Population genetic studies of the Atlantic halibut in the North Atlantic Ocean

Significant variation in frequency distribution of electrophoretically detectable protein variants between samples of Atlantic halibut Hippoglossus hippoglossus showed that the halibut from northern Norway and from the Faroes–Iceland–Greenland region may not belong to one panmictic population.     

Atlantic bryophytes in Scotland

Summary

A brief overview is given of the importance of Scotland for Atlantic bryophytes within Europe and worldwide. The life strategies of Atlantic species are discussed and the main habitats of Atlantic bryophytes listed. A consideration of the use of distribution data to identify ‘hotspots’ and sites for conservation is made. Grimmia britannica A.J.E. Smith and Marsupella profunda Lindb. are added to the list of Atlantic species in Britain and Ireland.     

Chromosome polymorphisms track trans‐Atlantic divergence and secondary contact in Atlantic salmon

Pleistocene glaciations drove repeated range contractions and expansions shaping contemporary intraspecific diversity. Atlantic salmon (Salmo salar) in the western and eastern Atlantic diverged >600,000 years before present, with the two lineages isolated in different southern refugia during glacial maxima, driving trans‐Atlantic genomic and karyotypic divergence. Here, we investigate the genomic consequences of glacial isolation and trans‐Atlantic secondary contact using 108,870 single nucleotide polymorphisms genotyped in 80 North American and European populations. Throughout North America, we identified extensive interindividual variation and discrete linkage blocks within and between chromosomes with known trans‐Atlantic differences in rearrangements: Ssa01/Ssa23 translocation and Ssa08/Ssa29 fusion. Spatial genetic analyses suggest independence of rearrangements, with Ssa01/Ssa23 showing high European introgression (>50%) in northern populations indicative of post‐glacial trans‐Atlantic secondary contact, contrasting with low European ancestry genome‐wide (3%). Ssa08/Ssa29 showed greater intrapopulation diversity, suggesting a derived chromosome fusion polymorphism that evolved within North America. Evidence of potential selection on both genomic regions suggests that the adaptive role of rearrangements warrants further investigation in Atlantic salmon. Our study highlights how Pleistocene glaciations can influence large‐scale intraspecific variation in genomic architecture of northern species.     

Hypoxia tolerance in Atlantic cod

Oxygen saturation levels that killed 50 and 5% of cod Gadus morhua over 96 h averaged 21·2 and 27·7%, respectively. No fish survived at 10% saturation and only a few survived at 16% saturation, whereas no mortality occurred at 34 and 40% oxygen saturation. Since metabolic rate and oxygen consumption increase with increasing temperature, we hypothesized that cod would be less tolerant to hypoxic conditions at 6 than at 2° C. However, temperature (2 and 6° C) had no measurable impact on cod survival. Small (mean & S.D.; 45·2 ± 4·2 cm) and large (57·5 ± 3·8 cm) cod had the same tolerance to hypoxia. At the end of the experiments, hypoxia had a significant effect on blood haematocrit, mean cellular haemoglobin content, liver lactate, plasma glucose and plasma lactate, but accounted for only a small fraction (< 10%) of the variation, except for plasma lactate which exhibited a strong response with concentrations increasing progressively with decreasing levels of oxygen saturation. Temperature had a significant effect on most variates in normoxia and hypoxia. Variates also affected by oxygen level showed significant interactions between oxygen and size or temperature effects. However, these interactions accounted for only a small proportion of the variation. Physiological parameters indicated that extending the duration of our tests beyond 96 h would not have changed our estimates of the lethal thresholds. Hypoxic conditions are a permanent feature of the deep waters of the Gulf of St Lawrence. This study shows that a significant portion of the benthic habitats in the Gulf are uninhabitable for cod which would be expected to avoid waters below 28% oxygen saturation.     

Provenance Of Atlantic Lingulid Brachiopods

Living lingulid brachiopods are ubiquitous in low-latitude, marine infaunas. Lingula occurs throughout the Pacific and Indian oceans with the only Atlantic species, L. parva, confined to West Africa. Glottidia is restricted to offshore America from Virginia to California and Peru, and is assumed to have descended from a Pacific Lingula during the early Tertiary. Lingulid organophosphatic shells differ structurally. That of Glottidia is characterizedby trellised rods (baculate); that of Indo-Pacific species of Lingula by spheroidal and rod-like microstructures (virgose); and that of L. parva by apatitic rods arranged as spherulites. A spherulitic fabric is unknown in fossil lingulids, but the distinction between GlottidiaLingula can be traced back to the Carboniferous, which accords with the deep molecular divergence between the two genera. The common occurrence of lingulids with baculate shells in European post-Palaeozoic sediments suggests that ancestral Glottidia entered the Atlantic by the Tethyan Current during the Late Cretaceous/early Cenozoic, and migrated into the Pacific before the formation of the Panama Isthmus. Penecontemporaneously, antecedents of L. parva possibly migrated from east Tethys along the trans-Saharan seaway.     

Evidence of Atlantic bluefin tuna spawning in the Bay of Biscay,north-eastern Atlantic

The spawning grounds of the Atlantic bluefin tuna (Thunnus thynnus) are traditionally considered to be the Gulf of Mexico (Gulf of Mexico) and the Mediterranean Sea (Mediterranean Sea). However, for the western Atlantic, unequivocal evidence of bluefin spawning outside the Gulf of Mexico has been shown. In this study we present the first records of genetically confirmed bluefin larvae in the southern Bay of Biscay (eastern Atlantic). These findings provide evidence of bluefin spawning activity outside the Mediterranean Sea, in the north-eastern Atlantic. However, our results suggest that the bluefin spawning in the Bay of Biscay is a sporadic phenomenon.     

Size-fractionated Primary Production in the South Atlantic and Atlantic Sectors of the Southern Ocean

Results are presented from size fractionated chlorophyll a (Chla) and primary production studies along a transect between Antarcticaand southern Africa during the second South African AntarcticMarine Ecosystem Study (SAAMES II), conducted in late australsummer (January to February) 1993. Total integrated Chl a alongthe transect was highest in the vicinity of the Marginal IceZone (MIZ) and Antarctic Polar Front (APF). At these stations,integrated Chl a biomass was always >25 mg Chl a m^–2and was dominated by microphytoplankton. Although nominal increasesinChl a biomass were also associated with the Subantarctic Front(SAF) and Subtropical Convergence (STC), total Chl a biomassin these regions was dominated by nanophytoplankton. Withinthe inter-frontal regions, total integrated Chl a biomass waslower, generally <25 mg Chl a m^–2, and was always dominatedby nanophytoplankton. An exception was found in the AgulhasReturn Current (ARC) where picophytoplankton dominated. Totaldaily integrated production along the transect ranged between60 and 436 mg C m^–2 day^–1. Elevated production rateswere recorded at stations occupied in the vicinity of the MIZand at all the major oceanic frontal systems. The contributionsof the various size fractions to total daily production displayedthe same spatial pattern as integrated biomass, with microphytoplanktonbeing the most important contributor in areas characterizedby elevated phytoplankton biomass. Outside these regions, nanophytoplanktondominated the total phytoplankton production. Again, an exceptionwas found in the ARC north of the STC where picophytoplanktondominated total production. There, the lowest production alongthe entire transect was recorded, with total daily integratedproduction always <90 mg C m^–2 day^–1. The increasedproduction rates recorded in the MIZ appeared to result fromincreased water column stability as indicated by a shallow mixed-layerdepth. Within the inter-frontal regions, the existence of adeep mixed layer appeared to limit phytoplankton production.Low silicate concentrations in the waters north of the APF mayalso have limited the growth of large microphytoplankton.     

Metapopulations and the Atlantic herring

Two opposing concepts of Atlantic herring, Clupea harengus L., population structure are critically reviewed with the objective of unifying these divergent views under the metapopulation concept. It is concluded that neither the discrete population concept nor the dynamic balance concept adequately explains all the data associated with herring population structure and dynamics, including meristic and morphometric measurements, life- history traits, homing, year-class twinning, and biochemical analyses. However, the available information does suggest that Atlantic herring population structure and dynamics are well described within the metapopulation concept. The example of sympatric seasonal-spawning populations is used to illustrate the strategy, opportunity and mechanism by which local population integrity and persistence are maintained within the adopted- migrant hypothesis. Local population integrity is maintained through behavioural isolation, i.e. repeat rather than natal homing to spawning areas, while local population persistence is ensured through the social transmission of migration patterns and spawning areas from adults to recruiting individuals     

Carotenoid dynamics in Atlantic salmon

Background  

Carotenoids are pigment molecules produced mainly in plants and heavily exploited by a wide range of organisms higher up in the food-chain. The fundamental processes regulating how carotenoids are absorbed and metabolized in vertebrates are still not fully understood. We try to further this understanding here by presenting a dynamic ODE (ordinary differential equation) model to describe and analyse the uptake, deposition, and utilization of a carotenoid at the whole-organism level. The model focuses on the pigment astaxanthin in Atlantic salmon because of the commercial importance of understanding carotenoid dynamics in this species, and because deposition of carotenoids in the flesh is likely to play an important life history role in anadromous salmonids.     

Oceanic bryophytes in Atlantic oakwoods

Summary

The oceanic bryophyte element of the vegetation of British and Irish Atlantic oakwoods is not only the richest bryophyte flora in Europe, it is also one of the richest bryophyte floras in the world. The oceanic climate and the buffering provided by the tree canopy are critical in maintaining the constant humidity and equable temperatures which provide the basis for this diversity. Though the initial impression of these woodlands is of a homogeneous green carpet over both rocks and trees, most good woodlands will have over 200 different species of moss and liverwort, many of which are very specific as regards micro-habitat. Within the woodlands, a recently glaciated landscape gives much exposed rock of different aspect, texture and chemistry, and also turbulent burns in deep ravines which enhance the humidity. These niches are exploited by different bryophyte communities which may contain a number of species that are very rare in European terms and for which we have a special responsibility. Any management plans for these woodlands should take account of this variety of micro-habitat, and monitoring of the effects on bryophyte populations of any resulting change in the structure of ground vegetation is vital.     

Lipids of North Atlantic krill

The seasonal variations in the total lipid content, lipid class composition, fatty acid composition, and fatty alcohol composition of Meganyctiphanes norvegica (M. Sars), Thysanoessa inermis (Kr?yer), and T. raschii (M. Sars) have been examined. The total lipid content was highest in the autumn and early winter months and lowest in the spring. In M. norvegica, triacylglycerols served as the only depot lipids, whereas in T. inermis and T. raschii triacylglycerols, wax esters, and glycerophospholipids varied in proportion to the total lipid content. This suggests that glycerophospholipids, as well as wax esters and triacylglycerols, constitute depot lipids in these species. Wax esters and glycerophospholipids were the dominating depot lipids in T. inermis, whereas triacylglycerols and glycerophospholipids were most important in T. raschii. Results suggest that non-depot glycerophospholipids may constitute 3.5-4.5% of the dry weight of the three species of krill examined. T. inermis and T. raschii, from the same catches, had very similar fatty acid compositions for each of the major lipid classes, with the exception of a few minor fatty acids. The major lipid classes in all three species showed complex seasonal variations in the content of the fatty acids that typically reflect the diet, particularly in the case of the triacylglycerols. The results suggest that all the species examined are more herbivorous during the summer than during the autumn and winter. M. norvegica seemed to be significantly more carnivorous than the two Thysanoessa species. The degree of incorporation of individual fatty acids from the diet is probably specific for each lipid class in each krill species. The proportion of polyenoic fatty acids in the glycerophospholipids and the proportion of monoenoic fatty acids in the wax esters may be of importance for the temperature adaptation of T. inermis and T. raschii.     

Changes in Northwest Atlantic Arctic and Subarctic conditions and the growth response of Atlantic salmon

There has been a systematic change in the weight at age of Atlantic salmon (Salmo salar L.) in the Northwest Atlantic that is related to climate variability. This relationship emerged from analyses of broad-scale measures of ocean surface thermal habitat, which show that expansion of the area bounding 4–8°C is associated with greater growth. To further elucidate the effect of the environment on salmon growth, time series of sea surface temperature (SST), sea ice coverage, chlorophyll concentration, net primary production and zooplankton abundance were examined temporally and spatially in relation to changes in the weight of salmon. SST and zooplankton data were extracted from in situ analyses, whereas sea ice and chlorophyll-based measures of productivity were collected with satellite sensors. Salmon growth was found to be unrelated to productivity at the base of the food chain but highly associated with thermal regime during winter and spring. Warming conditions during specific segments of the salmon life cycle have been associated with poor adult recruitment; yet, warming during others is beneficial to salmon growth and is assumed to increase reproductive output of spawning fish. Despite these positive influences, climate change will continue to erode the viability of salmon populations while the negative effects of warming on survivorship outweigh the benefits of any increase in reproductive output related to growth.     

Induction of Mx protein in Atlantic cod with poly I:C: immuno-cross reactive studies of antibodies to Atlantic salmon Mx with Atlantic cod

A polyclonal rabbit antiserum directed against the conserved region of the Atlantic salmon antiviral Mx1 protein was used to detect the putative Atlantic cod Mx protein using Western and dot blotting. A doublet band at about 75kDa and 65kDa was detected by Western blotting in kidney and spleen extracts of cod 3 and 4 days after i.p. injection with poly I:C but not in control fish injected with PBS. In blood leucocyte lysates, similar immunostaining could also be detected in Atlantic cod weakly after injection with PBS and more intensely after injection with poly I:C, suggesting some constitutive expression of Mx protein by leucocytes. Dot blot analysis showed that the Mx protein level was significantly higher in spleen, kidney, liver and gill of cod at least up to 4 days after injection with poly I:C when compared with the PBS-injected controls.