Photosensitivity of pigmented and nonpigmented strains ofUstilago violacea

White, pink, pumpkin, orange, and yellow strains ofUstilago violacea containing high and low levels of cytochrome c and various carotenes were subjected to high light intensities in the presence and absence of the endogenous photosensitizer toluidine blue (TB). The white strain 15.10 and the cytochrome-c-accumulating pink strain 1.C429 were completely lacking carotenes and were the most sensitive to visible light under all conditions. The phytoene-containing white strain 2.C419, the carotene-containing pink strains AB278a-1, 1.C421, and 2.C425, and pumpkin strain 2.C415 were more resistant to photodestruction in the presence and absence of TB than strains 15.10 and 1.C429. Consistently, the most light resistant strains were the high carotene, low cytochrome-c-accumulating orange, and yellow strains. The photosensitivity of strains ofU. violacea was related to the level of carotene, cytochrome c, the presence or absence of TB, and the age of the culture.     

The kinetics of photoinactivation and long-term photosensitivity of pigmented and nonpigmented strains of the smut fungusUstilago violacea

White, pink, pumpkin, and yellow strains ofUstilago violacea containing high and low levels of cytochrome c and various carotenes were subjected to high light intensities to characterize the kinetics of photoinactivation. Additionally, these strains were grown at two light intensities to characterize their long-term resistance to photoinactivation. The orange strain 2.D37291S and yellow strain 1.C2y had the highest carotene contents and were the most light resistant in the kinetics and growth experiments. The pink strains 2.C425, AB278a-1, and 1.C421 accumulated cytochrome c as well as carotenes. These strains were slightly more photosensitive than the yellow or orange strains in the kinetics experiment but were much more sensitive in the growth experiment. The phytoene-containing white strain 2.C419, which contains a small amount of cytochrome c, had a high level of resistance to light in the kinetics and growth experiments. The carotene-less strains were most sensitive in the kinetics experiment but not in the growth experiment. The overall photosensitivity ofU. violacea strains is related to the carotene and cytochrome c contents.     

Ultraviolet light sensitivity of carotene-and cytochrome-c-accumulating strains of the smut fungusUstilago violacea

White, pink, orange, and yellow strains ofUstilago violacea containing high and low levels of cytochrome c and various carotenes were exposed to ultraviolet light. The survival curves for all strains were of exponential decay form, but the carotene-accumulating strains were generally more resistant to UV than those strains with no carotenes at all. The UV exposure time leading to 90% loss in viability, LD₉₀, was quantitatively related to the carotene content in the form of a power function, where LD₉₀ increased as the fifth root of the total carotene content per cell. We also determined that the ratio of total carotenes to total cytochrome c per cell was quantitatively related to the rate of viability loss during UV exposure.     

Characterization of carotene accumulation inUstilago violacea using high-performance liquid chromatography

Quantitative analysis of carotene accumulation in white, pink, pumpkin, orange, and yellow haploid strains ofUstilago violacea by high-performance liquid chromatography indicated that specific patterns of carotene accumulation are primarily responsible for the white, pumpkin, orange, and yellow phenotypes. The yellow strains accumulated primarily -zeacarotene and -carotene. The white strains accumulated primarily the colorless carotene, phytoene, or did not accumulate any carotene at all. Carotene accumulation in pink haploid strains followed the same patterns as for the white, pumpkin, orange, or yellow strains. Pink diploid and disomic strains ofU. violacea with various parental combinations of the color mutations accumulated either cis--zeacarotene and -carotene or only -carotene. The pattern of carotene accumulation in conjunction with the available genetic information for the carotene loci inU. violacea was used as a basis for the construction of a new genetic model for carotene biosynthesis inU. violacea. The model employs three dehydrogenases and one cyclase for the synthesis of -carotene from phytoene, and accounts for the carotene accumulation patterns of either cis--zeacarotene and -carotene or lycopene, -carotene, and -carotene.     

Stable carbon isotope discrimination in the smut fungusUstilago violacea

Haploid strains 15.10, 1.C429, and 1.C2y and diploid strain JK2 ofUstilago violacea were grown on one or more of the following carbon sources: glucose, sucrose, maltose, inulin, starch, inositol, glycerol, casein, and yeast extract. The media, both before and after fungal growth, and the fungal cells were analyzed for ¹³C/¹²C content (δ¹³C values) using an isotope ratio mass spectrometer after combustion to CO₂. In all cases, the used and unused media had identical δ¹³C values. Strain 15.10 had significantly less¹³C than the media when grown on glucose, sucrose, maltose, and inositol; significantly more¹³C when grown on inulin, starch, and glycerol; and no significant difference in δ¹³C values when grown on casein and yeast extract media. Other haploid strains responded similarly to 15.10. Diploid strain JK2 was also depleted in¹³C when grown on glucose and enriched in¹³C when grown on glycerol; however, JK2 was slightly depleted in¹³C when grown on casein, whereas all the tested haploid strains were enriched in¹³C.     

Introduction and maintenance of prokaryotic DNA inUstilago violacea

Summary A strain of the basidiomycete,Ustilago violacea, was transformed with a prokaryotic plasmid, pMP4-1, which confers resistance to neomycin.U. violacea transformants were selected at a frequency of 5 per g pMP4-1 DNA. Such transformants were at least 8-fold more resistant to neomycin than was the untransformed recipientU. violacea. Enzyme activity associated with the neomycin resistance gene was also found in the transformants. Southern DNA-DNA hybridization detected pMP4-1-derived sequences in both nuclear and mitochondrially-associated DNAs from transformants. The patterns of hybridization suggested integration of pMP4-1 sequences into the respective genomes. DNA from the nuclear fraction ofU. violacea transformants failed to produceE. coli transformants resistant to neomycin or to carbenicillin. In contrast, DNA from the mitochondrially-associated fraction inU. violacea transformants producedE. coli transformants resistant to neomycin. TheE. coli transformants contained a pMP4-1-derivative, pWP8, which was subsequently shown by Southern blot analysis to harborU. violacea mitochondrial DNA. Thus, a prokaryotic plasmid can be used to transform the eukaryoteU. violacea and acquire endogenous sequences from this organism.     

Antigenic diversity of cytochromes c3 from the anaerobic,sulfate-reducing bacteria,Desulfovibrio

An indirect enzyme-linked immunoadsorption assay (ELISA) was developed for cytochrome c₃ using antisera to the cytochromes fromDesulfovibrio africanus Benghazi, Desulfovibrio vulgaris Hildenborough andDesulfovibrio salexigens British Guiana. The ELISA system was used to test for cross-reactions between these antisera and the heterologous antigens. In contrast to previous experiments using the Ouchterlony technique, all of the cytochromes c₃ tested exhibited some degree of cross-reaction. Considerable variation was seen in cross-reactions for cytochromes c₃ from differing strains ofD. desulfuricans. This observation raises questions about the taxonomic relatedness of these strains. No cross-reaction was seen with eukaryotic cytochrome c or withD. vulgaris cytochrome c₅₅₃. The data demonstrate that cytochrome c₃ is capable of undergoing nonprecipitating cross-reactions, and thus may not be as immunologically unique as was once thought.Abbreviations ELISA Enzyme-linked immunoadsorption assay     

Photoinactivation and long-term photosensitivity of diploid and disomic strains of the smut fungusUstilago violacea

Diploid and disomic strains ofUstilago violacea, containing high cellular concentrations of cytochrome c and various cellular concentrations of carotenes, were subjected to high levels of radiation from incandescent, fluorescent, and UV sources to characterize inactivation kinetics. Additionally, these strains were grown under high and low levels of radiation from the fluorescent and incandescent sources, to characterize their long-term resistance to photoinactivation by visible light with different spectral qualities. Survival kinetics in response to incandescent radiation were characterized by either an exponential decay for the low carotene strain, or an initial loss of viability, with recovery and a subsequent gradual loss of viability for the strains containing high carotene concentrations. Long-term colony survival was suppressed at the high incandescent level for the low carotene strain only. Long-term incandescent exposure did not affect the other strains. Survival kinetics in response to fluorescent and UV radiation were characterized as exponential decays for all strains, however, the exposure time leading to 90% loss in viability LD₉₀ was quantitatively related to carotene content in the form of a power function, where LD₉₀ increased as the total carotene content per cell. We also determined that the ratio of colored carotenes to cytochrome c in the cells was quantitatively related to the rate of viability loss during UV exposure. In all cases, including the long-term fluorescent experiment, the strains containing higher concentrations of carotenes were more resistant to destruction by the different radiation sources.     

Legionella bozemanii sp. nov. andLegionella dumoffii sp. nov.: Classification of two additional species ofLegionella associated with human pneumonia

Deoxyribonucleic acid (DNA) relatedness was used to distinguish strains ofLegionella-like organisms (LLO) fromLegionella pneumophila. Two of these LLO strains, WIGA and MI 15, showed sufficient DNA relatedness to one another to be classified in the same species. The nameLegionella bozemanii species nova is proposed for this new species. The type strain ofL. bozemanii is WIGA (=ATCC 33217) Two other LLO strains, NY 23 and Tex-KL, were shown to represent a new species. The nameLegionella dumoffii species nova is proposed for this species. The type strain ofL. dumoffii is NY 23 (=ATCC 33279). These two species joinL. pneumophila andL. micdadei in the genusLegionella.     

Genetic relationships among clinical and environmental isolates ofVibrio cholerae from Australia

DNA-DNA homology among twenty-nine isolates having the phenotypic properties ofVibrio cholerae was studied using the S1 endonuclease method. Ten strains ofV. cholerae O1 isolated from patients and from the environment in Australia showed greater than 88% homology with the neotype strain ofV. cholerae NCTC 8021. Strains of the non-O1 serotype isolated from a variety of clinical and environmental sources also showed a high level of relatedness, including four luminescent strains and a reference strain of the biotypealbensis. A group of sucrose-negative strains showed a low level of homology (40 to 43%) withV. cholerae, but 75% and 82% homology within the group.     

Purification and amino acid analysis of cytochrome c fromUstilago violacea

Cytochrome c fromUstilago violacea was further analyzed in order to characterize the pink phenotype. NaOH-extracted cytochrome c was purified in three steps, which included ammonium sulfate precipitation, CM-Sephadex ion-exchange chromatography with 0.5 N NaCl elution, and CM-Sephadex ion-exchange chromatography with a 0.0–0.6 N NaCl gradient elution. Polyacrylamide gel electrophoresis of the purified protein yielded a single red band, which was the only band detected upon Coumassie brilliant blue staining. HCl-hydrolysates of the protein were examined for their amino acid composition, which indicated that the cytochrome c fromU. violacea contains approximately 104 residues, with high levels of alanine, histidine, serine, and low levels of phenylalanine and arginine.     

Relationships among the bdellovibrios revealed by partial sequences of 16S ribosomal RNA

Members of the genusBdellovibrio possess the unifying phenotypic trait of attacking and preying upon other Gram-negative bacteria. It has been suggested that this common lifestyle arose by convergent evolution. Physiological and G + C studies have led to the notion that bdellovibrios are a heterogeneous group of loosely related bacteria. We have inferred the phylogenetic relatedness of 12 strains ofBdellovibrio through the analysis of partial 16S ribosomal RNA sequences. Similarity and degree of homology were assessed, and a phylogenetic tree was constructed by the distance matrix method. One branch of the two-branched tree consisted ofB. bacteriovorus and related strains (W, 6-5-S, 109, 109D, 109J, 114, HI Ox9-2, and HI Ox9-3). The other branch was itself branched, withB. starrii, B. stolpii, and marine strain BM4 in separate sub-branches. AllBdellovibrio strains in turn clustered with representatives of the delta division of theProteobacteria. The results indicate that there are at least two subdivisions of the genusBdellovibrio and that present-day bdellovibrios arose from a common ancestor. The placement of the genusBdellovibrio within the delta division of theProteobacteria was confirmed.     

A rapid identification method for aflatoxin-producing strains ofAspergillus flavus andA. parasiticus by ammonia vapor

The colony reverse of aflatoxin (AF)-producing strains ofAspergillus flavus andA. parasiticus turned pink when their cultures were exposed to ammonia vapor. The color change was visible for colonies grown on media suitable for AF production such as potato dextrose, coconut, and yeast extract sucrose agars after 2 d incubation at 25°C. Of the 120 strains ofA. flavus, A. parasiticus, and two related species inA. flavus group:A. oryzae andA. sojae tested in this study, only the AF-producing strains ofA. flavus andA. parasiticus showed the pink pigmentation. The color change occurred immediately after the colony was contacted with ammonia vapor. This method was useful for rapid screening the AF-producing strains ofA. flavus andA. parasiticus.     

A phenotypic and genetic study of sucrose nonfermenting strains ofVibrio mimicus andVibrio cholerae

Sixty-six strains unable to ferment sucrose and resemblingVibrio mimicus andV. cholerae were submitted to an extensive phenotypic characterization. DNA-DNA homology among selected strains and the type strain ofV. cholerae was studied by the S1 endonuclease method. Seven sucrose-negative strains were shown to have the phenotypic properties of and a high percentage DNA relatedness toV. cholerae and a low level of homology withV. mimicus. Eight luminescent strains phenotypically most closely resembledV. mimicus; however, two of these were shown to have a high level of DNA homology withV. cholerae and a low level of relatedness toV. mimicus. A single strain was found to be phenotypically and genetically unrelated to eitherV. cholerae orV. mimicus and may represent a new species. The remaining strains were phenotypically shown to beV. mimicus, and selected strains were shown to have a high percentage DNA homology withV. mimicus and a low level of homology withV. cholerae. Problems associated with the identification of these strains and differential traits are discussed.     

Similarities of genome deoxyribonucleic acids ofPseudomonas strains isolated from meat

A total of 29Pseudomonas strains from meat and 14 reference strains of differentPseudomonas species were studied by DNA-DNA hybridization. Of the field strains, 15 were phenotypically similar toP. fragi; the others represented a new group described by Molin and Ternström [4], phenotypically related toP. fragi and the fluorescent pseudomonads; 12 strains of this phenotype formed one major DNA-relatedness group; the type strain ofP. fragi together with nine field strains formed another group. The remaining eight meat isolates could not be assigned to either of the two groups. The intergroup relatedness and the relatedness of both groups to the fluorescent pseudomonads was about 50%. Hybridization data indicate that the phenotype of Molin and Ternström deserves species rank and that this tentative species andP. fragi belong to the group of fluorescent pseudomonads.     

Response of the Carrot Weevil,Listronotus oregonensis(Coleoptera: Curculionidae), to Strains ofBacillus thuringiensis

Mortality and frass production bioassays were used to investigate the toxicity of seven strains ofBacillus thuringiensisagainst the adult carrot weevil,Listronotus oregonensis(Le Conte). A semi-artificial diet of carrot foliage with 4% agar was selected to maximize feeding by the insects.Bacillus thuringiensissubsp.tenebrionis(Krieg, Huger, Langenbruch, and Schnetter) (BTT) and two unidentifiedB. thuringiensisstrains, A30 and A429, gave the lowest LC₅₀values. The frass bioassay supported the conclusions of the mortality assay. Mortality of adults continued after their removal from the insecticidal medium, with the highest mortality being caused by strains A429 and BTT. Survivors from the frass bioassay, initially exposed to strains A30, A429, and BTT, did not resume normal levels of feeding after their removal from the insecticidal medium.     

Serratia ficaria sp. nov., a bacterial species associated with Smyrna figs and the fig waspBlastophaga psenes

Fourteen strains isolated from figs, caprifigs, and fig wasps collected in California and Tunisia, and from a small black ant in France, constitute a new DNA hybridization group that is 25–56% related toSerratia species, and 6–17% related to other species of Enterobacteriaceae. This homogeneous group (90% relatedness within the group) constitutes a new species that is namedSerratia ficaria sp. nov. (type strain, ICPB 4050, ATCC 33105). Strains of this species have a characteristic odor, similar to that ofS: odorifera andPseudomonas perolens. No strain ofS. ficaria has yet been recovered from clinical specimens.     

Comparative studies of the quality of fresh and stored mushrooms of Agaricus bisporus with two tropical Agaricus bitorquis strains

Three white strains of mushroom were grown for quality assessment tests, a commercial Agaricus bisporus strain SOMYCEL U3 currently popular in most major mushroom producing countries and two tropical Agaricus bitorquis strains, ATCC 32675 and AGC W20. Mushrooms were harvested as stage 2 mushrooms (closed buttons with universal veil intact) and stored at 18°C (± 0.5°C) for 5 days during which time colour development, the rate of fruitbody maturation and weight loss were assessed. Throughout the storage period, a reflectance colormeter was used to monitor colour changes on the tops and sides of mushroom fruitbodies. The tops of both A. bitorquis strains were significantly more yellow than the A. bisporus strain, whereas the sides were significantly less yellow. Overall, the A. birorquis strain AGC W20 was clearly the least discoloured and least yellow at the time of harvest. Although all the three strains tested gave similar fresh weight losses during storage, i.e. approximately 10% per day, ATCC 32675 exhibited a very slow maturation rate. Both U3 and AGC W20 matured at a similar much faster rate forming open cups within the 5 day storage period. ATCC 32675 also showed the least increase in the degree of discolouration with time, whether readings were taken from the sides or tops of mushrooms. A breeding programme to combine the most salient features of AGC W20 (an intensely white mushroom at harvest, high yielding with distinct flush pattern) and ATCC 32675 (very slow maturation rate during storage) is suggested.     

Two strains ofVibrio cholerae non-O1 possessing somatic (O) antigen factors in common withV. cholerae serogroup O139 synonym “Bengal”

Two strains (O22 reference strain, 169–68, and strain 490–93 isolated from a patient with diarrhea in Thailand) ofVibrio cholerae non-O1 possessing somatic (O) antigen factors in common withV. cholerae O139 synonym Bengal are described. The O antigens of these two strains were closely related to that ofV. cholerae O139 in an a,b-a,c type of relationship, but were not completely identical with serogroup O139. Therefore, both these strains are not classified into the O139 serogroup ofV. cholerae, because they have their own major antigens. As the strain 490–93 could not be placed into any of the 154 established O serogroups ofV. cholerae, this strain was assigned to a new serogroup, O155. For practical use, the diagnostic antiserum prepared against the O139 reference strain (MO45, ATCC 51394) ofV. cholerae must be absorbed with reference strains 169–68 and 490–93 representing serogroups O22 and O155 ofV. cholerae to remove cross-reacting agglutinins of the O22 and O155 strains, respectively.     

Deoxyribonucleic acid relatedness among strains of the moderately halophilic speciesDeleya halophila

The genomic relatedness among 16 strains assigned to the moderately halophilic speciesDeleya halophila and other 20 representative strains of halophilic and nonhalophilic species was estimated by determination of deoxyribonucleic acid (DNA) base composition and by DNA-DNA hybridization studies. The guanine-plus-cytosine (G + C) base contents, determined from the melting temperature of DNAs ofD. halophila strains, were 66.0–68.8 mol %. DNA-DNA homology studies, determined by membrane filter technique, indicate that the 16 strains ofD. halophila comprise a genetically homogeneous group. High homology (70–100%) was obtained between the type strainD. halophila CCM 3662 and the otherD. halophila strains studied; however, very low DNA relatedness was found between the representative strains ofD. halophila and otherDeleya species (13-0%), as well as other moderately halophilic, marine, or nonhalophilic bacteria investigated.