birds was re-analysed, based on data from 1990 to 1993, to describe (i) the temporal and spatial patterns of use of intertidal areas, (ii) the diet of birds during winter and (iii) the habitat selection patterns of feeding birds, during winter. The most common birds in the estuary were gulls, waders and ducks. Highest densities were recorded for most species in autumn and winter. The spatial distribution of birds in the intertidal areas of the estuary did not vary significantly across seasons, although broader distributions occurred when bird populations were present in high numbers. In autumn, use of intertidal areas was highly variable. Specific areas in the estuary were identified as holding important densities of birds, or having a high species richness. The most abundant species selected feeding areas according to sediment type, although the presence of channels, saltmarsh or humans also influenced the distribution of birds. The invertebrates Carcinus maenas, Hediste diversicolor and Scrobicularia plana were identified as key prey species. Plant material was important as food for ducks. Implications of these findings for the management of the estuary are discussed.     

On the food of the European eel, Anguilla anguilla (L.), in the upper zone of the Tagus estuary, Portugal

The estuarine food habits of the European eel, Anguilla anguilla (L.), in the upper zone of the Tagus estuary have been studied through the analysis of 210 specimens collected during 1988. Eels, measuring from 136 to 627 mm in total length, fed on prey organisms ranging from 2.0 to 76.0 mm in length. Amphipods and the shore crab, Carcinus maenas (L.), were the most important food items found. In more saline muddy bottom areas polychaetes, bivalves and shrimp increased their importance as prey, replacing the amphipods as preferential food. Fish were always a secondary, although significant, prey item. The occurrence of seasonal variations in eels' diet could be attributed to fluctuations in prey densities. There was evidence of a close relationship between the quantity of prey organisms in the benthos and the composition of eels' stomach contents, but a certain degree of food selection based on size, concealment capacity and motility of prey, was found.     

Age determination in Pomatoschistus mi nut us (Pallas) and Pomatoschistus microps (Kreyer) (Pisces: Gobiidae) from the upper Tagus estuary, Portugal

The use of scale inspection as a means of age-determination in Pomatoschistus microps and Pomatoschistus minutus in the Tagus estuary is confirmed, but annulus formation pattern is different from that described for P. microps in the area of the British Isles (Miller, 1975). In Britain, two annuli are laid down on the scales each year, but in the Tagus, only one annulus is formed. One possible reason for this difference is the fact that in the Tagus the peak breeding season and the lowest water temperatures coincide. Therefore, the two causes of annulus formation coexist at the same time of year.
Population structure in both species is dominated by the 0-group, which appears earlier (April/May) than reported for other areas. Maximum age seems not to exceed 26 months in P. microps and 32 months in P. minutus .     

Spatial Patterns of Benthic Macroinvertebrates in Intertidal Areas of a Southern European Estuary: The Tagus, Portugal

This study characterizes the composition and spatial distribution patterns of the benthic macrofauna in the intertidal mudflats of the Tagus estuary, western Portugal. A total of 68 species, more than 226,000 specimens with a total wet weight biomass of approximately 1170 g were identified in 380 sites. The species Streblospio shrubsolii, Cyathura carinata, Tharyx sp., Hydrobia ulvae and Tubificids were the most common and abundant. Scrobicularia plana strongly dominated the biomass. The invertebrate macrofauna of the Tagus estuary shows similarities to what is known from other temperate mudflats. The diversity of species, their overall abundance and the ratio of Molluscs plus Crustaceans to Polychaete species corroborate the distinctiveness between temperate and tropical mudflats and sandflats. The spatial distribution of the fauna reflects the sediment characteristics but the relationship between the environmental and the biological data is not as strong as obtained for sublittoral areas. This relationship diminishes from the sublittoral shelf to sublittoral estuarine areas, showing minimum values in this study, suggesting that such a relationship is less straightforward as natural disturbance increases. Nevertheless, a mixture of grain-size, elevation (inundation time) and particular habitats (relic oyster beds) form the best explanatory factors for the spatial distribution patterns of the intertidal benthic macrofauna of the Tagus estuary.     

Numerical modelling of suspended sediment transport in tidal estuaries: A comparison between the Tagus (Portugal) and the Scheldt (Belgium-the Netherlands)

A numerical model to simulate the transport of suspended sediment in tidal estuaries is presented. The model is applied to the two large European estuaries the Tagus (Portugal) and the Scheldt (Belgium-The Netherlands). Calculated suspended sediment concentrations compare favourably with observations in the Tagus (r=0.84) and in the Scheldt (r=0.73). The parametrization scheme indicates that the bottom content of fine sediment is correlated with depth in the Tagus; but a different relationship is used in the Scheldt. Because of tidal range differences, average suspended sediment concentrations are lower in the Tagus (80 mg l⁻¹) than in the Scheldt (130 mg l⁻¹), but a larger relative variation between spring and neap tide concentrations may occur in the Tagus.     

长江河口潮间带鱼类群落的时空变化

根据2006年3-11月每月在长江口4个潮间带站点的36网次鱼类采样数据,分析了该水域鱼类群落组成的时空变化特征.结果表明：本次调查采获鱼类55种,隶属20科,其中,鲤科鱼类最多,有18种,占总种数的32.7%,虾虎鱼科其次,有8种,占14.5%,石首鱼科4种,占7.3%;调查水域潮间带鱼类群落可分为口内淡水区鱼类群落和河口咸淡水区鱼类群落2组,河口咸淡水区鱼类的物种多样性比口内淡水区略低,其中,口内淡水区以油似鳊和鳊等淡水鱼类为优势种,河口咸水区以斑尾刺虾虎鱼、鲻和棘头梅童等咸淡水鱼类为优势种;二组间鱼类种类组成的平均相异性为80.75%,23种鱼类对平均相异性的累积贡献率>90%,主要贡献来自油鲻、斑尾刺虾虎鱼、棘头梅童鱼、似鳊、红狼牙虾虎鱼、鲫、鳊和长蛇鮈等;春季的研究区鱼类群落丰度与夏、秋两季均存在一定程度的差异,而夏、秋两季间的差异相对较小.就单组鱼类群落丰度而言,水温对其季节变化的影响较盐度大,而盐度对整个河口鱼类群落的影响较水温大.     

黄河口潮间带沉积物细菌群落结构特征

选取黄河口潮间带有植被覆盖和无植被覆盖两个区域采集柱状沉积物,利用实时荧光定量PCR技术和高通量测序技术分析有无植被覆盖沉积物中的细菌群落特征和功能差异,探究影响潮间带细菌群落结构的主要环境因子。结果显示,细菌丰度在有植被区域大于无植被区域。沉积物中细菌群落丰富度和多样性在有植被区域随深度的增加而增加,而在无植被区域其最高值出现在沉积物中层（14-16 cm）。两个区域在门分类水平上以变形菌（Proteobacteria）、绿弯菌（Chloroflexi）、放线菌（Actinobacteria）和酸杆菌（Acidobacteria）为主;属分类水平上的优势类群为芽孢杆菌（Bacillus）、苍白杆菌（Ochrobactrum）、拟无枝菌酸菌（Amycolatopsis）和鞘脂单胞菌（Sphingomonas）等。相关性分析发现盐度和亚硝酸盐浓度对细菌群落多样性和丰富度影响显著。功能预测分析表明,有植被区域沉积物细菌在氨基酸代谢、膜运输和碳水化合物代谢方面功能活跃,而无植被区域细菌则在核酸复制和修复、能量代谢过程方面更为活跃。     

Phytoplankton spring bloom in the Tagus coastal waters: hydrological and chemical conditions

Spatial variability of phytoplankton as well as hydrological and chemical conditions in the Tagus coastal waters were studied during the spring of 1994. The highly patchy distribution of phytoplankton and the community structure were related to the specific abiotic conditions prevailing in the area. Two main water masses were distinguished: a tidally mixed one alongshore Lisbon-cape Espichel and a stratified region strongly related to the Tagus plume river. The latter seems to control, to some extent, the spatial phytoplankton variability and the timing and size of the spring bloom. The highest surficial levels of nutrients, specifically PO₄ ^3–=1.00 M, NO₃ ^–=16.0 M and Si(OH)₄=14.6 M, were clearly associated with Tagus river discharges, while the lowest levels were attained offshore in the zone of maximum chlorophyll a concentrations (30 mg m^–3) reflecting the occurrence of high nutrient consumption. Furthermore, the near depletion of PO₄ ^3– indicates P limitation for phytoplankton growth. The diatom Detonula pumila (0.1×10⁶ cells l^–1) was the dominant species of phytoplankton communities in the mixed zone, alongshore Lisbon-cape Espichel, whereas, the small diatom Thalassiosira sp. (3×10⁶ cells l^–1) was blooming offshore, associated with the stratified region.     

Organotin in the Tagus estuary

The tri(n-butyl)tin (TBT) moiety has been shown to have complex ecotoxicological effects on estuarine populations. In the Tagus the massive die-off of the Portuguese oyster (Crassostrea angulata Lmk), has been attributed to the introduction and use of this contaminant by shipyards. This paper reviews previous work by others and reassesses our results obtained in water and sediments of the Tagus estuary, as a contribution to the understanding of tin geochemistry and organotin speciation in this estuary. Contrary to earlier results, the latest surveys show that in the open waters of the Tagus measurable concentrations of all the three butyltin species occur, exhibiting peak concentrations at two locations that indicate two previously undetected sources of TBT. TBT also presents a peak concentration in sediments near the Lisnave shipyards, as previously suggested. The latest surveys still detected methylated forms of tin, particularly monomethyltin (Me Sn³⁺), in Tagus sediments, with maximum concentrations in the vicinity of urban effluent discharges. The concentrations for TBT and its degradation products found in the Tagus are potentially harmful to the populations of gastropods and endemic bivalves.     

椒江口海域春秋季虾类群落结构及其影响因素

依据2010年春季(4月)和秋季(10月)椒江口海域渔业资源调查资料,分析了虾类的种类组成、优势度、物种数量的空间分布及多样性、相似性等群落结构特征,并对其影响因素进行探讨.结果表明: 椒江口海域春秋两季共出现虾类16种,隶属于8科12属,其中春季14种,秋季12种;春季优势种有中国毛虾、鲜明鼓虾、哈氏仿对虾、细螯虾、日本鼓虾、葛氏长臂虾6种,秋季优势种依次为中华管鞭虾、哈氏仿对虾、周氏新对虾3种.椒江口海域虾类以广温广盐生态类群为主,其次为广温低盐生态类群.多样性分析表明,Margalef种类丰富度指数和Shannon多样性指数较高的站位主要集中在大陈岛西侧海域,整个调查海域的均匀性指数较为稳定.运用聚类和多维标度对群落结构的相似性进行分析,结合水深等环境因子对椒江口虾类的群聚类型进行了讨论,椒江口虾类群落结构的季节变化明显、空间分异显著,水深是导致椒江口海域春秋季虾类群落结构组成差异的主要原因.
     

长江口北支大型底栖动物群落周年变化特征

分析了长江口北支滩涂大型底栖动物的群落结构和多样性变化特征。共采集大型底栖动物78种,包括环节动物7种、软体动物23种、节肢动物28种、脊索动物18种、其它两种,全年优势种有8种。密度为0.08 ind/m^2（1月）-1.24 ind/m^2（7月）,生物量为0.006 g/m^2（2月）-0.58 g/m^2（5月）,Margalef丰富度指数（D）为0.82（1月）-3.88（7月）,Pielou均匀度指数（J）为0.60（9月）-0.86（1月）,Shannon-Wiener多样性指数（H＇）为1.59（2月）-2.76（10月）。底栖动物密度与环境因子进行相关性分析显示,北支潮间带的大型底栖动物群落按照盐度、沉积特征等不同可分为3组,盐度和温度是影响底栖动物群落分布的主导因子。     

Changes in the Tagus nursery function for commercial fish species: some perspectives for management

The Tagus estuary has long been subjected to several human activities and uses. Changes in the estuarine fish community were evaluated based on beam trawl surveys in 1978–1980 and 1994–1996. There was a decrease of abundance of many species that use the Tagus as a nursery, namely bib (Trisopterus luscus), five bearded rockling (Ciliata mustela), tub gurnard (Trigla lucerna), and flounder (Platichthys flesus), possibly due to reduction of the water quality. In 1994–1996, only sea bass (Dicentrarchus labrax), sole (Solea solea) and Solea senegalensis Kaup, 1858, were found within the nursery grounds, showing an irregular pattern of abundance. Condition and vacuity index were highly variable. The major problems affecting the fish community, namely pollution, fishery regulation and waterflow regulation, are discussed in relation to the management and conservation of this estuarine system.