Microresonator mass sensors for detection of Bacillus anthracis Sterne spores in air and water

Towards the goal of developing a real-time monitoring device for microorganisms, we demonstrate the use of microcantilevers as resonant mass sensors for detection of Bacillus anthracis Sterne spores in air and liquid. The detection scheme was based on measuring resonant frequency decrease driven by thermally induced oscillations, as a result of the added mass of the spores with the use of a laser Doppler vibrometer (LDV). Viscous effects were investigated by comparing measurements in air and deionized (DI) water along with theoretical values. Moreover, biological experiments were performed which involved suspending spores onto the cantilevers and performing mass detection in air and water. For detection of spores in water, the cantilevers were functionalized with antibodies in order to fix the spores onto the surface. We demonstrate that as few as 50 spores on the cantilever can be detected in water using the thermal noise as excitation source. Measurement sensitivity of 9.23 Hz/fg for air and 0.1 Hz/fg for water were obtained. These measurements were compared with theoretical values and sources of improvement in cantilever sensitivity in a viscous medium were also discussed. It is expected that by driving the cantilevers and using higher order modes, detection of a single spore in liquids should be achievable.     

Supercritical carbon dioxide and hydrogen peroxide cause mild changes in spore structures associated with high killing rate of Bacillus anthracis

The present work examines chemical and structural response in B. anthracis spores killed by a mixture of supercritical carbon dioxide (SCCO₂) and hydrogen peroxide (H₂O₂). Deactivation of 6-log of B. anthracis spores by SCCO₂ + H₂O₂ was demonstrated, but changes in structure were observed in only a small portion of spores. Results from phase contrast microscopy proved that this treatment is mild and does not trigger germination-like changes. TEM imaging revealed mild damage in a portion of spores while the majority remained intact. Dipicolinic acid (DPA) analysis showed that < 10% of the DPA was released from the spore core into the external milieu, further demonstrating only modest damage to the spores. Confocal fluorescent microscopy, assessing uptake of DNA-binding dyes, directly demonstrated compromise of the permeability barrier. However, the magnitude of uptake was small compared to spores that had been autoclaved. This work suggests that SCCO₂ + H₂O₂ is quite mild compared to other sterilization methods, which has major implications in its application. These results provide some insight on the possible interactions between spores and the SCCO₂ + H₂O₂ sterilization process.     

Spin labelling of Bacillus anthracis endospores: a model for in vivo tracking by EPR imaging

Anthrax is caused by the gram-negative bacterium, Bacillus anthracis. Infection by this microbe results from delivery of the endospore form of the bacillus through direct contact, either topical or inhalation. With regard to the latter route of administration, it is proposed that endospores of B. anthracis enter the lungs and are phagocytized by host alveolar macrophages. Thereafter, it is unclear as to how endospores travel to distal loci and what tissues are the targets. Herein, this study describes the spin labelling of endospores through two different approaches with various aminoxyls. Indeed, after exposure to RAW 264.7 cells, these aminoxyl-containing endospores were phagocytized, as demonstrated by EPR spectroscopy of the infected macrophage, thus providing a potential tool for EPR imaging in animals.     

香蕉抗(感)病品种根系分泌物对枯萎病菌和枯草芽孢杆菌的生物效应

为明确香蕉根系分泌物对枯萎病菌及其生防枯草芽孢杆菌的生物效应,采用离位溶液培养法收集抗枯萎病香蕉品种(南天黄)和感枯萎病香蕉品种(桂蕉6号)的根系分泌物,研究根系分泌物对土壤微生物种群数量、香蕉枯萎病菌和枯草芽孢杆菌生长的影响。结果表明: 抗病品种根系分泌物能显著减少土壤真菌的数量,抑制枯萎病菌孢子的萌发;而感病品种根系分泌物能显著促进病菌菌丝生长和孢子的萌发,两个品种根系分泌物均能显著促进枯草芽孢杆菌的生长和生物膜形成。经抗(感)病香蕉品种根系分泌物处理,病菌菌丝生长速率分别为11.28和12.28 mm·d^-1,病菌孢子的萌发率分别为34.6%和79.5%;枯草芽孢杆菌培养12 h后菌体生长量的OD₆₀₀分别为1.27和1.14,生物膜形成量在静置培养72 h后OD₅₇₀分别达1.11和1.30,两个品种处理间的差异均达显著水平。枯草芽孢杆菌在香蕉感病品种根际中定殖的菌量显著高于抗病品种。通过对两个品种根系分泌物中可溶性总糖、游离氨基酸和有机酸的含量和组成分析,发现抗病品种根系分泌物中有机酸和游离氨基酸的含量明显高于感病品种,在各组成成分中,以乙酸和脯氨酸在抗(感)病香蕉品种根系分泌物中含量比值较高,分别达3.7和2.4倍。综上所述,抗病品种根系分泌物能抑制病菌生长,感病品种根系分泌物则会显著促进病菌生长,而两个品种根系分泌物均能显著促进枯草芽孢杆菌的生长和生物膜的形成。     

阔叶丰花草与2种菊科植物之间的化感作用

阔叶丰花草是一种适用于华南果园生草控草的一年生植物。为了揭示阔叶丰花草与果园常见杂草之间的竞争关系,研究了阔叶丰花草与两种菊科植物(胜红蓟和白花鬼针草)之间的化感作用。结果表明: 10～50 mg·mL^-1的阔叶丰花草水浸液处理显著抑制胜红蓟和白花鬼针草种子萌发和幼苗生长,胜红蓟和白花鬼针草的胚根长分别比对照降低57.4%～90.2%和57.3%～62.3%。胜红蓟和白花鬼针草水浸液对阔叶丰花草种子萌发也有较强的化感效应,在50 mg·mL^-1的浓度处理下,阔叶丰花草种子几乎不能萌发。经10 mg·mL^-1阔叶丰花草水浸液处理30 d后,胜红蓟播种苗的净光合作用、株高和生物量分别比对照降低15.2%、20.6%和41.5%,白花鬼针草播种苗的生物量也出现下降趋势;但胜红蓟和白花鬼针草水浸液处理对阔叶丰花草播种苗生长的影响均不显著。在混种条件下,阔叶丰花草的生物量与单种的水平相当,胜红蓟和白花鬼针草的生物量则分别比单种降低86.0%和27.1%。与胜红蓟和白花鬼针草相比,阔叶丰花草的化感优势在于除了能抑制对方的种子萌发,也能抑制其植株生长。     

On the presence of calmodulin-like protein in mycobacteria

Abstract Endogenous elemental sulfur (S⁰) has been studied in dormant spores and in spores in the early stages of germination, of Phomopsis viticola . S⁰ was measured by high-pressure liquid chromatography (HPLC). The rapid and almost total disappearance of endogenous S⁰ during the early stages of spore germination was directly related to a sharp increase of the respiratory activity and the ATP concentration. This was followed by the synthesis of DNA, RNA, proteins and lipids. Respiratory activity, S⁰ reduction and germination were inhibited in high concentrations of spores. Endogenous S⁰ disappearance, due to its reduction at the level of the mitochondrial respiratory chain with hydrogen sulfide production, may play a key role in the breaking of dormancy and the induction of germination in spores of P. viticola .     

巴茅草水浸提液对3种作物种子萌发及幼苗生长的化感作用

本文以发芽率、发芽速度指数、发芽指数、根长、茎长和生物量为种子萌发和幼苗生长参数,研究不同生长时期巴茅草叶片和茎秆水浸提液对白菜、生菜、水稻的化感作用。结果表明: 巴茅草叶水浸提液化感作用强于茎秆水浸提液,叶水浸提液处理后受体植物的发芽指数和生物量均显著低于茎水浸提液。枯萎期巴茅草的化感作用强于生长旺盛期。不同浓度巴茅草叶水浸提液对3种作物的化感作用存在明显的量效关系,浸提液浓度越高,巴茅草的化感抑制作用越强。巴茅草叶水浸提液对白菜和生菜各萌发指标100%抑制的浓度分别为0.075和0.10 g·mL^-1;而0.10 g·mL^-1巴茅草叶水浸提液对水稻发芽率、发芽速度指数、发芽指数的抑制率分别为13.8%、27.2%、19.3%。巴茅草叶水浸提液对白菜和生菜各生长指标100%抑制的浓度分别为0.05和0.10 g·mL^-1;而0.10 g·mL^-1巴茅草叶水浸提液对水稻根长、茎长、生物量的抑制率分别为64.6%、92.9%、21.8%。结合种子萌发和幼苗生长的综合化感指数,3种供试作物对巴茅草化感作用的敏感程度为白菜>生菜>水稻。     

Species relationships in Bulnesia as shown by seed protein electrophoresis

The seed proteins of seven species of Bulnesia were studied by polyacrylamide electrophoresis. Some of the bands are characteristic and constant “markers” of each species; these allow the unequivocal identification of their electrophoregrams. In total 84 different bands were identified. These were treated numerically by cluster analysis. There were no constant differences between geographic races of B. arborea from Colombia and Venezuela. The electrophoregram of B. carrapo shows differences with that of B. arborea giving support to the idea that both taxa are separate allopatric species. The species pair B. foliosa-B. schickendantzii present the most similar electrophoregrams; this determines a short taxonomic distance between them in the phenogram. The Prim network shows the supposedly more primitive species (B. arborea, B. carrapo and B. bonariensis) well separated from the more advanced group (B. schickendantzii, B. foliosa and B. retama). B. sarmientoi, however, appears as rather distant and unrelated from all other taxa. In general, the results from protein electrophoresis agree with results from a previous numerical study based on 43 morphological characters.     

Analysis of the Loss in Heat and Acid Resistance during Germination of Spores of Bacillus Species

A major event in the nutrient germination of spores of Bacillus species is release of the spores'' large depot of dipicolinic acid (DPA). This event is preceded by both commitment, in which spores continue through germination even if germinants are removed, and loss of spore heat resistance. The latter event is puzzling, since spore heat resistance is due largely to core water content, which does not change until DPA is released during germination. We now find that for spores of two Bacillus species, the early loss in heat resistance during germination is most likely due to release of committed spores'' DPA at temperatures not lethal for dormant spores. Loss in spore acid resistance during germination also paralleled commitment and was also associated with the release of DPA from committed spores at acid concentrations not lethal for dormant spores. These observations plus previous findings that DPA release during germination is preceded by a significant release of spore core cations suggest that there is a significant change in spore inner membrane permeability at commitment. Presumably, this altered membrane cannot retain DPA during heat or acid treatments innocuous for dormant spores, resulting in DPA-less spores that are rapidly killed.     

Precise molecular weight determination of PCR products of the rRNA intergenic spacer region using electrospray quadrupole mass spectrometry for differentiation of B. subtilis and B. atrophaeus, closely related species of bacilli

Assessment of 16S–23S rRNA intergenic spacer region (ISR) sequence variability is an important supplement to 16S rRNA sequencing for differentiating closely related bacterial species. Species differentiation can also be achieved by determination of approximate size of PCR (polymerase chain reaction) products of ISRs, based on their relative electrophoretic mobility on agarose gels. Closely-related species can have ISR PCR products that are similar in size. More precise molecular weight (M.W.) determination of these products might allow improved discrimination of such species. Electrospray quadrupole mass spectrometry (ESI-Q-MS) has the potential to provide such precision. For ESI-Q-MS analysis, size limitation of PCR products is currently limited to around 130 base pairs (bp). Bacillus subtilis and Bacillus atrophaeus are two closely related species with few distinguishing phenotypic characteristics. B. subtilis has recently been sub-divided into two subgroups, W23 (type strain, W23) and 168 (type strain, 168). PCR products amplified from the ISR including the 5′ terminal end of the 23S rRNA and a conserved portion of the ISR were analyzed by ESI-Q-MS. A 119 or 120 bp PCR product was produced for B. atrophaeus strains. However, strains of B. subtilis subgroups W23 and 168 each produced 114 bp products. In summary, a mass spectrometry method was developed for differentiation of B. subtilis and B. atrophaeus. Also, the genetic similarity of B. subtilis subgroups W23 and 168 was confirmed. Accurate determination of the molecular weight of PCR products from the 16S–23S rRNA intergenic spacer region using electrospray quadrupole mass spectrometry has great potential as a general technique for characterizing closely related bacterial species.     

Role for trehalase during germination of spores in the fission yeast Schizosaccharomyces pombe

Spores from Schizosaccharomyces pombe contain neutral and acid trehalases. When spores from strains disrupted for ntp1(+), which encodes neutral trehalase, were induced to germinate, the onset of the process was markedly delayed as compared to wild-type spores. Further outgrowth was also reduced. Dormant spores lacking neutral trehalase contained twice the amount of trehalose present in wild-type spores and mobilised the intracellular pool of trehalose at a slower rate during germination. Inhibition by phloridzin of the sporulation-specific acid trehalase in ntp1-disrupted spores arrested germination completely while prompting no effect on wild-type spores. These results suggest that the two trehalase enzymes may support the utilisation of trehalose during germination but neutral trehalase is required for a more rapid and efficient process.     

芳樟醇对灰葡萄孢生长的影响及对番茄灰霉病的防控效果

通过平板抑菌试验和孢子萌发试验研究了芳樟醇对灰葡萄孢的生长抑制作用,并通过盆栽试验进一步验证了芳樟醇对番茄灰霉病的防控效果。结果表明: 芳樟醇能够显著抑制灰葡萄孢菌丝的生长,半最大效应浓度(EC₅₀)值为0.581 mL·L^-1。孢子萌发试验中,芳樟醇能够有效抑制灰葡萄孢孢子的萌发,并表现出浓度依赖性。芳樟醇处理提高了灰葡萄孢菌菌丝体的相对电导率和丙二醛(MDA)含量,说明芳樟醇可引起氧化损伤效应导致灰葡萄孢菌的膜系统被破坏;芳樟醇处理后灰葡萄孢菌中的超氧化物歧化酶(SOD)、过氧化氢酶(CAT)、过氧化物酶(POD)活性较对照组分别下降了27.4%、68.9%和26.0%,说明芳樟醇抑制了灰葡萄孢菌体内的抗氧化系统。盆栽试验结果显示,芳樟醇处理的病斑直径较对照组显著降低;番茄叶片中的SOD、CAT、POD、多酚氧化酶和苯丙氨酸解氨酶活性均显著高于对照组;而MDA含量下降了41.5%,说明芳樟醇可减轻灰葡萄孢菌对番茄植株造成的氧化损伤以提高植物抗病性。综上,芳樟醇对灰葡萄孢的生长有显著抑制作用并对番茄灰霉病有较好的防治效果,研究结果可为开发新型植物源抑菌剂防控番茄灰霉病提供理论依据。     

Stability of the Gram Reaction

In the course of about 7000 examinations of Gram-positive aerobic bacteria, it was found that two distinct groups of Gram-positive organisms could be recognized. One group was illustrated by Micrococcus freudenreichii, the other by Bacillus anthracis. All individuals in a smear of the former remained positive even when the time of exposure to stain was greatly diminished and the time of exposure to decolorizer was greatly increased. Similar changes of technic when B. anthracis was used showed that about 70% of the individuals in a given smear became Gram-negative. The writer accordingly distinguishes between stable and unstable Gram-positive bacteria.     

Natural occurrence of Bacillus thuringiensis and Bacillus cereus in eukaryotic organisms: a case for symbiosis

Bacillus thuringiensis and Bacillus cereus, two members of the Bacillus cereus sensu lato group, are most noted for their virulence in, respectively, arthropods and mammals including humans. Because of their pathogenicity to insects in particular, and their narrow host range, strains of B. thuringiensis have been utilised successfully as biocontrol agents of insect pests. Whereas B. cereus is not an established entomopathogen, certain strains of this species are well known to be etiological agents of gastrointestinal and emetic syndromes in humans. While much is known about the taxonomic properties and molecular basis for virulence of B. thuringiensis and B. cereus, comparatively less is known about their ecology in natural environments. Thus, there are limited data regarding their resilience, i.e. recycling of vegetative and sporulated phases of growth in soil, ecolgical niches including symbiotic interactions with other organisms, and the impact on ecosystems in which they proliferate. Nevertheless, based on recent data, a picture is beginning to emerge that B. thuringiensis and B. cereus are capable of establishing mutual and commensal relationships with both animals and plants. In this regard, these bacilli can proliferate in the digestive tracts of animals, where upon defecation they form dormant spores in the soil, and to a lesser extent on the phylloplane and rhizospheres of plants. Altogether, current evidence strongly suggests that B. thuringiensis and B. cereus are capable of completing their life cycles and recycling through various reservoirs, including animals, plants, and soil. This review focuses on the current knowledge pertaining to the ecologic interactions between B. thuringiensis and B. cereus and eukaryotic hosts, with special emphasis on symbiosis.     

Serological diagnostic potential of recombinant outer membrane protein (Omp31) from Brucella melitensis in goat and sheep brucellosis

Outer membrane proteins of Brucella have been classified as group 1 (94 or 88 kDa), group 2 (36–38 kDa), and group 3 (31–34 and 25–27 kDa). Two proteins of 25 and 31 kDa with only 34% of identity are included in group 3 and they are coded for by the omp25 and omp31 genes. Proposed study planned to detect antibodies to Brucella melitensis Omp31 in farm goats having history of B. melitensis induced abortions, in B. melitensis-infected goats and sheep. By enzyme-linked immunosorbent assay (ELISA), using recombinant Omp31 as antigen, of 872 farm goats antibodies to Omp31 were detected in 112 (12.8%) cases. Out of 14 naturally infected goats infected with B. melitensis 12 (85.7%) showed anti Omp31 antibodies. Out of 10 naturally infected sheep with Brucella ovis, antibodies to Omp31 were detected only in 6 (60%) cases and in 18 (81.8%) out of 22 cases infected with B. melitensis. Obtained results were also compared with the rose Bengal plate test (RBPT). In controlled experiments, sensitivity and specificity of recombinant Omp31 (rOmp31) ELISA and RBPT were also evaluated and it was found that former test is 100% specific though RBPT has slightly higher sensitivity. In this study, we found a significant difference between the two groups (B. melitensis and B. ovis infected) in terms of the percentage of positive reactions or signal level by an ELISA. The reactivity of the positive sera against the purified rOmp31 was also tested by Western blotting. Sera from B. melitensis-infected animals showed a strong reactivity in comparison to sera from B. ovis-infected animals. The potential diagnostic usefulness of this antigen in combination with other recombinant proteins from B. melitensis would be of great importance in future in eradication of brucellosis.     

Expression of human dihydrofolate reductase cDNA and its induction by chloramphenicol in Bacillus subtilis

A bifunctional plasmid (pMP358) able to replicate and to express cloned human dihydrofolate reductase cDNA (cDHFR) in both Escherichia coli and Bacillus subtilis was constructed. The expression of cDHFR in B. subtilis was the result of a deletion that placed the cDNA fragment under the control of the chloramphenicol acetyltransferase (CAT) gene promoter of Staphylococcus aureus plasmid pC194. By sequence analysis of plasmid pMP358, we observed a gene fusion occurring between the cDHFR and the 32nd codon of the CAT gene. We report that such a “hybrid” gene is able to direct the synthesis of a 25-kDal “hybrid” protein, which was found to be inducible by supplementing B. subtilis cells with sublethal doses of chloramphenicol.     

Media and Fermentation Processes for the Rapid Production of High Concentrations of Stable Blastospores of the Bioinsecticidal Fungus Paecilomyces fumosoroseus

In shake flask and fermentor studies, various media components and culture inocula were tested to improve P. fumosoroseus spore production rates, yield and stability. To evaluate inoculum potential and inoculum scale-up for fermentor studies, conidia and liquid culture-produced spores of various strains of P. fumosoroseus were compared as inoculum. Inoculation of liquid cultures with blastospores at concentrations of at least 1×10⁶ spores mL^-1 resulted in the rapid production of high concentrations of blastospores (∼1×10⁹ spores mL^-1, 48 h fermentation time) for all strains tested. The rapid germination rate of blastospores (90% after 6 h incubation) compared to conidia (>90% after 16 h incubation) and the use of higher inoculum rates reduced the fermentation time from 96 to 48 h for maximal spore yields. A comparison of various complex nitrogen sources showed that liquid media supplemented with acid hydrolyzed casein or yeast extract supported the production of high concentrations of blastospores that were significantly more desiccation-tolerant (79-82% survival after drying) when compared to blastospores produced in media supplemented with other nitrogen sources (12-50% survival after drying). For rapid spore production, requirements for trace metals and vitamin supplementation were dependent on the type of hydrolyzed casein used in the medium. Fermentor studies with two strains of P. fumosoroseus showed that high concentrations (1.3-1.8×10⁹ spores mL^-1) of desiccation-tolerant blastospores could be produced in 48-h fermentations. These studies have demonstrated that the infective spores of various strains of the fungal bioinsecticide Paecilomyces fumosoroseus can be rapidly produced using deep-tank, liquid culture fermentation techniques.     

A high resolution four-locus multiplex single nucleotide repeat (SNR) genotyping system in Bacillus anthracis

The allelic identities of Single Nucleotide Repeat (SNR) markers in Bacillus anthracis are typically ascertained by DNA sequencing through the direct repeat. Here we describe a reproducible method for genotyping closely related isolates by using four SNR loci in a multiplex-PCR capillary electrophoresis system amenable to high-throughput analysis.     

The total ascorbic acid content and its variation with seasonal and nutritional factors in some common cirripedes

An investigation has been made of the ascorbic acid content, its seasonal changes, and the effect of starvation in several cirripedes. In Balanus balanoides (L.) and B. balanus (L.) there is an abrupt fall in ascorbic acid content which coincides with copulation. After fertilization values are low until the animals begin feeding again in March–April. Seasonal changes are not so clearly marked in Chthamalus spp.

60% of the ascorbic acid of Balanus balanoides is lost in the first month of starvation after which the rate of loss is reduced. In spite of different lengths of time for embryonic development 77% of the original ascorbic acid content of the eggs is lost in both B. balanoides and B. balanus.

Ascorbic acid has been demonstrated histologically in bodies of B. balanoides. Experiments with homogenates of isolated bodies, using additions of substrates and co-factors known to be required for in vitro synthesis, suggest very strongly that the tissues are incapable of synthesizing ascorbic acid unless at a very low level. Addition of the microsomal enzymes from a rabbit liver preparation to an homogenate with substrate and co-factors gave ascorbic acid synthesis. This suggests a “lesion” analogous to that found in other organisms known to be incapable of synthesizing ascorbic acid.     

Methods for Integrated Air Sampling and DNA Analysis for Detection of Airborne Fungal Spores

Integrated air sampling and PCR-based methods for detecting airborne fungal spores, using Penicillium roqueforti as a model fungus, are described. P. roqueforti spores were collected directly into Eppendorf tubes using a miniature cyclone-type air sampler. They were then suspended in 0.1% Nonidet P-40, and counted using microscopy. Serial dilutions of the spores were made. Three methods were used to produce DNA for PCR tests: adding untreated spores to PCRs, disrupting spores (fracturing of spore walls to release the contents) using Ballotini beads, and disrupting spores followed by DNA purification. Three P. roqueforti-specific assays were tested: single-step PCR, nested PCR, and PCR followed by Southern blotting and probing. Disrupting the spores was found to be essential for achieving maximum sensitivity of the assay. Adding untreated spores to the PCR did allow the detection of P. roqueforti, but this was never achieved when fewer than 1,000 spores were added to the PCR. By disrupting the spores, with or without subsequent DNA purification, it was possible to detect DNA from a single spore. When known quantities of P. roqueforti spores were added to air samples consisting of high concentrations of unidentified fungal spores, pollen, and dust, detection sensitivity was reduced. P. roqueforti DNA could not be detected using untreated or disrupted spore suspensions added to the PCRs. However, using purified DNA, it was possible to detect 10 P. roqueforti spores in a background of 4,500 other spores. For all DNA extraction methods, nested PCR was more sensitive than single-step PCR or PCR followed by Southern blotting.