The influence of predator community composition on photoprotective traits of copepods

Trait expression of natural populations often jointly depends on prevailing abiotic environmental conditions and predation risk. Copepods, for example, can vary their expression of compounds that confer protection against ultraviolet radiation (UVR), such as astaxanthin and mycosporine‐like amino acids (MAAs), in relation to predation risk. Despite ample evidence that copepods accumulate less astaxanthin in the presence of predators, little is known about how the community composition of planktivorous fish can affect the overall expression of photoprotective compounds. Here, we investigate how the (co‐)occurrence of Arctic charr (Salvelinus alpinus) and threespine stickleback (Gasterosteus aculeatus) affects the photoprotective phenotype of the copepod Leptodiaptomus minutus in lake ecosystems in southern Greenland. We found that average astaxanthin and MAA contents were lowest in lakes with stickleback, but we found no evidence that these photoprotective compounds were affected by the presence of charr. Furthermore, variance in astaxanthin among individual copepods was greatest in the presence of stickleback and the astaxanthin content of copepods was negatively correlated with increasing stickleback density. Overall, we show that the presence and density of stickleback jointly affect the content of photoprotective compounds by copepods, illustrating how the community composition of predators in an ecosystem can determine the expression of prey traits that are also influenced by abiotic stressors.     

The influence of macrophytes on a phytoplankton community in experimental conditions

The impact of submerged macrophytes or their extracts on planktonic algae was studied under experimental conditions. Live Ceratophyllum demersum L., its extract, and extracts of four other plant species induced modifications in the phytoplankton dominance structure. These modifications were: a decline in the number of Oscillatoria limnetica Lemm., which was the most numerous cyanobacterian species, and a decline in biomass and percentage contribution of all cyanobacteria to total algal biomass. This was accompanied by an increase in biomass and percentage contribution of green algae, especially Chlorella sp. and Chlamydomonas sp. Also, there was an increase in biomass and percentage contribution of nanoplankton (under 50 µm) to total phytoplankton biomass.The isolation of planktonic algae from direct influence of C. demersum by means of dialysis membranes caused an increase in number, biomass and percentage contribution of cyanobacteria. Release of organic compounds of over 3000 daltons by macrophytes apparently contributed to a decline of cyanobacteria by changing the phytoplankton dominance structure.     

The influence of soluble microbial products on microbial community composition: hypothesis of microbial community succession

Soluble microbial products (SMP) are organic compounds produced by activated sludge microorganisms as they degrade substrates. They include by-products of microbial activity, death and lysis. The available literature does not reveal how SMP influence microbial community composition. In this regard, we microscopically studied changes in composition of microbial communities, especially protozoa and metazoa, under the influence of increased as well as reduced levels of SMP. The presence of SMP at high level significantly caused changes in microbial community composition. Microbial species shifted from attached ciliates (12-175 microm) to free-swimming and crawling ciliates (35-330 microm) and then invertebrates, which included rotifers (0.2-1 mm) and nematodes (1-50 mm). The shift of small-size microorganisms to large ones was observed as one of the most significant influences of SMP. Attached ciliates reappeared when we removed the SMP that had accumulated in the bioreactors - we have called this as the resurrection phenomenon of microorganisms. Such rapid changes in microbial community composition were not observed in the experiment with low concentration of SMP. Overall, the results suggest that accumulation of SMP is one of the intrinsic regulatory mechanisms that control viability and dormancy of microbial communities in activated sludge.     

The influence of food supplementation on a coastal dune rodent community

Studies of the rodent community in regenerating coastal dune forest areas north of Richards Bay, South Africa, have indicated that a number of species occupy newly rehabilitating areas. Unstable environmental conditions result in habitat changes, rather than competitive interactions, being the major determinant of rodent community development. This led to the present study, which investigated the effects of supplementary food on rodent assemblages. We attempted to stabilize food availability in order to elucidate some of the mechanisms responsible for the development of the rodent community. By only increasing an existing portion of the resource spectrum, we reduced species diversity, probably through dominance by competitive superior exploiters of the augmented resource. Thus, species diversity decreased with food supplementation, as a result of an increase in the abundance of Mastomys natalensis rather than because of a change in the number of species or the abundance of other species.     

城市公园生境类型对鸟类群落的影响

2011年12月—2012年11月,在上海世纪公园和滨江森林公园对鸟类群落和植物群落进行调查,通过对12个植被变量进行主成分分析,将两个公园分为8种不同的生境类型。结果表明:2个公园生境构成存在显著差异,滨江森林公园灌木层植物发达的生境(Habitat with developed shrub layer,S型)以及灌木层和地被层植物都发达的生境(Habitat with developed tree layer and shrub layer,T+S型)数量显著多于世纪公园,世纪公园地被层发达的生境(Habitat with developed ground cover layer,G型)以及乔木层和地被层植物都发达的生境(Habitat with developed tree layer and ground cover layer,T+G型)数量显著多于滨江森林公园。世纪公园不同生境中鸟种数差异显著,而滨江森林公园中差异不显著。2个公园有24种共有鸟种,对共有鸟种生境利用率的配对t检验结果表明,滨江森林公园鸟类生境利用率显著高于世纪公园。对2个公园共有生境类型中鸟种数进行分析,发现滨江森林公园鹟科(Muscicapidae)鸟类种数显著大于世纪公园。根据以上结果,上海城市公园不同生境类型对鸟类群落结构存在显著影响。因此,建议在规划和建设大型城市公园时,应构建植被分层结构复杂的生境,多样化种植各类乔木,林下多样化搭配灌木。在保留供游客休憩草坪区域的同时种植各类草本植物,以此提高鸟类生境利用率,增加城市公园的鸟类多样性。     

The influence of alfalfa-switchgrass intercropping on microbial community structure and function

The use of nitrogen fertilizer on bioenergy crops such as switchgrass results in increased costs, nitrogen leaching and emissions of N₂O, a potent greenhouse gas. Intercropping with nitrogen-fixing alfalfa has been proposed as an environmentally sustainable alternative, but the effects of synthetic fertilizer versus intercropping on soil microbial community functionality remain uncharacterized. We analysed 24 metagenomes from the upper soil layer of agricultural fields from Prosser, WA over two growing seasons and representing three agricultural practices: unfertilized switchgrass (control), fertilized switchgrass and switchgrass intercropped with alfalfa. The synthetic fertilization and intercropping did not result in major shifts of microbial community taxonomic and functional composition compared with the control plots, but a few significant changes were noted. Most notably, mycorrhizal fungi, ammonia-oxidizing archaea and bacteria increased in abundance with intercropping and fertilization. However, only betaproteobacterial ammonia-oxidizing bacteria abundance in fertilized plots significantly correlated to N₂O emission and companion qPCR data. Collectively, a short period of intercropping elicits minor but significant changes in the soil microbial community toward nitrogen preservation and that intercropping may be a viable alternative to synthetic fertilization.     

The influence of habitat heterogeneity on freshwater bacterial community composition and dynamics

Multiple forces structure natural microbial communities, but the relative roles and interactions of these drivers are poorly understood. Gradients of physical and chemical parameters can be especially influential. In traditional ecological theory, variability in environmental conditions across space and time represents habitat heterogeneity, which may shape communities. Here we used aquatic microbial communities as a model to investigate the relationship between habitat heterogeneity and community composition and dynamics. We defined spatial habitat heterogeneity as vertical temperature and dissolved oxygen (DO) gradients in the water column, and temporal habitat heterogeneity as variation throughout the open-water season in these environmental parameters. Seasonal lake mixing events contribute to temporal habitat heterogeneity by destroying and re-creating these gradients. Because of this, we selected three lakes along a range of annual mixing frequency (polymictic, dimictic, meromictic) for our study. We found that bacterial community composition (BCC) was distinct between the epilimnion and hypolimnion within stratified lakes, and also more variable within the epilimnia through time. We found stark differences in patterns of epilimnion and hypolimnion dynamics over time and across lakes, suggesting that specific drivers have distinct relative importance for each community.     

不同干扰类型对高寒草甸群落结构和植物多样性的影响

对高寒草甸天然草地进行了施肥、围栏和放牧 中牧和重牧 处理,研究不同干扰类型对草地植物多样性的影响.结果表明,施肥使草地植物群落物种组成贫乏,群落结构趋于简单,物种多样性减少;中等程度放牧增加了群落结构的复杂性,丰富度指数和多样性指数均最高,支持 中度干扰理论 ;重度放牧,由于干扰过于剧烈而减少了物种优势度和多样性;而轻度干扰的围栏草地,群落由少数优势种所统治,多样性也不高.物种数 S 、丰富度指数 Ma 、Shannon-Wiener指数 H' 、Simpson指数 D 的排列顺序均为:施肥草地<围栏草地<重牧草地<中牧草地;均匀度指数 Jsw 的变化趋势与上述各指数相同;优势度指数的变化趋势则相反,为施肥草地>围栏草地>重牧草地>中牧草地.4种干扰类型草地群落的生活型功能群基本一致,均由多年生禾草、多年生杂类草和莎草类组成,但各功能群在群落中所占比重及各功能群内所含物种数则大不相同.说明不同干扰类型对草地植物群落的物种组成、多样性格局及系统功能等方面产生不同的影响.     

不同更新方式对林地植物群落特种多样性的影响

本文就人工林经营中的三种更新方式对植物群落中物种多样性的影响进行研究。结果表明,1200m^2样地物种丰富度为：天然更新159种,人促更新130种,人工造林94种;多样性指数（Dsh）分别为4.3004、3.9283、3.5048;多样性均匀度指数(Jsh)分别为0.8484、0.8070、0.7714。人工造林的营林干扰是物种丧失和林分物种多样性下降的主要原因。     

The establishment of China's core biodiversity metadata standard

Biodiversity metadata provide service to query, management and use of actual data sets. The progress of the development of metadata standards in China was analyzed, and metadata required and/or produced based on the Convention on Biological Diversity were reviewed. A biodiversity metadata standard was developed based on the characteristics of biodiversity data and in line with the framework of international metadata standards. The content of biodiversity metadata is divided into two levels. The first level consists of metadata entities and elements that are necessary to exclusively identify a biodiversity data set, and is named as Core Metadata. The second level comprises metadata entities and elements that are necessary to describe all aspects of a biodiversity data set. The standard for core biodiversity metadata is presented in this paper, which is composed of 51 elements belonging to 6 categories (entities), i.e. inventory information, collection information, information on the content of the data set, management information, access information, and metadata management information. The name, definition, condition, data type, and field length of metadata elements in these six categories (entities) are also described.     

The influence of stream sediment particle size on bacterial abundance and community composition

Sediment features may play a major role in determining benthic bacterial community structure. In this study, sediment samples were collected on four dates over the course of a year from a Northeast Ohio stream and fractionated into different particle size classes. Abundance of bacteria of various taxa on differentially sized sediment fractions was determined using fluorescent in situ hybridization which relies on taxon-specific oligonucleotide probes that hybridize to rRNA in intact cells. The differences among the size classes were generally small in comparison to the large seasonal changes observed. These seasonal changes differed greatly among taxa; for some, peaks in the number of cells hybridizing a particular probe were in the spring (Domain Bacteria, α-Proteobacteria), while others peaked in the summer/fall (γ-Proteobacteria and the Cytophaga-Flavobacterium). At the species level, the abundances of Burkholderia cepacia and Acinetobacter calcoaceticus were highest in the summer on sediments of all sizes. Seasonal differences appeared to be more of a factor driving community differences than sediment particle size.     

The influence of diet and environment on the gut microbial community of field crickets

The extent to which diet and environment influence gut community membership (presence or absence of taxa) and structure (individual taxon abundance) is the subject of growing interest in microbiome research. Here, we examined the gut bacterial communities of three cricket groups: (1) wild caught field crickets, (2) laboratory‐reared crickets fed cat chow, and (3) laboratory‐reared crickets fed chemically defined diets. We found that both environment and diet greatly altered the structure of the gut bacterial community. Wild crickets had greater gut microbial diversity and higher Firmicutes to Bacteroidetes ratios, in contrast to laboratory‐reared crickets. Predictive metagenomes revealed that laboratory‐reared crickets were significantly enriched in amino acid degradation pathways, while wild crickets had a higher relative abundance of peptidases that would aid in amino acid release. Although wild and laboratory animals differ greatly in their bacterial communities, we show that the community proportional membership remains stable from Phylum to Family taxonomic levels regardless of differences in environment and diet, suggesting that endogenous factors, such as host genetics, have greater control in shaping gut community membership.     

The influence of goethite and gibbsite on soluble nutrient dynamics and microbial community composition

Iron and aluminum (oxyhydr)oxides are ubiquitous in the soil environment and have the potential to strongly affect the properties of dissolved organic matter. We examined the effect of oxide surfaces on soluble nutrient dynamics and microbial community composition using an incubation of forest floor material in the presence of (1) goethite and quartz, (2) gibbsite and quartz, and (3) quartz surfaces. Forest floor material was incubated over a period of 154 days. Aqueous extracts of the incubations were harvested on days 5, 10, 20, 30, 60, 90, and 154, and concentrations of P, N, PO₄ ^3?, NO₂ ^?, NO₃ ^?, and organic C were measured in the solutions. Microbial community composition was examined through pyrosequencing of bacterial and fungal small subunit ribosomal RNA genes on selected dates throughout the incubation. Results indicated that oxide surfaces exerted strong control on soluble nutrient dynamics and on the composition of the decomposer microbial community, while possibly having a small impact on system-level respiration. Goethite and gibbsite surfaces showed preferential adsorption of P-containing and high molar mass organic solutes, but not of N-containing compounds. On average, organic C concentrations were significantly lower in water extractable organic matter (WEOM) solutions from oxide treatments than from the control treatment (P = 0.0037). Microbial community composition varied both among treatments and with increasing time of incubation. Variation in bacterial and fungal community composition exhibited strong-to-moderate correlation with length of incubation, and several WEOM physiochemical characteristics including apparent (weight averaged) molar mass, pH and electrical conductivity. Additionally, variation in bacterial community composition among treatments was correlated with total P (r = 0.60, P < 0.0001), PO₄ ^3? (r = 0.79, P < 0.0001), and organic C (r = 0.36, P = 0.015) concentrations; while variation in fungal communities was correlated with organic C concentrations (r = ?0.48, P = 0.0008) but not with phosphorus concentrations. The relatively small impact of oxide surfaces on system-level microbial respiration of organic matter despite their significant effects on microbial community composition and WEOM dynamics lends additional support to the theory of microbial functional redundancy.     

The influence of riparian vegetation on macroinvertebrate community structure in four Hong Kong streams

The benthic macroinvertebrate communities of four Hong Kong streams with similar water chemistry but differing riparian conditions were investigated. Differences in chlorophylls and detritus standing stocks reflected the degree of shading by riparian vegetation; Tai Po Kau Forest Stream (TPKFS) and Bride's Pool (BP) had an allochthonous food base while autochthonous energy sources were relatively more important in Lam Tsuen River (LTR) and Pui O Stream (POS). The macrobenthos was dominated by aquatic insects and morphospecies richness (excluding Chironomidac) ranged from 70 (POS) to 94 (TPKFS). Differences in total macroinvertebrate abundance across sites were not related to chlorophylls or detritus.
Highly significant differences in the morphospecies comprising the most numerous taxa at each site were observed, and TPKS and BP were more similar to each other than to the LTR-POS pair with respect to top-ranked taxa. Intraspecific comparisons of the abundance of these taxa revealed significant differences for 23 out of 30 morphospecies. Multiple regression of the abundance of key morphospecies against independent variables (chlorophylls a , b and c , total chlorophyll and detritus) yielded significant best-fit models for all taxa showing intersite differences in abundance. These data can be interpreted as reflecting the influence of riparian vegetation on stream community structure via an effect on food supply. The results were discussed with reference to the applicability of the River Continuum Concept in the tropics.     

The influence of honeydew on arthropod community composition in a New Zealand beech forest

The effect of honeydew density on arthropod community structure was investigated in the Nothofagus forest of Nelson Lakes National Park, New Zealand. Pitfall trapping revealed no community response to honeydew density, whereas sticky trapping showed the community composition of trunk-dwelling arthropods varied along a honeydew gradient. Mycetophilidae, Staphylinidae, Pteromalidae and Margarodidae were classified as high honeydew biased, while Diapriidae and Platygasteridae were non-honeydew biased. Arthropod distributions within a forest are not uniform, as a result of honeydew patchiness.     

The effect of woodland area on avian community composition in a fragmented southern UK landscape and associated management recommendations

ABSTRACT

Capsule: Smaller woodlands not only support fewer species but also show different avian community composition due to loss of woodland interior and an increase in edge habitat.

Aims: To use observed community composition changes, rather than traditional total species richness-area relationships, to make area-specific management recommendations for optimizing woodland habitat for avian communities in fragmented landscapes.

Methods: 17 woodlands were selected in Oxfordshire, UK, with areas between 0.2 and 120 ha. Three dawn area searches were conducted in each woodland between 1st April and 28th May 2016 to record encounter rates for each species. The impact of internal habitat variation on woodland comparability was assessed using habitat surveys.

Results: Woodlands with area less than 3.6 ha showed a significant positive relationship between total avian species richness and woodland area. Woodlands with area over 3.6 ha were all consistent with a mean (± se) total richness of 25.4?±?0.6 species, however the number of woodland specialists continued to increase with woodland area. Woodland generalists dominated the total encounter rate across the area range, however the fractional contribution of woodland specialists showed a significant positive correlation with woodland area, while the fractional contribution of non-woodland species significantly decreased. Non-woodland species numbers peaked in mid-sized woodlands with enhanced habitat heterogeneity.

Conclusions: Community composition analysis enabled more targeted recommendations than total species richness analysis, specifically: large woodlands (over 25?ha) in southern UK should focus conservation efforts on providing the specific internal habitats required by woodland specialists; medium-sized woodlands (between approximately 4 and 25?ha) should focus on promoting internal habitat variety, which can benefit both woodland species and non-woodland species of conservation concern in the surrounding landscape; small woodlands (under 4?ha) should focus on providing nesting opportunities for non-woodland species and on improving connectivity to maximize habitat for woodland generalists and facilitate movement of woodland specialists.     

Species pools,community completeness and invasion: disentangling diversity effects on the establishment of native and alien species

Invasion should decline with species richness, yet the relationship is inconsistent. Species richness, however, is a product of species pool size and biotic filtering. Invasion may increase with richness if large species pools represent weaker environmental filters. Measuring species pool size and the proportion realised locally (completeness) may clarify diversity‐invasion relationships by separating environmental and biotic effects, especially if species’ life‐history stage and origin are accounted for. To test these relationships, we added seeds and transplants of 15 native and alien species into 29 grasslands. Species pool size and completeness explained more variation in invasion than richness alone. Although results varied between native and alien species, seed establishment and biotic resistance to transplants increased with species pool size, whereas transplant growth and biotic resistance to seeds increased with completeness. Consequently, species pools and completeness represent multiple independent processes affecting invasion; accounting for these processes improves our understanding of invasion.     

Collective emotions online and their influence on community life

Background

E-communities, social groups interacting online, have recently become an object of interdisciplinary research. As with face-to-face meetings, Internet exchanges may not only include factual information but also emotional information – how participants feel about the subject discussed or other group members. Emotions in turn are known to be important in affecting interaction partners in offline communication in many ways. Could emotions in Internet exchanges affect others and systematically influence quantitative and qualitative aspects of the trajectory of e-communities? The development of automatic sentiment analysis has made large scale emotion detection and analysis possible using text messages collected from the web. However, it is not clear if emotions in e-communities primarily derive from individual group members'' personalities or if they result from intra-group interactions, and whether they influence group activities.

Methodology/Principal Findings

Here, for the first time, we show the collective character of affective phenomena on a large scale as observed in four million posts downloaded from Blogs, Digg and BBC forums. To test whether the emotions of a community member may influence the emotions of others, posts were grouped into clusters of messages with similar emotional valences. The frequency of long clusters was much higher than it would be if emotions occurred at random. Distributions for cluster lengths can be explained by preferential processes because conditional probabilities for consecutive messages grow as a power law with cluster length. For BBC forum threads, average discussion lengths were higher for larger values of absolute average emotional valence in the first ten comments and the average amount of emotion in messages fell during discussions.

Conclusions/Significance

Overall, our results prove that collective emotional states can be created and modulated via Internet communication and that emotional expressiveness is the fuel that sustains some e-communities.     

The influence of biomanipulation on fish community development in a southeastern United States cooling reservoir

L Lake, a reactor cooling reservoir in South Carolina, USA was managed after filling to promote the development of healthy ecological communities similar to those in mature regional cooling reservoirs. Two types of biomanipulation were undertaken to achieve this goal, the introduction of typical southeastern US reservoir fishes (bluegill and largemouth bass) and artificial planting of native aquatic macrophytes. Fish assemblages were monitored by electrofishing from reservoir filling in 1986 until 1998. Multivariate analysis divided the fish samples into five sequential periods resulting from species replacements and additions. Small species that colonized L Lake from a feeder stream predominated in the first period but were mostly eliminated, as bluegill, largemouth bass, and other lentic species increased in the second period. A rapid increase in threadfin shad abundance characterized the third period, and small littoral zone and phytophilous fishes increased during the fourth and fifth periods coincident with the proliferation of aquatic macrophytes. Analysis of Bray-Curtis similarities and the species accumulation rate indicated that the rate of fish community change decreased with time and that fish community structure changed little during the last several years of the study. By the end of the study, community structure was similar to that in a nearby cooling reservoir that supported diverse and resilient biota. Biomanipulation contributed to the rapid establishment of lentic species and later increases in small littoral and phytophilous species suggesting that biomanipulation may be useful in accelerating fish community development in new cooling reservoirs.     

The influence of fundamental design parameters on ciliates community structure in Irish activated sludge systems

The protozoan community in eleven activated sludge wastewater treatment plants (WWTPs) in the greater Dublin area has been investigated and correlated with key physio-chemical operational and effluent quality parameters. The plants represented various designs, including conventional and biological nutrient removal (BNR) systems. The aim of the study was to identify differences in ciliate community due to key design parameters including anoxic/anaerobic stages and to identify suitable bioindicator species for performance evaluation. BNR systems supported significantly different protozoan communities compared to conventional systems. Total protozoan abundance was reduced in plants with incorporated anoxic and anaerobic stages, whereas species diversity was either unaffected or increased. Plagiocampa rouxi and Holophrya discolor were tolerant to anoxic/anaerobic conditions and associated with high denitrification. Apart from process design, influent wastewater characteristics affect protozoan community structure. Aspidisca cicada was associated with low dissolved oxygen and low nitrate concentrations, while Trochilia minuta was indicative of good nitrifying conditions and good sludge settleability. Trithigmostoma cucullulus was sensitive to ammonia and phosphate and could be useful as an indicator of high effluent quality. The association rating assessment procedure of Curds and Cockburn failed to predict final effluent biological oxygen demand (BOD₅) indicating the method might not be applicable to treatment systems of different designs.