Characterization of microsatellite loci in the endangered St. Vincent Parrot,Amazona guildingii

Microsatellite loci were isolated within the St Vincent parrot ( Amazona guildingii ), an endangered island endemic, from a GT_n enriched genomic library. Nine polymorphic loci were characterized varying from two to nine alleles per locus. Seven loci exhibited levels of heterozygosity ranging from 39 to 100% within the 28 individuals genotyped. Furthermore, the primers were demonstrated to cross‐amplify within four genera of Neotropical parrots, indicating the potential utility of these markers to further population‐level studies and conservation efforts of New World Psittacines.     

Phylogeny of Amazona barbadensis and the Yellow-Headed Amazon Complex (Aves: Psittacidae): A New Look at South American Parrot Evolution

The Yellow-shouldered Amazon (Amazona barbadensis) is the sole parrot of the genus Amazona that inhabits only dry forests. Its population has been dropping; therefore it has been the topic of many studies and conservation efforts. However, the phylogenetic relationship of this species to potential relatives classified within the Yellow-Headed Amazon (YHA) complex are still not clear. Therefore, we used more extensive data sets, including the newly sequenced mitochondrial genome of A. barbadensis, to conduct phylogenetic analyses. Various combinations of genes and many phylogenetic approaches showed that A. barbadensis clustered significantly with A. ochrocephala ochrocephala from Colombia and Venezuela, which created the Northern South American (NSA) lineage, clearly separated from two other lineages within the YHA complex, the Central (CA) and South American (SA). Tree topology tests and exclusion of rapidly evolving sites provided support for a NSA+SA grouping. We propose an evolutionary scenario for the YHA complex and its colonization of the American mainland. The NSA lineage likely represents the most ancestral lineage, which derived from Lesser Antillean Amazons and colonized the northern coast of Venezuela about a million years ago. Then, Central America was colonized through the Isthmus of Panama, which led to the emergence of the CA lineage. The southward expansion to South America and the origin of the SA lineage happened almost simultaneously. However, more intensive or prolonged gene flow or migrations have led to much weaker geographic differentiation of genetic markers in the SA than in the CA lineage.     

Reproductive potential of the earthworm Eisenia foetida

Summary Regression equations are provided for the earthworm Eisenia foetida with respect to age at which 50% of the population became clitellate at 25° C in relation to population density in activated sludge and in horse manure. Regression equations are provided for progeny per cocoon versus weight of cocoon, and weight of cocoon in relation to weight of parent; from these an equation is derived for progeny per cocoon relative to worm weight. Regression equations are given on (a) number of cocoons produced per adult in relation to age and population density from onset of adulthood to median peak production of cocoons, age 10 weeks, and from age 10 weeks to age 27 weeks, and (b) weight of worm in relation to population density and age between ages 5 and 27 weeks. From (a) and (b) a family of equations (c) are derived giving progeny per cocoon in relation to age of adult and population density. From equations (a) and (c) two families of equations are generated giving progeny per adult in relation to ascent to, and descent from, the median week of peak cocoon production in relation to population density. Data also are provided on age at which reproduction terminates in relation to population density, optimum population density for reproduction, and hatchability.     

Cryptic diversity and conservation units in the Bahama parrot

Wide application of genetic approaches has enhanced the detection of cryptic diversity, even in historically well-studied organisms. In addition to improving our knowledge of biodiversity, detection of cryptic diversity can have important management implications within imperiled groups, such as the Cuban parrot complex (Amazona leucocephala). Bahama parrots (A. l. bahamensis) were once widespread throughout the archipelago, but are now restricted to the two largest islands (Abaco and Inagua). Mitochondrial DNA-based population genetic and phylogenetic analyses revealed the distinctiveness of the Abaco, Inagua and now extirpated Acklins populations, detecting diagnostic character support and reciprocal monophyly indicative of three phylogenetic species. Congruent results were obtained for the Abaco and Inagua populations based on Bayesian clustering analyses of microsatellite genotypic data. Genetic signatures of demographic contraction were identified on Abaco, but not Inagua. These findings were consistent with lower genetics-based estimates of effective population size on Abaco, as well as the disproportionate human impacts reported on the island relative to Inagua. Overall, our results suggest that the taxonomy of the Cuban parrot complex requires revision and that the conservation status of the Abaco phylogenetic species should be immediately elevated to reflect its historical isolation, recent population decline and continued threats to its persistence.     

Reproductive correlation and mean-variance scaling of reproductive output for a forest model

We analyse the mean-variance scaling of reproductive output for a previously published forest model. The model relates individual reproductive effort and pollen limitation to the degree of synchrony in reproduction throughout a forest. We show that the exponent of Taylor's power law reflects the degree of synchrony of reproduction because it indicates the covariance of reproductive behavior. Further, we are able to relate the three components of masting, individual variability, population variability and synchrony in reproductive output, using Taylor's power law. Therefore Taylor's power law can be used as a synoptic index of masting.     

Reproductive output and duration of the pelagic larval stage determine seascape-wide connectivity of marine populations

Connectivity among marine populations is critical for persistence of metapopulations, coping with climate change, and determining the geographic distribution of species. The influence of pelagic larval duration (PLD) on connectivity has been studied extensively, but relatively little is known about the influence of other biological parameters, such as the survival and behavior of larvae, and the fecundity of adults, on population connectivity. Furthermore, the interaction between the seascape (habitat structure and currents) and these biological parameters is unclear. We explore these interactions using a biophysical model of larval dispersal across the Indo-Pacific. We describe an approach that quantifies geographic patterns of connectivity from demographically relevant to evolutionarily significant levels across a range of species. We predict that at least 95% of larval settlement occurs within 155?km of the source population and within 13 days irrespective of the species' life history, yet long-distant connections remain likely. Self-recruitment is primarily driven by the local oceanography, larval mortality, and the larval precompetency period, whereas broad-scale connectivity is strongly influenced by reproductive output (abundance and fecundity of adults) and the length of PLD. The networks we have created are geographically explicit models of marine connectivity that define dispersal corridors, barriers, and the emergent structure of marine populations. These models provide hypotheses for empirical testing.     

Characterisation of 13 microsatellite loci for the Moluccan Cockatoo, Cacatua moluccensis, and Cuban Amazon, Amazona leucocephala, and their conservation and utility in other parrot species (Psittaciformes)

The parrot family consists of approximately 330 species, many of which are endangered due to habitat destruction and illegal trade. Microsatellite markers can provide important tools for examining both conservation and forensic issues in this family, and the availability of additional markers will prove useful for studies of other species in the parrot family. Parrots have proved a difficult family from which to develop microsatellites and cross-species amplification is generally lower than expected. This paper details 13 microsatellite loci isolated from the Moluccan Cockatoo and Cuban Amazon and their conservation in other species of parrots.     

Lime-aluminium-phosphorus interactions and the growth of Leucaena leucocephala

The effects of lime and P on the chemical composition of the tropical legume Leucaena leucocephala were studied in a controlled climate laboratory experiment using 4 (Koronivia, Nadroloulou, Batiri, and Seqaqa) highly-weathered, acid soils from Fiji. For all soils, changes in the concentration of P in the Leucaena tops followed trends similar to the yield response curve, i.e., the concentration of P was highest at the soil pH at which maximum growth occurred. The concentration of Al in plant tops increased on either side of the pH of maximum growth, but Al uptake by the whole plant (tops plus roots) declined steadily with increasing pH. Although complete major (except P) and minor nutrients were added regularly, there was variation in the uptake of nutrients with pH. Poor growth at low pH values was attributed to an Al-induced P deficiency within the plant and at high pH to a soil P deficiency and, to a smaller extent, to the increased concentration of Al in the plant tops.     

Parrot conservation and ecotourism in the Windward Islands

The genus Amazona is represented on three islands in the Windward Islands. Since Europeans first visited the region in the fifteenth century, at least three parrot species have become extinct in the Windward Islands, and today all the extant parrots of the region are endangered. Several factors have contributed to the current plight of the parrots. The authorities in each of the islands of the Windward Islands that have endemic parrots have come to the realization that sound environmental management measures can complement rather than hinder national socioeconomic goals and objectives. Consequently, regional governments have begun to explore and foster linkages between conservation and other sectors of the economy. This article examines current parrot conservation efforts in the Windward Islands and the linkages which are being fostered between tourism and other sectors of the economy. Policy and research implications of the region's current parrot conservation efforts and ecotourism programme are also considered.     

A review of the taxonomic status and biology of the Cape Parrot Poicephalus robustus,with reference to the Brown-necked Parrot P. fuscicollis fuscicollis and the Grey-headed Parrot P. f. suahelicus

A review of the taxonomic status of the critically endangered Cape Parrot Poicephalus robustus Gmelin 1788 has important implications concerning the conservation of this species and illegal trade. It is distinguishable from the Brown-necked Parrot P. fuscicollis fuscicollis Kuhl 1820 on the morphometrics of the body and bill, two mitochondrial DNA sequences and its ecology and behaviour. The Grey-headed Parrot P. f. suahelicus Reichenow 1898 is geographically and genetically isolated from the other taxa. Grey-headed Parrots and Brown-necked Parrots are more closely related to each other than either is to the Cape Parrot. Geographically, the Grey-headed Parrot is marginally parapatric with the Cape Parrot, and this account focusses on these taxa. The Cape Parrot is a dietary specialist, and its diet differs from that of the Grey-headed Parrot, which has a wider trophic niche, although both feed on the kernels of unripe fruit. Their feeding behaviour changes in response to seasonally available food and may involve long distance movements. Both species share similar breeding habits, but they breed at different seasons in different habitat types. The two taxa have distinct habitat requirements and distributions. Cape Parrots inhabit, nest and feed in Afromontane mixed Podocarpus forest above 1 000m asl in South Africa, whereas Grey-headed Parrots inhabit a wide range of lowland woodland habitats across south-central Africa. In parapatry, there is no record of hybridisation, probably because of spatial (geographical and altitudinal) and temporal segregation (different breeding seasons). On the basis of these criteria, the Cape Parrot is, and must be recognised, as an independent species.     

The relationships of Heberdenia bahamensis and H. penduliflora (Myrsinaceae)

A morphological and anatomical investigation is presented of the two species of Heberdenia, H. bahamensis (Macaronesia) and H. penduliflora (Mexico). A cladistic analysis including 27 taxa of the Myrsinaceae and using Jacquinia (Theophrastaceae) and Manilkara (Sapotaceae) as outgroup was performed to provide a hypothesis of the relationships of the two species of Heberdenia. It was concluded that H. bahamensis and H. penduliflora are not more closely related to each other than either is to many other species of the Myrsinaceae, and that they should not be referred to the same genus. Heberdenia bahamensis appears to be most closely related to the Old World genera Pleiomeris, Embelia , and Grenacheria , whereas H. penduliflora is nested within Ardisia s. L , possibly being most closely related to the segregate genus Gentlea. It is suggested that H. penduliflora is probably best referred to a genus of its own.     

Reproductive potential predicts longevity of female Mediterranean fruitflies

Reproduction exacts a price in terms of decreased survival. Our analysis of the interplay between age patterns of fecundity and mortality for individual female medflies (Ceratitis capitata) revealed that individual mortality is associated with the time-dynamics of the egg-laying trajectory. In a sample of 531 medflies, we found that each individual has a characteristic rate of decline in egg laying with age. This defines an individual's rate of reproductive exhaustion. This rate was shown to predict subsequent mortality The larger the remaining reproductive potential, the lower the subsequent mortality An increased mortality risk was seen in flies for which egg production declined rapidly early on, irrespective of the level of egg production. Thus, reproductive potential and lifetime are coupled in such a way that those flies which are able to profit most from an extended life span in terms of increased egg output are indeed likely to live longer.     

A novel cellular automata approach: seed input/output of the alien species Leucaena leucocephala in the soil and the effects of climate changes

The potential impact of the soil seed bank of a given species and subsequent population persistence will depend on the robustness of the seeds against depletion. Invasiveness is frequently linked to this behavior and successful control of invasive species depends on reducing the size of their seed banks. We propose a hybrid model that simulates the seed bank dynamics in association with their physical dormancy (PD) based on experimental data on seed bank depletion of a Leucaena leucocephala population during the dispersal phase. The hybrid model uses cellular automata (CA) and Monte Carlo techniques. The sensitivity analysis revealed that the model delivers reproducible and reliable results. Then, we discuss the ability of the hybrid model to predict the effect of seasonal climate change. A 2.0 °C increase in temperature was enough to cause a considerable impact in the seed depletion curve, and after 1 year, ~?75% of the seeds had already disappeared from the seed bank. The proposed hybrid CA model can be used to study soil-stored seed banks with physical dormancy, and could be applied to other Fabaceae species with similar seed traits. We believe that this computational model contributes to a better understanding of seed bank dynamics and will aid in the control of invasive species and for testing different scenarios to reduce or eliminate seed banks that have already been formed.

     

Breeding biology of the Cape Parrot,Poicephalus robustus

Breeding biology and nesting requirements of Cape Parrots in their natural habitat and in captivity were investigated. Few nests were found, suggesting that nest-sites are limiting, and that the parrots have specific nesting requirements. Nests were secondary cavities in dead Podocarpus spp. (branches), high up in forest canopy trees. Breeding usually occurred from August to February, but was observed in other months, particularly in captive birds. Clutch size varied from 2–5, incubation was by the female and lasted 28–30 days, with fledging a further 55–79 days. In captive birds the ovaries are mature at 2.5 years, but age at first breeding is usually at 4–6 years.     

Core and Shell Song Systems Unique to the Parrot Brain

The ability to imitate complex sounds is rare, and among birds has been found only in parrots, songbirds, and hummingbirds. Parrots exhibit the most advanced vocal mimicry among non-human animals. A few studies have noted differences in connectivity, brain position and shape in the vocal learning systems of parrots relative to songbirds and hummingbirds. However, only one parrot species, the budgerigar, has been examined and no differences in the presence of song system structures were found with other avian vocal learners. Motivated by questions of whether there are important differences in the vocal systems of parrots relative to other vocal learners, we used specialized constitutive gene expression, singing-driven gene expression, and neural connectivity tracing experiments to further characterize the song system of budgerigars and/or other parrots. We found that the parrot brain uniquely contains a song system within a song system. The parrot “core” song system is similar to the song systems of songbirds and hummingbirds, whereas the “shell” song system is unique to parrots. The core with only rudimentary shell regions were found in the New Zealand kea, representing one of the only living species at a basal divergence with all other parrots, implying that parrots evolved vocal learning systems at least 29 million years ago. Relative size differences in the core and shell regions occur among species, which we suggest could be related to species differences in vocal and cognitive abilities.