酵母的不同显色法的研究

在多年采集分离酵母菌的基础上,本文报道其中43属的600多株主要与担子菌有关的酵母及其他酵母的DBB反应,其中某些菌以往尚未测定过,从而广泛比较了担子菌酵母、子囊菌酵母与某些类酵母的区别。此外在方法上,摸索了其他未见报道的重氮盐的显色效果,发现固红B盐对布掷孢酵母(Bulleta Derx)的反应比DBB更灵敏。同时试验了热碱·乙醇处理细胞的快速DBB测试法,用此法测定某些疑难菌株,结果稳定,可大大缩短测试周期,并适用于多毛有气生菌丝的菌类。     

Taxonomic relationships of Geotrichum flavo-brunneum

Geotrichum flavo-brunneum Miller, Giddens et Foster shows both basidiomycetous (viz. the presence of urease and the high %G+C of DNA) and ascomycetous (viz. the carbohydrate composition) affinities. The study of the cell-wall ultrastructure, the hyphal branching and the Diazonium Blue B colouration points to a relationship with anamorphs of Ascomycetes.     

Key to the species of Hyphozyma (yeast-like Hyphomycetes) and description of H. roseonigra sp. nov.

The new species, Hyphozyma roseonigra, characterized by pink colonies, budding cells with minute annellated zones and brown, septate hyphae, is described. It is non-fermentative, shows no colouration with Diazonium Blue B, and has an ascomycete-type cell wall ultrastructure. A key to the accepted species and varieties of Hyphozyma is given.     

酵母各属间颜色反应、尿素酶活性和发酵力的比较

本文对比了28个属、37个种、74株酵母的颜色反应、分解尿素能力以及发酵力的关系,并讨论了这些特性与其它特征(如DNA碱基组成等)的一致性。这种一致性说明了一些无孢子酵母的亲缘关系。     

Carbohydrate patterns ofCandida,Cryptococcus andRhodotorula species

Within the genusCandida three distinct groups are recognized on the basis of carbohydrate patterns of intact whole cell hydrolyzates. In the first, ascomycetous, group mannose is dominant, while rhamnose, fucose and xylose are absent; this is indicative of an affinity with endomycetous families. Among the basidiomycetous representatives, two groups can be recognized. One group is usually characterized by the presence of xylose and has a low mannose content. The pattern is typical for Cryptococcales and Tremellales (e.g.,Cryptococcus, Trichosporon, Bullera andTremella). The other basidiomycetous group is characterized by the presence of fucose and/or rhamnose with significant amounts of mannose. This pattern is characteristic for Sporobolomycetaceae.     

Shifts in community composition provide a mechanism for maintenance of activity of soil yeasts in the presence of elevated copper levels

Soil dilution plates were prepared from different soil samples using a solid synthetic selective medium containing (i). glucose as carbon source, (ii). thymine as nitrogen source, (iii). vitamins, (iv). minerals, and (v). chloramphenicol as antibacterial agent. Using the Diazonium Blue B colour reaction, it was found that both ascomycetous and basidiomycetous yeasts were able to grow on this medium. Subsequently, the medium was used to enumerate yeasts in soil microcosms prepared from four different soil samples, which were experimentally treated with the fungicide copper oxychloride, resulting in copper (Cu) concentrations of up to 1000 ppm. The selective medium supplemented with 32 ppm of Cu was used to enumerate Cu-resistant yeasts in the microcosms. The results showed that the addition of Cu at concentrations >or=approximately 1000 ppm did not have a significant effect on total number of yeasts in the soil. Furthermore, it was found that Cu-resistant yeasts were present in all the soil samples, regardless of the amount of Cu that the soil was challenged with. At the end of the incubation period, yeasts in the microcosms with zero and approximately 1000 ppm of additional Cu were enumerated, isolated, and identified with sequence analyses of the D1/D2 600-650 bp region of the large subunit of ribosomal DNA. Hymenomycetous species dominated in the control soil, while higher numbers of the urediniomycetous species were found in the soil that received Cu. These observations suggest that urediniomycetous yeasts may play an important role in re-establishing overall microbial activity in soils, following perturbations, such as the addition of Cu-based fungicides.     

Contacts between the cells in bacterial colonies

The interaction of cells in microbial colonies has been studied by electron-microscopic techniques. Two types of contacts between cells have been found to exist in the colonies of Gram-negative bacteria of the genera Escherichia, Shigella and Salmonella: close cell adhesion due to the fusion of cell-wall outer membranes and the formation of intersections consisting of membranous tubules. At the sites of close adhesion the fusion of cytoplasmic and outer membranes have been found to occur in Bayer's zones. In the colonies of Gram-positive bacteria of the genera Staphylococcus and Brevibacterium only one type of contacts has been revealed: the fusion of the peptidoglycan layers of the cell walls. The results of this study indicate that in colonies bacteria are not completely isolated; their interaction leads to the formation of a three-dimensional structure denoted as a cooperative cell system.     

Yeast strains from the Schirmacher Oasis,Antarctica

Summary Soil samples from the Schirmacher Oasis of Antarctica were examined for the presence of yeasts. The number of yeast cells in the samples varied between 600 and 3000 g of wet soil. Eight pure cultures were obtained. All of the eight isolates were nonfermentative and all but one was Diazonium Blue B (DBB)-positive, indicating their basidiomycetous affinity. Based on their morphology, reproductive behavior, growth at different temperatures and salt concentrations, nutritional characteristies and various biochemical tests, all the eight cultures have been identified. Three of them are red yeasts, Rhodotorula rubra, one Bullera alba, one a dimorphic, Candida humicola and one Candida famata. The remaining two cultures have been tentatively identified as Candida ingeniosa and Candida auriculariae.     

Simple Detection of Xylosidase Activity in Single Colonies,Using 1-Naphthyl-β-d-xylopyranoside

Since the xylosidase of Bacillus pumilus hydrolyzed 1-naphthyl-β-d-xylopyranoside (naphthyl-X) to produce xylose and 1-naphthol and a chromogenic azo compound is produced by coupling 1-naphthol and Fast Blue Salt B, a simple method for detection of xylosidase activity in single colonies was studied. Escherichia coli JM109 carrying the xylosidase gene of B. pumilus was cultivated at 37°C for 18 h on an LB plate containing 0.5 mg/ml naphthyl-X, and then the plate was overlaid with 3 ml of a top layer containing 24 mg of agar and 6 mg of Fast Blue Salt B. After incubation of the plate at 37°C for 1 h, each colony became reddish-brown. Even a small colony with the xylosidase on the plate was easily distinguished from colonies without the enzyme.     

Immunoelectrophoretic analysis of Streptococcus agalactiae serotype Ia antigens

Rabbit antibodies to heat-killed whole cells of Streptococcus agalactiae serotype Ia were used to establish an antigen map using Triton X-100 sonicates of homologous cells and crossed immunoelectrophoresis. A total of 11 antigens were identified but the density of immunoprecipitates was varied and only seven could be reliably detected, one of which dominated the immunoprecipitate pattern by its intensity. The antigens were partially characterized by immunological, chemical and cell-location methods. Five of the antigens contained carbohydrate and two of those were sensitive to trypsin and probably represent cell-wall compounds. Of the three most prominent antigens, one was surface located and represented the type and shared type antigens (Iabc), one was a cell-wall carbohydrate and very sensitive to periodate, and one was a protein/carbohydrate complex which was heat-labile and trypsin sensitive. Group B epitopes were detected in three immunoprecipitates. Cross-reactions between type Ia and other serotypes and streptococci were recorded.     

Assessing coral bleaching and recovery with a colour reference card in Watamu Marine Park,Kenya

With this study we estimated the changes in colour, bleaching and mortality of coral colonies from February to December 2007, using the colour reference card method. The study was developed in the Watamu Marine Park lagoon (Kenya), bridging the local summer when seawater temperatures were highest and coral bleaching risk was at its maximum. Seven coral genera were selected, and their colour recorded using a colour reference card (Coral Watch card). Seven different scenarios of bleaching and mortality were observed, varying among the coral genera and between two species in the genus Pocillopora. Twenty percent of the colonies bleached, of which 50% died. Only 15% of the coral that did not bleach died. Branching genera had a higher bleaching incidence than massive and sub-massive genera. Pocillopora showed the highest bleaching susceptibility, followed by Acropora, and the highest level of mortality. Of the two species of Pocillopora considered in this study, P. eydouxi showed higher bleaching and mortality levels, while P. verrucosa bleached less and experienced only partial mortality. Our results evidenced different patterns of coral bleaching and mortality which were easily and clearly detected with the colour card method during both bleaching and a post-bleaching events.     

Mechanism of the Selective Action of Eosin-Methylene-Blue Agar on the Enteric Group

The actual mechanism of the differentiation of lactose-fermenting and non-lactose-fermenting organisms on eosin-methylene-blue medium is not reported in the literature. The present study is an attempt to elucidate this problem.

The color of colon forms on E.M.B. agar was found to depend on two factors: (1) the reaction of eosin with methylene blue to form a dye compound of either acidic or neutral nature, and (2) the production, by lactose-fermenting colonies, of a sufficiently low pH so that this dye compound is taken up by individual cells of the colony. Non-lactose-fermenting organisms are not colored because the compound is not taken up in alkaline reaction.

An explanation is offered to account for the occasional blue colonies found on E.M.B. medium. It is suggested that these colonies form a relatively high pH and thus cause slight dissociation of the compound. This dissociation would allow independent staining of the colonies by methylene blue.     

Selenium tolerance of yeasts

Selenium tolerance of yeasts widely varies: the growth of some yeasts can be inhibited by a selenium concentration as low as 10(-4) M, whereas others can grow in the presence of 10(-1) M selenium. Homogeneous yeast taxa are characterized by a certain level of selenium tolerance, and heterogeneous taxa show a variable level of tolerance to selenium. In general, ascomycetous yeasts are more tolerant to selenium than basidiomycetous yeasts. Among the ascomycetous yeasts, the genera Dekkera and Schizosaccharomyces exhibited the lowest and the species Candida maltosa, Hanseniaspora valbyensis, Kluyveromyces marxianus, and Yarrowia lipolytica the highest tolerance to selenium. Among the basidiomycetous yeasts, the genera Bullera, Cryptococcus, and Holtermannia showed the lowest and the species Cryptococcus curvatus, Cr. humicola, and Trichosporon spp. the highest tolerance to selenium. The selenium tolerance of yeasts depends on the composition of the growth medium, in particular, on the presence of sulfate, sulfur-containing amino acids, and glutamine in the medium.     

Colour polymorphism in the intertidal snail Littorina rudis Maton

The tictors affecting the variation of shell colour morph frequencies of the intertidal snail Littorina rudis Maton have been examined using ordination and correlation techniques. The major gradient underlying variation in shell colour is related to habitat type and structure. Dark, patterned shells are characteristic of cliff and salt marsh habitats whilst light, unpatterned shells reach high frequencies on boulder shores. Colour morphs do not differ significantly in shell thickness and between-shore variation in colour morph frequencies cannot be directly attributed to habitat dilterences in the risk of shell injury, but to other factors associated with habitat type and structure, e.g. parasitism. It is suggested that the maintenance of shell colour polymorphism in L. rudis is probably mediated by selection on pleiotropic characters rather than shell colour alone.     

Blood Cell Ultrastructure of the Ascidian Botryllus schlosseri L. II. Pigment Cells

Colonies of Botryllus schlosseri L., bred in the laboratory and genetically selected as regards the blue and/or reddish pigments, were used. The following phenotypes were investigated under the electron microscope: (a) blue colonies without reddish pigment; (b) reddish colonies without blue pigment; (c) colonies with both blue and reddish pigments; (d) colonies with neither blue nor reddish pigments. In the pigmented colonies, a specialized blood pigment cell type was recognized that, in giant membrane-limited vacuoles, contained a great number of granules. In general, the granules were similar in size, not individually limited by a membrane and were made up with electrondense material often arranged in concentric rings. Although there could be some variability within the same cell, in each phenotype the granules displayed a characteristic pattern so that the differences in colour of the granules, as seen in vivo, were paralleled by differences in the ultrastructural architecture. In the unpigmented colonies also, granulated vacuolar cells, rare in number but morphologically comparable to the pigment cells, were seen. On the basis of these results, the hypothesis of the existence of a prospective pigment cell and of a common origin for all the pigment cells of B. schlosseri is discussed.     

Carbohydrate composition and taxonomy of Geotrichum,Trichosporon and allied genera

The yeast-like genera Geotrichum and Trichosporon are heterogeneous and are related with anamorphs of both ascomycetous and basidiomycetous fungi. A rearrangement can be obtained using carbohydrate composition of intact cells, studied with the aid of gas-liquid chromatography.The genus Geotrichum is restricted to ascomycetous species with a dominance of galactomannans, whereas Trichosporon is reserved for basidiomycete-like, xylose-containing species. Consequently, some new combinations are introduced in both genera. Representatives of related genera are included for comparison: e.g. Dipodascus, Hyphopichia, Cryptococcus and Filobasidium.     

Reflections on the genus Vanakripa, and a description of V. ellipsoidea sp. nov

The genus Vanakripa (hyphomycetes) is reviewed based on the examination of type specimens, and V. ellipsoidea sp. nov. is described on submerged wood from Hong Kong. Vanakripa is characterized by punctiform sporodochial colonies, micronematous conidiogenous cells and pigmented conidia with vermiform separating cells. Vanakripa is compared with similar genera, and a synopsis of its morphological characters is provided.     

Three new anascosporic genera of the Saccharomycotina: Danielozyma gen. nov., Deakozyma gen. nov. and Middelhovenomyces gen. nov

Three new non-ascosporic, ascomycetous yeast genera are proposed based on their isolation from currently described species and genera. Phylogenetic placement of the genera was determined from analysis of nuclear gene sequences for D1/D2 large subunit rRNA, small subunit rRNA, translation elongation factor-1α and RNA polymerase II, subunits B1 and B2. The new taxa are: Deakozyma gen. nov., type species Deakozyma indianensis sp. nov. (type strain NRRL YB-1937, CBS 12903); Danielozyma gen. nov., type species Danielozyma ontarioensis comb. nov. (type strain NRRL YB-1246, CBS 8502); D. litseae comb. nov. (type strain NRRL YB-3246, CBS 8799); Middelhovenomyces gen. nov., type species Middelhovenomyces tepae comb. nov. (type strain NRRL Y-17670, CBS 5115) and M. petrohuensis comb. nov. (type strain NRRL Y-17663, CBS 8173).     

Anatomy and lignin distribution in reaction phloem fibres of several Japanese hardwoods

Background and Aims Although tension wood formation and the structure of gelatinous fibres (G-fibres) have been widely investigated, studies of the influence of the reaction phenomenon on phloem fibres have been few and incomplete in comparison with those of xylem wood fibres. This study was undertaken to clarify the influence of stem inclination on phloem fibres using several Japanese hardwood species that produce different G-fibre types in tension wood. Methods Eight hardwood species were inclined at 30-45° at the beginning of April. Specimens were collected in July and December. The cell-wall structure and lignin distribution of phloem fibres on both the tension and opposite sides were compared by light microscopy, ultraviolet microscopy, confocal laser scanning microscopy after staining with acriflavine, and transmission electron microscopy after staining with potassium permanganate. Key Results Three types of changes were found in tension-side phloem fibres: (1) increases in the proportion of the syringyl unit in lignin in the S(1) and S(2) layers and compound middle lamella (Cercidiphyllum japonicum), (2) formation of unlignified gelatinous layers (Melia azedarach and Acer rufinerve) and (3) increases in the number of layers (n) in the multi-layered structure of S(1) + S(2) + n (G + L) (Mallotus japonicus). Other species showed no obvious change in cell-wall structure or lignin distribution. Conclusions Phloem fibres of the tree species examined in our study showed three types of changes in lignin distribution and cell-wall structure. The reaction phenomenon may vary with tree species and may not be closely related to G-fibre type in tension wood.     

Yeasts in an industrial malting ecosystem

The malting ecosystem consists of two components: the germinating cereal grains and the complex microbial community. Yeasts and yeast-like fungi are an important part of this ecosystem, but the composition and the effects of this microbial group have been largely unknown. In this study we surveyed the development of yeasts and yeast-like fungi in four industrial scale malting processes. A total of 136 malting process samples were collected and examined for the presence of yeasts growing at 15, 25 and 37°C. More than 700 colonies were isolated and characterized. The isolates were discriminated by PCR-fingerprinting with microsatellite primer (M13). Yeasts representing different fingerprint types were identified by sequence analysis of the D1/D2 domain of the 26S rRNA gene. Furthermore, identified yeasts were screened for the production of α-amylase, β-glucanase, cellulase and xylanase. A numerous and diverse yeast community consisting of both ascomycetous (25) and basidiomycetous (18) species was detected in the various stages of the malting process. The most frequently isolated ascomycetous yeasts belonged to the genera Candida, Clavispora, Galactomyces, Hanseniaspora, Issatchenkia, Pichia, Saccharomyces and Williopsis and the basidiomycetous yeasts to Bulleromyces, Filobasidium, Cryptococcus, Rhodotorula, Sporobolomyces and Trichosporon. In addition, two ascomycetous yeast-like fungi (black yeasts) belonging to the genera Aureobasidium and Exophiala were commonly detected. Yeasts and yeast-like fungi produced extracellular hydrolytic enzymes with a potentially positive contribution to the malt enzyme spectrum. Knowledge of the microbial diversity provides a basis for microflora management and understanding of the role of microbes in the cereal germination process.