Individual discrimination in the big-clawed snapping shrimp, Alpheus heterochelis

Rahman et al. (Rahman, N., Dunham, D.W. and Govind, C.K. (2001). Mate recognition and pairing in the big-clawed snapping shrimp, Alpheus herterochelis. Mar. Fresh. Behav. Physiol., 34, 213-226.) demonstrated discrimination by snapping shrimp between former mates and unfamiliar conspecifics, but did not test individual discrimination. In the present study, snapping shrimp showed discrimination between familiar and unfamiliar same-sex conspecifics by preferentially entering that arm of a Y-maze leading to familiar individuals. Furthermore, after being exposed to water from the home tanks of unknown individuals, they later showed an elevated response to this water, if the direction from which the water came into their tank was changed to be novel. This indicates that test subjects associated a familiar chemical stimulus with its location in the environment. This discrimination could only have been made if that chemical signature were recognised as different from that of another chemically familiar individual. This result also demonstrates that the water surrounding an individual contains sufficient (chemical) information to allow discrimination of one individual from another.     

Individual discrimination in the big-clawed snapping shrimp,Alpheus heterochelis

Rahman et al. (Rahman, N., Dunham, D.W. and Govind, C.K. (). Mate recognition and pairing in the big-clawed snapping shrimp, Alpheus herterochelis. Mar. Fresh. Behav. Physiol., 34, 213–226.) demonstrated discrimination by snapping shrimp between former mates and unfamiliar conspecifics, but did not test individual discrimination. In the present study, snapping shrimp showed discrimination between familiar and unfamiliar same-sex conspecifics by preferentially entering that arm of a Y-maze leading to familiar individuals. Furthermore, after being exposed to water from the home tanks of unknown individuals, they later showed an elevated response to this water, if the direction from which the water came into their tank was changed to be novel. This indicates that test subjects associated a familiar chemical stimulus with its location in the environment. This discrimination could only have been made if that chemical signature were recognised as different from that of another chemically familiar individual. This result also demonstrates that the water surrounding an individual contains sufficient (chemical) information to allow discrimination of one individual from another.     

A comparative study by serial electron microscopy of neuromuscular junctions in the dimorphic claws of the snapping shrimp, Alpheus heterochelis

We compared the neuromuscular junctions on the main closer muscle in the first pair of chelipeds in the snapping shrimp Alpheus heterochelis by serial section electron microscopy. We sought an ultrastructural basis for the different behavioral and physiological functions of these dimorphic claws and for the role of the nervous system in claw transformation. We were unable to detect any statistically significant morphological differences between the junctions. Further, we found the muscle fiber populations and filament arrangements, as well as the electrical properties of the fibers, to be more homogeneous and similar to each other in A. heterochelis than those reported for another species, A. armillatus. We consider our results in light of recent data on the anatomy and electrical properties of the motor neurons within the CNS and conclude that the neural trigger for claw transformation involves factors not revealed by conventional electron microscopy.     

Changes in myofibrillar gene expression during fiber-type transformation in the claw closer muscles of the snapping shrimp, Alpheus heterochelis

Isotopes of a number of crustacean myofibrillar proteins have been identified with sodium dodecyl sulfate-polyacrylamide electrophoresis, and their distribution in muscles of the snapping shrimp has been examined. Fast-slow differences in distribution have been observed for myosin light chains and tropomyosin. In contrast, three troponin T subunits have been resolved, each specific to one of the three muscles examined. This result suggests that expression of crustacean contractile proteins is not accomplished by a simple coexpression of a battery of slow or fast isotopes. In addition, the expression of these proteins was examined during the quasi-developmental fiber-type transition of the main claw closer muscle during the reversal of claw asymmetry in response to the loss of the large snapper appendage. The changes observed appear similar to the cross-innervation induced changes in gene expression of vertebrate muscle.     

Post-autotomy claw regrowth and functional recovery in the snapping shrimp Alpheus angulosus

The ability to regenerate lost tissues, organs or whole body parts is widespread across animal taxa; in some animals, regeneration includes transforming a remaining structure to replace the one that was lost. The transformation of one limb into another involves considerable plasticity in morphology, physiology and behavior, and snapping shrimp offer excellent opportunities for studying this process. We examined the changes required for the transformation of the small pincer to a mature snapping claw in Alpheus angulosus. First molt claws differ from mature claws in overall shape as well as in morphology related to snapping function; nonetheless, shrimp with first molt claws do produce snaps. While most shape variables of second molt claws do not differ significantly from mature claws, the plunger (structure required for snap production) does not reach mature size until the third molt for females, or later for males. Thus, the pincer claw can be transformed into a functional snapping claw in one molt, although both the underlying morphology and superficial shape are not fully regenerated at this stage. The rapid production of a functional snapping claw that we observe in this study suggests that this particular function is of significant importance to snapping shrimp behavior and survival.     

Mitochondrial pseudogenes are pervasive and often insidious in the snapping shrimp genus Alpheus

Here we show that multiple DNA sequences, similar to the mitochondrial cytochrome oxidase I (COI) gene, occur within single individuals in at least 10 species of the snapping shrimp genus Alpheus. Cloning of amplified products revealed the presence of copies that differed in length and (more frequently) in base substitutions. Although multiple copies were amplified in individual shrimp from total genomic DNA (gDNA), only one sequence was amplified from cDNA. These results are best explained by the presence of nonfunctional duplications of a portion of the mtDNA, probably located in the nuclear genome, since transfer into the nuclear gene would render the COI gene nonfunctional due to differences in the nuclear and mitochondrial genetic codes. Analysis of codon variation suggests that there have been 21 independent transfer events in the 10 species examined. Within a single animal, differences between the sequences of these pseudogenes ranged from 0.2% to 20.6%, and those between the real mtDNA and pseudogene sequences ranged from 0.2% to 18.8% (uncorrected). The large number of integration events and the large range of divergences between pseudogenes and mtDNA sequences suggest that genetic material has been repeatedly transferred from the mtDNA to the nuclear genome of snapping shrimp. Unrecognized pseudogenes in phylogenetic or population studies may result in spurious results, although previous estimates of rates of molecular evolution based on Alpheus sister taxa separated by the Isthmus of Panama appear to remain valid. Especially worrisome for researchers are those pseudogenes that are not obviously recognizable as such. An effective solution may be to amplify transcribed copies of protein-coding mitochondrial genes from cDNA rather than using genomic DNA.     

Snapping behaviour in intraspecific agonistic encounters in the snapping shrimp (Alpheus heterochaelis)

During intraspecific agonistic encounters in snapping shrimp (Alpheus heterochaelis) the behaviour of the snapper, emitting a fast water jet by very rapid closure of the large modified snapper claw, and the receiver was analysed by single frame video analysis before, during, and after the snap. During snapping the opponents usually face each other. Snapping is most frequently preceded by touch of frontal appendages. The snapping animal keeps its snapper claw slightly across the midline, shielding frontal body parts, and its tailfan bent downwards. The mean claw cocking duration (generating muscle tension) before snapping amounts to about 500 ms. In 58% of the snaps, the snapper claw pointed at the opponent, its claws, densely covered with sensory hairs, representing the main target of the water jet. The mean distance for these directed snaps was 0.9 cm, while undirected snaps were emitted from larger distances of on average 3.4 cm. The snapper usually withdraws immediately after snapping, the receiver approaches. Initial snaps are often answered by return snaps and both are emitted from smaller distances and hit more often than subsequent snaps.     

Signaling via water currents in behavioral interactions of snapping shrimp (Alpheus heterochaelis)

The snappping shrimp Alpheus heterochaelis produces a variety of different water currents during intraspecific encounters and interspecific interactions with small sympatric crabs (Eurypanopeus depressus). We studied the mechanisms of current production in tethered shrimp and the use of the different currents in freely behaving animals. The beating of the pleopods results in strong posteriorly directed currents. Although they reach rather far, these currents show no distinctions when directed toward different opponents. Gill currents are produced by movements of the scaphognathites (the exopodites of the second maxillae) and can then be deflected laterally by movements of the exopodites of the first and second maxillipeds. These frequent but slow lateral gill currents are most probably used to enhance chemical odor perception. The fast and focused, anteriorly directed gill currents, however, represent a powerful tool in intraspecific signaling, because they reach the chemo- and mechanosensory antennules of the opponent more often than any other currents and also because they are produced soon after previous contacts between the animals. They may carry chemical information about the social status of their producers since dominant shrimp release more anterior gill currents and more water jets than subordinate animals in intrasexual interactions.     

Size at sexual maturity,egg number and reproductive output of the snapping shrimp Alpheus euphrosyne euphrosyne De Man, 1897

Abstract

Aspects of the reproductive biology of snapping shrimp Alpheus euphrosyne euphrosyne inhabiting a tropical estuary were studied between August 2007 and July 2008 by examining 1309 females of 8.5–21.5 mm carapace length. Although the occurrence of ovigerous females was noted from October, the main breeding season extended from January to March. Size at 50% sexual maturity was estimated as 10.6±1.40 mm CL. Number of eggs per brood ranged from 141 to 1553 in females of 11.2 to 19.2 mm CL and mean absolute fecundity was estimated as 480±272 eggs. Regressions of log egg number on log total length, log carapace length and log weight revealed isometric relationships (p <0.01). Results of ANOVA revealed significant variation between mean short and long axes of eggs among five embryo developmental stages (P <0.05). The estimated egg batch 33 volume ranged from 4.99 to 32.09 mm³ with a mean of 12.44 mm³. Estimates of reproductive output from 41 females ranged between 8.21 to 31.25% with a mean value of 18.55±5.81.     

Genetic,ecological, and behavioural divergence between two sibling snapping shrimp species (Crustacea: Decapoda: Alpheus)

Examination of genetic and ecological relationships within sibling species complexes can provide insights into species diversity and speciation processes. Alpheus angulatus and A. armillatus, two snapping shrimp species with overlapping ranges in the north-western Atlantic, are similar in morphology, exploit similar ecological niches and appear to represent recently diverged sibling species. We examined phylogenetic and ecological relationships between these two species with: (i) sequence data from two mitochondrial genes (16S rRNA and COI); (ii) data on potential differences in microhabitat distribution for A. armillatus and A. angulatus; and (iii) data from laboratory experiments on the level of reproductive isolation between the two species. DNA sequence data suggest A. armillatus and A. angulatus are sister species that diverged subsequent to the close of the Isthmus of Panama, and that haplotype diversity is lower in A. armillatus than in A. angulatus. Both species are distantly related to A. heterochaelis and A. estuariensis, two species with which A. angulatus shares some similarities in coloration. Ecological data on the distribution of A. angulatus and A. armillatus from two locations revealed differences in distribution of the two species between habitat patches, with each patch dominated by one or the other species. However, there was no apparent difference in distribution of the two species within habitat patches with respect to microhabitat location. Ecological data also revealed that heterospecific individuals often occur in close proximity (i.e. within metres or centimetres) where sympatric. Behavioural data indicated that these species are reproductively isolated, which is consistent with speciation in transient allopatry followed by post-divergence secondary contact. Our data further resolve taxonomic confusion between the sibling species, A. armillatus and A. angulatus, and suggest that sympatry in areas of range overlap and exploitation of similar ecological niches by these two recently diverged species have selected for high levels of behavioural incompatibility.     

Flow visualisation and high speed video analysis of water jets in the snapping shrimp (Alpheus heterochaelis)

Snapping shrimp (Alpheus heterochaelis) produce a fast, well-focused water jet by rapid closure of their specialised snapper claw. As shown previously, water jets may injure the opponent in interspecific encounters (e.g. with small crabs) although no damage was observed in intraspecific encounters. For conspecific receivers the jet represents a potential hydrodynamic signal and can be analysed with the help of mechanosensory hairs. To gain more insight in the biophysical characteristics of the water jet we visualised and analysed jets of tethered snapping shrimp using standard and high speed video recordings. Water jet width increases with increasing distance from the snapper claw tip, and both width and distance increase with increasing snapper claw size. Water jet distances do not increase with increasing claw cocking duration (building up muscle tension) but medium cocking durations of about 550 ms result in longest distances. Mean water jet velocity is 6.5 m s⁻¹ shortly after claw closure but rapidly decreases subsequently. At the mean distance between snapping conspecifics (9 mm) water jet velocities produced by snapping shrimp with larger snapper claws are significantly higher than those of animals with smaller claws. Interestingly, males with equal snapper claw size as females produce significantly faster water jets. Accepted: 31 March 1999     

Evidence for three major clades within the snapping shrimp genus Alpheus inferred from nuclear and mitochondrial gene sequence data

The snapping shrimp genus Alpheus is among the most diverse of caridean shrimps, and analyses of taxa separated by the Isthmus of Panama have been used to estimate rates of molecular evolution. Although seven morphological groups have been informally suggested, no formal phylogenetic analysis of the genus has been previously attempted. Here we infer the phylogenetic relationships within Alpheus using sequence data from two nuclear genes, glucose-6-phosphate isomerase and elongation factor-1alpha, and from the mitochondrial gene cytochrome oxidase I. Three major clades corresponding to previously noted morphological features were identified. Discrepancies between earlier informal morphological groupings and molecular analyses largely consisted of species whose morphologies were not entirely typical of the group to which they had been assigned. The traditional placements of shrimp with highly sessile lifestyles and consequently simplified morphologies were also not supported by molecular analyses. Phylogenies for Alpheus suggest that specialized ecological requirements (e.g., symbiotic associations and estuarine habitats) and modified claw morphologies have evolved independently several times. These new analyses also support the sister species status of transisthmian pairs analyzed previously, although very similar pairs were not always resolved with the more slowly evolving nuclear loci. In addition, six new cryptic species were identified in the course of these studies plus a seventh whose status remains to be determined.     

Molecular phylogeny reveals extensive ancient and ongoing radiations in a snapping shrimp species complex (Crustacea,Alpheidae, Alpheus armillatus)

Tropical marine habitats often harbor high biodiversity, including many cryptic taxa. Though the prevalence of cryptic marine taxa is well known, the evolutionary histories of these groups remain poorly understood. The snapping shrimp genus Alpheus is a good model for such investigations, as cryptic species complexes are very common, indicating widespread genetic diversification with little or no morphological change. Here, we present an extensive phylogeographic investigation of the diversified amphi-American Alpheus armillatus species complex, with geographic sampling in the Caribbean Sea, Gulf of Mexico, Florida, Brazil, and the tropical Eastern Pacific. Sequence data from two mitochondrial genes (16SrRNA and cytochrome oxidase I) and one nuclear gene (myosin heavy chain) provide strong evidence for division of the species complex into six major clades, with extensive substructure within each clade. Our total data set suggests that the A. armillatus complex includes no less than 19 putative divergent lineages, 11 in the Western Atlantic and 8 in the Eastern Pacific. Estimates of divergence times from Bayesian analyses indicate that the radiation of the species complex began ～10 MYA with the most recent divergences among subclades dating to within the last 3 MY. Furthermore, individuals from the six major clades had broadly overlapping geographic distributions, which may reflect secondary contact among previously isolated lineages, and have apparently undergone several changes in superficial coloration, which is typically the most pronounced phenotypic character distinguishing lineages. In addition, the extensive substructure within clades indicates a great deal of molecular diversification following the rise of the Isthmus of Panama. In summary, this investigation reflects substantial biodiversity concealed by morphological similarity, and suggests that both ancient and ongoing divergences have contributed to the generation of this biodiversity. It also underlines the necessity to work with the most complete data set possible, which includes comprehensive and wide-ranging sampling of taxa.     

The modality of the dominance signal in snapping shrimp (Alpheus heterochaelis) and the corresponding setal types on the antennules

Previous behavioural experiments showed that snapping shrimp lacking lateral antennular filaments, i.e. without chemosensory aesthetascs, lose the ability to distinguish between conspecifics that are inexperienced in fighting and former winners. A chemosensory dominance signal was assumed to be present, although other receptors unique to the lateral filaments may have been responsible for the behavioural changes. In the present study, the antennules of snapping shrimp were examined for differences between the lateral and medial antennule filaments to identify the modality of the dominance signal. We found six different types of setae and two types of pores. A new probably bimodal setal type is described, the broad long simple seta. Only the chemosensory aesthetascs and their associated hydrosensory companion setae are unique to the lateral filament. Thus we conclude that the dominance signal is chemical, because a hydrodynamic signal would be also received by the simple setae distributed on both filaments.     

Reproductive strategy of the snapping shrimp Alpheus armillatus H. Milne-Edwards, 1837 in the South Atlantic: fecundity,egg features,and reproductive output

Summary

The family Alpheidae, composed by shrimps of relatively small size, popularly known as snapping shrimps, is the one of the most diverse decapod groups. These shrimps are found worldwide and occur in tropical and subtropical waters, from the intertidal zone to great depths. We investigated reproductive aspects of Alpheus armillatus, in order to gather information on egg production, aiming to enhance knowledge of its reproductive strategies in a population in an intertidal area of the South Atlantic. Ovigerous females were collected under rocks, in May and July 2006 (dry season) and in November 2006 and March 2007 (rainy season). Egg production and reproductive output were analyzed and compared seasonally and during the period of embryonic development. Females measured on average 11.28 mm CL, with a mean of 763 eggs and 0.10 mm3 egg volume. The egg volume of this population was smaller than previous estimates for other species of snapping shrimps, but the mean egg number was higher. The volume of eggs doubled during the incubation period, but despite this increase, no significant loss of eggs was observed. Alpheus armillatus invests on average about 12% of body weight in reproduction. The proportional investment in egg production is significantly higher in the rainy season when compared with the dry season (17.9% vs 4.8%), correlated with higher temperatures and increased food availability at this time. Our results corroborated the hypothesis of a pattern of egg production influenced by environmental conditions and intraspecific variability among the family Alpheidae, as a function of the biogeographic region.     

The modality of the dominance signal in snapping shrimp (Alpheus heterochaelis) and the corresponding setal types on the antennules

Previous behavioural experiments showed that snapping shrimp lacking lateral antennular filaments, i.e. without chemosensory aesthetascs, lose the ability to distinguish between conspecifics that are inexperienced in fighting and former winners. A chemosensory dominance signal was assumed to be present, although other receptors unique to the lateral filaments may have been responsible for the behavioural changes. In the present study, the antennules of snapping shrimp were examined for differences between the lateral and medial antennule filaments to identify the modality of the dominance signal. We found six different types of setae and two types of pores. A new probably bimodal setal type is described, the broad long simple seta. Only the chemosensory aesthetascs and their associated hydrosensory companion setae are unique to the lateral filament. Thus we conclude that the dominance signal is chemical, because a hydrodynamic signal would be also received by the simple setae distributed on both filaments.     

Population structure,relative growth and morphological sexual maturity of the snapping shrimp Alpheus brasileiro Anker, 2012 (Caridea: Alpheidae) from the south-eastern coast of Brazil

The present study investigated the population structure of the snapping shrimp Alpheus brasileiro. We tested the hypotheses that the sex ratio of the population differs from the expected 1:1 and that the growth pattern differs between adults and juveniles and between sexes. Reproductive period, juvenile recruitment and morphological sexual maturity were estimated. Samples were collected in two periods. The first sampling occurred bimonthly from March 2013 to January 2014. The second sampling occurred monthly from April 2015 to March 2016. The population structure was determined based on the size-frequency distribution of different demographic categories. To analyse the relative growth, we measured the second pleuron length, major cheliped propodus length, major cheliped propodus width, major cheliped propodus height, appendix interna length, appendix masculina length. The results showed that the sex ratio did not differ from 1:1 (male:female). Reproduction and juvenile recruitment were continuous throughout the study period. The analysis of relative growth confirmed the hypothesis that males and females, and juveniles and adults, have different growth patterns, indicating distinct strategies of energy allocation. The estimated carapace length at the onset of morphological sexual maturity was 4.9?mm in males and 4.7?mm in females. The results obtained in this study are probably related to the monogamous social behaviour of A. brasileiro. Monogamy can influence demographic parameters such as sex ratio and the size at which males and females reach morphological sexual maturity.     

Complete mitochondrial genome of the Japanese snapping shrimp Alpheus japonicus (Crustacea: Decapoda: Caridea): Gene rearrangement and phylogeny within Caridea

The complete sequence of the mitochondrial genome of the Japanese snapping shrimp Alpheus japonicus Miers (Crustacea: Decapoda: Caridea) is presented here. A comparative analysis based on the currently available mitochondrial genomic data revealed many previously unknown characteristics of the mitochondrial genomes of caridean shrimps. The A. japonicus mitochondrial genome is 16487 bp long and contains the typical set of 37 metazoan genes. The gene arrangements in the mitochondrial genomes of four previously studied carideans (Macrobrachium rosenbergii, M. nipponense, M. lanchesteri and Halocaridina rubra) were found to be identical to the pancrustacean ground pattern; thus, it was considered that gene rearrangements probably did not occur in the suborder Caridea. In the present study, a translocation of the trnE gene involving inversion was found in Alpheus mitochondrial genomes. This phenomenon has not been reported in any other crustacean mitochondrial genome that has been studied so far; however, the translocation of one transfer RNA gene (trnP or trnT) was reported in the mitochondrial genome of Exopalaemon carinicauda. When the ratios of the nonsynonymous and synonymous substitutions rates (Ka/Ks) for the 13 protein coding genes from two Alpheus species (A. japonicus and A. distinguendus) and three Macrobrachium species (M. rosenbergii, M. nipponense, M. lanchesteri) were calculated, the Ka/Ks values for all the protein coding genes in Alpheus and Macrobrachium mitochondrial genomes were found to be less than 1 (between 0.0048 and 0.2057), indicating that a strong purification selection had occurred. The phylogenetic tree that was constructed based on the mitochondrial protein coding genes in the genomes of nine related species indicated that Palaemonidae and Alpheidae formed a monophyly and shared a statistically significant relationship, (Palaemonidae+Alpheidae)+Atyidae, at the family level.