Phylogenetic relationships among the skunks: A molecular perspective

Phylogenetic relationships among the three recognized genera of skunks (Mephitis, Spilogale, andConepatus) were examined using allozymes and nucleotide sequence data from portions of the cytochromeb gene and displacement loop of the mitochondrial genome. The data sets indicated thatMephitis andSpilogale shared a common ancestor after they diverged fromConepatus. Intrageneric relationships revealed that the level of genetic divergence between the two species ofSpilogale was equal to the level of divergence between the two species ofMephitis, with the two North American species ofConepatus possessing the least amount of genetic divergence.     

Karyotypic study of titi monkeys,Callicebus moloch brunneus

A karyotypic study on a subspecies of the dusky titi,Callicebus moloch brunneus, was carried out and a third karyotype ofC. moloch was discovered. The chromosome number of this subspecies is 48. The autosomes consist of 5 subtelocentric, 5 submeta- or metacentric, and 13 acrocentric chromosome pairs. The X chromosome and the Y chromosome are submetacentric and metacentric, respectively. A comparative study with other subspecies of theC. moloch group (i.e.,C. m. cupreus andC. m. ornatus with 2n=46 andC. m. donacophilus with 2n=50) suggests that the karyotype ofbrunneus occupies a position intermediate between the two other karyotypes ofC. moloch, but nearer to that of 2n=50. The presumed total differences betweenbrunneus andcupreus comprise one Robertsonian rearrangement, one centromeric transposition and four pericentric inversions, and those betweenbrunneus anddonacophilus involve one translocation or breakage (possibly corresponding to two events, that is, one Robertsonian rearrangement and one centromeric transposition).     

Comparison of the Giemsa C-banded and N-banded karyotypes of twoElymus species,E. dentatus andE. glaucescens (Poaceae: Triticeae)

The karyotypes ofElymus dentatus from Kashmir andE. glaucescens from Tierra del Fuego, both carrying genomesS andH, were investigated by C- and N-banding. Both taxa had 2n = 4x = 28. The karyotype ofE. dentatus was symmetrical with large chromosomes. It had 18 metacentric, four submetacentric and six satellited chromosomes. The karyotype ofE. glaucescens resembled that ofE. dentatus, but a satellited chromosome pair was replaced by a morphologically similar, non-satellited pair. The C-banding patterns of both species had from one to five conspicuous and a few inconspicuous bands per chromosome. N-banding differentiated the chromosomes of the constituent genomes by producing bands in theH genome only. TheS genomes of both species were similar with five metacentric and two satellited chromosomes having most conspicuous C-bands at telomeric and distal positions. They resembled theS genome of the genusPseudoroegneria. TheH genomes had four similar metacentric and two submetacentric chromosomes. The seventhH genome chromosome ofE. dentatus was satellited, that ofE. glaucescens nonsatellited, but otherwise morphologically similar. The C-bands were distributed at no preferential positions. TheH genome ofE. dentatus resembles theH genomes of some diploidHordeum taxa.     

Karyotypes of Cerastoderma glaucum (Bivalvia) from Baltic and Mediterranean populations

Chromosomes of C. glaucum from Baltic (Gdansk Bay) and Mediterranean (Thau lagoon, Sète) populations were studied using karyometric analysis and silver-staining. The karyotype of the Gdansk population consists of three metacentric, ten submetacentric and six subtelocentric chromosome pairs. The karyotype of the Thau population shows four metacentric, nine submetacentric and six subtelocentric pairs. Nucleolus organizer regions were found terminally on the second largest submetacentric chromosome pair of the Gdansk population and on the second largest metacentric chromosome pair of the Thau population. This suggests a cytotaxomomic difference between these two geographically isolated populations. Striking differences exist between C. glaucum and C. edule karyotypes, probably resulting from a long divergence time.     

The karyotype of the Azumi shrew<Emphasis Type="Italic">Sorex hosonoi</Emphasis>

Karyotype ofSorex hosonoi Imaizumi, 1954 from Mt. Asama in central Honshu, Japan, were examined with conventional staining and G-banding using ASG methods. The diploid and fundamental autosomal arm numbers were 42 and 66, respectively. The autosomes consisted of seven metacentric, six submetacentric, and seven acrocentric pairs. The sex chromosomes were large-sized acrocentric X and small-sized subtelocentric Y. The relationship between the karyotypes ofS. hosonoi andS. shinto was explained by one pericentric inversion at the no. 5 ofS. hosonoi and the no. 9 ofS. shinto. A rearrangement inS. shinto-hosonoi differed from the rearrangements occurring on no. 5 ofS. shinto-caecutiens/unguiculatus.     

Taxonomic studies ofAsarum sensu lato

The karyotype and the C-banding pattern in two species ofHexastylis andAsarum epigynum were analysed in detail, and the results obtained were compared with those of the other species ofAsarum, Asiasarum andHeterotropa previously reported. The present results were partially different from the previous reports related to the karyotypes of these species. The karyotype observed in two species ofHexastylis (2n=26) was represented by ten pairs of metacentric chromosomes and three pairs of small subtelocentric chromosomes, which is very similar to that ofAsiasarum in eastern Asia. The C-banding patterns ofHexastylis andAsiasarum, however, were clearly different from each other. A striking difference was found in one of the three pairs of small subtelocentric chromosomes. A Formosan speciesAsarum epigynum had the somatic chromosome number 2n=12 and a highly asymmetrical karyotype composed of mainly subtelocentric chromosomes. These karyological features were remarkably different from those of the other groups inAsarum s.l.     

Molecular phylogeny ofCrocidura shrews in northeastern Asia: A special reference to specimens on Cheju Island, South Korea

Molecular phylogeny of crocidurine shrews (Insectivora, Soricidae) in northeastern Asia was investigated to confirm the taxonomic status of unidentified specimens ofCrocidura from Cheju Island, South Korea. Phylogenetic trees were constructed by neighbor-joining (NJ) and maximum likelihood (ML) methods, based on mitochondrial cytochromeb gene sequences (402 base pairs) of 37 individuals of seven crocidurine species and three unidentified specimens from 31 localities mainly in northeastern Asia. Phylogenetic position of the three unidentified specimens from Cheju Island were compared with those of Suncus murinus,C. attenuata, C. dsinezumi, C. lasiura, C. sibirica, C. suaveolens, andC. watasei. Both in NJ and ML trees, the three unidentified specimens were included in the cluster ofC. dsinezumi and were obviously different fromC. suaveolens on Cheju Island. Thus, the present investigation demonstrated that bothC. suaveolens andC. dsinezumi exist on Cheju Island.     

Karyotypes of the most primitive catfishes (Teleostei: Siluriformas: Diplomystidae)

Karyotypes of Diplomystes composensis and Diplomystes nahuelbutaensis were the same diploid number (n= 56).The chromosome formula for D. composensis was 16 metacentric + 24 submetacentric + 8 subtelocentric + 8 telocentric chromosomes and for D. nahuelbutaensis was 14 metacentric + 26 submetacentric + 8 subtelocentric +8 telocentric chromosomes. In contrast, the differences in the chromosomal C-banding patterns between these species was large. For instance, chromosome pairs 5,6, and 7 of D. nahuelbutaensis showed heterochromatic centromeres and pairs 23, 24, 27, and 28 were entirely heterochromotic. Diplomystes composensis showed conspicuous C-banded blocks in pairs 7, 24, and 25 (chromosome pair 7 had one heterochromatic arm, chromosome pair 24 was entirely heterochromatic, and chromosome pair 25 had heterochromatin close to centromere). Comparison with other ostariophysan karyotypes (e.g. gymnotiforms, characiforms, and cypriniforms), does not allow any conclusions about the ploesiomorphic catfish condition, because the karyotypes of the outgroups are too variable. A synapomorphy shared by characiforms, gymnotiforms, and diplomystid catfishes is the presence of more metacentric to submetacentric than substelocentric to telocentric chromosomes. Cypriniforms are more primitive because they have more subtelocentric to telocentric than metacentric to submetacentric chromosomes.     

Phylogeny of the Avian Family Ciconiidae (Storks) Based on CytochromebSequences and DNA–DNA Hybridization Distances

This study is a phylogenetic analysis of the avian family Ciconiidae, the storks, based on two molecular data sets: 1065 base pairs of sequence from the mitochondrial cytochromebgene and a complete matrix of single-copy nuclear DNA–DNA hybridization distances. Sixteen of the nineteen stork species were included in the cytochromebdata matrix, and fifteen in the DNA–DNA hybridization matrix. Both matrices included outgroups from the families Cathartidae (New World vultures) and Threskiornithidae (ibises, spoonbills). Optimal trees based on the two data sets were congruent in those nodes with strong bootstrap support. In the best-fit tree based on DNA–DNA hybridization distances, nodes defining relationships among very recently diverged species had low bootstrap support, while nodes defining more distant relationships had strong bootstrap support. In the optimal trees based on the sequence data, nodes defining relationships among recently diverged species had strong bootstrap support, while nodes defining basal relationships in the family had weak support and were incongruent among analyses. A combinable-component consensus of the best-fit DNA–DNA hybridization tree and a consensus tree based on different analyses of the cytochromebsequences provide the best estimate of relationships among stork species based on the two data sets.     

The karyotype ofFestucopsis serpentini (Poaceae Triticeae) from Albania studied by banding techniques and in situ hybridization

The karyotypes of two populations ofFestucopsis serpentini (2n = 2x = 14) endemic to Albania were investigated in detail by Giemsa C- and N-banding, AgNO₃ staining, and in situ hybridization with an rDNA probe. The complements consisted of 14 large chromosomes, 10 metacentric and 4 SAT-chromosomes, a metacentric and a submetacentric pair. SAT-chromosomes from one population carried exclusively minute satellites, whereas SAT-chromosomes from another population also carried larger polymorphic satellites, suggesting a geographical differentiation. The existence of four chromosomes with nucleolus forming activity was established through AgNO₃ staining; however, the rDNA probe additionally hybridized to intercalary positions in the short arms of two metacentric chromosomes revealing two inactive rDNA sites. C-banding patterns comprised from zero and up to four very small to larger, generally telomeric bands per chromosome giving low levels of constitutive heterochromatin. Similarities in chromosome morphology and C-banding patterns identified the homologous relationships of all chromosomes in one population, but of three pairs only in the other. Reliable identification of homologous chromosomes between plants was only possible for the SAT-chromosomes. A comparison between the C-banded karyotypes ofF. serpentini andPeridictyon sanctum supports their position in two genera.     

Karyology and karyotype analysis of diploid freshwater planarian populations of the Dugesia gonocephala group (Platyhelminthes,Tricladida) found in Sardinia

Karyology and karyotype analysis were carried out on freshwater planarian populations of the Dugesia gonocephala group. The strains studied were all diploid with chromosomic number 2n = 16; n = 8. They came from 12 sites mainly localized on the west of the island of Sardinia. Three karyotypes indicated with the letters A, B and C were found in which eight homomorphic pairs of chromosomes were easily identified. In karyotype A all chromosomes are metacentric. Ten populations of the twelve examined showed this karyotype which appears to be the most common. In karyotype B the seventh pair of chromosomes is submetacentric. This karyotype is quite common having been previously found in another eight Sardinian localities. Karyotype C differs from the others in having submetacentric third and seventh pairs of the chromosome complement. It was found in only one locality. The differences observed between these three karyotypes could be interpreted either as sign of differentiation at species level, or as an intraspecific variation due to chromosome mutations (pericentric inversions). This revised version was published online in July 2006 with corrections to the Cover Date.     

Chromosomes of Syrphidae. VI. The tribe Pipizini

The karyotypes of 24 species of the tribe Pipisini (Diptera: Syrphidae) are described and illustrated. Nearly all the species of Neocnemodon, Pipiza and Pipizella have 2n=8 chromosomes consisting of a short telocentric XY pair and three metacentric pairs increasing in relative length from long to very long. Pair II chromosomes in several Pipiza species have high metacentric to low submetacentric arm ratios. One Parapenium species is tentatively reported as having five pairs and another five or six pairs. The karyological evidence favours placing the tribe Pipizini in the subfamily Syrphinae rather than in the subfamily Milesiinae.     

Karyological observations on Turbellaria Proseriata: karyometric analysis ofMonocelis fusca,M. lineata (Monocelididae) andParotoplana macrostyla (Otoplanidae)

A karyometric analysis of the chromosome set of the marine turbellariansMonocelis fusca, M. lineata andParotoplana macrostyla has been carried out. The karyotype of the twoMonocelis species investigated (2n=6) is formed by three pairs of small and similarly sized chromosomes: InM. fusca, chromosome 1 is metacentric, chromosome 2 acrocentric and chromosome 3 is subtelocentric.M. lineata also presents one pair of metacentric chromosomes (chromosome 2), while chromosomes 1 and 3 are submetacentric.P. macrostyla (2n=12) reveals two pairs of large metacentric and four pairs of small chromosomes, three of which are metacentric, whereas the last is subtelocentric.     

湘华鲮(♂)×鲮鱼(♀)杂交一代与其双亲染色体组型的比较研究

三种鱼的二倍体数目完全相同,均为2n=50。三种鱼的核型差异较大,尤其是双亲间的组型在形态上有明显的差异。然而杂交一代的m、sm二组染色体的组型却十分接近母体,这二组的染色体数占了全部染色体总数的88%。杂交一代染色体组型中的st和t二组染色体虽与双亲有所不同,但与双亲中这二组染色体组型的差异来比要小一些。三种鱼的中期分裂相中,未曾发现带有随体的染色体,也未发现与性别有关的异型染色体的存在。       

Karyotypic differences and evolutionary tendencies of some species from the subgenusObliquodesmus Mlad. of genusScenedesmus Meyen (Chlorophyta, Chlorococcales)

Karyotype structures ofScenedesmus acuminatus (Lagerch.) Chod. andScenedesmus pectinatus Meyen are compared. The karyotype ofS. acuminatus (n = 5) is described for the first time. It reveals four large metacentric and one large submetacentric chromosomes (4M + 1SM). The established karyotype differences have been helpful in clarifying the taxonomic position of these two species. The cytological analyses of other related clonal cultures suggest an evolutionary transition fromS. pectinatus towardsS. regularis throughS. pectinatus f.regularis, which correlates with the morphological data about their variability. These results are discussed from the cytogenetic, morphological and evolutionary point of view. On the basis of the karyotypic analysis, it was confirmed that from a taxonomic point of viewS. pectinatus, S. acuminatus andS. regularis are separate biological species.     

Cytogenetic characterisation of the razor shells Ensis directus (Conrad, 1843) and E. minor (Chenu, 1843) (Mollusca: Bivalvia)

The European razor shell Ensis minor (Chenu 1843) and the American E. directus (Conrad 1843) have a diploid chromosome number of 38 and remarkable differences in their karyotypes: E. minor has four metacentric, one metacentric–submetacentric, five submetacentric, one subtelocentric and eight telocentric chromosome pairs, whereas E. directus has three metacentric, two metacentric–submetacentric, six submetacentric, six subtelocentric and two telocentric pairs. Fluorescent in situ hybridisation (FISH) using a major ribosomal DNA probe located the major ribosomal genes on one submetacentric chromosome pair in both species; FISH with a 5S ribosomal DNA (5S rDNA) probe rendered one chromosomal (weak) signal for E. minor and no signal for E. directus, supporting a more dispersed organisation of 5S rDNA compared to the major ribosomal genes. The vertebrate telomeric sequence (TTAGGG) _n was located on both ends of each chromosome, and no interstitial signals were detected. In this work, a comparative karyological analysis was also performed between the four Ensis species analysed revealing that the three European species studied so far, namely E. minor, E. siliqua (Linné 1758) and E. magnus Schumacher 1817 show more similarities among them than compared to the American species E. directus. In addition, clear karyotype differences were found between the morphologically similar species E. minor and E. siliqua.     

Evolution of the Gibbon Subgenera Inferred from CytochromebDNA Sequence Data

DNA sequences for the mitochondrial cytochromebgene from the four extant gibbon subgenera are described. The data confirm that the gibbon subgenera evolved from a common hylobatid ancestor and suggest that they diverged from each other after the divergence of the extant African great ape species. The cytochromebgene does not resolve the evolutionary relationships between the gibbon subgenera themselves.     

The karyotypes ofMicroseris bigelovii,M. douglasii,andM. pygmaea (Asteraceae)

The karyotypes of the three annuals,Microseris bigelovii, M. douglasii andM. pygmaea, consist of 2n = 18, small, submetacentric chromosomes. Length, centromere position, C-banding pattern, silver staining of NOR's, and the use of base specific fluorochromes, allow the identification of four of the nine chromosome pairs. The banding pattern ofM. bigelovii andM. pygmaea is identical, but intraspecific differences are found between strains ofM. douglasii.     

Chromosome banding study of the golden loach,Sabanejewia aurata balcanica from Slovakia (Cobitidae)

The karyotype of a subspecies of the golden loach,Sabanejewia aurata balcanica from eastern Slovakia was studied by conventional Giemsa staining, Ag-NOR staining, and C-banding. The diploid chromosome number was 2n = 50. The karyotype comprised 2 pairs of metacentric, 6 pairs of submetacentric and 17 pairs of subtelocentric to acrocentric chromosomes. Both metacentric pairs and 2 large subtelocentric pairs had massive pericentromeric blocks, while all other elements had only weak blocks of heterochromatin. The NORs were localized on the short arms of one middle-sized subtelocentric pair. The karyotype ofS. a. balcanica differs from that ofS. aurata kubanica, suggesting chromosomal polymorphism of this widely distributed, polytypic cobitid species. The polymorphic karyotypes of the golden loach may thus demonstrate transient stages, linking primitive and advanced cobitid karyotypes.     

Chromosomes of the liver fluke, Clonorchis sinensis

A karyological study was carried out in order to compared the chromosome numbers, chromosome morphologies and karyotypes of the oriental liver fluke, Clonorchis sinensis (Trematoda: Opisthorchiidae), collected from Korea and China. Chromosome preparations were made by means of air-drying method. The chromosome number was 2n = 56 in both Korean and Chinese flukes, and chromosomes were divided into two groups based on this size; consisting of 8 pairs of large and 20 pairs of small chromosomes. However, the karyotypes showed some differences between Korean and Chinese flukes. The karyotype of liver flukes from Korea consisted of three metacentric pairs, one meta-/submetacentric pair, 16 submetacentric pairs and eight subtelocentric pairs of chromosomes. On the other hand, liver flukes from China consisted of two metacentric pairs, two meta-/submetacentric pairs, 16 submetacentric pairs and eight subtelocentric pairs of chromosomes.