Induced mutagenesis in Ustilago maydis

Summary A UV-revertible mutant of the nar1 structural gene for nitrate reductase was isolated in wildtype (nar ⁺ nir ⁺) Ustilago maydis. It proved to be vigorously revertible by gamma rays as well. Genetic analysis revealed that the strain carried a single, nonleaky, recessive allele (nar1-m) with an unusually high spontaneous reversion rate (3×10^-5/div.). Reliable reversion frequencies were determined with a special agar medium that reduced the normally high level of residual growth observed on nitrate minimal agar. Radiation-induced reversion frequencies in the homozygous diploid were approximately twice those in the hapliod. Following crosses to wild type, two revertants (one spontaneous and one UV-induced) were found to map at nar1. Although the molecular basis of nar1-m reversion is not known, available data suggest that some form of point mutation is involved.     

Molecular cloning of a gene required for DNA replication in Ustilago maydis

TSD2, a gene necessary for DNA synthesis in Ustilago maydis, was cloned by complementation of the temperature sensitive growth defect of a mutant known previously as pol1-1 and renamed here tsd2-1. Linkage analysis established that the cloned fragment contained an allele of tsd2-1 and not a suppressor. DNA sequence determination of the cloned DNA fragment indicated the presence of a single large uninterrupted open reading frame capable of encoding a protein of 845 amino acids without homology to any known gene involved in DNA synthesis. TSD2 was found to be cell cycle-regulated and mRNA levels peaked in early S or G₁ phase. Received: 27 March 1996 / Accepted: 28 August 1996     

Establishment of compatibility in the Ustilago maydis/maize pathosystem

The fungus Ustilago maydis is a biotrophic pathogen parasitizing on maize. The most prominent symptoms of the disease are large tumors in which fungal proliferation and spore differentiation occur. In this study, we have analyzed early and late tumor stages by confocal microscopy. We show that fungal differentiation occurs both within plant cells as well as in cavities where huge aggregates of fungal mycelium develop. U. maydis is poorly equipped with plant CWDEs and we demonstrate by array analysis that the respective genes follow distinct expression profiles at early and late stages of tumor development. For the set of three genes coding for pectinolytic enzymes, deletion mutants were generated by gene replacement. Neither single nor triple mutants were affected in pathogenic development. Based on our studies, we consider it unlikely that U. maydis feeds on carbohydrates derived from the digestion of plant cell wall material, but uses its set of plant CWDEs for softening the cell wall structure as a prerequisite for in planta growth.     

Killer phenomenon in Ustilago maydis: Mapping viral functions

Summary Nonkiller progeny, lacking segments from the dsRNA genome of the virus associated with the P4 killer specifity, were recovered from a cross between a P4 killer strain and a sensitive strain. Three patterns of deletions were identified among the non-killers. In addition to the loss of killer activity these strains lost also the immunity and the ability to exclude the genomes of the virus associated with the P6 killer specifity but retained the essential information for viral coats. The patterns of deletions permitted the assignment of the killer function to 2 segments in the P4 genome, one in the medium group and the other in the lightest segment of the genome. Coat formation, as in the P6 virus, is associated with the heavy components of the dsRNA segmented genome but the information is organized somewhat differently from the organization of the virus associated with the P6 killer specifity. The loss of the exclusion function by the nonkillers enabled the reconstruction of hybrid viral genomes that restore specific killer activity. Thus, such hybrids indicate the position of the killer-related information in the P6 genome and suggest a role to the killer protein of P4 in the exclusion of specific dsRNA molecules.The study was supported in part by a Grant from the Branch of Basic Research of the Israel National Academy of Sciences     

Polyamine metabolism in maize tumors induced by Ustilago maydis

Alterations occurring in polyamine metabolism of maize in tumors formed during the interaction with the biotrophic pathogenic fungus Ustilago maydis were analyzed. During the process, a striking increase in maize polyamine biosynthesis, mainly free and conjugated putrescine occurred in the tumors induced by the fungus, and in the neighbor plant tissues. This increase correlated with an activation mainly of Adc, Samdc1, Zmsamdc2 and Zmsamdc3, but not of Zmodc, Zmspds1 and Zmspds2 genes, and an elevation in arginine decarboxylase activity, confirming a predominant role of this enzyme in the process. Evidences for a possible contribution of spermidine and spermine degradation by polyamine oxidase activity, probably related to cell wall stiffening or lignification during tumor growth, were also obtained. It is suggested that polyamines, mainly putrescine, might play an active role in the pathosystem maize-U. maydis.     

Isolation of a carbon source-regulated gene from Ustilago maydis

 We have isolated a carbon source-regulated gene from the phytopathogenic fungus Ustilago maydis by use of a promoter-probe vector. This gene, called crg1, is strongly induced by L-arabinose and efficiently repressed by D-glucose and D-xylose. The predicted 36.5-kDa mature crg1 gene product lacks similarity to known proteins but is likely to be secreted. Sequences required for regulated expression of a reporter gene are contained within a 3.6-kb fragment upstream of the crg1 gene. The promoter of crg1 fulfils requirements for an efficient controllable gene expression system in U. maydis. Received: 16 March 1996 / Accepted: 22 August 1996     

Crosstalk between cAMP and pheromone signalling pathways in Ustilago maydis

In the phytopathogenic basidiomycete Ustilago maydis mating and dikaryon formation are controlled by a pheromone/receptor system and the multiallelic b locus. Recently, a gene encoding a G protein α subunit, gpa3, was isolated and has subsequently been implicated in pheromone signal transduction. Mutants deleted for gpa3 are sterile and nonpathogenic, and exhibit a morphology that is similar to that of mutants with defects in the adenylate cyclase gene uac1. We have found that the sterility and mutant morphology of gpa3 deletion strains can be rescued by exogenous cAMP. In these mutants and in the corresponding wild-type strains, exogenous cAMP stimulates pheromone gene expression to a level comparable to that seen in the pheromone-stimulated state. In addition, we demonstrate that uac1 is epistatic to gpa3. We conclude that Gpa3 controls the cAMP signalling pathway in U.maydis and discuss how this pathway feeds into the pheromone response. Received: 4 May 1998 / Accepted: 24 July 1998     

The detection of post-meiotic segregation without tetrad analysis in Ustilago maydis

Summary Post-meiotic segregation (PMS) results in the formation of mixed genotypes from single meiotic products. A method is described in which single members of tetrads are selected, and these are then tested for their genetic homogeneity. The method is applied to Ustilago maydis using crosses which are heteroallelic for nar 1, the structural gene for nitrate reductase. In the absence of PMS, meiotic products containing a nar ⁺ recombinant are genetically pure (the equivalent of a 6 mutant: 2 wild-type octad). With PMS, a nar ⁺ recombinant clone arises in association with a nar ^- clone and these are otherwise genetically identical (the equivalent of a 7 mutant: 1 wild type octad). The procedure will make it possible to search for mutant strains which are defective in the correction of mismatched bases in hybrid DNA formed during recombination. Among 26 nar ⁺ recombinants from a control cross, PMS was detected on 3 occasions. In an equivalent cross, both parents were uvs 3, a mutant defective in the excision of pyrimidine dimers from DNA. Among 43 nar ⁺ recombinants, 7 arose from PMS. Thus the frequency of PMS for the nar alleles is about 15% and the excision of pyrimidine dimers is probably unrelated to the repair of mismatched bases in hybrid DNA.     

Immunity and resistance to the KP6 toxin of Ustilago maydis

Summary The KP6 toxin of Ustilago maydis, encoded by segmented double-stranded (ds) RNA viruses, is lethal to sensitive strains of the same species and related species. The toxin consists of two polypeptides, and , synthesized as a single preprotoxin, which are not covalently linked. Neither polypeptide alone is toxic, but killer activity can be restored by in vitro and in vivo complementation. Killer-secreting strains are resistant to the toxin they produce. Resistance is conferred by a single recessive nuclear gene. This study describes a search for cytoplasmic factors that may confer resistance, also referred to as immunity. The approaches used to detect cytoplasmic immunity included transmission of dsRNA and transmission of virus particles to sensitive cells by cytoduction, cytoplasmic mixing in diploids and infection with viruses. An alternative approach was also used to express cloned cDNAs of the KP6 toxin-encoding dsRNA and of the and polypeptides. The results indicated that no immunity to KP6 can be detected. While KP6, and polypeptides were expressed by resistant cells, neither KP6 nor were expressed in sensitive strains. The polypeptide was expressed in sensitive cells, but it did not confer immunity. These results suggest that neither the preprotoxin nor the or polypeptides confer immunity and thus may be the toxic component of the binary toxin.     

The influence of DNA binding protein on the substrate affinities of DNA polymerase from Ustilago maydis: One polymerase implicated in both DNA replication and repair

Summary The DNA polymerase of Ustilago maydis is stimulated by a DNA binding protein from the same organism. Analysis of this stimulation shows that there is an increase in affinity for both substrates of the reaction. The apparent Km for deoxynucleoside triphosphates is decreased 3 fold, and that for denatured DNA by 4 fold. In both cases the maximum velocity (Vmax) is increased 1.2 to 1.4 fold. It is suggested that the variability in the affinity of the enzyme for deoxynucleoside triphosphates mediated by the binding protein may provide the basis for the UV sensitivity of pyrimidine auxotrophs in this organism.     

The kinetics of the active and de-energized transport of O-methyl glucose in Ustilago maydis

The kinetics of the uptake and efflux of 3-O-methyl-glucose in sporidia of Ustilago maydis were measured, both in active cells and in cells whose metabolic activity had been inhibited by azide and iodoacetate.The de-energized transport system proved to be carrier mediated with apparent affinity constants 13 ± 2 mM outside (K₀) and 18 ± 2 mM inside (K₁). The apparent maximum rate constants for the same system were 0.66 ± 0.05 mmol/l cell water per min for uptake (V₊ and 0.53 ± 0.04 mmol/l cell water per min for efflux (V_-. For the active system K₀ = 0.08 ± 0.01, K₁ > 40, V₊ = 9.7 ± 0.5 and V₋ 1.1 ± 0.9 (in equivalent units). These results are discussed in the context of the carrier mechanism as proposed by Regen and Morgan (Regen, D.M. and Morgan, H.E. (1964) Biochim. Biophys. Acta 79, 151–166).The antifungal compound carboxin had no effect on de-energized transport but was shown to decrease both K₀ and V₊ in the active system. Phloretin and phlorizin were also found to be without effect on de-energized cells but the former enhanced while the latter inhibited active uptake.     

The ACC1 gene, encoding acetyl-CoA carboxylase, is essential for growth in Ustilago maydis

Acetyl-CoA carboxylase [ACCase; acetylCoA: carbon dioxide ligase (ADP forming), EC 6.4.1.2] catalyses the ATP-dependent carboxylation of acetylCoA to form malonyl-CoA. We have amplified a fragment of the biotin carboxylase (BC) domain of the Ustilago maydis acetyl-CoA carboxylase (ACC1) gene from genomic DNA and used this amplified DNA fragment as a probe to recover the complete gene from a EMBL3 genomic library. The ACC1 gene has a reading frame of 6555 nucleotides, which is interrupted by a single intron of 80 bb in length. The gene encodes a protein containing 2185 amino acids, with a calculated M_r of 242 530; this is in good agreement with the size of ACCases from other sources. Further identification was based on the position of putative binding sites for acetyl-CoA, ATP, biotin and carboxybiotin found in other ACCases. A single ACC1 allele was disrupted in a diploid wild-type strain. After sporulation of diploid disruptants, no haploid progeny containing a disrupted acc1 allele were recovered, even though an exogenous source of fatty acids was provided. The data indicate that, in U. maydis, ACCase is required for essential cellular processes other than de novo fatty acid biosynthesis.The EMBL accession number for the sequence reported in this paper is Z46886     

Infection of maize leaves with Ustilago maydis prevents establishment of C4 photosynthesis

The Basidiomycete fungus Ustilago maydis is the common agent of corn smut and is capable of inducing gall growth on infected tissue of the C₄ plant maize (Zea mays). While U. maydis is very well characterized on the genetic level, the physiological changes in the host plant in response to U. maydis infection have not been studied in detail, yet.Therefore, we examined the influence of U. maydis infection on photosynthetic performance and carbon metabolism in maize leaf galls.At all stages of development, U. maydis-induced leaf galls exhibited carbon dioxide response curves, CO₂ compensation points and enzymatic activities that are characteristic of C₃ photosynthesis, demonstrating that the establishment of C₄ metabolism is prevented in infected tissue. Hexose contents and hexose/sucrose ratio of leaf galls remained high at 6 days post infection, while a shift in free sugar metabolism was observed in the uninfected controls at that time point. Concomitantly, transitory starch production and sucrose accumulation during the light period remained low in leaf galls. Given that U. maydis is infectious on young developing tissue, the observed changes in carbohydrate metabolism suggest that the pathogen manipulates the developing leaf tissue to arrest sink-to-source transition in favor of maintaining sink metabolism in the host cells.Furthermore, evidence is presented that carbohydrate supply during the biotrophic phase of the pathogen is assured by a fungal invertase.     

Ustilago maydisMating Hyphae Orient Their Growth toward Pheromone Sources

Snetselaar, K. M., Bölker, M., and Kahmann, R. 1996.Ustilago maydismating hyphae orient their growth toward pheromone sources.Fungal Genetics and Biology20,299–312. When small drops ofUstilago maydissporidia were placed 100–200 μm apart on agar surfaces and covered with paraffin oil, sporidia from one drop formed thin hyphae that grew in a zig-zag fashion toward the other drop if it contained sporidia making the appropriate pheromone. For example,a2b2mating hyphae grew towarda1b1anda1b2mating hyphae, and the filaments eventually fused tip to tip. Time-lapse photography indicated that the mating hyphae can rapidly change orientation in response to nearby compatible sporidia. When exposed to pheromone produced by cells in an adjacent drop, haploid sporidia with thea2allele began elongating before sporidia with thea1allele. Sporidia without functional pheromone genes responded to pheromone although they did not induce a response, and sporidia without pheromone receptors induced formation of mating hyphae although they did not form mating hyphae. Diploid sporidia heterozygous atbbut not ataformed straight, rigid, aerial filaments when exposed to pheromone produced by the appropriate haploid sporidia. Again, thea2a2b1b2strain formed filaments more quickly than thea1a1b1b2strain. Taken together, these results suggest that thea2pheromone diffuses less readily or is degraded more quickly than thea1pheromone.     

The cAMP Signal Transduction Pathway Mediates Resistance to Dicarboximide and Aromatic Hydrocarbon Fungicides in Ustilago maydis

The cAMP signal transduction pathway mediates the switch between yeast-like and filamentous growth and influences both sexual development and pathogenicity in the smut fungus Ustilago maydis. Signaling via cAMP may also play a role in fungicide resistance in U. maydis. In particular, the adr1 gene, which encodes the catalytic subunit of the U. maydis cAMP-dependent protein kinase (PKA), is implicated in resistance to the dicarboximide and aromatic hydrocarbon fungicides. In this study, we examined the sensitivity of PKA to vinclozolin and could not demonstrate direct inhibition of protein kinase activity. However, we did find that mutants with disruptions in the ubc1 gene, which encodes the regulatory subunit of PKA, were resistant to both vinclozolin and chloroneb. We also found that these fungicides altered the morphology of both wild-type and ubc1 mutant cells. In addition, strains that are defective in ubc1 display osmotic sensitivity, a property often associated with vinclozolin and chloroneb resistance in other fungi.     

玉米瘤黑粉菌的寄生策略及其调控机制

玉米瘤黑粉病是由担子菌Ustilago maydis对玉米的活体寄生所引起的真菌病害。该病原菌为双相型真菌,需要寄生于玉米植株来完成其有性生殖过程。综合相关研究报道,本文把U.maydis对寄主植物的寄生过程划分为7个阶段,包括形成致病性双核菌丝体、附着寄主植物表面、穿透寄主表皮、消减寄主防御反应、在寄主体内菌丝增殖、使寄主瘤变和生成厚垣孢子等。围绕寄生进程特点和关键基因,分别阐述了各个阶段的相关调控机制以及对寄主植物的致病性;展现了U.maydis为达到有性生殖目的而实施步步为营的寄生策略。本文对U.maydis寄生过程的阶段划分,有助于人们深入了解U.maydis与寄主植物之间互作机制、提供相关病害防控新思路。     

Inducible, error-free DNA repair in tsl recA mutants of E. coli

Summary Host cell reactivation and UV reactivation and mutagenesis of UV-irradiated phage were measured in tsl recA ⁺ and tsl recA host mutants. Host cell reactivation was slightly more efficient in the tsl recA strain compared to the tsl ⁺ recA strain. Phage was UV-reactivated in the tsl recA strain with about one-half the efficiency of that in the wild type strain, but there was no corresponding mutagenesis of phage. UV-reactivation was also slightly lower and mutagenesis several-fold lower than normal in the tsl recA ⁺ strain. To account for these observations, we propose that there is an inducible, error-free pathway of DNA repair in E. coli that competes with error-prone repair for repair of phage lesions.     

Detection of killer-independent dsRNA plasmids in Ustilago maydis by a simple and rapid method of extraction of dsRNA

A novel method for efficient and rapid isolation of dsRNA molecules was developed. The dsRNA content of Ustilago maydis was reexamined; two distinct dsRNA classes were identified. Class I includes the dsRNA segments reported earlier for U. maydis virus systems and class II includes unencapsidated dsRNA molecules that were barely detected by the conventional extraction methods despite their high titer. Segments of the class II, some of which are reported for the first time, were further characterized; all the segments are independent of the killer system and other encapsidated dsRNA molecules. These segments are cytoplasmically transmitted and, in sharp contrast with class I-encapsidated dsRNA segments, their relative copy number decreases rapidly while entering the stationary phase.