Tooth components of mandibular deciduous molars of Homo sapiens sapiens and Homo sapiens neanderthalensis: a radiographic study.

Tooth components of deciduous molars were measured from standardized radiographs of Homo sapiens sapiens and Homo sapiens neanderthalensis. Enamel height and width were greater in deciduous teeth of Homo sapiens sapiens than in Homo sapiens neanderthalensis and the differences were statistically significant (p less than 0.01). Dentin height showed no significant differences between the two groups, but enamel to floor of pulp chamber and pulp height and width dimensions were significantly greater in Homo sapiens neanderthalensis. Discriminant analysis carried out between groups, using deciduous tooth components, showed an accuracy of 98-100% for identification of Homo sapiens sapiens and 83-92% for identification of Homo sapiens neanderthalensis. The results obtained in this study on dental dimensions support the hypothesis of a distinct evolutionary line for Neanderthals.     

Shape analysis of the mid-sagittal craniogram in some European middle and upper-Paleolithic adult and subadult crania

In order to evaluate the lateral shape contour of the Neanderthal cranium, the mid-sagittal profiles (glabella-opisthocranion) in adult and subadult Neanderthal remains were examined and compared with those of other specimens of fossil Homo. Size normalized boundaries were digitally acquired as ordered series of coordinates; the series of the distances from the glabella opisthocranion axis, was decomposed in Fourier polynomials; the extracted amplitudes and phase angles were used as variables to carry out multivariate discriminant analysis (PCA). The first and the second components accounted for 70% of the total variance. Neanderthal and European Upper Paleolithic subadults differ from adults of their respective groups: the subadult Homo sapiens are more similar to the adult, as the element characterizing the group is constituted by a steep craniogram with a noticeable equilibrium between the anterior and posterior district. In Neanderthal subadults, the adult model seems partially delineated and the mature cranial architecture is reached trough a phase of local allometric differentiation.     

中国直立人牙齿特征变异及其演化意义

以往研究发现,中国直立人化石呈现较大的形态变异。对于这种变异程度及造成变异的原因,在古人类学界有不同的认识。有学者提出在直立人阶段,中国古人类已经呈现明显的区域性差异,但也有人认为这些差异似乎没有规律性。近年,本文作者采用不同方法对若干地点的中国直立人牙齿特征及其变异进行了系列研究,取得了一些新的发现和认识。本文在回顾总结这些研究的基础上,结合对其它一些地点中国直立人牙齿特征的观测对比,对中国直立人牙齿特征表现特点及变异作了进一步的分析。本研究发现,中国直立人牙齿特征具有较大的变异范围。这些变异似可分为两种主要类型,元谋、建始、郧县梅铺、和县牙齿呈现出较多的原始特点,代表一种原始类型;周口店、沂源等地点的标本特征相对进步,表现出更多的典型直立人特征。其它一些地点的直立人化石呈现出混合或中间状态。值得注意的是部分呈现出原始牙齿特征类型的中国直立人的生存年代相对较晚,其牙齿特征的原始性与生存时代不具有对应关系。作者认为中国直立人牙齿特征类型反映了更新世早期和中期不同直立人群的演化状态。原始类型牙齿特征的形成不仅与演化时序性和地理分布有关,还在一定程度上反映了一些中国直立人群的演化隔离。     

Cranial capacity evolution in Homo erectus and early Homo sapiens.

This paper investigates patterns of cranial capacity evolution in Homo erectus, early Homo sapiens, and in regional subsamples of H. erectus. Specifically, models explaining evolution of cranial capacity in these taxa are evaluated with statistical techniques developed for the analysis of time series data. Regression estimates of rates of evolution in cranial capacity are also obtained. A non-parametric test for trend suggests that cranial capacity in both H. erectus and early H. sapiens may increase significantly through time. Cranial capacity in an Asian subsample of H. erectus (comprised of Chinese and Indonesian specimens) increases significantly through time. Other subsamples of H. erectus (African, Chinese, and Indonesian) do not appear to increase significantly through time. Regression results generally corroborate results of the test for trend. Spatial and temporal variation may characterize evolution of cranial capacity in H. erectus. Different patterns of cranial capacity evolution may distinguish H. erectus from early H. sapiens.     

Midsagittal cranial shape variation in the genus Homo by geometric morphometrics

Midsagittal profiles of crania referred to different taxa of the genus Homo have been analyzed by geometric morphometric techniques. Comparisons between single specimens using the thin-plate-spline function suggest a generalized reduction of the lower face, associated with antero-posterior development of the braincase occurring (possibly in parallel evolution) along distinct human lineages. Furthermore, Neandertals display a projection of the midface, and modern humans show a derived globularity of the vault associated with midsagittal parietal bulging. Principal Component Analysis demonstrates a bimodal pattern of variation, which describes an "archaic" pole (rather heterogeneous in terms of taxonomy) clearly distinguishable from the modern one. The first two principal components - that explain together 80% of the total variance in shape - involve respectively fronto-parietal expansion and midfacial prognathism. These results contribute to identify different structural patterns in human evolution, supporting discontinuity rather than continuity of cranial shape among different taxa of the genus Homo, especially when considering the differences between Neandertals and early modern humans.     

The changing face of genus Homo

Since its introduction in the 18th century, the genus Homo has undergone a number of reinterpretations, all of which have served to make it a more inclusive taxon. In this paper, we trace this trend towards greater inclusiveness, and explain how it has affected the way Homo is defined. We then demonstrate that the current criteria for identifying species of Homo are difficult, if not impossible, to operate using paleoanthropological evidence. We discuss alternative, verifiable, criteria, and show that when these new criteria are applied to Homo, two species, Homo habilis and Homo rudolfensis, fail to meet them. We contend that the lowest boundary of Homo should be redrawn so that the earliest species in the genus is Homo ergaster, or early African Homo erectus. The appearance of this species at around 1.9 Myr appears to mark a distinct shift in hominin adaptive strategy involving morphological and behavioral innovations.     

Fourier analysis of facial profiles of young twins

Twins studies provide a powerful approach to determining the relative contribution of genetics and environment to observed variation. Such studies assume trait differences in monozygous (MZ) twins are due to environmental factors and those in dizygous (DZ) twins are due to both genetic and environmental factors. This study quantitated facial profiles of twins using Fourier equations, determining their value in profile analysis and the assessment of the genetic contribution to facial shape. Standardized profile slide photographs of 79 pairs of 4-6 year-old twins (37 MZ pairs, 42 DZ pairs) were scanned and x and y coordinates were extracted from each profile using sellion and Camper's plane as references. The coordinates were subjected to Fourier analysis and the normalised vertex projection coefficients were studied. The means of the differences between coefficients for MZ co-twins did not differ significantly from that of DZ co-twins, although the DZ group showed higher mean differences in the higher harmonics. Subjective examination of superimposed reconstructions showed wider variation between DZ co-twins than MZ co-twins. Correct classification of twins by discriminant function analysis using Fourier coefficients was similar for both groups (MZ: 70.3%; DZ: 73.8%). Fourier analysis could quantitate facial profiles of young children and differentiate some details, but was unable to discriminate between genetic and environmental influences, and any possible interactions between these influences, on their overall facial profiles at this developmental stage.     

Dental microwear and diets of African early Homo

Conventional wisdom ties the origin and early evolution of the genus Homo to environmental changes that occurred near the end of the Pliocene. The basic idea is that changing habitats led to new diets emphasizing savanna resources, such as herd mammals or underground storage organs. Fossil teeth provide the most direct evidence available for evaluating this theory. In this paper, we present a comprehensive study of dental microwear in Plio-Pleistocene Homo from Africa. We examined all available cheek teeth from Ethiopia, Kenya, Tanzania, Malawi, and South Africa and found 18 that preserved antemortem microwear. Microwear features were measured and compared for these specimens and a baseline series of five extant primate species (Cebus apella, Gorilla gorilla, Lophocebus albigena, Pan troglodytes, and Papio ursinus) and two protohistoric human foraging groups (Aleut and Arikara) with documented differences in diet and subsistence strategies. Results confirmed that dental microwear reflects diet, such that hard-object specialists tend to have more large microwear pits, whereas tough food eaters usually have more striations and smaller microwear features. Early Homo specimens clustered with baseline groups that do not prefer fracture resistant foods. Still, Homo erectus and individuals from Swartkrans Member 1 had more small pits than Homo habilis and specimens from Sterkfontein Member 5C. These results suggest that none of the early Homo groups specialized on very hard or tough foods, but that H. erectus and Swartkrans Member 1 individuals ate, at least occasionally, more brittle or tough items than other fossil hominins studied.     

Dental topography and diets of Australopithecus afarensis and early Homo

Diet is key to understanding the paleoecology of early hominins. We know little about the diets of these fossil taxa, however, in part because of a limited fossil record, and in part because of limitations in methods available to infer their feeding adaptations. This paper applies a new method, dental topographic analysis, to the inference of diet from fossil hominin teeth. This approach uses laser scanning to generate digital 3D models of teeth and geographic information systems software to measure surface attributes, such as slope and occlusal relief. Because it does not rely on specific landmarks that change with wear, dental topographic analysis allows measurement and comparison of variably worn teeth, greatly increasing sample sizes compared with techniques that require unworn teeth. This study involved comparison of occlusal slope and relief of the lower second molars of Australopithecus afarensis (n=15) and early Homo (n=8) with those of Gorilla gorilla gorilla (n=47) and Pan troglodytes troglodytes (n=54). Results indicate that while all groups show reduced slope and relief in progressively more worn specimens, there are consistent differences at given wear stages among the taxa. Early Homo shows steeper slopes and more relief than chimpanzees, whereas A. afarensis shows less slope and relief than any of the other groups. The differences between the two hominin taxa are on the same order as those between the extant apes, suggesting similar degrees of difference in diet. Because these chimpanzees and gorillas differ mostly in fallback foods where they are sympatric, results suggest that the early hominins may likewise have differed mostly in fallback foods, with A. afarensis emphasizing harder, more brittle foods, and early Homo relying on tougher, more elastic foods.     

Limb length and locomotor biomechanics in the genus Homo: an experimental study

The striking variation in limb proportions within the genus Homo during the Pleistocene has important implications for understanding biomechanics in the later evolution of human bipedalism, because longer limbs and limb segments may increase bending moments about bones and joints. This research tested the hypothesis that long lower limbs and tibiae bring about increases in A-P bending forces on the lower limb during the stance phase of human walking. High-speed 3-D video data, force plates, and motion analysis software were used to analyze the walking gait of 27 modern human subjects. Limb length, as well as absolute and relative tibia length, were tested for associations with a number of kinetic and kinematic variables. Results show that individuals with longer limbs do incur greater bending moments along the lower limb during the first half of stance phase. During the second half of stance, individuals moderate bending moments through a complex of compensatory mechanisms, including keeping the knee in a more extended position. Neither absolute nor relative tibia length had any effect on the kinetic or kinematic variables tested. If these patterns apply to fossil Homo, groups with relatively long limbs (e.g. H. ergaster or early H. sapiens) may have experienced elevated bending forces along the lower limb during walking compared to those with relatively shorter limbs (e.g. the Neandertals). These increased forces could have led to greater reinforcement of joints and diaphyses. These results must be considered when formulating explanations for variation in limb morphology among Pleistocene hominins.     

Distinctive amino acid residue periodicities in terminal sequences of type III and type I secreted proteins from proteobacteria

The Fourier transform (FT) method was applied to specify the distribution of 14 predefined groups of amino acids (64 residues) at both termini of annotated type III and type I secreted proteins from proteobacteria. Type I proteins displayed a higher occurrence of significant periodicities at both C-and N-termini, indicating potent features to discriminate between secretion types, particularly by the use of variables selected from the full periodicity profiles at 19 orders of FT. The Fishers linear discriminant analysis, together with the stepwise selection of variables throughout equal pairs of combinations for all predefined groups of residues, revealed the C-terminal harmonics of aromatic (HFWY) and aliphatic (VLIA) residues as a set of strong predictor variables to classify both types of secreted proteins with an accuracy of 100% for original grouped cases and 96.4% for cross-validated grouped cases. The prediction accuracy of proposed discriminant function was estimated by repeated k-fold cross-validation procedures where the original data set was randomly divided into k subsets, with one of the k-subsets serving as the test set and the remaining data forming the training set. The average error rate computed across all k-trials and repeats did not exceed that of leave-one-out procedure. The proposed set of predictor variables could be used to assess the compatibility between secretion pathways and secretion substrates of proteobacteria by means of discriminant analysis.     

The size of scalable brain components in the human evolutionary lineage: with a comment on the paradox of Homo floresiensis.

The discovery of a diminutive, small-brained hominin skeleton (LB1) from the Pleistocene of Flores, Indonesia, seems to present a paradox concerning the interpretation of overall brain size in an evolutionary context. This specimen forms the holotype of a purportedly new hominin species, Homo floresiensis. As inferred from the archaeological record, it has been suggested that this species of Homo, existing as recently as 12,000 years ago, engaged in sophisticated cultural behaviors with an adult brain size equivalent to that seen in modern chimpanzees and one that in modern humans would be defined as "high degree microcephaly" and "always associated with idiocy". The alternative explanation for these behaviors at the observed brain size would require that H. floresiensis deviate from existing patterns of primate brain scaling at either a macroscopic or microscopic level. Here we develop predictive equations and confidence intervals for estimating the size of various brain components in the human evolutionary lineage by calculating scaling relationships among overall brain size and 11 components of the primate brain using phylogenetically independent contrasts (PIC) methods. Using these equations, paleoanthropologists can: (a) estimate brain component size (and confidence intervals) for any primate in the fossil record if overall brain size is known; and (b) calculate some reasonable outside limits as to how far species-specific departures from allometric constraints (i.e., brain "reorganization") can be taken in assessing human brain evolution. We conclude that if the original assessment of LB1 is correct, i.e., that it samples a population from a new species of Homo, H. floresiensis, that was capable of Homo sapiens-like cultural attributes (fire, blade manufacturing, etc.), while having a chimpanzee-sized brain, then we are faced with the paradox that 1 cm(3) of H. floresiensis brain could not be functionally equivalent to 1cm(3) of a modern human or modern chimpanzee brain.     

Determination of ultrasound phase velocity in trabecular bone using time dependent phase tracking technique

Ultrasound velocity is one of the key acoustic parameters for noninvasive diagnosis of osteoporosis. Ultrasound phase velocity can be uniquely measured from the phase of the ultrasound signal at a specified frequency. Many previous studies used fast Fourier transform (FFT) to determine the phase velocity, which may cause errors due to the limitations of FFT. The new phase tracking technique applied an adaptive tracking algorithm to detect the time dependent phase and amplitude of the ultrasound signal at a specified frequency. This overcame the disadvantages of FFT to ensure the accuracy of the ultrasound phase velocity. As a result, the new method exhibited high accuracy in the measurement of ultrasound phase velocity of two phantom blocks with the error less than 0.4%. 41 cubic trabecular samples from sheep femoral condyles were used in the study. The phase velocity of the samples using the new method had significantly high correlation to the bulk stiffness of the samples (r = 0.84) compared to the phase velocity measured using fast Fourier transform FFT (r = 0.14). In conclusion, the new method provided an accurate measurement of the ultrasound phase velocity in bone.     

Use of the canonical discriminant analysis to select SNP markers for bovine breed assignment and traceability purposes

Several market research studies have shown that consumers are primarily concerned with the provenance of the food they eat. Among the available identification methods, only DNA‐based techniques appear able to completely prevent frauds. In this study, a new method to discriminate among different bovine breeds and assign new individuals to groups was developed. Bulls of three cattle breeds farmed in Italy – Holstein, Brown, and Simmental – were genotyped using the 50K SNP Illumina BeadChip. Multivariate canonical discriminant analysis was used to discriminate among breeds, and discriminant analysis (DA) was used to assign new observations. This method was able to completely identify the three groups at chromosome level. Moreover, a genome‐wide analysis developed using 340 linearly independent SNPs yielded a significant separation among groups. Using the reduced set of markers, the DA was able to assign 30 independent individuals to the proper breed. Finally, a set of 48 high discriminant SNPs was selected and used to develop a new run of the analysis. Again, the procedure was able to significantly identify the three breeds and to correctly assign new observations. These results suggest that an assay with the selected 48 SNP could be used to routinely track monobreed products.     

The nature and basis of sexual dimorphism in the primate skeleton

This study sets out to document and analyse sexual dimorphism in the teeth and bones of five primate groups, including man. Specimens were only included in the analysis if their sexual attribution was reliable and was based on non-osteological criteria. Ninety raw measurements, both cranial and post-cranial, were used and 11 indices were computed from them.
The parameters of each sample were computed in order to compare these results with previous estimates of dimorphism which have not always been based on reliably sexed samples. Correlation matrices were computed.
The overall sex differences were subdivided into "shape" and "size" components using Penrose's size and shape distances and by computing the principal components of each data set. The visually apparent shape differences were confirmed metrically and then examined to see whether they could be explained by allometric effects or whether there was evidence for sexual differences in growth patterns.
Using femur length as the independent variable, because of its correlation with overall size, allometric coefficients were computed for the logarithmically transformed data. The coefficients were in some cases very different between sexes but the majority did not achieve statistical significance. Of those that were significantly different only in Homo did such differences narrowly exceed the number that would be expected by chance alone.
As the vast majority of allometric coefficients for the pooled male and female data differed from unity, the hypothesis that most of the considerable shape differences that exist between some male and female primates are due to underlying growth differences must be rejected. It is suggested that such differences are simply the result of disproportionate change in size.     

Patterning of geographic variation in Middle Pleistocene Homo frontal bone morphology

A quantitative assessment of the frontal bone morphology of a sample of Middle Pleistocene hominins was undertaken in order to address questions regarding their population structure and evolutionary history. Outline tracings of the frontal bones of forty-seven fossil crania were obtained, and size-standardized measurements were then computed using an Elliptical Fourier analysis of these tracings. Principal component scores of the Fourier harmonic amplitudes were derived and served as a quantitative representation of the morphology of the frontal bone. Morphological, geographical, and temporal distance matrices were then constructed between each pair of fossils. A partial Mantel matrix correlation test was performed between morphological and geographical distance matrices, controlling for temporal distance, in order to determine if the pattern of geographical differentiation in features of the frontal bone of mid-Pleistocene Homo followed that of an isolation-by-distance model of population structure. The results of the partial Mantel tests indicate that the overall patterning of differentiation in the features of the frontal bone cannot best be explained by a population structure shaped by isolation-by-distance. Additionally, various aspects of the frontal bone quantified here follow different patterns of geographical differentiation, suggesting that a mosaic pattern of evolution holds true for characters within one cranial region and not just for those between regions.