Community patterns of the small riverine benthos within and between two contrasting glacier catchments

Ongoing glacial retreat is expected to lead to numerous changes in glacier‐fed rivers. This study documents the development of community composition of the hitherto widely neglected micro‐ and meiobenthos (MMB: bacteria, fungi, algae, protists, and meiofauna) in glacier rivers in response to the distinct habitat conditions driven by different stages of (de)glacierization. Our model is based on the glacier catchments of the Möll River (MC) and Kleinelendbach stream (KC), in the Austrian Alps, with 60% and 25% glacierization and glacier retreats of 403 and 26 m, respectively, since 1998. Analyses of overall catchment diversity and resemblance patterns showed that neither intense glacierization nor rapid deglacierization were predominant MMB determinants. This was ascribed to the specific environmental conditions at the MC, where the rapidly retreating Pasterze glacier has formed a harsh unstable proglacial, but also a benign floodplain area, with the former suppressing and the latter supporting the structural development of the MMB. Comparisons of similarly aged riverine habitats of the MC proglacial and the KC main channel further evidenced developmental suppression of the MMB (64 taxa) by the rapidly retreating MC glacier, unlike the moderate glacial retreat in the KC (130 taxa). Habitat conditions interacting with melt periods explained the differences in MMB resemblance patterns, which themselves differentially reflected the spatiotemporal habitat settings imposed by the different glacier activities. The varying glacial influences were represented by a glaciality index (GIm) based on water temperature, electrical conductivity, and stream bed stability. The taxonomic richness of nematodes, rotifers, algae, and diatoms was distinctly related to this index, as were most MMB abundances. However, the strongest relationships to the GIm were those of nematode abundances and maturity. Our observations highlight the intense response of the MMB to ongoing glacier retreat and the utility of a simple index to reveal such patterns.     

Phylogeography of the pantropical sea urchin Tripneustes: contrasting patterns of population structure between oceans

To understand how allopatric speciation proceeds, we need information on barriers to gene flow, their antiquity, and their efficacy. For marine organisms with planktonic larvae, much of this information can only be obtained through the determination of divergence between populations. We evaluated the importance of ocean barriers by studying the mitochondrial DNA phylogeography of Tripneustes, a pantropical genus of shallow water sea urchin. A region of cytochrome oxidase I (COI) was sequenced in 187 individuals from locations around the globe. The COI phylogeny agreed with a previously published phylogeny of bindin that barriers important to the evolution of Tripneustes are: (1) the cold water upwelling close to the tip of South Africa, (2) the Isthmus of Panama, (3) the long stretch of deep water separating the eastern from the western Atlantic, and (4) the freshwater plume of the Orinoco and the Amazon rivers between the Caribbean and the coast of Brazil. These barriers have previously been shown to be important in at least a subset of the shallow water marine organisms in which phylogeography has been studied. In contrast, the Eastern Pacific Barrier, 5000 km of deep water between the central and the eastern Pacific that has caused the deepest splits in other genera of sea urchins, is remarkably unimportant as a cause of genetic subdivision in Tripneustes. There is also no discernible subdivision between the Pacific and Indian Ocean populations of this genus. The most common COI haplotype is found in the eastern, central, and western Pacific as well as the Indian Ocean. Morphology, COI, and bindin data agree that T. depressus from the eastern Pacific and T. gratilla from the western Pacific are, in fact, the same species. The distribution of haplotype differences in the Indo-Pacific exhibits characteristics expected from a sea urchin genus with ephemeral local populations, but with high fecundity, dispersal, and growth: there is little phylogenetic structure, and mismatch distributions conform to models of recent population expansion on a nearly global scale. Yet, comparisons between local populations produce large and significant F(ST) values, indicating nonrandom haplotype distribution. This apparent local differentiation is only weakly reflected in regional divergence, and there is no evidence of isolation by distance in correlations between F(ST) values and either geographical or current distance. Thus, Tripneustes in the Indo-Pacific (but not in the Atlantic) seems to be one large metapopulation spanning two oceans and containing chaotic, nonequilibrium local variation, produced by the haphazard arrival of larvae or by unpredictable local extinction.     

Hydroseral development in southern Ontario: patterns and controls

Palaeoecological data from a range of wetland types were synthesized in order to study the development of wetland ecosystems in southern Ontario. The present-day nature of the wetland system occurring in a topographically defined basin was shown to be controlled in part by basin morphology. Stratigraphic and vegetational (pollen and macrofossil analysis) data were used to compare the sequence of communities occupying basins during the postglacial. In systems where terrestrial peat overlies lake sediment, the broad stages of development were relatively uniform (from a lake to a shallow open water wetland to a herbaceous marsh or fen to a woody plant-dominated community), although the exact nature of each stage varied widely between basins. The accumulation rate of sediment within such basins varied by up to two orders of magnitude during the postglacial. Allogenic and autogenic factors have been acting on these systems throughout the postglacial, and the sensitivity of individual sites to changes in these environmental conditions will also have varied. Even the widespread land clearance associated with European settlement in the area in recent centuries has not affected some wetland systems detectably, while others have either been destroyed or profoundly changed. The patterns of hydroseral development, both timing and direction, were compared with known regional environmental changes.     

Life history patterns of a livebearing fish in contrasting environments

Summary The population dynamics and energy allocations of the Gila topminnow, a small livebearing fish, were studied in two contrasting environments, a spring run of constant characteristics and a fluctuating desert wash. Topminnows grew and matured in two basic patterns. First, many fish in both areas matured the year after their birth. Second, spring fish born early in the breeding season grew rapidly, bred within five months, and died by eight months of age. Although spring fish assimilated more energy, wash fish actually expended more calories for growth and reproduction, partly because of lower maintenance costs. Reproductive effort of long-lived spring fish varied with age between 3.1 and 6.5%; whereas efforts of short-lived spring and wash fish increased steadily with age to 5.2 and 9.8%, respectively. Although spring fish produced eggs of higher energy content, females in both areas varied their investment per offspring, apparently tracking seasonal changes in the availability of food for fry. When long-lived spring fish experienced food shortage, they allocated less energy to both growth and reproduction; in contrast, wash and short-lived spring fish under similar conditions reduced only their growth allocation. The reproductive mass in spring fish appeared to be limited by food availability, incompletely filled the abdominal space, and reflected no tradeoff between fecundity and investment per offspring. Reproduction by wash fish appeared to be limited by body space and was characterized by a tradeoff between fecundity and egg size.     

Biophysical controls on cluster dynamics and architectural differentiation of microbial biofilms in contrasting flow environments

Ecology, with a traditional focus on plants and animals, seeks to understand the mechanisms underlying structure and dynamics of communities. In microbial ecology, the focus is changing from planktonic communities to attached biofilms that dominate microbial life in numerous systems. Therefore, interest in the structure and function of biofilms is on the rise. Biofilms can form reproducible physical structures (i.e. architecture) at the millimetre‐scale, which are central to their functioning. However, the spatial dynamics of the clusters conferring physical structure to biofilms remains often elusive. By experimenting with complex microbial communities forming biofilms in contrasting hydrodynamic microenvironments in stream mesocosms, we show that morphogenesis results in ‘ripple‐like’ and ‘star‐like’ architectures – as they have also been reported from monospecies bacterial biofilms, for instance. To explore the potential contribution of demographic processes to these architectures, we propose a size‐structured population model to simulate the dynamics of biofilm growth and cluster size distribution. Our findings establish that basic physical and demographic processes are key forces that shape apparently universal biofilm architectures as they occur in diverse microbial but also in single‐species bacterial biofilms.     

Zooplankton spatial patterns in two lakes with contrasting fish community structure

Horizontal and temporal patterns in crustacean zooplankton communities were analyzed in two small, oligotrophic lakes which were morphologically and chemically similar, but had contrasting fish communities. Ranger Lake was dominated by two bass species and the planktivores numbered < 25 ind. ha^–1. Mouse Lake had no large piscivores and planktivores numbered > 1200 ind. ha^–1. There were significant differences in the distribution of zooplankton taxa and size classes between sampling stations. In Ranger Lake, the smallest size classes were more abundant at the deeper stations and the larger individuals were more abundant at the shallower stations. In Mouse Lake, the smaller individuals were more common at the shallow stations and the larger individuals were more common at the deeper stations. These differences suggest medium scale patterns induced by vectorial forces, but modified by species specific migration patterns. We tested the hypothesis that horizontal heterogeneity should be influenced by planktivore density and found that none of the taxa showed significant between-lake differences in the variance-mean regressions. We also tested the hypothesis that larger taxa should be more heterogeneous and we found that cladocerans were more heterogeneous than copepods and nauplii. In terms of sampling methodology our data suggest that the between-station variability was so high that a single mid-lake sample would certainly lead to completely unacceptable errors in the estimation of population densities and biomasses.     

Relationships between structure and function in streams contrasting in temperature

1. We studied 10 first-order Icelandic streams differing in geothermal influence in separate catchments. Summer temperature (August–September) ranged between 6 and 23 °C.
2. Macroinvertebrate evenness and species overlap decreased significantly with temperature whereas taxon richness showed no response. In total, 35 macroinvertebrate species were found with Chironomidae the dominant taxonomic group. Macroinvertebrate density increased significantly with temperature. Dominant species in the warm streams were Lymnaea peregra and Simulium vittatum . Algal biomass, macrophyte cover and richness were unrelated to temperature. Densities of trout ( Salmo trutta ), the only fish species present, reflected habitat conditions and to a lesser degree temperature.
3. Density of filter-feeders increased significantly with temperature whereas scraper density, the other dominant functional feeding group, was unrelated to temperature. Stable isotope analysis revealed a positive relationship between δ¹⁵N and temperature across several trophic levels. No pattern was found with regard to δ¹³C and temperature.
4. Leaf litter decomposition in both fine and coarse mesh leaf bags were significantly correlated to temperature. In coarse mesh leaf packs breakdown rates were almost doubled compared with fine mesh, ranging between 0.5 and 1.3 g DW 28 days⁻¹. Nutrient diffusion substrates showed that the streams were primarily nitrogen limited across the temperature gradient while a significant additional effect of phosphorous was found with increasing temperature.
5. Structural and functional attributes gave complementary information which all indicated a change with temperature similar to what is found in moderately polluted streams. Our results therefore suggest that lotic ecosystems could be degraded by global warming.     

Biotic and abiotic controls on the ecosystem significance of consumer excretion in two contrasting tropical streams

1. Excretion of nitrogen (N) and phosphorus (P) is a direct and potentially important role for aquatic consumers in nutrient cycling that has recently garnered increased attention. The ecosystem‐level significance of excreted nutrients depends on a suite of abiotic and biotic factors, however, and few studies have coupled measurements of excretion with consideration of its likely importance for whole‐system nutrient fluxes. 2. We measured rates and ratios of N and P excretion by shrimps (Xiphocaris elongata and Atya spp.) in two tropical streams that differed strongly in shrimp biomass because a waterfall excluded predatory fish from one site. We also made measurements of shrimp and basal resource carbon (C), N and P content and estimated shrimp densities and ecosystem‐level N and P excretion and uptake. Finally, we used a 3‐year record of discharge and NH₄‐N concentration in the high‐biomass stream to estimate temporal variation in the distance required for excretion to turn over the ambient NH₄‐N pool. 3. Per cent C, N, and P body content of Xiphocaris was significantly higher than that of Atya. Only per cent P body content showed significant negative relationships with body mass. C:N of Atya increased significantly with body mass and was higher than that of Xiphocaris. N : P of Xiphocaris was significantly higher than that of Atya. 4. Excretion rates ranged from 0.16–3.80 μmol NH₄‐N shrimp^?1 h^?1, 0.23–5.76 μmol total dissolved nitrogen (TDN) shrimp^?1 h^?1 and 0.002–0.186 μmol total dissolved phosphorus (TDP) shrimp^?1 h^?1. Body size was generally a strong predictor of excretion rates in both taxa, differing between Xiphocaris and Atya for TDP but not NH₄‐N and TDN. Excretion rates showed statistically significant but weak relationships with body content stoichiometry. 5. Large between‐stream differences in shrimp biomass drove differences in total excretion by the two shrimp communities (22.3 versus 0.20 μmol NH₄‐N m^?2 h^?1, 37.5 versus 0.26 μmol TDN m^?2 h^?1 and 1.1 versus 0.015 μmol TDP m^?2 h^?1), equivalent to 21% and 0.5% of NH₄‐N uptake and 5% and <0.1% of P uptake measured in the high‐ and low‐biomass stream, respectively. Distances required for excretion to turn over the ambient NH₄‐N pool varied more than a hundredfold over the 3‐year record in the high‐shrimp stream, driven by variability in discharge and NH₄‐N concentration. 6. Our results underscore the importance of both biotic and abiotic factors in controlling consumer excretion and its significance for nutrient cycling in aquatic ecosystems. Differences in community‐level excretion rates were related to spatial patterns in shrimp biomass dictated by geomorphology and the presence of predators. Abiotic factors also had important effects through temporal patterns in discharge and nutrient concentrations. Future excretion studies that focus on nutrient cycling should consider both biotic and abiotic factors in assessing the significance of consumer excretion in aquatic ecosystems.     

Weak correlation between predictive power of individual sequence patterns and overall prediction accuracy in proteins

Patterns in amino acid properties (polar, hydrophobic, etc.) that characterize secondary structure motifs are derived from a database containing 75 protein structures, with the aim of circumventing the limitations due to data base size so as to increase structure prediction score. Many such sequence-structure associations with high intrinsic predictive power are found, which turn out to be correct 78% of the time when applied individually to proteins outside the learning set. Based on these associations, a prediction method is developed, which reaches the score of 62% on the 3 states alpha-helix, beta-strand, and loop, without using additional constraints. Though this score is quite good compared to that of other available prediction methods, it is much lower than could be expected from the high intrinsic predictive power of the associations used. The reasons underlying this surprising result, which indicate that prediction score and intrinsic predictive power are only weakly coupled, are discussed. It is also shown that the size of the present database still seriously limits prediction scores, even when property patterns are used, and that higher scores are expected in large databases. Clues are provided on the relative influence of neglecting spatial interactions on prediction efficiency, suggesting that, in sufficiently large databases, predicted secondary structures would correspond to those formed early in the folding process. This hypothesis is tested by confronting present predictions with available experimental data on early protein folding intermediates and on small peptides that adopt a relatively stable conformation in water. Although admittedly there are still too few such data, results suggest that the hypothesis might be well founded.     

Rapid courtship evolution in grouse (Tetraonidae): contrasting patterns of acceleration between the Eurasian and North American polygynous clades

Sexual selection is thought to be a powerful diversifying force, based on large ornamental differences between sexually dimorphic species. This assumes that unornamented phenotypes represent evolution without sexual selection. If sexual selection is more powerful than other forms of selection, then two effects would be: rapid divergence of sexually selected traits and a correlation between these divergence rates and variance in mating success in the ornamented sex. I tested for these effects in grouse (Tetraonidae). For three species pairs, within and among polygynous clades, male courtship characters had significantly greater divergence than other characters. This was most pronounced for two species in Tympanuchus. In the Eurasian polygynous clade, relative courtship divergence gradually increased with nucleotide divergence, suggesting a less dramatic acceleration. Increase in relative courtship divergence was associated with mating systems having higher variance in male mating success. These results suggest that sexual selection has accelerated courtship evolution among grouse, although the microevolutionary details appear to vary among clades.     

Phytoplankton distribution and its ecological and hydrographic controls in two contrasting areas of a stratified oligotrophic system

Hydrobiologia - In order to analyse the relationship between oceanographic factors and the distribution of marine phytoplankton in oligotrophic conditions, an oceanographic cruise was carried out...     

Regional patterns and controls of leaf decomposition in Australian tropical rainforests

Future climates have the potential to alter decomposition rates in tropical forest with implications for carbon emissions, nutrient cycling and retention of standing litter. However, our ability to predict impacts, particularly for seasonally wet forests in the old world, is limited by a paucity of data, a limited understanding of the relative importance of different aspects of climate and the extent to which decomposition rates are constrained by factors other than climate (e.g. soil, vegetation composition). We used the litterbag method to determine leaf litter decay rates at 18 sites distributed throughout the Australian wet tropics bioregion over a 14‐month period. Specifically, we investigated regional controls on litter decay including climate, soil and litter chemical quality. We used both in situ litter collected from litterfall on site and a standardized control leaf litter substrate. The control litter removed the effect of litter chemical quality and the in situ study quantified decomposition specific to the site. Decomposition was generally slower than for other tropical rainforests globally except in our wet and nutrient‐richer sites. This is most likely attributable to the higher latitude, often highly seasonal rainfall and very poor soils in our system. Decomposition rates were best explained by a combination of climate, soil and litter quality. For in situ litter (native to the site) this included: average leaf wetness in the dry season (LWDS; i.e. moisture condensation) and the initial P content of the leaves, or LWDS and initial C. For control litter (no litter quality effect) this included: rainfall seasonality (% dry season days with 0‐mm rainfall), soil P and mean annual temperature. These results suggest that the impact of climate change on decomposition rates within Australian tropical rainforests will be critically dependent on the trajectory of dry season moisture inputs over the coming decades.     

Different aspects of plant diversity show contrasting patterns in Carpathian forest openings

It has long been known that α- and β-diversity are driven by different ecological processes. Recently, several theoretical papers have suggested that β-diversity can be expressed in many different ways, and that these measures might have different meanings and behaviours. In terms of ecological understanding, it is important to test how these diversity measures behave in different settings, yet this has been rarely attempted. We investigated this question using forest openings in the Trasc?u Mountains, Romania, which contain species from grasslands of high nature value. The sampling was conducted in 40 openings, using edge-to-interior transects composed of 1-m² plots (α-diversity), from which we calculated five β-diversity measures at transect level. As predictor variables, we used canopy openness (from hemispherical photos), tree litter cover, heat load index, altitude, and bedrock type for α-diversity, and the means and ranges of these for β-diversity. Generalized linear mixed models showed that α-diversity was mostly explained by the first two variables. Amongst the β-diversity measures, the classical additive and multiplicative measures differed, the latter being similar to the Sørensen-based multiple-site dissimilarity. None of the predictors explained the slope of distance decay or Simpson-based multiple-site dissimilarity, except when considering ecological subsets of the species. We discuss the possible ecological processes underlying the different results, and the implication of our findings for nature conservation in the region. In conclusion, we support the joint application of different measures of α- and β-diversity, as long as their particular properties are taken into account.     

Geographical patterns of genetic structure in marine species with contrasting life histories

Aim  Phylogeographical breaks may reflect historical or present-day impediments to gene flow, and the congruence of these breaks across multiple species lends insight into evolutionary history and connectivity among populations. In marine systems, examining the concordance of phylogeographical breaks is challenging due to the varied sampling scales in population genetics studies and the diverse life histories of marine organisms. A quantitative approach that considers the effects of sampling scale and species life history is needed.
Location  The south-east and south-west coasts of the United States.
Methods  We quantitatively analysed previously published datasets of marine fauna to look for concordance among phylogeographical breaks. We used a bootstrap approach to determine the regions where phylogeographical breaks are more common than expected by chance among species with planktonic dispersal as well as those with restricted dispersal.
Results  On the south-west coast, breaks were clustered near Point Conception among planktonic dispersers and near Los Angeles among restricted dispersers. On the south-east coast, breaks were most common near the southern tip of Florida for planktonic dispersers and near Cape Canaveral for restricted dispersers.
Main conclusions  Dispersal ability is an important determinant of phylogeographical patterns in marine species. Breaks among planktonic dispersers on both coasts are congruent with present-day flow-mediated barriers to dispersal, suggesting that phylogeographical structure in species with planktonic larvae may reflect contemporary oceanography, while breaks in restricted dispersers reflect historical processes. These results highlight the importance of explicitly considering sampling scale and life history when evaluating phylogeographical patterns.     

Nutrient and chlorophyll a temporal patterns in eutrophic mountain ponds with contrasting macrophyte coverage

Hydrobiologia - In shallow lakes, macrophytes have important effects on food webs, community structure and nutrient dynamics. For this reason they play a significant role in the restoration of...