Hydrodynamic flow-mediated protein sorting on the cell surface of trypanosomes

The unicellular parasite Trypanosoma brucei rapidly removes host-derived immunoglobulin (Ig) from its cell surface, which is dominated by a single type of glycosylphosphatidylinositol-anchored variant surface glycoprotein (VSG). We have determined the mechanism of antibody clearance and found that Ig-VSG immune complexes are passively sorted to the posterior cell pole, where they are endocytosed. The backward movement of immune complexes requires forward cellular motility but is independent of endocytosis and of actin function. We suggest that the hydrodynamic flow acting on swimming trypanosomes causes directional movement of Ig-VSG immune complexes in the plane of the plasma membrane, that is, immunoglobulins attached to VSG function as molecular sails. Protein sorting by hydrodynamic forces helps to protect trypanosomes against complement-mediated immune destruction in culture and possibly in infected mammals but likewise may be of functional significance at the surface of other cell types such as epithelial cells lining blood vessels.     

趋流行为下斑马鱼幼鱼的全脑成像

目的 趋流,意即在水中调整身体方向并逆流而上的能力,是一种在大多数鱼类与两栖类动物中存在的保守行为。虽然关于趋流的研究已有一段很长的历史,并且近年来斑马鱼幼鱼趋流行为的理论机制也被提出,但是分布式的神经环路是如何整合多感知信息、做出决策、并实现行为控制仍然是个未知数。对自由运动的斑马鱼进行全脑神经活动成像为理解这一困难的问题提供了特殊的机会。方法 本文开发了一种微流控装置精确控制环境水流并激发斑马鱼的趋流行为。将该微流控芯片与扩增视野光场显微镜以及追踪系统整合,从而记录自由行为下斑马鱼全脑的神经活动。结果 在整合的微流控装置中稳定观察到了斑马鱼在水流中保持自身位置不变、逆流而上等刻板的趋流行为现象。与此同时,实现了对斑马鱼幼鱼趋流行为过程中的全脑钙活动记录。本文初步发现了几个脑区的神经活动与趋流行为相关。结论 本研究第一次展示了在斑马鱼幼鱼趋流行为的同时记录全脑神经活动的技术。接下来对神经活动和行为数据的分析与建模将有助于更好地理解一种重要自然行为背后的感觉运动转换机制。     

不同流速下杂交鲟幼鱼游泳状态与活动代谢研究

为研究水流速度对杂交鲟幼鱼行为和代谢的影响,探讨游泳状态与活动代谢及相关游泳运动参数之间的关系,在26℃水温下,使用特制的鱼类游泳行为和活动代谢同步测定装置,测定了杂交鲟幼鱼在0.1、0.3、0.5 m/s三种流速和静水条件下的游泳状态、趋流率、摆尾频率和耗氧率。结果表明:随着流速的增大,杂交鲟幼鱼逆流前进和逆流静止游泳状态所占时间比例显著减少,而逆流后退所占时间比例显著增加,顺流而下时间比例有所上升。在0.0—0.3 m/s的流速范围内,杂交鲟幼鱼各个时段的平均趋流率、摆尾频率和耗氧率均随着流速的增加而增大,在0.3 m/s流速下分别达到100%﹑(2.53±0.34)Hz和(490.99±164.59)mg O2/(kg.h)。当流速增加至0.5 m/s时,在趋流率仍保持100%的情况下,其耗氧率相比0.3 m/s增加了21.86%,而摆尾频率却减小了6.70%。实验过程杂交鲟幼鱼趋流率与摆尾频率呈显著线性正相关,而摆尾频率与耗氧率在大部分时段却无相关性。随着时间的延长,各流速组杂交鲟幼鱼趋流率、摆尾频率和耗氧率呈现不同的变化趋势,其趋流率均相对稳定;但摆尾频率均随时间延长呈下降趋势,而耗氧率则在实验前9h随时间延长逐渐增加,随后趋于稳定。研究结果提示:杂交鲟幼鱼游泳状态的变化与流速有关,而反映运动强度大小的摆尾频率与活动代谢率的关系受到游泳状态的显著影响,同时也与运动代谢特征的时间变化有关。       

Zebrafish larvae exhibit rheotaxis and can escape a continuous suction source using their lateral line

Zebrafish larvae show a robust behavior called rheotaxis, whereby they use their lateral line system to orient upstream in the presence of a steady current. At 5 days post fertilization, rheotactic larvae can detect and initiate a swimming burst away from a continuous point-source of suction. Burst distance and velocity increase when fish initiate bursts closer to the suction source where flow velocity is higher. We suggest that either the magnitude of the burst reflects the initial flow stimulus, or fish may continually sense flow during the burst to determine where to stop. By removing specific neuromasts of the posterior lateral line along the body, we show how the location and number of flow sensors play a role in detecting a continuous suction source. We show that the burst response critically depends on the presence of neuromasts on the tail. Flow information relayed by neuromasts appears to be involved in the selection of appropriate behavioral responses. We hypothesize that caudally located neuromasts may be preferentially connected to fast swimming spinal motor networks while rostrally located neuromasts are connected to slow swimming motor networks at an early age.     

Bacterial swimming strategies and turbulence

Most bacteria in the ocean can be motile. Chemotaxis allows bacteria to detect nutrient gradients, and hence motility is believed to serve as a method of approaching sources of food. This picture is well established in a stagnant environment. In the ocean a shear microenvironment is associated with turbulence. This shear flow prevents clustering of bacteria around local nutrient sources if they swim in the commonly assumed "run-and-tumble" strategy. Recent observations, however, indicate a "back-and-forth" swimming behavior for marine bacteria. In a theoretical study we compare the two bacterial swimming strategies in a realistic ocean environment. The "back-and-forth" strategy is found to enable the bacteria to stay close to a nutrient source even under high shear. Furthermore, rotational diffusion driven by thermal noise can significantly enhance the efficiency of this strategy. The superiority of the "back-and-forth" strategy suggests that bacterial motility has a control function rather than an approach function under turbulent conditions.     

Helical swimming can provide robust upwards transport for gravitactic single-cell algae; a mechanistic model

In still fluid, many phytoplankton swim in helical paths with an average upwards motion. A new mechanistic model for gravitactic algae subject to an intrinsic torque is developed here, based on Heterosigma akashiwo, which results in upwards helical trajectories in still fluid. The resultant upwards swimming speed is calculated as a function of the gravitactic and intrinsic torques. Helical swimmers have a reduced upwards speed in still fluid compared to cells which swim straight upwards. However a novel result is obtained when the effect of fluid shear is considered. For intermediate values of shear and intrinsic torque, a new stable equilibrium solution for swimming direction is obtained for helical swimmers. This results in positive upwards transport in vertical shear flow, in contrast to the stable equilibrium solution for straight swimmers which results in downwards transport in vertical shear flow. Furthermore, for strong intrinsic torque, when there is no longer a stable orientation equilibrium, we show that the average downwards transport of helical swimmers in vertical shear flow is greatly suppressed compared to straight swimmers. We hypothesise that helical swimming provides robustness for upwards transport in the presence of fluid shearing motions.     

Receptor-mediated binding of IgE-sensitized rat basophilic leukemia cells to antigen-coated substrates under hydrodynamic flow.

The physiological function of many cells is dependent on their ability to adhere via receptors to ligand-coated surfaces under fluid flow. We have developed a model experimental system to measure cell adhesion as a function of cell and surface chemistry and fluid flow. Using a parallel-plate flow chamber, we measured the binding of rat basophilic leukemia cells preincubated with anti-dinitrophenol IgE antibody to polyacrylamide gels covalently derivatized with 2,4-dinitrophenol. The rat basophilic leukemia cells' binding behavior is binary: cells are either adherent or continue to travel at their hydrodynamic velocity, and the transition between these two states is abrupt. The spatial location of adherent cells shows cells can adhere many cell diameters down the length of the gel, suggesting that adhesion is a probabilistic process. The majority of experiments were performed in the excess ligand limit in which adhesion depends strongly on the number of receptors but weakly on ligand density. Only 5-fold changes in IgE surface density or in shear rate were necessary to change adhesion from complete to indistinguishable from negative control. Adhesion showed a hyperbolic dependence on shear rate. By performing experiments with two IgE-antigen configurations in which the kinetic rates of receptor-ligand binding are different, we demonstrate that the forward rate of reaction of the receptor-ligand pair is more important than its thermodynamic affinity in the regulation of binding under hydrodynamic flow. In fact, adhesion increases with increasing receptor-ligand reaction rate or decreasing shear rate, and scales with a single dimensionless parameter which compares the relative rates of reaction to fluid shear.     

“Going with the Flow” or Not: Evidence of Positive Rheotaxis in Oceanic Juvenile Loggerhead Turtles (Caretta caretta) in the South Pacific Ocean Using Satellite Tags and Ocean Circulation Data

The movement of juvenile loggerhead turtles (n = 42) out-fitted with satellite tags and released in oceanic waters off New Caledonia was examined and compared with ocean circulation data. Merging of the daily turtle movement data with drifter buoy movements, OSCAR (Ocean Surface Current Analyses - Real time) circulation data, and three different vertical strata (0–5 m, 0–40 m, 0–100 m) of HYCOM (HYbrid Coordinate Ocean Model) circulation data indicated the turtles were swimming against the prevailing current in a statistically significant pattern. This was not an artifact of prevailing directions of current and swimming, nor was it an artifact of frictional slippage. Generalized additive modeling was used to decompose the pattern of swimming into spatial and temporal components. The findings are indicative of a positive rheotaxis whereby an organism is able to detect the current flow and orient itself to swim into the current flow direction or otherwise slow down its movement. Potential mechanisms for the means and adaptive significance of rheotaxis in oceanic juvenile loggerhead turtles are discussed.     

The Orientation of Swimming Biflagellates in Shear Flows

Biflagellated algae swim in mean directions that are governed by their environments. For example, many algae can swim upward on average (gravitaxis) and toward downwelling fluid (gyrotaxis) via a variety of mechanisms. Accumulations of cells within the fluid can induce hydrodynamic instabilities leading to patterns and flow, termed bioconvection, which may be of particular relevance to algal bioreactors and plankton dynamics. Furthermore, knowledge of the behavior of an individual swimming cell subject to imposed flow is prerequisite to a full understanding of the scaled-up bulk behavior and population dynamics of cells in oceans and lakes; swimming behavior and patchiness will impact opportunities for interactions, which are at the heart of population models. Hence, better estimates of population level parameters necessitate a detailed understanding of cell swimming bias. Using the method of regularized Stokeslets, numerical computations are developed to investigate the swimming behavior of and fluid flow around gyrotactic prolate spheroidal biflagellates with five distinct flagellar beats. In particular, we explore cell reorientation mechanisms associated with bottom-heaviness and sedimentation and find that they are commensurate and complementary. Furthermore, using an experimentally measured flagellar beat for Chlamydomonas reinhardtii, we reveal that the effective cell eccentricity of the swimming cell is much smaller than for the inanimate body alone, suggesting that the cells may be modeled satisfactorily as self-propelled spheres. Finally, we propose a method to estimate the effective cell eccentricity of any biflagellate when flagellar beat images are obtained haphazardly.     

Design of a side-view particle imaging velocimetry flow system for cell-substrate adhesion studies

Experimental models that mimic the flow conditions in microcapillaries have suggested that the local shear stresses and shear rates can mediate tumor cell and leukocyte arrest on the endothelium and subsequent sustained adhesion. However, further investigation has been limited by the lack of experimental models that allow quantitative measurement of the hydrodynamic environment over adherent cells. The purpose of this study was to develop a system capable of acquiring quantitative flow profiles over adherent cells. By combining the techniques of side-view imaging and particle image velocimetry (PIV), an in vitro model was constructed that is capable of obtaining quantitative flow data over cells adhering to the endothelium. The velocity over an adherent leukocyte was measured and the shear rate was calculated under low and high upstream wall shear. The microcapillary channel was modeled using computational fluid dynamics (CFD) and the calculated velocity profiles over cells under the low and high shear rates were compared to experimental results. The drag force applied to each cell by the fluid was then computed. This system provides a means for future study of the forces underlying adhesion by permitting characterization of the local hydrodynamic conditions over adherent cells.     

Rheotaxis in larval zebrafish is mediated by lateral line mechanosensory hair cells

The lateral line sensory system, found in fish and amphibians, is used in prey detection, predator avoidance and schooling behavior. This system includes cell clusters, called superficial neuromasts, located on the surface of head and trunk of developing larvae. Mechanosensory hair cells in the center of each neuromast respond to disturbances in the water and convey information to the brain via the lateral line ganglia. The convenient location of mechanosensory hair cells on the body surface has made the lateral line a valuable system in which to study hair cell damage and regeneration. One way to measure hair cell survival and recovery is to assay behaviors that depend on their function. We built a system in which orientation against constant water flow, positive rheotaxis, can be quantitatively assessed. We found that zebrafish larvae perform positive rheotaxis and that, similar to adult fish, larvae use both visual and lateral line input to perform this behavior. Disruption or damage of hair cells in the absence of vision leads to a marked decrease in rheotaxis that recovers upon hair cell repair or regeneration.     

Effects of temperature on larval fish swimming performance: the importance of physics to physiology

Temperature influences both the physiology offish larvae and the physics of the flow conditions under which they swim. For small larvae in low Reynolds number (Re) hydrodynamic environments dominated by frictional drag, temperature‐induced changes in the physics of water flow have the greatest effect on swimming performance. For larger larvae, in higher Re environments, temperature‐induced changes in physiology become more important as larvae swim faster and changes in swimming patterns and mechanics occur. Physiological rates at different temperatures have been quantified using Q₁₀s with the assumption that temperature only affected physiological variables. Consequently, Q₁₀s that did not consider temperature‐induced changes in viscosity overestimated the effect of temperature on physiology by 58% and 56% in cold‐water herring and cod larvae respectively. In contrast, in warm‐water Danube bleak larvae, Q₁₀s overestimated temperature‐induced effects on physiology by only 5–7%. This may be because in warm water, temperature‐induced changes affect viscosity to a smaller degree than in cold water. Temperature also affects muscle contractility and efficiency and at high swimming velocities, efficiency decreases more rapidly in cold‐exposed than in warm‐exposed muscle fibres. Further experiments are needed to determine whether temperature acts differently on swimming metabolism in different thermal environments. While hydrodynamic factors appear to be very important to larval fish swimming performance in cold water, they appear to lose importance in warm water where temperature effects on physiology dominate. This may suggest that major differences exist among locomotory capacities of larval fish that inhabit cold, temperate waters compared to those that live in warm tropical waters. It is possible that fish larvae may have developed strategies that affect dispersal and recruitment in different aquatic habitats in order to cope not only with temperature‐induced physiological challenges, but physical challenges as well.     

Peptide-induced hyperactivation-like vigorous flagellar movement in starfish sperm

Asterosap, a sperm-activating peptide (SAP) from the starfish egg jelly coat, is diffusible and controls a cGMP-signalling pathway in starfish sperm in the same manner as resact, a potent chemoattracting SAP in sea urchins. This fact suggests that asterosap may serve as a chemoattractant like resact at concentrations with appropriate gradients. Since asterosap is one of three egg jelly components, which in concert induce the acrosome reaction, it is still worthwhile to evaluate how asterosap modulates sperm motility prior to this reaction. We analysed the flagellar movement of sperm of the starfish Aphelasterias japonica in artificial seawater (ASW) containing the asterosap isoform P15 at 1 micromol l(-1). We found that sperm swim straighter with more symmetrical flagellar movement in P15 than in ASW, but without any significant difference in the flagellar beat frequency and the swimming velocity. The flagellar movement is, however, dramatically different between sperm firmly attached to the solid surface by the head in P15 and those attached in ASW: in P15 the flagellum bends to a greater extent, with higher curvature and with higher shear angle up to a right angle to the flagellar wave axis, and beats at an increased frequency. The vigorous flagellar movement of sperm, which can be activated when sperm are placed in high-load circumstances just as entering into a jelly layer, may increase propulsive forces and hydrodynamic resistances, allowing sperm to undergo the acrosome reaction as effectively as possible.     

Interplay between shear stress and adhesion on neutrophil locomotion

Leukocyte locomotion over the lumen of inflamed endothelial cells is a critical step, following firm adhesion, in the inflammatory response. Once firmly adherent, the cell will spread and will either undergo diapedesis through individual vascular endothelial cells or will migrate to tight junctions before extravasating to the site of injury or infection. Little is known about the mechanisms of neutrophil spreading or locomotion, or how motility is affected by the physical environment. We performed a systematic study to investigate the effect of the type of adhesive ligand and shear stress on neutrophil motility by employing a parallel-plate flow chamber with reconstituted protein surfaces of E-selectin, E-selectin/PECAM-1, and E-selectin/ICAM-1. We find that the level and type of adhesive ligand and the shear rate are intertwined in affecting several metrics of migration, such as the migration velocity, random motility, index of migration, and the percentage of cells moving in the direction of flow. On surfaces with high levels of PECAM-1, there is a near doubling in random motility at a shear rate of 180 s(-1) compared to the motility in the absence of flow. On surfaces with ICAM-1, neutrophil random motility exhibits a weaker response to shear rate, decreasing slightly when shear rate is increased from static conditions to 180 s(-1), and is only slightly higher at 1000 s(-1) than in the absence of flow. The random motility increases with increasing surface concentrations of E-selectin and PECAM-1 under static and flow conditions. Our findings illustrate that the endothelium may regulate neutrophil migration in postcapillary venules through the presentation of various adhesion ligands at sites of inflammation.     

Routine and active metabolic rates of migrating adult wild sockeye salmon (Oncorhynchus nerka Walbaum) in seawater and freshwater

We present the first data on the differences in routine and active metabolic rates for sexually maturing migratory adult sockeye salmon (Oncorhynchus nerka) that were intercepted in the ocean and then held in either seawater or freshwater. Routine and active oxygen uptake rates (MO2) were significantly higher (27%-72%) in seawater than in freshwater at all swimming speeds except those approaching critical swimming speed. During a 45-min recovery period, the declining postexercise oxygen uptake remained 58%-73% higher in seawater than in freshwater. When fish performed a second swim test, active metabolic rates again remained 28%-81% higher for fish in seawater except at the critical swimming speed. Despite their differences in metabolic rates, fish in both seawater and freshwater could repeat the swim test and reach a similar maximum oxygen uptake and critical swimming speed as in the first swim test, even without restoring routine metabolic rate between swim tests. Thus, elevated MO2 related to either being in seawater as opposed to freshwater or not being fully recovered from previous exhaustive exercise did not present itself as a metabolic loading that limited either critical swimming performance or maximum MO2. The basis for the difference in metabolic rates of migratory sockeye salmon held in seawater and freshwater is uncertain, but it could include differences in states of nutrition, reproduction, and restlessness, as well as ionic differences. Regardless, this study elucidates some of the metabolic costs involved during the migration of adult salmon from seawater to freshwater, which may have applications for fisheries conservation and management models of energy use.     

Good eaters, poor swimmers: compromises in larval form

Compromises between swimming and feeding affect larval formand behavior. Two hypotheses, with supporting examples, illustratethese feeding-swimming trade-offs. (1) Extension of ciliatedbands into long loops increases maximum clearance rates in feedingbut can decrease stability of swimming in shear flows. A hydromechanicalmodel of swimming by ciliated bands on arms indicates that morphologieswith high performance in swimming speed and weight-carryingability in still water differ from morphologies conferring highstability to external disturbances such as shear flows. Instabilityincludes movement across flow lines from upwelling to downwellingwater in vertical shear. Thus a hypothesis for the high armelevation angles of sea urchin larvae, which reduce speed instill water, is that they reduce a downward bias imposed bythe vertical shear in turbulence. Observations of sea urchinlarvae in vertical shear and comparisons among brittle starlarvae are consistent with the performance trade-offs predictedby the model. (2) Structures and behaviors that reduce swimmingspeed can enhance filtering for feeding. In the opposed-bandfeeding mechanisms of veligers and many trochophores, ciliapush water to swim but movement of cilia relative to the wateroccurs when cilia overtake and capture particles. Features thatmay increase clearance rates at the expense of speed and weightcapacity include structures that increase drag or body weightand a ciliary band that beats in opposition to the feeding-swimmingcurrent. Larval feeding mechanisms inherited from distant ancestorsresult in different swimming-feeding trade-offs. The differenttrade-offs further diversify larval form and behavior.     

Reversible and Irreversible Adhesion of Motile Escherichia coli Cells Analyzed by Total Internal Reflection Aqueous Fluorescence Microscopy

The initial events in bacterial adhesion are often explained as resulting from electrostatic and van der Waals forces between the cell and the surface, as described by DLVO theory (developed by Derjaguin, Landau, Verwey, and Overbeek). Such a theory predicts that negatively charged bacteria will experience greater attraction toward a negatively charged surface as the ionic strength of the medium is increased. In the present study we observed both smooth-swimming and nonmotile Escherichia coli bacteria close to plain, positively, and hydrophobically coated quartz surfaces in high- and low-ionic-strength media by using total internal reflection aqueous fluorescence microscopy. We found that reversibly adhering cells (cells which continue to swim along the surface for extended periods) are too distant from the surface for this behavior to be explained by DLVO-type forces. However, cells which had become immobilized on the surface did seem to be affected by electrostatic interactions. We propose that the “force” holding swimming cells near the surface is actually the result of a hydrodynamic effect, causing the cells to swim at an angle along the glass, and that DLVO-type forces are responsible only for the observed immobilization of irreversibly adhering cells. We explain our observations within the context of a conceptual model in which bacteria that are interacting with the surface may be thought of as occupying one of three compartments: bulk fluid, near-surface bulk, and near-surface constrained. A cell in these compartments feels either no effect of the surface, only the hydrodynamic effect of the surface, or both the hydrodynamic and the physicochemical effects of the surface, respectively.     

Mechanisms of embryonic drift in the amphidromous goby,Rhinogobius brunneus

Synopsis We tested the reactions of free embryos of the amphidromous goby, Rhinogobius brunneus, to light under both artificial and ambient conditions along streams in which their downstream migration occurs. The embryos showed a positive phototaxis to 500 1ux light but a negative response to light of more than 5000 lux. They were able to swim at 1.54 cm sec^–1 t in still water and showed positive rheotaxis, but their swimming ability was not sufficient to allow active movement in rapids. Ambient natural light conditions varied among locations in relation to local topographical features. The variation in the diel periodicity of their migration could be explained by the interaction between behavioral reactions of embryos and environmental factors along river courses.     

Shear modulation of intercellular contact area between two deformable cells colliding under flow

Shear rate has been shown to critically affect the kinetics and receptor specificity of cell-cell interactions. In this study, the collision process between two modeled cells interacting in a linear shear flow is numerically investigated. The two identical biological or artificial cells are modeled as deformable capsules composed of an elastic membrane. The cell deformation and trajectories are computed using the immersed boundary method (IBM) for shear rates of 100-400s(-1). As the two cells collide under hydrodynamic shear, large local cell deformations develop. The effective contact area between the two cells is modulated by the shear rate, and reaches a maximum value at intermediate levels of shear. At relatively low shear rate, the contact area is an enclosed region. As the shear rate increases, dimples form on the membrane surface, and the contact region becomes annular. The nonmonotonic increase of the contact area with the increase of shear rate from computational results implies that there is a maximum effective receptor-ligand binding area for cell adhesion. This finding suggests the existence of possible hydrodynamic mechanism that could be used to interpret the observed maximum leukocyte aggregation in shear flow. The critical shear rate for maximum intercellular contact area is shown to vary with cell properties such as radius and membrane elastic modulus.     

Resisting flow–laboratory study of rheotaxis of the estuarine copepod Pseudodiaptomus annandalei

Rheotaxis is a ubiquitous phenomenon among aquatic animals and thought to be an adaptation to maintain populations in flowing waters. While many estuarine copepods can retain their populations in estuaries with net seaward flow, rheotaxis of individual copepods has not been reported before. In this study, the behavior of a calanoid copepod Pseudodiaptomus annandalei in flow was examined in a recirculating laboratory flume. This estuarine copepod displayed different responses to ambient flow fields while swimming in the water column or attaching to the flume bed (walls). Copepods in the water column showed vigorous countercurrent swimming by occasional bounding when flow velocity was increased up to 2.1 cm s^?1, but none of the individuals in the water column were retained in the flume when flow speeds were higher than 4 cm s^?1. This indicates P. annandalei profits little from rheotaxis to withstand flow when they were swimming in the water column. Instead, more individuals attempted sinking downwards to the slow flow region near the flume bed (walls) and showed active substrate attachment to avoid being flushed out by the high-velocity channel flow. The results suggest that P. annandalei benefits from rheotaxis and association with the substrate which allows them to hold position well at ambient flow velocities up to 3 cm s^?1. These adaptive responses might be important for population maintenance.