Spatiotemporal Variation in Shallow-Water Freshwater Fish Distribution and Abundance in a Large Subtropical Coastal Lagoon

Patos Lagoon is located off the southern Brazilian coast and represents one of the largest coastal lagoons in the world. We estimated hydrological and physicochemical conditions associated with spatial variation in the abundance and diversity of freshwater fishes along the lagoon, and inter-annual variability in abundances of freshwater fishes occurring in its estuarine zone. During our study, the region experienced two periods of average rainfall and two periods with above-average rainfall. The characids Astyanax eigenmaniorum and Oligosarcus jenynsii and the siluriform Parapimelodus nigribarbis were the most abundant freshwater fishes in the estuary during wet periods when water levels were higher and salinity was lower. Increases in abundance of these species in the estuarine area, all of which members of primary-division freshwater families, apparently were associated with pulses of reproduction and passive transport from freshwater habitats located near middle and upper lagoon reaches. Abundance of species from secondary freshwater families, such as poeciliids and cichlids, were less correlated with hydrological conditions, and their patterns of occurrence in the estuary suggest active migration from nearby freshwater habitats draining into this area. Findings indicate that freshwater discharge in the basin and expansion/retraction of freshwaters in the middle-upper lagoon determined patterns of freshwater fish abundance and species richness in the estuarine zone.     

Larval fish assemblage recovery: a reflection of environmental change in a large degraded river

Estuaries are globally important to fisheries but face many anthropogenic stressors that reduce water quality and degrade benthic habitat. The Maumee River estuary has been degraded by industrial contaminants, high sediment and nutrient loads, channelization and elimination of surrounding wetlands, lessening its value as spawning habitat for fishes of Lake Erie. Regulation and better management practices (BMPs) in the watershed have improved the water quality in this estuary, which should result in a response of the biotic community. We compared recent (2010/2011) larval fish assemblage data to similar data from the 1970s (1976/1977) in order to identify changes due to improved water and habitat quality. Family‐level diversity was greater in recent study years compared to the 1970s and family richness increased from 6 to 10. In addition, the abundance of lithophilic spawning fishes was significantly greater in the recent study years. Increased diversity and family richness were consistent with increased water quality in the Maumee River whereas the observed increase in abundance of lithophilic spawners was consistent with an increase in the amount or quality of benthic habitat used by species in these families for spawning. Better wastewater management and agricultural practices in coastal watersheds can benefit the early life stages of fishes, thus benefitting coastal fisheries. Furthermore, larval fish assemblages may be useful indicators of biological integrity because of their sensitivities to environmental change. Routine sampling of estuarine larval fish assemblages could provide practitioners with insight into ecosystem changes and measure the response of the biotic community to restoration.     

Arbuscular mycorrhizal relations of mangrove plant community at the Ganges river estuary in India

Mangroves are climax formation of hydrohalophytes inhabiting estuarine or marine salt marshes in the tropics and subtropics. As a terrestrial plant community inhabiting tidally inundated estuarine or marine sediments, mangroves show considerable adaptation to salinity, water-logging and nutrient stress. Thirty-one species of mangrove and mangrove associates and 23 species of transported flora, belonging to 25 families at four physiographic stages of succession of the mangrove plant community at the terminal part of the Ganges river estuary in India were examined for arbuscular mycorrhizal (AM) root association. Dominant members of the mangrove plant community were all AM, mostly with 'Paris' type structures. Many of the known non-mycotrophic plant families, except the Cyperaceae, also showed AM association, with intracellular hyphae and vesicles as the most discernible endophyte structures. Intensity of AM colonization varied both with the species and situations of their occurrence, being more intense and also more extensive in less saline dry ridge mangroves than in more saline formative and developed swamp mangroves. Introduced exotic trees on the ridges and embankments were infected by AM, but less than the declining mangroves in the same location. Seven species of AM fungi in common with those of the upstream mesophytic plants were isolated from root-free rhizosphere soils of the mangroves, three of which predominated in root association. These species, individually and as mixtures, infected roots of salinity tolerant herbs and trees in both locational silt and upstream alluvial soil with obvious improvements in their biomass yield and phosphorus nutrition. AM infective potential of root-free rhizosphere soils of the dominant members of the mangrove community were negatively related to salinity level of the sediment soil of the successional stages. The evidences of AM association of mangroves and other salt marsh plants obtained here and those reported elsewhere are discussed.     

Spatial and seasonal patterns in freshwater ichthyofaunal communities of a tropical high island in Fiji

We surveyed freshwater ichthyofaunal communities in streams of Vanua Levu, Fiji, under a range of land cover to assess differential, seasonal effects on fish abundance and diversity. We collected fish from 32 families, 19 genera and 87 species, representing approximately 50% of the known Fijian freshwater and estuarine fish fauna. Position in reach was the strongest overall factor influencing fish abundance and diversity, particularly in the larger, steeper catchments. However, fish communities exhibited strong seasonal specificity with over half (55%) of species observed in only one season. There were greater numbers of estuarine and marine migrants and fishes with poor swimming ability in the dry season, with more schooling species, large predators and fish that prefer muddy benthos in the wet. In the more pristine catchments of Kubulau District, higher species abundance and diversity were observed in the wet season and were associated with significantly greater flow, pH and dissolved oxygen. We observed the opposite pattern for fish diversity and abundance from the more degraded catchments of Macuata Province. These results suggest that the wet season is having a net positive effect on habitable space for fishes in Kubulau and a net negative effect in Macuata, as species may be lost due to increased runoff from heavily cleared and cultivated catchments. Integrated water resource management across the full range of habitats utilized by Fiji’s freshwater fishes is recommended in order to maintain species diversity and abundance.     

Geographical and typological changes in fish guilds of South African estuaries

A comparative analysis of fish estuary association guilds was undertaken on some 190 South African estuaries. This pioneering study spanned three zoogeographic regions and included three broad estuarine types. The guild compositions of the estuaries were compared based on an importance value, incorporating taxonomic composition, numerical abundance and relative biomass. Multivariate analyses included both inter‐regional (zoogeographic) and intra‐regional (estuarine typology) comparisons. The major estuary‐associated guilds (estuarine species and marine migrant species) were important in all estuary types within all biogeographic regions. Significant differences both between regions and between estuary types within regions, however, were recorded. Cool–temperate estuaries were generally dominated by migratory species (estuarine migrants and marine migrant opportunists) while the importance of species dependent on estuaries (estuarine residents and estuarine‐dependent marine migrants) was higher in warm–temperate and subtropical regions. The significance of estuarine nursery areas, particularly in regions where estuaries are few in number, is highlighted. In terms of typology, migratory species assumed a greater importance in predominantly open systems, while freshwater and estuarine‐resident species were more important in predominantly closed systems. Predominantly closed estuaries, however, were also important for marine migrant species, which further highlights the significance of these systems as nursery areas for fishes.     

广西北海西村港互花米草对红树林湿地大型底栖动物群落的影响

为了解互花米草(Spartina alterniflora)入侵红树林的生态影响, 作者对位于北海市西村港的红树林湿地以及周边互花米草盐沼的大型底栖动物群落多样性和群落结构进行了研究。2012年10月至2013年9月连续4次取样, 按照取样时间研究大型底栖动物的种类、物种组成、生物量和生物多样性等群落特征的差异, 探讨互花米草入侵红树林湿地对大型底栖动物的影响。本研究共采集底栖动物16种, 隶属于5门7纲15科, 其中互花米草群落10种, 红树林湿地12种。研究发现互花米草入侵后中国绿螂(Glauconome chinensis)个体数量剧增, 导致不同采样时间互花米草盐沼的大型底栖动物生物量均显著高于红树林湿地; 除个别月份外, 红树林湿地大型底栖动物的Margalef丰富度指数、Shannon-Wiener多样性指数、Simpson多样性指数和Pielou均匀度指数均显著高于互花米草群落。基于生境-采样时间的双因素方差分析结果表明, Shannon-Wiener多样性指数和Simpson指数在两种生境间差异显著; 两种生境的Margalef丰富度和Pielou均匀度指数在不同采样时间差异显著; 大型底栖动物生物量和物种数量在两种生境间和不同采样时间差异均显著。基于多元回归分析的研究结果表明, 互花米草密度是影响大型底栖动物生物量的关键因子, 而互花米草株高可以解释物种个体数量、Shannon-Wiener多样性指数和Simpson指数在两种生境的变化。对不同采样时间大型底栖动物群落结构的非度量多维度(non-metric multidimensional scaling, NMDS)分析结果表明, 红树林与互花米草群落的大型底栖动物群落相似性很低。总而言之, 在西村港地区, 互花米草入侵虽然增加了大型底栖动物的生物量, 但由于优势物种的凸显, 显著降低了大型底栖动物群落的多样性, 且种类组成与群落结构与红树林群落相比已有差异。由此可见, 互花米草入侵红树林对当地的大型底栖动物群落多样性造成影响。     

A biological trait approach to assess the functional composition of subtidal benthic communities in an estuarine ecosystem

Within transitional/estuarine environments ‘ecosystem functioning’ has been mostly investigated with “traditional” taxonomic analysis, based on the taxonomic composition of benthic invertebrate communities. However, ‘ecosystem functioning’ depends also greatly on the functional characteristics (biological traits) of organisms.It was a priori suggested that the biological traits of the subtidal benthic invertebrate communities within an estuarine environment would respond to the high variability of environmental pressures (natural and human induced) within this type of ecosystem.For this study, traditional taxonomic analysis (species richness, species density and Shannon–Wiener diversity) as well as biological trait analysis were used together for the first time to investigate the response of the subtidal benthic invertebrate communities to the environmental pressures within the Mondego estuary (Portugal).Biological trait analysis, in addition to traditional taxonomic analysis provided a more comprehensive understanding of the functioning within this type of ecosystem. Some of the most important outcomes are: (i) the trait “salinity preference” was the most important trait that distributed the species along the estuary, (ii) the central part of the estuary appeared to be under higher environmental stress levels than the other areas, as suggested by a dominance of some “opportunistic” traits (e.g. small short-lived species), (iii) the ratio between functional diversity (FD) and Shannon–Wiener diversity (H′) indicated lower functional redundancy at the upper reaches of the estuary. Our results, suggest that the ratio (FD/H′) might be a helpful tool to visualize this functional attribute and could potentially be applied to different communities from distinct environments. Using the traditional taxonomic analysis alone, this last functional aspect would not be detectable. Therefore, the inclusion of biological traits analysis is recommendable for estuarine ecological studies.     

Estuarine Typology and the Structuring of Fish Communities in South Africa

Synopsis Some 190 South African estuaries, covering all biogeographic provinces within the region, were classified into three types based on a combination of mouth condition and estuary size (surface area). The fish communities of the estuary types within each zoogeographic region were described and compared. Multivariate analyses revealed that each estuary type contained somewhat distinct fish communities. In addition, the study identified common patterns in species richness and ichthyofaunal composition. Open estuaries have relatively high species richness; this is a reflection of a permanent or near-permanent connection with the sea which allows access into these estuaries by all marine migrant species within the region. Intermittent connection with the sea limits the recruitment and utilisation of closed estuaries by marine migrant species; this results in reduced species richness in moderate to large closed estuaries. Small closed estuaries exhibit the lowest species richness and this is probably a result of their limited habitat and increased isolation from the sea. The key fishes that utilise estuaries could also be categorised into a number of groups based on their relative importance within each estuary type. Some species are largely restricted to predominantly open systems. Other taxa, while important in predominantly open estuaries, also occur in moderate to large closed systems. Some estuarine-associated species are well represented in all estuary types but exhibit a greater importance in closed estuaries. This study has shown that South African fish communities not only reflect estuarine typology but also respond to these differences in a consistent manner that spans all zoogeographic regions. The prevalence of similar patterns in other parts of the world suggests that estuarine typology is a major driver in the structuring of global estuarine fish communities.     

长江口中华鲟自然保护区潮间带鱼类群落结构

为深入了解鱼类对潮间带水域的利用,2010年5月、8月、11月在长江口中华鲟自然保护区潮间带水域进行了插网调查。结果表明:调查期间共出现28种鱼类,隶属于10目16科,鲤形目种类最多,其次为鲈形目;群落优势种为中国花鲈(Lateolabrax maculates)、鮻(Liza haematocheila)和窄体舌鳎(Cynoglossus gracilis);长江口中华鲟自然保护区潮间带鱼类群落可以分为河口定居鱼类、海洋偶见鱼类、降海洄游鱼类、溯河洄游鱼类、海洋洄游鱼类和淡水鱼类6种生态类群,其中河口定居鱼类和海洋洄游鱼类占据明显优势。对调查水域鱼类群落进行聚类分析,结果表明秋季和春夏季差异显著,鮻、中国花鲈、斑尾刺虾虎鱼(Acanthogobius ommaturus)是对季节差异贡献最大的3种鱼类。主成分分析结果表明,夏季鱼类群落主要受到海洋洄游鱼类的影响,而秋季主要受到河口定居鱼类的影响,这2种鱼类的幼鱼在不同季节利用潮间带水域索饵肥育可能是造成季节差异的主要原因。     

中国东部沿海中小型河流鱼类的整体遗传多样性评价——以曹娥江为例

研究将曹娥江作为东部沿海中小型河流代表, 基于线粒体细胞色素b基因(Cyt b)分子标记对其鱼类的整体遗传多样性水平进行了评估。结果表明, 21个种26个群体鱼类Cyt b基因的单倍型多样性指数(h)和核苷酸多样性指数(π)水平分别为0.074—0.987和0.00019—0.00520, 物种间遗传多样性水平差异较大; 比较不同江段鱼类遗传多样性水平发现, 曹娥江鱼类的单倍型多样性指数水平从河口到中下游再到上游逐渐降低(P<0.05)。比较同一物种的遗传多样性水平发现, 曹娥江鱼类的核苷酸多样性指数水平低于长江、珠江等大型河流鱼类的相应指数水平(P<0.05), 提示曹娥江鱼类的整体遗传多样性处于中等偏下水平, 鱼类资源亟需科学的保护和修复。进一步分析人为扰动因素对曹娥江鱼类遗传多样性水平的影响发现, 敏感型鱼类的单倍型多样性指数水平显著低于中等耐受型鱼类(P<0.05); 麦穗鱼(Pseudorasbora parva)、光泽黄颡鱼(Pelteobagrus nitidus)和刺鳅(Mastacembelus aculeatus)3种鱼类的上游镜岭群体单倍型多样性指数和核苷酸多样性指数水平均低于其中游仙岩群体的相应指数水平。结果提示, 水体污染、过度捕捞可能是造成目前曹娥江鱼类遗传多样性水平较低的主要原因。研究结果将为曹娥江乃至东部中小河流的鱼类资源的管理、保护和开发利用提供重要的理论依据。     

Small estuarine fishes feed on large trematode cercariae: lab and field investigations

In aquatic ecosystems, dense populations of snails can shed millions of digenean trematode cercariae every day. These short-lived, free-living larvae are rich in energy and present a potential resource for consumers. We investigated whether estuarine fishes eat cercariae shed by trematodes of the estuarine snail Cerithidea californica. In aquaria we presented cercariae from 10 native trematode species to 6 species of native estuarine fishes. Many of these fishes readily engorged on cercariae. To determine if fishes ate cercariae in the field, we collected the most common fish species, Fundulus parvipinnis (California killifish), from shallow water on rising tides when snails shed cercariae. Of 61 killifish, 3 had recognizable cercariae in their gut. Because cercariae are common in this estuary, they could be frequent sources of energy for small fishes. In turn, predation on cercariae by fishes (and other predators) could also reduce the transmission success of trematodes.     

Estuarine recruitment of a marine goby reconstructed with an isotopic clock

Information on movement patterns of marine fishes between estuarine populations and stocks at sea is fundamental to understanding their population dynamics, life history tactics and behavior. Furthermore, understanding estuarine habitat use by marine fishes is crucial for their effective conservation and integrated estuarine management. Although large numbers of young marine fish make use of temperate estuaries in highly predictable abundance patterns, very little is known about how estuarine populations interact with the populations at sea. Recruitment of sand goby Pomatoschistus minutus (Pallas, 1770) into the low salinity zone of the Scheldt estuary (Belgium) was reconstructed over an entire year by means of an isotopic clock. These results were combined with a growth model to yield age and length at immigration. Sand gobies entered the upper Scheldt estuary almost continuously from May onwards, except in July when they appeared to avoid the estuary due to warm summer temperatures. About 70% of the fish caught in the upper estuary resided there for less than 1 month, which indicates a strong temporal overlap of immigration and emigration. This complex migration pattern suggests that estuarine residence is caused by trade-offs made at the individual level, whereby migration is probably triggered by temperature. The high turnover of individuals in the estuarine population leads us to question the functional role of the estuary for marine fishes. Sand gobies entering the upper estuary had a wide range of ages and body sizes, although they were at least 2 months old and had a minimum standard length of approximately 20 mm. This study shows that the use of an isotopic clock strongly complements catch data and is useful to describe the connectivity between populations.     

Trophic behaviour of juvenile reef fishes inhabiting interlinked mangrove–seagrass habitats in offshore mangrove islets

Stable isotope (δ¹³C and δ¹⁵N) and gut content analyses were used to investigate size‐related feeding habits of four reef fishes (the beaugregory Stegastes leucostictus, the french grunt Haemulon flavolineatum, the schoolmaster snapper Lutjanus apodus and the yellowtail snapper Ocyurus chrysurus) inhabiting an offshore (non‐estuarine) mangrove islet off Belize, Central America. Comparisons of isotopic niche space and Schoener diet similarity index suggested a low to moderate degree of niche overlap between fish size groups. The δ¹³C gradient between mangrove and seagrass prey as well as results of Bayesian mixing models revealed that sampled fishes relied mostly on seagrass prey items. Only small and large juveniles of the carnivorous species L. apodus derived a part of their diet from mangroves by targeting mangrove‐associated Grapsidae crabs and fish prey, respectively. Isotopic niche shifts were particularly obvious for carnivorous fishes that ingested larger prey items (Xanthidae crabs and fishes) during their ontogeny. The utilization of mangrove food resources is less than expected and depends on the ecology and life history of the fish species considered. This research highlights that mangrove‐derived carbon contributed relatively little to the diets of four fish taxa from an offshore mangrove islet.     

Structural properties of two types of mangrove stands on the northwestern coast of Sri Lanka

Mangrove stands in Puttalam lagoon and Dutch bay, two interconnected lagoons situated on the northwestern coast of Sri Lanka have been classified broadly into two groups, i.e., estuarine and island/mainland-fringing stands. Structural diversity of six mangrove stands, representing the two types was studied in terms of floristic composition, density, basal area, mean stand diameter, tree height, standing above-ground biomass and leaf-area index.Rhizophora mucronata andAvicennia marina were the dominant species. Higher mean stand diameters for the mangrove stands in Puttalam lagoon indicated greater maturity than the estuarine mangrove stands in Dutch bay. Nevertheless, estuarine stands in Dutch bay were structurally more complex (complexity indices 8.11–22.7) than the island/mainland-fringing mangrove stands (complexity indices 1.38–6.78). Higher number of species present in the estuarine mangrove stands is the major element that contributes to the higher values for the complexity indices for those stands. This appears to mask the contribution of stand-age to the complexity of a mangrove stand. Therefore complexity indices alone may not be used to explain adequately the structural diversity among mangrove stands.     

The influence of freshwater flows on two estuarine resident fish species show differential sensitivity to the impacts of drought,flood and climate change

Estuaries are particularly susceptible to climate change and drought resulting in atypical changes to freshwater flows. How such changes in flow impact on the ecology of estuarine fishes may depend on how a species moves in response to changing flow conditions. Acoustic telemetry was used to interpret fine-scale movements of two co-inhabiting estuarine fish species, black bream, Acanthopagrus butcheri and estuary perch, Macquaria colonorum in relation to freshwater flows, season and moon phase. We found black bream to be highly mobile, regularly travelling the length of the estuary and into the neighbouring estuaries. In contrast, estuary perch had particular home ranges and made occasional, upstream or downstream movements. Possibly influenced by freshwater flows, estuary perch moved at greater rates in the Tambo compared to fish in the Mitchell. Black bream resided in the upper estuary during winter and spring and the lower estuary during summer and autumn, whereas estuary perch remained in the upper estuary throughout the year, with occasional downstream movements in winter and spring. This study revealed 1) significantly large increases in freshwater flows result in mass downstream movements in both species, 2) fish moved upstream during full moons and 3) there are contrasting spatio-temporal patterns in movement between species. The results from this study highlight that estuarine fishes are likely to show differential sensitivity to the impacts of drought and climate change and illustrate how acoustic telemetry methods can be used to determine the environmental needs of fishes and help efforts to conserve and manage estuaries worldwide.     

The fish zonation of the Itanhaém river basin in the Atlantic Forest of southeast Brazil

The distribution range of fishes along an upstream–downstream gradient within a river basin is determined by the ecological requirements of each fish species. This differential pattern of distribution may suggest the occurrence of fish zones, where different functional guilds would prevail. The earliest concept of fish zonation highlighted the preferential position of several species in European rivers. Nowadays, there is a consensus that for a broad application of this concept, it is necessary to consider the division in functional groups along the downstream profile as related to reproductive, feed and population dynamics traits. However, for a number of tropical systems, such information does not exist. In this case, it is possible to use the fish family as a surrogate metric, by assuming that it fully covers common aspects of morphology, feeding, and behavior. Using this surrogate metric, we analyzed the distribution range of fish species along an elevation gradient in a typical Atlantic Forest basin in southeast Brazil. Our objective was to delimit fish zones based on the representativeness of some dominant fish families. Between 2006 and 2008, we sampled 42 sites from the estuary to the headwater creeks in elevations that varied from 3 to 783 m. The data were explored using the species (or family) occurrence, relative numerical abundance (N′), relative biomass (B′), and the importance index (IP). We applied the non-metric multidimensional scaling (NMDS) to ordinate the sampling sites using the Jaccard distance calculated on the species occurrence matrix. Data on family importance were superimposed to the NMDS to check how the distribution and the abundance of the families were correlated to the ordination. We caught 64 species distributed among 25 fish families. Based on the dominance of some families, we propose that the fish assemblage in the Itanhaém river basin can be organized in four fish zones (FZ) and three transitory zones (TZ), which replace each other along the longitudinal gradient. The marine/estuarine fishes dominated in FZ1 and TZ1. The freshwater fishes were dominated by Characidae (FZ2), Heptapteridae (FZ3), and Gymnotidae (FZ4). TZ2 was equally dominated by Characidae, Loricariidae, and Heptapteridae. The distinct assemblage composition along the FZ’s may relate to complex interactions involving seasonal patterns of variation in salinity levels (next to estuary), slope, presence of downstream barriers, and availability of food resources. We expect that the patterns observed in our study will also be presented in other coastal Atlantic Forest basins in Southeast Brazil.     

Preliminary analysis of the fish species of the Pacific Central American Mangrove of Zancudo, Golfo Dulce, Costa Rica

The aim of the present paper is to provide first information on the mangrove fish community of the tropical fjord-like Golfo Dulce (GD), to study its importance for fish diversity and fisheries in the area and to give preliminary results on its spatial–temporal variation. Eighty-two species belonging to 30 families were identified. More than half of them belonged to the estuarine transient fish group and only 14 species were estuarine resident, highlighting the importance of the Zancudo mangrove as a transition area. The most diverse families were Sciaenidae, Carangidae and Haemulidae for both rainy and dry seasons. As much as 71% of the species captured were of first or second grade economic value and only 11% had no commercial value. Comparing our data with fisheries and scientific surveys inside and outside the gulf suggests the importance of the Zancudo mangrove for regional fisheries and fish diversity. Multidimensional scaling (MDS) indicated gradual changes in the fish community composition from the river mouth to the more internal sampling sites for rainy and dry seasons. Moreover, shifts in abundance and species composition between seasons were observed, mainly an increase in the differences between the boundaries and the central zones of the mangrove. These changes were attributed to the higher salinity differences between sites during the dry season forcing the occasional visitor fish downstream and freshwater fish taxa upstream. While the results contribute to initiatives for participative fisheries management in the region, further studies are needed to analyse the variations in detail.     

Opportunistic use of estuarine habitat by juvenile bull trout, <Emphasis Type="Italic">Salvelinus confluentus</Emphasis>, from the Elwha River before,during, and after dam removal

Estuaries are used by anadromous fishes, either as the definitive marine habitat or as transition habitat as they move to fully marine waters, and extent of estuary use may vary with habitat conditions and fish attributes. Bull trout (Salvelinus confluentus) are commonly fluvial or adfluvial, though anadromous populations also exist. However, little is known about estuary use, especially by juveniles of this threatened species. We sampled the estuaries of the Elwha River, where a spawning population exists, and the nearby Salt Creek, where none exists, to reveal seasonal timing of estuarine use by juvenile bull trout, size of those using the estuary, and possible use of the non-natal estuary. We captured juvenile bull trout (all ≥100 mm FL, most <300 mm) in the Elwha River estuary in all months except August, but primarily December through May. None was captured in Salt Creek’s estuary despite comparable sampling effort. We also evaluated how dam removal on the Elwha River influenced bull trout estuarine occupancy by sampling before, during, and after dam removal, because this process enlarged the estuary but also increased turbidity and sediment transport in the lower river. Catches were low before dam removal, increased during and immediately after removal, and returned to low levels in recent years, suggesting that juveniles temporarily sought refuge from conditions associated with dam removal. Our findings indicate juvenile bull trout occupy estuarine habitat opportunistically; this information may aid conservation efforts as anadromous populations occur elsewhere in rivers with estuaries altered by human development.     

Changes in rocky reef fish assemblages throughout an estuary with a restricted inlet

Rocky reef habitat is common in many estuaries, yet its role as a habitat for fishes is poorly understood. There is also limited understanding of how access of coastal species into estuaries and habitat quality can affect the distribution of rocky reef fishes within estuaries. This study used baited remote underwater video stations to determine spatial patterns in fish assemblages associated with rocky reef habitat throughout a barrier estuary with a permanently open but restricted inlet. Estuarine rocky reefs provided habitat for a diverse assemblage of fishes, many of which were large juveniles and subadults. In the absence of a pronounced salinity or temperature gradient, a clear transition in fish assemblages occurred from coastal waters, through the inlet channel, to the central estuary, and into the inner estuary. The inlet channel, notably its narrowness and length, limits tidal input into this estuary, which acts as a significant impediment to the dispersal of many coastal fishes, and insufficient habitat excludes many coastal rocky reef species from the inner estuary. This study highlights the need to recognise estuarine rocky reefs as providing habitat for diverse fish assemblages and the role inlets play in restricting access of coastal species.