Differences in boldness are repeatable and heritable in a long‐lived marine predator

Animal personalities, composed of axes of consistent individual behaviors, are widely reported and can have important fitness consequences. However, despite theoretical predictions that life‐history trade‐offs may cause and maintain personality differences, our understanding of the evolutionary ecology of personality remains poor, especially in long‐lived species where trade‐offs and senescence have been shown to be stronger. Furthermore, although much theoretical and empirical work assumes selection shapes variation in personalities, studies exploring the genetic underpinnings of personality traits are rare. Here we study one standard axis of personality, the shy–bold continuum, in a long‐lived marine species, the wandering albatross from Possession Island, Crozet, by measuring the behavioral response to a human approach. Using generalized linear mixed models in a Bayesian framework, we show that boldness is highly repeatable and heritable. We also find strong differences in boldness between breeding colonies, which vary in size and density, suggesting birds are shyer in more dense colonies. These results demonstrate that in this seabird population, boldness is both heritable and repeatable and highlights the potential for ecological and evolutionary processes to shape personality traits in species with varying life‐history strategies.     

Effects of rearing conditions on natal dispersal processes in a long‐lived predator bird

Natal or prebreeding dispersal is a key driver of the functioning, dynamics, and evolution of populations. Conditions experienced by individuals during development, that is, rearing conditions, may have serious consequences for the multiple components that shape natal dispersal processes. Rearing conditions vary as a result of differences in parental and environmental quality, and it has been shown that favorable rearing conditions are beneficial for individuals throughout their lives. However, the long‐term consequences of rearing conditions on natal dispersal are still not fully understood in long‐lived birds. In this study, we aim to test the following hypotheses to address the relationship between rearing conditions and certain components of the natal dispersal process in Bonelli’s eagle (Aquila fasciata): (1) The body condition of nestlings depends on the quality of the territory and/or breeders; and (2) the survival until recruitment, (3) the age of recruitment, and (4) the natal dispersal distance (NDD) all depend on rearing conditions. As expected, nestlings reared in territories with high past productivity of chicks had better body condition, which indicates that both body condition and past productivity reflect the rearing conditions under which chicks are raised. In addition, chicks raised in territories with high past productivity and with good body condition had greater chances of surviving until recruitment. Furthermore, birds that have better condition recruit earlier, and males recruit at a younger age than females. At last, although females in good body condition exhibited higher NDD when they recruited at younger ages, this pattern was not observed in either older females or males. Overall, this study provides evidence that rearing conditions have important long‐term consequences in long‐lived birds. On the basis of our results, we advocate that conservation managers work actively in the promotion of actions aimed at improving the rearing conditions under which individuals develop in threatened populations.     

Haematological parameters do senesce in the wild: evidence from different populations of a long‐lived mammal

Increasing evidence of senescence has been reported from long‐term studies of wild populations. However, most studies have focused on life‐history traits like survival, reproduction or body mass, generally from a single intensively monitored population. However, variation in the intensity of senescence across populations, and to a lesser extent between sexes, is still poorly understood. In addition, the pattern of age‐specific changes in haematological parameters remains virtually unknown to date for any population of vertebrate living in the wild. Using repeated blood samples collected from known‐aged (2–15 years of age) roe deer (Capreolus capreolus) from two populations facing highly different environmental conditions, we filled the gap. In particular, we investigated age‐specific changes in haematocrit, albumin and creatinine. We reported clear evidence of senescence in all haematological parameters. Moreover, senescence patterns differed between sexes and populations. The rate of senescence was higher in males than in females for haematocrit with no site difference. On the other hand, the rate of senescence in creatinine was higher at Trois Fontaines than at Chizé with no sex difference. Our findings provide a first demonstration of age‐specific declines in haematological parameters in wild populations of large herbivores and show that the process of senescence in vertebrates is not restricted to body mass or fitness components. We also demonstrate that the senescence pattern of haematological parameters is context dependent and varies both between sexes and according to environmental conditions.     

A natural antipredation experiment: predator control and reduced sea ice increases colony size in a long‐lived duck

Anthropogenic impact on the environment and wildlife are multifaceted and far‐reaching. On a smaller scale, controlling for predators has been increasing the yield from local natural prey resources. Globally, human‐induced global warming is expected to impose severe negative effects on ecosystems, an effect that is expected to be even more pronounced in the scarcely populated northern latitudes. The clearest indication of a changing Arctic climate is an increase in both air and ocean temperatures leading to reduced sea ice distribution. Population viability is for long‐lived species dependent on adult survival and recruitment. Predation is the main mortality cause in many bird populations, and egg predation is considered the main cause of reproductive failure in many birds. To assess the effect of predation and climate, we compared population time series from a natural experiment where a trapper/down collector has been licensed to actively protect breeding common eiders Somateria mollissima (a large seaduck) by shooting/chasing egg predators, with time series from another eider colony located within a nature reserve with no manipulation of egg predators. We found that actively limiting predator activity led to an increase in the population growth rate and carrying capacity with a factor of 3–4 compared to that found in the control population. We also found that population numbers were higher in years with reduced concentration of spring sea ice. We conclude that there was a large positive impact of human limitation of egg predators, and that this lead to higher population growth rate and a large increase in size of the breeding colony. We also report a positive effect of warming climate in the high arctic as reduced sea‐ice concentrations was associated with higher numbers of breeding birds.     

Improved nutrition cues switch from efficiency to luxury phenotypes for a long‐lived ungulate

Cervid phenotype can be categorized as efficiency, which promotes survival but not extravagant growth, or luxury which promotes growth of large weaponry and body size. Although nutritional variation greatly influences these phenotypic forms, the potential for subspecies‐linked genetic or founder effects from restocking efforts of harvested species has not been eliminated. We measured intergenerational phenotypic change of males in response to improved nutrition in three captive‐reared populations of white‐tailed deer. Study animals were offspring of females captured from three regions displaying variation in antler and body size as well as nutritional variation. We fed all animals a high‐quality diet and measured antler and body size for two generations. We predicted that improved long‐term nutrition would cue a switch from efficiency to luxury phenotype for all populations and that regional compensation of antler and body size would occur. Improved nutrition positively influenced all measures of antler and body size; however, changes varied in magnitude. Antler size was more responsive than body size. Improved nutrition also facilitated regional compensation of antler size and partial compensation of body size. Our results show that improved long‐term nutrition cues a shift from efficiency to luxury phenotype in a long‐lived cervid with weaponry being more responsive than body size. Compensation of antler size suggests that weaponry is greatly influenced by nutrition and is not restricted by subspecies‐linked genetic or founder effects from restocking efforts related to our regional populations. Therefore, strategies to improve cervid antler and body size should include habitat management that elevates long‐term diet quality.     

Small‐scale resource tracking in a population of a long‐lived insect

How plant‐feeding insects distribute themselves and utilize their host plant resources is still poorly understood. Several processes may be involved, and their relative roles may vary with the spatial scale considered. Herein, we investigate small‐scale patterns, namely how population density of a gall midge is affected by individual growth form, phenology, and microsite characteristics of its herb host. The long‐lived plant individuals vary much with regard to number of shoots, flower abundance, and flowering phenology. This variation is connected to site characteristics, primarily the degree of sun exposure. The monophagous insect galls the flowers of the host plant – an easily defined food resource. It is a poor disperser, but very long‐lived; diapausing larvae can stay in the soil for many years. Galls were censused on individual plants during 5 years; from a peak to a low in gall population density. Only a very small fraction of the flowers produced (<0.5%) were galled even in the peak year. Nevertheless, most plant individuals had galls at least 1 year. In a stepwise multiple regression, plant size (number of shoots) was found to be the most important predictor of gall density (galls/flower). However, gall density decreased more than one order of magnitude over the plant size range observed. There was also a weak effect of plant phenology. Early flowering plants had lower gall densities than those starting later. Sun exposure had no direct effect on gall density, but a path analysis revealed indirect effects via the timing of flowering. Gall population change was highly synchronous in different parts of the study area with no significant decrease in synchrony with distance.     

Contrasting heterozygosity‐fitness correlations across life in a long‐lived seabird

Selection is a central force underlying evolutionary change and can vary in strength and direction, for example across time and space. The fitness consequences of individual genetic diversity have often been investigated by testing for multilocus heterozygosity‐fitness correlations (HFCs), but few studies have been able to assess HFCs across life stages and in both sexes. Here, we test for HFCs using a 26‐year longitudinal individual‐based data set from a large population of a long‐lived seabird (the common tern, Sterna hirundo), where 7,974 chicks and breeders of known age were genotyped at 15 microsatellite loci and sampled for life‐history traits over the complete life cycle. Heterozygosity was not correlated with fledging or post‐fledging prospecting probabilities, but was positively correlated with recruitment probability. For breeders, annual survival was not correlated with heterozygosity, but annual fledgling production was negatively correlated with heterozygosity in males and highest in intermediately heterozygous females. The contrasting HFCs among life stages and sexes indicate differential selective processes and emphasize the importance of assessing fitness consequences of traits over complete life histories.     

Differential response to larval crowding of a long‐ and a short‐lived medfly biotype

Response of endophytic fruit fly species (Tephritidae) to larval crowding is a form of scramble competition that may affect important life history traits of adults, such as survival and reproduction. Recent empirical evidence demonstrates large differences in adult life history traits, especially longevity, among Mediterranean fruit fly (Ceratitis capitata; "medfly") biotypes obtained from different regions of the world. However, whether the evolution of long lifespan is associated with response to stress induced by larval crowding has not been fully elucidated. We investigated, under constant laboratory conditions, the response of a short‐ and a long‐lived medfly biotypes to stress induced by larval crowding. Survival and development of larvae and pupae and the size of resulting pupae were recorded. The lifespan and age‐specific egg production patterns of the obtained adults were recorded. Our findings reveal that increased larval density reduced immature survival (larvae and pupae) in the short‐lived biotype but had rather neutral effects on the longed‐lived one. Only larvae of the long‐lived biotype were capable of prolonging their developmental duration under the highest crowding regime to successfully pupate and emerge as adults. Response of emerging adults to larvae crowding conditions was similar in the two medfly biotypes. Those individuals emerging from high larval density regimes had reduced longevity and fecundity. Long‐lived biotype individuals, however, appeared to suffer a higher cost in longevity compared with the short‐lived one. The importance of our findings to understand the evolution of long lifespan is discussed.     

Mating dynamics and multiple paternity in a long‐lived vertebrate

Multiple paternity is relatively common across diverse taxa; however, the drivers and implications related to paternal and maternal fitness are not well understood. Several hypotheses have been offered to explain the occurrence and frequency of multiple paternity. One set of hypotheses seeks to explain multiple paternity through direct and indirect benefits including increased genetic diversity or enhanced offspring fitness, whereas another set of hypotheses explains multiple paternity as a by‐product of sexual conflict and population‐specific parameters such as density. Here, we investigate mating system dynamics in a historically studied population of the American alligator (Alligator mississippiensis) in coastal South Carolina. We examine parentage in 151 nests across 6 years and find that 43% of nests were sired by multiple males and that male reproductive success is strongly influenced by male size. Whereas clutch size and hatchling size did not differ between singly sired and multiply sired nests, fertility rates were observed to be lower in multiply sired clutches. Our findings suggest that multiple paternity may exert cost in regard to female fitness, and raise the possibility that sexual conflict might influence the frequency of multiple paternity in wild alligator populations.     

Unexpected genetic differentiation between recently recolonized populations of a long‐lived and highly vagile marine mammal

Many species have been heavily exploited by man leading to local extirpations, yet few studies have attempted to unravel subsequent recolonization histories. This has led to a significant gap in our knowledge of the long‐term effects of exploitation on the amount and structure of contemporary genetic variation, with important implications for conservation. The Antarctic fur seal provides an interesting case in point, having been virtually exterminated in the nineteenth century but subsequently staged a dramatic recovery to recolonize much of its original range. Consequently, we evaluated the hypothesis that South Georgia (SG), where a few million seals currently breed, was the main source of immigrants to other locations including Livingston Island (LI), by genotyping 366 individuals from these two populations at 17 microsatellite loci and sequencing a 263 bp fragment of the mitochondrial hypervariable region 1. Contrary to expectations, we found highly significant genetic differences at both types of marker, with 51% of LI individuals carrying haplotypes that were not observed in 246 animals from SG. Moreover, the youngest of three sequentially founded colonies at LI showed greater similarity to SG at mitochondrial DNA than microsatellites, implying temporal and sex‐specific variation in recolonization. Our findings emphasize the importance of relict populations and provide insights into the mechanisms by which severely depleted populations can recover while maintaining surprisingly high levels of genetic diversity.     

Demographic responses to weather fluctuations are context dependent in a long‐lived amphibian

Weather fluctuations have been demonstrated to affect demographic traits in many species. In long‐lived organisms, their impact on adult survival might be buffered by the evolution of traits that reduce variation in interannual adult survival. For example, skipping breeding is an effective behavioral mechanism that may limit yearly variation in adult survival when harsh weather conditions occur; however, this in turn would likely lead to strong variation in recruitment. Yet, only a few studies to date have examined the impact of weather variation on survival, recruitment and breeding probability simultaneously in different populations of the same species. To fill this gap, we studied the impact of spring temperatures and spring rainfall on survival, on reproductive skipping behavior and on recruitment in five populations of a long‐lived amphibian, the yellow‐bellied toad (Bombina variegata). Based on capture–recapture data, our findings demonstrate that survival depends on interactions between age, population and weather variation. Varying weather conditions in the spring result in strong variation in the survival of immature toads, whereas they have little effect on adult toads. Breeding probability depends on both the individual's previous reproductive status and on the weather conditions during the current breeding season, leading to high interannual variation in recruitment. Crucially, we found that the impact of weather variation on demographic traits is largely context dependent and may thus differ sharply between populations. Our results suggest that studies predicting the impact of climate change on population dynamics should be taken with caution when the relationship between climate and demographic traits is established using only one population or few populations. We therefore highly recommend further research that includes surveys replicated in a substantial number of populations to account for context‐dependent variation in demographic processes.     

Favoring recruitment as a conservation strategy to improve the resilience of long‐lived reptile populations: Insights from a population viability analysis

In long‐lived species, although adult survival typically has the highest elasticity, temporal variations in less canalized demographic parameters are the main drivers of population dynamics. Targeting recruitment rates may thus be the most effective strategy to manage these species. We analyzed 1,136 capture–recapture histories collected over 9 years in an isolated population of the critically endangered Lesser Antillean iguana, using a robust design Pradel model to estimate adult survival and recruitment rates. From an adult population size estimated at 928 in 2013, we found a yearly decline of 4% over the 8‐year period. As expected under the canalization hypothesis for a long‐lived species, adult survival was high and constant, with little possibility for improvement, whereas the recruitment rate varied over time and likely drove the observed population decline. We then used a prospective perturbation analysis to explore whether managing the species’ immature cohorts would at least slow the population decline. The prospective perturbation analysis suggested that a significant and sustained conservation effort would be needed to achieve a recruitment rate high enough to slow the population decline. We posit that the high recruitment rate achieved in 2014—likely due to the maintenance in 2012 of the main nesting sites used by this population—would be sufficient to slow this population''s decline if it was sustained each year. Based on the results of diverse pilot studies we conducted, we identified the most likely threats targeting the eggs and immature cohorts, stressing the need to improve reproductive success and survival of immature iguanas. The threats we identified are also involved in the decline of several reptile species, and species from other taxa such as ground‐nesting birds. These findings on a little‐studied taxon provide further evidence that focusing on the immature life stages of long‐lived species can be key to their conservation.     

Cryptic inbreeding depression in a growing population of a long‐lived species

Genetic effects are often overlooked in endangered species monitoring, and populations showing positive growth are often assumed to be secure. However, the continued reproductive success of a few individuals may mask issues such as inbreeding depression, especially in long‐lived species. Here, we test for inbreeding depression in little spotted kiwi (Apteryx owenii) by comparing a population founded with two birds to one founded with 40 birds, both from the same source population and both showing positive population growth. We used a combination of microsatellite genotypes, nest observations and modelling to examine the consequences of assessing population viability exclusively via population growth. We demonstrate (i) significantly lower hatching success despite significantly higher reproductive effort in the population with two founders; (ii) positive growth in the population with two founders is mainly driven by ongoing chick production of the founding pair; and (iii) a substantial genetic load in the population founded with two birds (10–15 diploid lethal equivalents). Our results illustrate that substantial, cryptic inbreeding depression may still be present when a population is growing, especially in long‐lived species with overlapping generations.     

Copy number variation associates with mortality in long‐lived individuals: a genome‐wide assessment

Copy number variants (CNVs) represent a significant source of genetic variation in the human genome and have been implicated in numerous diseases and complex traits. To date, only a few studies have investigated the role of CNVs in human lifespan. To investigate the impact of CNVs on prospective mortality at the extreme end of life, where the genetic component of lifespan appears most profound, we analyzed genomewide CNV data in 603 Danish nonagenarians and centenarians (mean age 96.9 years, range 90.0–102.5 years). Replication was performed in 500 long‐lived individuals from the Leiden Longevity Study (mean age 93.2 years, range 88.9–103.4 years). First, we assessed the association between the CNV burden of each individual (the number of CNVs, the average CNV length, and the total CNV length) and mortality and found a significant increase in mortality per 10 kb increase in the average CNV length, both for all CNVs (hazard ratio (HR) = 1.024, P = 0.002) and for duplications (HR = 1.011, P = 0.005), as well as per 100 kb increase in the total length of deletions (HR = 1.009, P = 0.0005). Next, we assessed the relation between specific deletions and duplications and mortality. Although no genome–wide significant associations were discovered, we identified six deletions and one duplication that showed consistent association with mortality in both or either of the sexes across both study populations. These results indicate that the genome–wide CNV burden, specifically the average CNV length and the total CNV length, associates with higher mortality in long‐lived individuals.     

Tree demography dominates long‐term growth trends inferred from tree rings

Understanding responses of forests to increasing CO₂ and temperature is an important challenge, but no easy task. Tree rings are increasingly used to study such responses. In a recent study, van der Sleen et al. (2014) Nature Geoscience, 8, 4 used tree rings from 12 tropical tree species and find that despite increases in intrinsic water use efficiency, no growth stimulation is observed. This challenges the idea that increasing CO₂ would stimulate growth. Unfortunately, tree ring analysis can be plagued by biases, resulting in spurious growth trends. While their study evaluated several biases, it does not account for all. In particular, one bias may have seriously affected their results. Several of the species have recruitment patterns, which are not uniform, but clustered around one specific year. This results in spurious negative growth trends if growth rates are calculated in fixed size classes, as ‘fast‐growing’ trees reach the sampling diameter earlier compared to slow growers and thus fast growth rates tend to have earlier calendar dates. We assessed the effect of this ‘nonuniform age bias’ on observed growth trends and find that van der Sleen's conclusions of a lack of growth stimulation do not hold. Growth trends are – at least partially – driven by underlying recruitment or age distributions. Species with more clustered age distributions show more negative growth trends, and simulations to estimate the effect of species’ age distributions show growth trends close to those observed. Re‐evaluation of the growth data and correction for the bias result in significant positive growth trends of 1–2% per decade for the full period, and 3–7% since 1950. These observations, however, should be taken cautiously as multiple biases affect these trend estimates. In all, our results highlight that tree ring studies of long‐term growth trends can be strongly influenced by biases if demographic processes are not carefully accounted for.     

Population‐level influence of a recurring disease on a long‐lived wildlife host

Despite a heightened interest regarding the role of infectious diseases in wildlife conservation, few studies have explicitly addressed the impacts of chronic, persistent diseases on long‐term host population dynamics. Using mycoplasmal upper respiratory tract disease (URTD) within natural gopher tortoise Gopherus polyphemus populations as a model system, we investigated the influence of chronic recurring disease epizootics on host population dynamics and persistence using matrix population models and Markov chain models for temporally autocorrelated environments. By treating epizootics as a form of environmental stochasticity, we evaluated host population dynamics across varying levels of outbreak duration (ρ), outbreak recurrence (f), and disease‐induced mortality (μ). Baseline results indicated a declining growth rate (λ) for populations under unexposed or enzootic conditions (λ_Enzootic= 0.903, 95% CI: 0.765–1.04), and a median time to quasi‐extinction of 29 years (range: 28–30 years). Under recurring epizootics, stochastic growth rates overlapped with baseline growth rates, and ranged between 0.838–0.902. Median quasi‐extinction times under recurring epizootics also overlapped for most scenarios with those of baseline conditions, and ranged between 18–29 years, with both metrics decreasing as a function of f and μ. Overall, baseline (enzootic) conditions had a greater impact on λ than epizootic conditions, and demographic vital rates were proportionately more influential on λ than disease‐ or outbreak‐associated parameters. Lower‐level elasticities revealed that, among disease‐ and outbreak‐associated parameters, increases in μ, force of infection (φ), and f negatively influenced λ. The impact of disease on host population dynamics depended primarily on how often a population underwent an epizootic state, rather than how long the epizootic persisted within the exposed population. The modeling framework presented in this paper could be widely applied to a range of wildlife disease systems in which hosts suffer from persistent recurring diseases.     

Genetic monogamy in two long‐lived New Zealand passerines

High rates of extra‐pair paternity (EPP) can be relatively common in passerines whereas low rates or absence of EPP are often associated with taxa that are long‐lived and exhibit obligatory paternal care. We examined EPP in an under‐represented category: passerine species with relatively long life spans (or low annual mortality rates). Specifically, we studied EPP in New Zealand saddlebacks Philesturnus carunculatus and robins Petroica australis, two species with unusually low annual mortality rates (6.5–11% and 10–20% respectively). No EPP (0%) was detected in saddlebacks (39 pairs, 202 offspring) and only one case of EPP (1.9%) was detected in robins (54 pairs, 198 offspring). Genetic monogamy in these passerine species supports the hypothesis that low annual mortality rates play an important role in explaining variation in rates of EPP across species.     

Molecular signatures of long‐lived proteins: autolytic cleavage adjacent to serine residues

The centre of the human lens, which is composed of proteins that were synthesized prior to birth, is an ideal model for the evaluation of long‐term protein stability and processes responsible for the degradation of macromolecules. By analysing the sequences of peptides present in human lens nuclei, characteristic features of intrinsic protein instability were determined. Prominent was the cleavage on the N‐terminal side of serine residues. Despite accounting for just 9% of the amino acid composition of crystallins, peptides with N‐terminal Ser represented one‐quarter of all peptides. Nonenzymatic cleavage at Ser could be reproduced by incubating peptides at elevated temperatures. Serine residues may thus represent susceptible sites for autolysis in polypeptides exposed to physiological conditions over a period of years. Once these sites are cleaved, other chemical processes result in progressive removal or ‘laddering’ of amino acid residues from newly exposed N‐ and C‐termini. As N‐terminal Ser peptides originated from several crystallins with unrelated sequences, this may represent a general feature of long‐lived proteins.