The restriction-modification system in Streptomyces flavopersicus

To clone bifunctional vectors in streptomycetes, it was necessary to define the restriction-modification system ofStreptomyces flavopersicus. Plasmid DNA from bifunctional vectors pIJ699 and pXED3-13, isolated fromE. coli strains with different methylation systems:E. coli DH5α (dam ⁺ dcm ⁺),E. coli MB5386(dam dcm), E. coli CB51 (dam dcm ⁺),E. coli NM544 (dam ⁺ dcm), was used for transformation of protoplasts from strainS. flavopersicus. Restriction ofdcm-methylated DNA fromS. flavopersicus was established. As a host in the intermediate cloning strainE. coli NM544 (dam ⁺ dcm) should be used, as thedcm-transmethylase-dependent strainS. flavopersicus does not process DNA from this strain.     

Effects of single and dual species herbivory on the behavioral responses of three thrips species to cotton seedlings

This study investigated the olfactory responses of 3 thrips species [Frankliniella schultzei Trybom, F. occidentalis Pergrande and Thrips tabaci Lindeman (Thysanoptera: Thripidae)] to cotton seedlings [Gossypium hirsutum L. (Malvales: Malvaceae)] simultaneously damaged by different combinations of herbivores. Cotton seedlings were damaged by foliar feeding Tetranychus urticae Koch (Trombidiforms: Tetranychidae), Helicoverpa armigera Hübner (Lepidoptera: Noctuidae), Aphis gossypii Glover (Hemiptera: Aphididae) or root feeding Tenebrio molitor L. (Coleoptera: Tenebrionidae). Thrips responses to plants simultaneously damaged by 2 species of herbivore were additive and equivalent to the sum of the responses of thrips to plants damaged by single herbivore species feeding alone. For example, F. occidentalis was attracted to T. urticae damaged plants but more attracted to undamaged plants than to plants damaged by H. armigera. Plants simultaneously damaged by low densities of T. urticae and H. armigera repelled F. occidentalis but as T. urticae density increased relative to H. armigera density, F. occidentalis attraction to coinfested plants increased proportionally. Thrips tabaci did not discriminate between undamaged plants and plants damaged by H. armigera but were attracted to plants damaged by T. urticae alone or simultaneously damaged by T. urticae and H. armigera. Olfactometer assays showed that simultaneous feeding by 2 herbivores on a plant can affect predator–prey interactions. Attraction of F. occidentalis to plants damaged by its T. urticae prey was reduced when the plant was simultaneously damaged by H. armigera, T. molitor, or A. gossypii and F. schultzei was more attracted to plants simultaneously damaged by T. urticae and H. armigera than to plants damaged by T. urticae alone. We conclude that plant responses to feeding by 1 species of herbivore are affected by responses to feeding by other herbivores. These plant‐mediated interactions between herbivore complexes affect the behavioral responses of thrips which vary between species and are highly context dependent.     

Neutrophil activation by Candida glabrata but not Candida albicans promotes fungal uptake by monocytes

Candida albicans and Candida glabrata account for the majority of candidiasis cases worldwide. Although both species are in the same genus, they differ in key virulence attributes. Within this work, live cell imaging was used to examine the dynamics of neutrophil activation after confrontation with either C. albicans or C. glabrata. Analyses revealed higher phagocytosis rates of C. albicans than C. glabrata that resulted in stronger PMN (polymorphonuclear cells) activation by C. albicans. Furthermore, we observed differences in the secretion of chemokines, indicating chemotactic differences in PMN signalling towards recruitment of further immune cells upon confrontation with Candida spp. Supernatants from co‐incubations of neutrophils with C. glabrata primarily attracted monocytes and increased the phagocytosis of C. glabrata by monocytes. In contrast, PMN activation by C. albicans resulted in recruitment of more neutrophils. Two complex infection models confirmed distinct targeting of immune cell populations by the two Candida spp.: In a human whole blood infection model, C. glabrata was more effectively taken up by monocytes than C. albicans and histopathological analyses of murine model infections confirmed primarily monocytic infiltrates in C. glabrata kidney infection in contrast to PMN‐dominated infiltrates in C. albicans infection. Taken together, our data demonstrate that the human opportunistic fungi C. albicans and C. glabrata are differentially recognized by neutrophils and one outcome of this differential recognition is the preferential uptake of C. glabrata by monocytes.     

Activation and inhibition of mitochondrial adenosine triphosphatase by various anions and other agents

The activating or inhibiting actions of a variety of anion species and of oligomycin, aurovertin and Dio-9 on the ATPase of a sonic particle preparation of rat liver mitochondria have been characterized by measurements of the relevantV _max,K _i andK _m values.The normalV _max was increased by a factor near 7 by the anions: dichromate, chromate, pyrophosphate, orthophosphate, orthoarsenate and sulphate. The fully activating concentration varied from about 2 mM for dichromate to 150 mM for sulphate. The increase inV _max was accompanied by a time-dependent decrease in (K _i)ADP, but there was no change in (K _m)ATP. The increase inV _max by the activating anions was abolished by aurovertin; but in presence of oligomycin, the lowV _max was increased by the activating anions by the same factor as theV _max in absence of oligomycin.Certain anions, notably azide, decreasedV _max, but did not affect (K _i)ADP or (K _m)ATP. The decrease inV _max by azide and oligomycin were approximately additive. Even at high concentration, Dio-9 was without detectable effect on the ATPase, but it had a gramicidinlike effect on the intact mitochondria.The specificity of the ATPase for ATP relative to GTP was found to be attributable to the high value of (V _max)ATP compared with (V _max)GTP. The values of (K _m)ATP and (K _m)GTP were virtually the same.Some rationalization of these and other supporting observations is attempted in terms of present knowledge of the constitution of the ATPase complex.     

The S-n-propyl analogue of S-adenosylmethionine

A special strain of Saccharomyces cerevisiae responded to a supplement of S-n-propyl-l-homocysteine in the culture medium by synthesizing S-adenosyl-(S-n-propyl)l-homycysteine, the S-n-propyl analogue of S-adenosylmethionine. S-n-Butyl-l-homocysteine reacted sparingly with this strain, but S-isopropyl-l-homocysteine failed to form detectable quantities of the corresponding S-adenosylsulfonium were compound. The S-n-propyl compound was isolated by extraction of the cells, followed by ion-exchange chromatography, which separated it from endogenous S-adenosylmethionine. The structure was determined by hydrolytic procedures leading to overlapping fragments of known structure, 5′-n-propylthioadenosine and S-n-propyl-l-homocysteine. The new sulfonium compound was examined for its activity as n-propyl donor by substituting it for S-adenosylmethionine in methyltransferase systems. Enzymatic transpropylation was observed with S-adenosylmethionine: l-homocysteine S-methyltransferase (EC 2.1.1.10). Its rate was low in the S-adenosylmethionine: N-acetylserotonin O-methyltransferase system (EC 2.1.1.4), and below recognition with S-adenosylmethionine: guanidonoacetate methyltransferase (EC 21.1.2) and S-adnosylmethionine: histame N-methyltransferase (EC 2.1.1.8).     

A Role for Pectinase and Protease Inhibitors in Fungal Rot Development in Tomato Fruits

B. cinerea and C. atramentarium rotted wound-inoculated green tomato fruits and wounded or intact ripe fruits while G. cingulata developed rots only in ripe fruits. Pectic en-zymes were extracted from the fruit tissue rotted by B. cinerea and C. atramentarium but no pectic enzymes attributable to the fungus were detected in ripe fruits rotted by G. cingulata. G. cingulata produced endo-PG and endo-PL in vitro, C. atramentarium produced endo-PL in vitro and in vivo and B. cinerea produced exo-PG in vitro and in green fruits but endo-PG and endo-PL in ripe fruits. Well ripened tomato fruits contained high levels of endogenous PG. All three fungi produced proteolytic enzymes in vitro and in vivo. Proteases produced by G. cingulata and C. atramentarium had optimum activity at pH 9 to 10 and were not trypsin-like or chymotrypsin-like in nature. Protease produced by B. cinerea had optimum activity at pH 7 and showed both trypsin and chymotrypsin-like activity. Proteins extracted from the cell walls of tomato fruits inhibited both the endo-PG and endo-PL produced by G. cingulata and the endo-PL produced by B. cinerea but did not in-hibit the activity of PGs produced by B. cinerea, the endo-PL produced by C. atramentarium or the endogenous PG from tomato fruits. The cell wall proteins also contained trypsin and chymotrypsin inhibitor activity which inhibited 70 % of the activity of the protease produced by B. cinerea, but had little effect on the proteases produced by G. cingulata, C. atramentarium or the tomato endogenous protease. Enzymes produced in vitro by G. cingulata macerated green tomato tissue more slowly than enzymes produced in vitro by C. atramentarium and B. cinerea and the rate of mation was further reduced in the presence of added cell wall proteins. Excess inhibitor of the little effect on the rate of maceration by the enzymes produced by C. atramentarium of the cinerea.     

Mass production and utilization ofTrichogramma: 10. Control of the codling mothCydia pomonella and the summer fruit tortrix mothAdoxophyes orana [Lep.: Tortricidae]

The effectiveness ofTrichogramma dendrolimi, Trichogramma embryophagum, Trichogramma sp. strain 45 andTrichogramma sp. strain 48 to control the codling mothCydia pomonella L. and the summer fruit tortrix mothAdoxophyes orana F.R. was tested in 4 field trials (1984–1986). Four to sixTrichogramma treatments (depending on the temperature) each at 400 (pillar trees) to 9,000 (round tops) parasites per tree were carried out between June and August to insure the continuous presence ofTrichogramma in the plots. The monitoring was done by examining 3,000 to 10,000 apple fruits per plot. T. dendrolimi reduced the damage ofC. pomonella by 61.35%, ofA. orana by 72.85%.T. embryophagum reduced the damage ofC. pomonella by 50.06%, ofA. orana by 50.8%.Trichogramma strain 45 reduced the damage ofC. pomonella by 41.6% and ofA. orana by 87.9%,Trichogramma strain 48 by 57.2% and 51.2% respectively. The reduction of 67.1% in the number of apple fruits damaged byC. pomonella andA. orana obtained by the inundative releases ofT. dendrolimi in these experiments is considered economically and the use of this species in practice is recommended.      

Arbuscular mycorrhizal fungi on adjacent semi-natural grasslands with different vegetation in Japan

Arbuscular mycorrhizal (AM) fungi on Japanese semi-natural grasslands were investigated at three adjacent sites with different vegetation. The predominant grasses at the three sites were 1)Pleioblastus chino, 2)Miscanthus sinensis andArundinella hirta (M. sinensis/A. hirta), and 3)Zoysia japonica, respectively. The degree of colonization was higher inM. sinensis/A. hirta than inP. chino andZ. japonica. AM fungi were recovered by spore extraction and by pot cultures started from soil inoculum or from transplanting of field plants. Total spore number obtained by the spore extraction method was highest in the rhizosphere ofM. sinensis/A. hirta and lowest in that ofP. chino. AGlomus sp. resemblingG. geosporum predominated in association withM. sinensis/A. hirta andP. chino. FromZ. japonica, three species,Acaulospora gerdemannii, Glomus leptotichum, and a species resemblingG. clarum, were isolated by pot culture from soil and two species,A. longula andScutellospora cerradensis, by pot culture from transplanting ofZ. japonica. FromM. sinensis/A. hirta, one species,A. longula, was found by pot culture from soil. FromP. chino, no AM fungus was detected by either method. Single-spore culture confirmed thatG. leptotichum andA. gerdemannii are conspecific.     

Biodegradation of Pinus radiata softwood by white- and brown-rot fungi

The weight and component losses of Pinus radiata wood after decay by six species of white-rot and two species of brown-rot fungi for periods varying from 30 to 360 days were evaluated. Three groups of decayed wood samples were identified based on the principal component analysis (PCA) of the data on their weight and component losses. Selective lignin degradation was produced by Ceriporiopsis subvermispora and Punctularia atropurpurascens within different periods, the longest one lasting 90 days, and also by Merulius tremellosus after 90 days of biodegradation. Comparing the data on biodegradation of P. radiata by Trametes versicolor with the ones reported for biodegradation of Eucalyptus globulus and E. grandis indicated that P. radiata is as susceptible to wood decay by this white-rot fungus as the two types of hardwood.     

Characterization of aStaphylococcus aureusTransposon, Tn5405,Located within Tn5404and Carrying the Aminoglycoside Resistance Genes,aphA-3andaadE

A new staphylococcal composite transposon, designated Tn5405,carrying the genesaphA-3andaadE,which encode resistance to aminoglycosides, was partially characterized. The transposon is 12 kb long and is flanked by inverted repeated sequences displaying the characteristic features of an insertion sequence, named IS1182.This insertion sequence is 1864 bp long and has 23/33-bp imperfect inverted repeats at its ends. One of the IS1182copies delimiting Tn5405contains a copy of IS1181flanked by 8-bp direct repeats. Tn5405was found in the chromosome of MRSA clinical isolate BM3121, within a Tn552-related transposon, Tn5404.Tn5404was previously characterized following its transposition onto a β-lactamase plasmid harbored by BM3121. Two forms of the recombinant β-lactamase-encoding plasmid generated by the inversion of Tn5405within Tn5404were detected. IS1182was not detected in the DNA of 4 of the 17 tested MRSA isolates containingaphA-3and resistant to streptomycin. Thus,aphA-3andaadEgenes are not disseminated only by Tn5405or related transposons delimited by IS1182.     

Genetic analysis of rec E activities in Bacillus subtilis

Summary ArecE mutant (recE6) ofBacillus subtilis was constructed by insertion of a selectable marker into therecE coding region. The insertional inactivation of therecE gene renders cells very sensitive to DNA damaging agents and severely impairs intermolecular recombination, but does not markedly affect plasmid interstrand annealing and intramolecular recombination. TherecE6 allele was then introduced into a set of DNA repair-deficient strains ofB. subtilis. The removal of DNA damage by therecF,addAaddB,recH,recL andrecP gene products is strictly dependent on an activerecE gene product (recE-dependent pathway). On the other hand, the increased sensitization to purine adducts in theuvrA42recE6 andpolA5recE6 strains suggests that such lethal lesions may be removed either by therecE-dependent or by therecE-independent pathway.     

Direct effect of biocontrol agents on wilt and root-rot diseases of sesame

In Egypt, sesame cultivation is subject to attack by wilt and root-rot diseases caused by Fusarium oxysporum f.sp. sesami (Zap) Cast. and Macrophomina phaseolina (Maubl) Ashby causing losses in quality and quantity of sesame seed yield. Bacillus subtilis and Trichoderma viride isolates which were isolated from sesame rhizosphere were the most effective to antagonise fungal pathogens, causing high reduction of hyphal fungal growth. Trichoderma viride was found to be mycoparasitic on Fusarium oxysporum f.sp. sesami and M. phaseolina causing morphological atternation of fungal cells and sclerotial formation. In general, Bacillus subtilis, T. viride, avirulent Fusarium oxysporum isolate and Glomus spp. (Amycorrhizae) significantly reduced wilt and root-rot incidence of sesame plants at artificially infested potted soil by each one or two pathogens. Data obtained indicate that Glomus spp significantly reduced wilt and disease severity development on sesame plants followed by T. viride. Meanwhile, avirulent Fusarium oxysporum isolate followed by Glomus spp. were effective against root-rot disease incidence caused by M. phaseolina. Glomus spp. followed by B. subtilis significantly reduced wilt and root-rot disease of sesame plants. All biotic agents significantly reduced F. oxysporum f.sp. sesami and M. phaseolina counts in sesame rhizosphere at the lowest level. Glomus spp. and the avirulent isolate of F. oxysporum eliminated M. phaseolina in sesame rhizosphere. Meanwhile T. viride was the best agent at reducing F. oxysporum at a lower level than other treatments. Application of VA mycorrhizae (Glomus spp.) in fields naturally infested by pathogens significantly reduced wilt and root-rot incidence and it significantly colonised sesame root systems and rhizospheres compared to untreated sesame transplantings.     

Molecular Discrimination of Lactobacilli Used as Starter and Probiotic Cultures by Amplified Ribosomal DNA Restriction Analysis

Lactic acid bacteria such as Lactobacillus helveticus, L. delbrueckii subsp. delbrueckii, L. delbrueckii subsp. lactis, L. delbrueckii subsp. bulgaricus, L. acidophilus, and L. casei related taxa which are widely used as starter or probiotic cultures can be identified by amplified ribosomal DNA restriction analysis (ARDRA). The genetic discrimination of the related species belonging to these groups was first obtained by PCR amplifications by using group-specific or species-specific 16S rDNA primers. The numerical analysis of the ARDRA patterns obtained by using CfoI, HinfI, Tru9I, and ScrFI was an efficient typing tool for identification of species of the L. acidophilus and L. casei complex. ARDRA by using CfoI was a reliable method for differentiation of L. delbrueckii subsp. bulgaricus and L. delbrueckii subsp. lactis. Finally, strains ATCC 393 and ATCC 15820 exhibited unique ARDRA patterns with CfoI and Tru9I restriction enzymes as compared with the other strains of L. casei, L. paracasei, and L. rhamnosus. Received: 30 August 2000 / Accepted: 2 October 2000     

Adhesive mechanisms in cephalopods: a review

Abstract

Several genera of cephalopods (Nautilus, Sepia, Euprymna and Idiosepius) produce adhesive secretions, which are used for attachment to the substratum, for mating and to capture prey. These adhesive structures are located in different parts of the body, viz. in the digital tentacles (Nautilus), in the ventral surface of the mantle and fourth arm pair (Sepia), in the dorsal epidermis (Euprymna), or in the dorsal mantle side and partly on the fins (Idiosepius). Adhesion in Sepia is induced by suction of dermal structures on the mantle, while for Nautilus, Euprymna and Idiosepius adhesion is probably achieved by chemical substances. Histochemical studies indicate that in Nautilus and Idiosepius secretory cells that appear to be involved in adhesion stain for carbohydrates and protein, whilst in Euprymna only carbohydrates are detectable. De-adhesion is either achieved by muscle contraction of the tentacles and mantle (Nautilus and Sepia) or by secretion of substances (Euprymna). The de-adhesive mechanism used by Idiosepius remains unknown.     

发酵天山雪莲粗多糖的菌株筛选及护肤功效研究

【目的】利用微生物发酵植物可以提高多糖的产量,并且能够将原有的植物多糖转化成活性更高的新型发酵多糖,本研究围绕天山雪莲的粗多糖,基于发酵后的活菌数、多糖产量和护肤功效进行发酵菌种筛选,旨在获得适宜发酵天山雪莲粗多糖的优良菌株。【方法】利用不同菌株发酵天山雪莲粗多糖,通过平板菌落计数法测定活菌数,采用蒽酮比色法测定发酵液的多糖含量;采用细胞屏障损伤和抗炎模型,利用噻唑蓝(MTT)法检测细胞活率,利用格里斯法检测NO含量,评价发酵多糖在细胞模型中的护肤功效;利用特应性皮炎小鼠模型,分析发酵多糖对皮肤组织表观及经皮失水率、皮肤组织病理及表皮厚度变化和皮肤组织屏障蛋白-丝聚合蛋白的影响,评价发酵多糖在动物模型中的功效。【结果】不同菌株发酵天山雪莲粗多糖后的活菌数和多糖产量差异较大,其中枯草芽孢杆菌(Bacillus subtilis) CCFM1162和165-M1、干酪乳杆菌(Lactobacillus casei) CCFM1073、罗伊氏乳杆菌(L. reuteri) CCFM8631、清酒乳杆菌(L. sakei) GD17-9的活菌数较高,均不低于2.0×108 CFU/mL;而酿酒...     

Enhanced hydrogen production from glucose by metabolically engineered <Emphasis Type="Italic">Escherichia coli</Emphasis>

To utilize fermentative bacteria for producing the alternative fuel hydrogen, we performed successive rounds of P1 transduction from the Keio Escherichia coli K-12 library to introduce multiple, stable mutations into a single bacterium to direct the metabolic flux toward hydrogen production. E. coli cells convert glucose to various organic acids (such as succinate, pyruvate, lactate, formate, and acetate) to synthesize energy and hydrogen from formate by the formate hydrogen-lyase (FHL) system that consists of hydrogenase 3 and formate dehydrogenase-H. We altered the regulation of FHL by inactivating the repressor encoded by hycA and by overexpressing the activator encoded by fhlA, removed hydrogen uptake activity by deleting hyaB (hydrogenase 1) and hybC (hydrogenase 2), redirected glucose metabolism to formate by using the fdnG, fdoG, narG, focA, focB, poxB, and aceE mutations, and inactivated the succinate and lactate synthesis pathways by deleting frdC and ldhA, respectively. The best of the metabolically engineered strains, BW25113 hyaB hybC hycA fdoG frdC ldhA aceE, increased hydrogen production 4.6-fold from glucose and increased the hydrogen yield twofold from 0.65 to 1.3 mol H₂/mol glucose (maximum, 2 mol H₂/mol glucose).     

Use of lac Gene Fusions to Study Regulation of Tyramine Oxidase,Which is Involved in Derepression of Latent Arylsulfatase in Escherichia coli

Strains with lac fused to each of the arylsulfatase (ats) and tyramine oxidase (tyn) operons in Escherichia coli were isolated. Synthesis of β-galactosidase in strains with tyn:: lac fusions was induced by tyramine, histamine, tryptamine, dopamine and octopamine, and the induction of the tyn operon was subject to catabolite and ammonium repressions. These repressions were relieved when the cells were grown with a poor carbon or nitrogen source. No arylsulfatase activity is detected in E. coli strains. Synthesis of β-galactosidase in strains with ats:: lac fusions was repressed by sulfur compounds. The repression was relieved by monoamine compounds, which induced tyramine oxidase synthesis. The inhibition of tyramine oxidase activity by cysteine resulted in a decrease of the derepressed synthesis of β-galactosidase in the ats:: lac fusion. Repressing and derepressing conditions for the tyn operon prevented and stimulated, respectively, expression of the ats operon. Thus, the expression of latent arylsulfatase in E. coli seems to be regulated by expression of the tyn operon.     

Origin of the main class of repetitive DNA within selected Pennisetum species

In an attempt to identify relationships among genomes of the allotetraploid Pennisetum purpureum Schumach and closely related Pennisetum species with which it can be successfully hybridized, repetitive DNA sequences were examined. Digestion with KpnI revealed two highly repetitive fragments of 140 by and 160 bp. The possibility that these sequences could be used as genome markers was investigated. Average sequences were determined for the 140 by and 160 by KpnI families from P. purpureum and P. squamulatum Fresen. Average sequences (based upon four or five repeats) were determined for the P. glaucum (L.) R. Br. 140 by KpnI family and the diploid P. hohenackeri Hochst. ex Steud. 160 bp KpnI family. The average sequences of the 160 by KpnI families in P. purpureum and P. squamulatum differ by only nine bases. The 140 by KpnI families of the three related species, P. purpureum, P. squamulantum, and P. glaucum are nearly identical, and thus likely represent a recent divergence from a common progenitor or a common genome. Each repetitive sequence may contain internal duplications, which probably diverged following amplification of the original sequence. The 140 by KpnI repeat probably evolved from the 160 by KpnI repeat since the missing 18 by segment is part of the internal duplication that is otherwise conserved in the subrepeats. Tandemly arrayed repetitive sequences in plants are likely to be composed of subrepeats which have been duplicated and amplified.Florida Aqricultural Experiment Station series #R-02758