Floodplain connectivity, disturbance and change: a palaeoentomological investigation of floodplain ecology from south-west England

1. Floodplain environments are increasingly subject to enhancement and restoration, with the purpose of increasing their biodiversity and returning them to a more 'natural' state. Defining such a state based solely upon neoecological data is problematic and has led several authors to suggest the use of a palaeoecological approach. 2. Fossil Coleopteran assemblages recovered from multiple palaeochannel fills in south-west England were used to investigate past floodplain and channel characteristics during the mid- to late-Holocene. Ordination of coleopteran data was performed using Detrended Correspondence Analysis (DCA) and produced clear and discrete clustering. This clustering pattern is related to the nature of the environment in which assemblages were deposited and hence channel configuration and dynamics. 3. The DCA clustering pattern is strongly related to measures of ecological evenness, and a strong relationship between these indices and the composition of the water beetle assemblage within samples was revealed. Repeating the ordination with presence-absence data results in a similar pattern of clustering, implying that assemblage composition is crucial in determining cluster placement. 4. As assemblage composition is primarily a function of floodplain topography and hence disturbance regime, we attempt to relate these data to the Intermediate Disturbance Hypothesis (IDH). A significant positive correlation was found between ecological diversity (Shannon's H') and Axis 1 of all ordinations in predominantly aquatic assemblages.     

Establishing realistic restoration targets for nutrient-enriched shallow lakes: linking diatom ecology and palaeoecology at the Attenborough Ponds, U.K.

Eutrophication is a major problem for shallow lakes in the U.K. lowlands. Over the last few decades issues relating to the management and restoration of these lakes have come to the fore, including the need to develop methods for establishing realistic restoration targets. One group of lakes for which restoration is a key concern are the Attenborough Ponds in the English Midlands, an interconnected series of shallow, nutrient-enriched gravel-pit lakes. In November 1972, the highly polluted River Erewash was diverted into the Attenborough Ponds. To determine the ecological effects of this event and to establish restoration goals for this lake system, two complimentary studies were undertaken here; (i) monitoring of the ecology and sedimentary representation of diatom communities in a disturbed lake connected to the R. Erewash (Tween Pond: high nutrient concentrations, no submerged macrophytes) and a relatively undisturbed lake isolated from the R. Erewash (Clifton Pond: lower nutrient concentrations, abundant submerged macrophytes), and; (ii) examination of the sedimentary diatom record in a short sediment core collected from the chosen disturbed lake (Tween Pond). The species composition, seasonality, relative productivity and sedimentary representation of planktonic and periphytic diatom communities were very different in Tween and Clifton Ponds. In Tween Pond two major phases of planktonic diatom production/sedimentation were observed during March–May and July–September. By contrast, planktonic diatoms were restricted to a single spring peak in Clifton Pond and after May there was a switch to the dominance of periphytic diatoms associated with the development of submerged macrophytes. The 1972 diversion of the River Erewash was clearly reflected in the sedimentary diatom record from Tween Pond, by; (i) the abrupt shift to planktonic diatom dominance, and; (ii) increasing percentages of late summer–autumn associated planktonic diatom species. These changes suggest both significant nutrient enrichment and the switch from submerged macrophyte to phytoplankton dominance. Numerical matching of pre-1972 diatom assemblages with surface sediment assemblages in the gravel-pits using Principal Components Analysis (PCA) and a squared chord distance measure revealed no close analogues. Nevertheless, similarities between; (i) percentages of different diatom habitat and seasonality groups, and; (ii) pre-1972 and contemporary macrophyte survey data suggested that Clifton Pond is probably a good pre-diversion analogue for habitat structure (e.g. macrophyte biomass, composition and architecture) and phenology (e.g. diatom and macrophyte seasonality) in the Ponds. The practical value of combining space-for-time substitution and palaeoecological approaches in restoration ecology studies of shallow lakes is discussed.     

Learning from the past: Diatoms as palaeoecological indicators of changes in marine environments

The North Sea is seriously threatened by a variety of pollution sources. Terrestrially derived effluents are causing extensive environmental damage and changes to ecosystems of both the offshore and coastal waters. Coastal and estuarine communities are being lost to reclamation projects, and there is the future threat of rising sea level associaed with global warming. The spatial and temporal extent of recent anthropogenic changes are largely unknown due to the paucity of background information. The possible role of palaeoecological methodology in providing ‘reference levels’ against which current status can be compared, and their importance for restoration and policy decisions, are presented. The usefulness of diatoms as environmental indicators is illustrated. The extent of natural and anthropogenic changes on coastal habitats are demonstrated by reference to the Holocene evolution of the coastline of The Netherlands. Possible profitable areas for further research are outlined,e.g. a diatom nutrient calibration data set for shallow marine embayments.     

The root of the problem: palaeoecology of distinctive crinoid attachment structures from the Silurian (Wenlock) of Gotland

The holdfast (attachment structure) is the most understudied aspect of the palaeoecology of the endoskeleton of fossil crinoids. A new collection of well-preserved holdfasts from a recently reopened quarry at Hunninge, Gotland, in Homerian (upper Wenlock) strata includes several morphologies. The most common are terminal dendritic radicular holdfasts (TDRHs) that may be derived from the cladid Ennallocrinus d'Orbigny. These have a consistent morphology of five, equally spaced, long radices that spread across the sea floor. These crinoids were gregarious, and TDRHs in a group commonly show the same radice orientations. The radices have a large axial canal compared with those of modern crinoids; each included, at least, nervous tissues. Taken together, these features suggest that, apart from attachment, these distinctive TDRHs may have served a sensory function. Other holdfasts in this assemblage also show monospecific aggregations, perhaps suggesting biochemical attraction such as that shown by certain other sessile invertebrates such as barnacles.     

Evolutionary palaeoecology of symbioses between bryozoans and hermit crabs

Modern hermit crabs form associations with many organisms which encrust, bore into, or cohabit the living chambers of gastropod shells occupied by the crabs. Among these hermit crab symbionts are bryozoan species which develop massive, commonly multilayered, colonies encrusting hermit crab shells. These colonies extend the living chamber of the crab through a characteristic process of helicospiral tubular growth originating from the shell aperture. The scant information available on the ecology of Recent bryozoan‐hermit crab symbioses is reviewed. Symbioses have been recorded from intertidal to upper slope environments, and from tropical to cold temperate zones. None of the hermit crab species are obligatory symbionts of bryozoans, and the majority of the modern bryozoan species involved are also not obligatory symbionts. Fossil examples always lack the hermit crabs, which have a poor fossilization potential; however, the distinctive tubular growth pattern and other features of the bryozoans enable recognition of ancient examples of the symbiosis. The earliest inferred associations between bryozoans and hermit crabs date from the Mid Jurassic, but associations remained uncommon until the Neogene. A remarkably wide taxonomic diversity of Recent and fossil bryozoans are known or inferred symbionts of hermit crabs. The broad evolutionary pattern of the association demonstrates multiple originations of the symbiosis by bryozoans belonging to at least 5 cyclostome and 12 cheilostome families. Only the Miocene‐Recent cheilostome family Hippoporidridae has an evolutionary history closely tied to symbiosis with hermit crabs. There is no evidence for coevolution.     

Finding the Minimum Sample Richness (MSR) for multivariate analyses: implications for palaeoecology

Many techniques have been developed to estimate species richness and beta diversity. Those techniques, dependent on sampling, require abundance or presence/absence data. Palaeontological data is by nature incomplete, and presence/absence data is often the only type of data that can be used to provide an estimate of ancient biodiversity. We used a simulation approach to investigate the behaviour of commonly used similarity indices, and the reliability of classifications derived from these indices, when working with incomplete data. We drew samples, of varying number and richness, from artificial species lists, which represented original life assemblages, and calculated error rates for classifications of the parent lists and samples. Using these results, we estimated the Minimum Sample Richness (MSR) needed to achieve 95% classification accuracy. Results were compared for classifications derived from several commonly used similarity indexes (Dice, Jaccard, Simpson and Raup–Crick). MSR was similar for the Dice, Jaccard and Simpson indices. MSR for the Raup–Crick index was often much lower, suggesting that it is preferable for classifying patchy data, however the performance of this index was less stable than the other three in the simulations, which required an even lower MSR. MSR can be found for all presence/absence data from the contour graphs and equations as long as the absolute species richness and the beta diversity can be estimated.     

The functional morphology and palaeoecology of the Dinantian brachiopod Levitusia

The functional morphology of Levitusia , based principally upon the type-species L. humerosa (J. Sowerby), is described and compared with living brachiopods. It is concluded that Levitusia species lived in tropical Dinantian seas with agitated waters and at shallow depths, perhaps no more than 50 m. The lithologies in which specimens are found support this view and indicate the need for some revision in our interpretations of some Dinantian sedimentary environments. Further evidence for the synonymy of L. christiani (de Koninck) in L. humerosa is presented.     

Biological affinity, phenotypic variation and palaeoecology of Tetradium Dana, 1846

Comparisons of morphologies and modes of life of the Ordovician fossil Tetradium Dana, 1846, with chaetetid sponges, tabulate corals, and Recent rhodophytes show that several defining Tetradium characteristics are incompatible with its chaetetid and tabulate classifications. All Tetradium characteristics fit a rhodophyte identification, however, as a calcified uniaxial corticated florideophyte. It is argued from functional morphology that the fundamental subsquare cross-section of the Tetradium tube is an adaptation for close packing, which implies that the basic growth form is compact and should have developed where conditions were optimal. More open forms are derived from it and probably occupied less-favourable environments.
Palaeoecological studies from the Ottawa Valley, Canada, show that the Tetradium growth form is correlated with environmental stress and became more open as salinity increased: i.e. the compact T. fibratum form lived in normal marine conditions, radiating bundles of T. cellulosum tubes in low to middle hypersalinity and single T. syringoporoides tubes in high hypersalinity. Different Tetradium growth forms from the study area are phenotypic variants of a single species, rather than different species and genera. Therefore, classifications that divide Tetradium into different species and genera based only on growth form have no biological basis. There is little evidence of interspecific interactions with Tetradium .     

Integrated palaeoecological evidence for biodiversity at the floodplain-forest margin

This paper presents the results of a combined palynological and palaeoentomological investigation into the changing diversity of Holocene floodplain forest biota at Bole Ings in the lower reaches of the River Trent. The aim in combining the two techniques represents an attempt to overcome some of the inherent differences of scale and resolution which characterize different types of fossil species data. The two lines of ecofactual evidence, pollen and beetle remains indicate changes in the biodiversity of the floodplain, both in terms of the diversity and abundance of individual species, habitats and ecosystem structure. The results of the study demonstrate the potential of this approach in tracing the decline in plant and entomofaunal diversity at the floodplain forest margin. Although there are recognized limitations imposed by taphonomic uncertainties, taxonomic resolution and restricted ecological data, the combined results provide added details of variations in both species composition and structural diversity within the landscape. The results emphasize the need for multidisciplinary research design in palaeoecological investigations of biodiversity.     

Palaeofloristic assemblages and palaeoecology of the Lower Oligocene Bembridge Marls, Hamstead Ledge, Isle of Wight

A sequence of nine, plant-macrofossil-bearing horizons has been recognized in the Lower Oligocene from the Isle of Wight, England. The plant fossils are contained in finely laminated, olive-brown to black silty-clays and clays. Some horizons exhibit rhythmic alternation of sediment couplets; others show evidence of bioturbation and rootlet penetration. These horizons are included within a sequence of finely laminated greenish grey silty-clays and clays, largely devoid of plant macrofossil material. The plant-bearing horizons contain abundant fruits, seeds, fern sporangia, Azolla megaspores, and rare leaves. The nearest living relatives of the fossils all inhabit an aquatic or marginal aquatic environment. The associated fossil fauna includes lake bottom and lake margin species. The palynoflora of the plant-bearing and immediately underlying horizons includes large numbers of planktonic algae and limited representatives of a forest vegetation. It shows a strong relationship between the occurrences of Sparganiaceaepollenites pollen and of Typha macrofossils. Palaeoecological interpretations of this plant-fossil-bearing sequence are discussed with particular reference to modern environments.
One new genus and three new species are described. Emendations are presented for four other species. Stratiotes leaf margin teeth are described.     

Nitrate loss from a restored floodplain in the Lower Cosumnes River, California

Floodplain restoration has been advocated as a means to restore several ecological services associated with floodplains: water quality improvement, fish rearing habitat, wildlife habitat, flood control, and groundwater recharge. A history of agricultural encroachment on the lower Cosumnes River has resulted in extensive channelization and levee construction. In fall 1998, an experimental floodplain was established by breaching a levee in order to restore the connection between the main channel and its historic floodplain. In this study, we examined how effective this newly restored floodplain was at processing nitrate (NO ₃ ⁻ ) before reentering the main channel downstream. Two methods were used to examine nitrate loss. In December 2001, we determined denitrification potentials of the floodplain soils before seasonal flooding inundated the floodplain. Next, we conducted a series of field soil column (mesocosm) experiments from March to June 2002 to study NO ₃ ⁻ -N loss from the overlying water in both sandy and clayey soils and at three levels of NO ₃ ⁻ -N (ambient, +1 mg N l⁻¹, +5 mg N l⁻¹). In addition, we examined NO ₃ ⁻ -N loss from mesocosms with water only to determine if loss was related primarily to soil or water column processes. Denitrification potentials were highly variable ranging from 1.6 to 769 ng N₂O–N cm⁻³ h⁻¹. In addition, the denitrification potential was highly correlated with the amount of bioavailable carbon indicating that carbon was a limiting factor for denitrification. Nitrate-N loss rates from mesocosms ranged from 2.9 to 21.0 μg N l⁻¹ h⁻¹ over all treatments and all 3 months examined. Significant loss of NO ₃ ⁻ -N (60–93%) from the water only treatment only occurred in June when warmer temperatures and solar radiation most likely increased NO ₃ ⁻ -N uptake by phytoplankton. When scaled up, potential NO ₃ ⁻ -N loss from the restored floodplain represented 0.6–4.4% of the annual N load from the Lower Cosumnes River during a typical wet year and ~24% during a dry year. During dry water years, the effectiveness of the floodplain for reducing nitrate is limited by the amount of N supplied to the floodplain. Results from this study suggest that restored floodplains can be an effective NO ₃ ⁻ sink.     

Learning from a mountain: Interview with Bruce Clarkson

Bruce Clarkson is recognised as one of New Zealand's foremost authorities on ecological restoration, with a research and management focus on restoring indigenous vegetation communities in cities. He urges optimism in the face of change, by emphasising the importance of long‐term and broad‐scale perspectives.     

Learning from the past: historical aspects of bacterial toxins as pharmaceuticals

Botulinum neurotoxins are the most poisonous substances known to humankind, but also are the bacterial toxins most frequently used as pharmaceuticals to benefit humans. The discovery of botulinum toxins and development into a useful drug is unique and fascinating, dating back to the early 19th century, when Justinus Kerner first recognized that botulism was caused by a biological toxin and suggested its use for medicinal purposes. This was translated into reality in 1980, when Alan Scott for the first time used the toxins to successfully treat strabismus. Now a subset of botulinum toxins are widely used for cosmetic applications, treatment of various movement disorders, pain and many other syndromes, and further developments using other botulinum toxins or recombinant molecules engineered from subdomains are promising.     

Priming the productivity pump: flood pulse driven trends in suspended algal biomass distribution across a restored floodplain

1. Chlorophyll a (Chl a) distribution across a 0.36 km² restored floodplain (Cosumnes River, California) was analysed throughout the winter and spring flood season from January to June 2005. In addition, high temporal‐resolution Chl a measurements were made in situ with field fluorometers in the floodplain and adjacent channel. 2. The primary objectives were to characterise suspended algal biomass distribution across the floodplain at various degrees of connection with the channel and to correlate Chl a concentration and distribution with physical and chemical gradients across the floodplain. 3. Our analysis indicates that periodic connection and disconnection of the floodplain with the channel is vital to the functioning of the floodplain as a source of concentrated suspended algal biomass for downstream aquatic ecosystems. 4. Peak Chl a levels on the floodplain occurred during disconnection, reaching levels as high as 25 μg L^?1. Chl a distribution across the floodplain was controlled by residence time and local physical/biological conditions, the latter of which were primarily a function of water depth. 5. During connection, the primary pond on the floodplain exhibited low Chl a (mean = 3.4 μg L^?1) and the shallow littoral zones had elevated concentrations (mean = 4.6 μg L^?1); during disconnection, shallow zone Chl a increased (mean = 12.4 μg L^?1), but the pond experienced the greatest algal growth (mean = 14.7 μg L^?1). 6. Storm‐induced floodwaters entering the floodplain not only displaced antecedent floodplain waters, but also redistributed floodplain resources, creating complex mixing dynamics between parcels of water with distinct chemistries. Incomplete replacement of antecedent floodplain waters led to localised hypoxia in non‐flushed areas. 7. The degree of complexity revealed in this analysis makes clear the need for high‐resolution spatial and temporal studies such as this to begin to understand the functioning of dynamic and heterogeneous floodplain ecosystems.     

Palynology of the Toarcian-Aalenian Global Boundary Stratotype Section and Point (GSSP) at Fuentelsaz (Lower-Middle Jurassic, Iberian Range, Spain)

The Fuentelsaz Section is located in the Castilian Branch of the Iberian Range (Guadalajara, Spain). Its exceptional Lower-Middle Jurassic transition outcrops led to its designation as the Global Boundary Stratotype Section and Point for the base of the Aalenian. The sediments of the Toarcian-Aalenian transition at Fuentelsaz are composed of marls with interbedded limestones in rhythmic alternation. Marls are dominant in the Toarcian and the Opalinum Zone up to the middle part of the Comptum Subzone. In the remaining Comptum Subzone, marly materials are scarce and limestones predominate. Sedimentation at Fuentelsaz took place over an extensive marine epeiric carbonate platform that was well connected with the open sea. In the Fuentelsaz Section, a total of 43 palynomorph taxa were recorded: 23 spore taxa, 13 pollen taxa, 4 acritarchs, 2 prasinophytes and 1 dinoflagellate cyst. The studied sediment samples were always dominated by terrestrial allochthonous miospores. In general, miospore assemblages are biased due to the transport of pollen from land or islands to the continental platform. Spheripollenites, Classopollis or indeed both pollens numerically dominate the assemblages. Other miospores appear in low numbers. Aquatic palynomorphs are also scarce; Micrhystridium lymensis is the most common. Five palynological assemblages (PA) were distinguished: PA1, PA2 and PA3 are Toarcian in age, PA4 is located at the boundary between the Toarcian and the Aalenian and PA5. This latter palynological assemblage which is lower Aalenian in age shows a strong reduction in palynomorph diversity and preservation in the Comptum Subzone. Palaeoecological analysis of the palynomorphs indicated the presence of calm, oligotrophic sea water. The palaeofloral communities of gymnosperms and vascular cryptogams—which grew in subtropical arid conditions—were poorly diversified.     

Toward using <Emphasis Type="Italic">Margaritifera falcata</Emphasis> as an indicator of base level nitrogen and carbon isotope ratios: insights from two California Coast Range rivers

Measurements of freshwater mussel tissue are potentially very useful for determining base-level isotopic values for food web studies in aquatic environments. As long-lived, filter-feeding organisms, mussels have the potential to spatially and temporally average the isotopic baseline signal. Following from earlier studies that focused on lake environments, this study investigates the stable carbon and nitrogen isotope ratios in tissue of the river dwelling freshwater mussel, Margaritifera falcata, in two extensively studied northern California coast range rivers, the South Fork Eel and Navarro. We highlight advantages and challenges for using riverine mussel isotopes as indicators of baselines. ¹³C of primary producers is known to vary with habitat along the South Fork Eel channel, but our measurements show no such variations, demonstrating that riverine mussels do preserve a spatially averaged measure of instream derived food sources. Mean ¹³C and ¹⁵N are shown to be markedly different in the two rivers, reflecting differences in food sources and possibly watershed land use. We also found that ¹⁵N of mussel tissue increased by approximately 2 with mussel age in both rivers. This suggests it is important to consider age and size effects when estimating baseline values from mussel tissues.