Evaluating Differences in Harvest Data Used in the Sex-Age-Kill Deer Population Model

Abstract: A steady increase in archery hunting participation and frequent changes in hunter regulations led to an evaluation of harvest data used in a common white-tailed deer (Odocoileus virginianus) population model. Our goal was to determine if model parameters and population estimates traditionally estimated solely by firearm harvest data were biased with respect to altered sex and age ratios brought about by increases in archery hunting and harvest success. The sex-age-kill (SAK) model, commonly used by state agencies, was developed in the mid-1900s when deer numbers were low and firearm harvest was predominant. Management actions were concentrated on increasing deer numbers, and model assumptions relied heavily on a stable age distribution and a minimal antlerless deer harvest. We evaluated the reliance of SAK in a modern hunting scenario using a 10-year dataset obtained from Michigan, USA, that encompassed a variety of climatic regions, hunting seasons, and regulation scenarios. We found that firearm and archery harvest sex and age ratios differed among 5 geographic groups and study years for males, females, and fawns (P<0.001, P = 0.001, and P = 0.037, respectively). Also, the addition of archery harvest data increased population estimates but did not alter overall trends. We recommend that managers reassess harvest-based population estimates in 2 situations: 1) if regulation changes affect antlerless deer harvest, and 2) when trends in hunter success rates cause fluctuations in harvest data.     

Incorporating harvest rates into the sex-age-kill model for white-tailed deer

Although monitoring population trends is an essential component of game species management, wildlife managers rarely have complete counts of abundance. Often, they rely on population models to monitor population trends. As imperfect representations of real-world populations, models must be rigorously evaluated to be applied appropriately. Previous research has evaluated population models for white-tailed deer (Odocoileus virginianus); however, the precision and reliability of these models when tested against empirical measures of variability and bias largely is untested. We were able to statistically evaluate the Pennsylvania sex-age-kill (PASAK) population model using realistic error measured using data from 1,131 radiocollared white-tailed deer in Pennsylvania from 2002 to 2008. We used these data and harvest data (number killed, age-sex structure, etc.) to estimate precision of abundance estimates, identify the most efficient harvest data collection with respect to precision of parameter estimates, and evaluate PASAK model robustness to violation of assumptions. Median coefficient of variation (CV) estimates by Wildlife Management Unit, 13.2% in the most recent year, were slightly above benchmarks recommended for managing game species populations. Doubling reporting rates by hunters or doubling the number of deer checked by personnel in the field reduced median CVs to recommended levels. The PASAK model was robust to errors in estimates for adult male harvest rates but was sensitive to errors in subadult male harvest rates, especially in populations with lower harvest rates. In particular, an error in subadult (1.5-yr-old) male harvest rates resulted in the opposite error in subadult male, adult female, and juvenile population estimates. Also, evidence of a greater harvest probability for subadult female deer when compared with adult (≥2.5-yr-old) female deer resulted in a 9.5% underestimate of the population using the PASAK model. Because obtaining appropriate sample sizes, by management unit, to estimate harvest rate parameters each year may be too expensive, assumptions of constant annual harvest rates may be necessary. However, if changes in harvest regulations or hunter behavior influence subadult male harvest rates, the PASAK model could provide an unreliable index to population changes. © 2012 The Wildlife Society.     

Estimating red deer abundance in a wide range of management situations in Mediterranean habitats

When human interventions interfere with the natural regulation of wildlife populations by favouring some species, overabundance can emerge. We evaluated different methods of estimating red deer abundance in a wide range of population densities from southern Spain. Distance sampling estimates were used as the reference method across 22 localities and were compared with two kilometric abundance indices (KAIs), four indices based on pellet group counts and two browsing indices (BWIs). The average red deer density estimated by distance sampling was 19.51±3.19 deer per 100 ha, showing a wide range across the study area (0.04–66.77). Distance sampling estimates correlated with the KAIs, pellet group-based index and the BWI. The agreement with distance sampling improved when groups were used instead of individuals in the KAIs, when the minimum pellet group size was fixed at 20 pellets in the dropping counts, and when only highly palatable species were used in the BWI. Thus, several direct and indirect methods can estimate red deer abundance in Mediterranean habitats from Southern Spain with appropriate modifications.     

White-Tailed Deer Population Dynamics Following Louisiana Black Bear Recovery

Changing predator communities have been implicated in reduced survival of white-tailed deer (Odocoileus virginianus) fawns. Few studies, however, have used field-based age-specific estimates for survival and fecundity to assess the relative importance of low fawn survival on population growth and harvest potential. We studied white-tailed deer population dynamics on Tensas River National Wildlife Refuge (TRNWR) in Louisiana, USA, where the predator community included bobcats (Lynx rufus), coyotes (Canis latrans), and a restored population of Louisiana black bear (Ursus americanus luteolus). During 2013–2015, we radio-collared and monitored 70 adult (≥2.5 yrs) and 21 yearling (1.5-yr-old) female deer. Annual survival averaged 0.815 (95% CI = 0.734–0.904) for adults and 0.857 (95% CI = 0.720–1.00) for yearlings. We combined these estimates with concurrently collected fawn survival estimates (0.27; 95% CI = 0.185–0.398) to model population trajectories and elasticities. We used estimates of nonhunting survival (annual survival estimated excluding harvest mortality) to project population growth (λ) relative to 4 levels of harvest (0, 10%, 20%, 30%). Finally, we investigated effects of reduced fawn survival on population growth under current management and with elimination of female harvest. Despite substantial fawn predation, the deer population on TRNWR was increasing (λ = 1.06) and could sustain additional female harvest; however, the population was expected to decline at 20% (λ = 0.98) and 30% (λ = 0.94) female harvest. With no female harvest, the population was projected to increase with observed (λ = 1.15) and reduced fawn survival (λ = 1.02), but the population could not sustain current female harvest (10%) if fawn survival declined (λ = 0.90). For all scenarios, adult female survival was the most elastic parameter. Given the importance of adult female survival, the relative predictability in response of adult survival to harvest management, and the difficulty in altering fawn survival, reducing female harvest is likely the most efficient approach to compensate for low fawn survival. On highly productive sites such as ours, reduction, but not necessarily elimination, of harvest can mitigate effects of low fawn survival on population growth. © 2020 The Wildlife Society.     

Evaluation of Accuracy and Precision of Downing Population Reconstruction

ABSTRACT Downing population reconstruction uses harvest-by-age data and backward addition of cohorts to estimate minimum population size over time. Although this technique is currently being used for management of black bear (Ursus americanus) and white-tailed deer (Odocoileus virginianus) populations, it had not undergone a rigorous evaluation of accuracy. We used computer simulations to evaluate the impacts of collapsing age classes and violating the assumptions of this technique on population reconstruction estimates and trends. Changes in harvest rate or survival over time affected accuracy of reconstructed population estimates and trends. The technique was quite robust to collapsing age classes as far as 3+ for bears and deer. This method would be suitable for estimating population growth rate (λ) for populations experiencing no trend in harvest rate or natural mortality rate over time. Our evaluation showed Downing population reconstruction to be a potentially valuable tool for managing harvested species with high harvest rates and low natural mortality, with possible application to black bear and white-tailed deer populations.     

Spatio-temporal variation in male white-tailed deer harvest rates in Pennsylvania: Implications for estimating abundance

The performance of 2 popular methods that use age-at-harvest data to estimate abundance of white-tailed deer is contingent on assumptions about variation in estimates of subadult (1.5 yr old) and adult (≥2.5 yr old) male harvest rates. Auxiliary data (e.g., estimates of survival or harvest rates from radiocollared animals) can be used to relax some assumptions, but unless these population parameters exhibit limited temporal or spatial variation, these auxiliary data may not improve accuracy. Unfortunately maintaining sufficient sample sizes of radiocollared deer for parameter estimation in every wildlife management unit (WMU) is not feasible for most state agencies. We monitored the fates of 397 subadult and 225 adult male white-tailed deer across 4 WMUs from 2002 to 2008 using radio telemetry. We investigated spatial and temporal variation in harvest rates and investigated covariates related to the patterns observed. We found that most variation in harvest rates was explained spatially and that adult harvest rates (0.36–0.69) were more variable among study areas than subadult harvest rates (0.26–0.42). We found that hunter effort during the archery and firearms season best explained variation in harvest rates of adult males among WMUs, whereas hunter effort during only the firearms season best explained harvest rates for subadult males. From a population estimation perspective, it is advantageous that most variation was spatial and explained by a readily obtained covariate (hunter effort). However, harvest rates may vary if hunting regulations or hunter behavior change, requiring additional field studies to obtain accurate estimates of harvest rates. © 2011 The Wildlife Society.     

Noninvasive Hair Sampling and Genetic Tagging of Co-Distributed Fishers and American Martens

ABSTRACT Estimation of abundance is important for assessing population responses to management actions. Accurate abundance estimates are particularly critical for monitoring temporal variation following reintroductions when the management goal is to attain population sizes capable of sustaining harvest. Numerous reintroductions have taken place in the Great Lakes region of North America, including efforts to restore extirpated fishers (Martes pennanti) and American martens (M. americana). We used a DNA-based noninvasive hair-snaring method based on one trap design and trapping -grid configuration, and evaluated capture—mark—recapture (CMR) analytical approaches to simultaneously estimate population size for co-distributed fishers and American martens in a 671-km² area of the Ottawa National Forest in the western Upper Peninsula of Michigan, USA. We included harvest as a final recapture period to increase probability of recapture and to evaluate potential violations of geographic closure assumptions. We used microsatellite markers to identify target species, eliminate congener species, and provide individual identity for estimation of abundance. Population estimates for fishers and martens on the study area ranged from 35 to 60 and 8 to 28, respectively. Estimators incorporating harvest data resulted in up to a 40% increase in abundance estimates relative to estimators without harvest. We considered population estimates not including harvest data the most appropriate for the study due to timing of sampling and environmental factors, but inclusion of harvested individuals was shown to be useful as a means to detect violations of the assumption of geographic closure. We suggest improvements on future CMR sampling designs for larger landscape scales of relevance to management through incorporation of habitat or historical harvest data. Noninvasive genetic methods that simultaneously estimate the numerical abundance of co-distributed species can greatly decrease assessment costs relative to traditional methods, and increase resulting demographic and ecological information.     

Methodology matters when estimating deer abundance: a global systematic review and recommendations for improvements

Deer (Cervidae) are key components of many ecosystems and estimating deer abundance or density is important to understanding these roles. Many field methods have been used to estimate deer abundance and density, but the factors determining where, when, and why a method was used, and its usefulness, have not been investigated. We systematically reviewed journal articles published during 2004–2018 to evaluate spatio-temporal trends in study objectives, methodologies, and deer abundance and density estimates, and determine how they varied with biophysical and anthropogenic attributes. We also reviewed the precision and bias of deer abundance estimation methods. We found 3,870 deer abundance and density estimates. Most estimates (58%) were for white-tailed deer (Odocoileus virginianus), red deer (Cervus elaphus), and roe deer (Capreolus capreolus). The 6 key methods used to estimate abundance and density were pedestrian sign (track or fecal) counts, pedestrian direct counts, vehicular direct counts, aerial direct counts, motion-sensitive cameras, and harvest data. There were regional differences in the use of these methods, but a general pattern was a temporal shift from using harvest data, pedestrian direct counts, and aerial direct counts to using pedestrian sign counts and motion-sensitive cameras. Only 32% of estimates were accompanied by a measure of precision. The most precise estimates were from vehicular spotlight counts and from capture–recapture analysis of images from motion-sensitive cameras. For aerial direct counts, capture–recapture methods provided the most precise estimates. Bias was robustly assessed in only 16 studies. Most abundance estimates were negatively biased, but capture–recapture methods were the least biased. The usefulness of deer abundance and density estimates would be substantially improved by 1) reporting key methodological details, 2) robustly assessing bias, 3) reporting the precision of estimates, 4) using methods that increase and estimate detection probability, and 5) staying up to date on new methods. The automation of image analysis using machine learning should increase the accuracy and precision of abundance estimates from direct aerial counts (visible and thermal infrared, including from unmanned aerial vehicles [drones]) and motion-sensitive cameras, and substantially reduce the time and cost burdens of manual image analysis.     

Application of photographic capture–recapture modelling to estimate demographic parameters for male Asian elephants

In addition to the threats of habitat loss and degradation, adult males of the Asian elephant Elephas maximus also face greater threats from ivory poaching and conflict with humans. To understand the impact of these threats, conservationists need robust estimates of abundance and vital rates specifically for the adult male segment of elephant populations. By integrating the identification of individual male elephants in a population from distinct morphology and natural markings, with modern capture–recapture (CR) sampling designs, it is possible to estimate various demographic parameters that are otherwise difficult to obtain from this long-lived and wide-ranging megaherbivore. In this study, we developed systematic individual identification protocols and integrated them into CR sampling designs to obtain capture histories and thereby estimate the abundance of adult bull elephants in a globally important population in southern India. We validated these estimates against those obtained from an independent method combining line-transect density estimates with age–sex composition data for elephants. The sampled population was open to gains and losses between sampling occasions. The abundance of adult males in the 176 km² study area was (SÊ ) = 134(14.20) and they comprised 14% (±1%) of the total elephant population. Time-specific abundance estimates for each sampling occasion showed a distinct increase in adult male numbers over the sampling period, explained by seasonal patterns of local migration. CR-based estimates for adult male abundance closely matched estimates from distance-based methods. Thus, while providing abundance data of comparable rigour and precision, photographic CR methods permit estimation of demographic parameters for the Asian elephant that are both urgently needed and difficult to obtain.     

冬末春初圈养梅花鹿健康与腹泻个体粪便菌群的比较分析

腹泻是制约梅花鹿(Cervus nippon)养殖发展的主要因素之一，通常与肠道菌群失衡有关，而健康与腹泻梅花鹿个体菌群组成变化尚不清楚。为探究健康与腹泻梅花鹿肠道菌群差异，分析梅花鹿腹泻原因，以圈养雄性梅花鹿为实验对象，采集正常及腹泻梅花鹿粪便共18份，通过16S rRNA基因测序进行比较分析。研究结果表明，腹泻组菌群丰度及多样性较健康组均有所下降。在门至属水平，腹泻组理研菌科(Rikenellaceae)、克里斯滕森菌科(Christensenellaceae)等有益菌丰度下降，Treponema＿2菌属等促炎菌丰度上升。此外，瘤胃球菌科UCG-014菌属(Ruminococcaceae＿UCG-014)和理研菌科RC9菌属(Rikenellaceae＿RC9＿gut＿group)在健康组中显著富集；疣微菌门(Verrucomicrobia)、拟普雷沃氏菌属(Alloprevotella)、阿克曼氏菌属(Akkermansia)在腹泻组显著富集。腹泻梅花鹿与健康梅花鹿粪便菌群组成和多样性存在显著差异，疣微菌门丰度升高可能是导致梅花鹿腹泻的一个原因。     

Predation has a greater impact in less productive environments: variation in roe deer, Capreolus capreolus, population density across Europe

Aim We aimed to describe the large‐scale patterns in population density of roe deer Caprelous capreolus in Europe and to determine the factors shaping variation in their abundance. Location Europe. Methods We collated data on roe deer population density from 72 localities spanning 25° latitude and 48° longitude and analysed them in relation to a range of environmental factors: vegetation productivity (approximated by the fraction of photosynthetically active radiation) and forest cover as proxies for food supply, winter severity, summer drought and presence or absence of large predators (wolf, Canis lupus, and Eurasian lynx, Lynx lynx), hunter harvest and a competitor (red deer, Cervus elaphus). Results Roe deer abundance increased with the overall productivity of vegetation cover and with lower forest cover (sparser forest cover means that a higher proportion of overall plant productivity is allocated to ground vegetation and thus is available to roe deer). The effect of large predators was relatively weak in highly productive environments and in regions with mild climate, but increased markedly in regions with low vegetation productivity and harsh winters. Other potentially limiting factors (hunting, summer drought and competition with red deer) had no significant impact on roe deer abundance. Main conclusions The analyses revealed the combined effect of bottom‐up and top‐down control on roe deer: on a biogeographical scale, population abundance of roe deer has been shaped by food‐related factors and large predators, with additive effects of the two species of predators. The results have implications for management of roe deer populations in Europe. First, an increase in roe deer abundance can be expected as environmental productivity increases due to climate change. Secondly, recovery plans for large carnivores should take environmental productivity and winter severity into account when predicting their impact on prey.     

Using spotlight observations to predict resource selection and abundance for white-tailed deer

Spotlight surveys for white-tailed deer (Odocoileus virginianus) can yield large presence-only datasets applicable to a variety of resource selection modeling procedures. By understanding how populations distribute according to a given resource for a reference area, density and abundance can be predicted across new areas assuming the relationship between habitat quality (measured by an index of selection) and species distribution are equivalent. Habitat-based density estimators have been applied to wildlife species and are useful for addressing conservation and management concerns. Although achieving reliable population estimates is a primary goal for spotlighting studies, presence-only models have yet to be applied to spotlight data for estimating habitat selection and abundance for deer. From 2012 to 2017, we conducted spring spotlight surveys in each of 99 counties in Iowa, USA, and collected spatial locations for 20,149 groups of deer (n = 71,323 individuals). We used a resource selection function (RSF) based on deer locations to predict the relative probability of use for deer at the population level and to estimate statewide abundance. The number of deer observed statewide increased significantly with increasing RSF value for all years and the mean RSF value along survey transects explained 59% of the variability in county-level deer counts, indicating that a functional response between habitat quality and deer distribution existed at landscape scales. We applied our RSF to a habitat-based density estimator (extrapolation) and zero-inflated Poisson (ZIP) and negative binomial (ZINB) count models to predict statewide abundance from spotlight counts. Population estimates for 2012 were variable, indicating that atypical weather conditions may affect spotlight counts and population estimates in some years. For 2013–2017, we predicted a mean population of 439,129 (95% CI ∼ ± 55,926), 440,360 (∼ ± 43,676), and 465,959 (∼ ± 51,242) deer across years for extrapolation, ZIP, and ZINB models, respectively. Estimates from all models were not significantly different than estimates from an existing deer population accounting model in Iowa for 2013 and 2016, and differed by <76,000 deer for all models from 2013–2017. Extrapolation and ZIP models performed similarly and differed by <2,897 deer across all years, whereas ZINB models showed inconsistencies in model convergence and precision of estimates. Our results indicate that presence-only models are capable of producing reliable and precise estimates of resource selection and abundance for deer at broad landscape scales in Iowa and provide a tool for estimating deer abundance in a spatially explicit manner. © 2019 The Wildlife Society.     

Culling Versus Density Effects in Management of a Deer Population

Abstract: Wildlife managers often manipulate hunting regulations to control deer populations. However, few empirical studies have examined the level of hunting effort (hunter-days) required to limit population growth and demographic effects through harvesting of females. Moreover, the relative importance of density effects on population growth has not been quantified. We reconstructed a sika deer [Cervus nippon] population over a period of 12 years (1990–2001) using age- and sex-specific harvest data. Using cohort analysis, we analyzed population dynamics, focusing on 1) the relationship between hunting effort and hunting-induced mortality rate, 2) relative contributions of hunting mortality and recruitment of yearlings to annual changes in population growth rate, and 3) annual variation in recruitment rate. Population size increased until 1998 and declined thereafter. The population growth rate changed more in response to annual changes in recruitment rate than hunting mortality rate. Temporal variation in recruitment rate was not controlled by birth rate alone; direct density dependence, intensities of hunting mortality for fawns, and for females (≥2 yr of age), which accounted for the fawn survival rate, were required as factors to explain temporal variation. Density effects on the recruitment rate were not strong enough to regulate the population within the study period; high hunting mortality, with intensive female harvesting, was necessary to prevent population growth. Hunting effort was a good predictor of the hunting mortality rate, and female harvest had a negative effect on the recruitment rate through fawn survival. We suggest that >3,500 hunter-days and prioritization of female harvesting are required to prevent increases in this deer population.     

Is hunting an effective tool to control overabundant deer? A test using an experimental approach

Overabundant populations of cervids have induced drastic negative effects on plant communities in several regions worldwide. Antlerless deer harvest by sport hunters has been proposed as a potential solution to overabundance because the philopatric behavior of female deer is expected to limit recolonization of hunted zones. The efficiency of this method, however, has rarely been tested in the wild. Using a large-scale experimental design, we reduced white-tailed deer (Odocoileus virginianus) density within 5 20-km² areas on Anticosti Island (Québec, Canada). Our objective was to harvest 50% of antlerless deer in each site during the first year of the study in 2002, and 30% from 2003 to 2006. We monitored deer density, vegetation abundance and growth as well as deer life-history traits during 6 years in these experimental sites and in 5 control sites where harvest rate was 5–7%. Overall, we achieved 93% of harvest objectives. Contrary to our expectations, however, deer density, vegetation abundance and growth, and deer life-history traits did not vary differently in experimental and control sites during the study period. They rather varied stochastically but synchronously. We discuss several alternative hypotheses that may explain these results, including 1) compensatory mechanisms, 2) biases in density estimates, 3) limited access to territory for hunters, 4) large target areas for localized management, 5) low hunter density, 6) recolonization by surrounding deer, 7) slow plant response under canopy cover, and 8) bottom-up mechanisms. Given the large efforts invested in this study, we conclude that the local control of abundant cervid populations through sport hunting may be difficult to achieve in many natural environments. © 2012 The Wildlife Society.     

Detection Probability and Sources of Variation in White-Tailed Deer Spotlight Surveys

Abstract: As a first step in understanding structure and dynamics of white-tailed deer (Odocoileus virginianus) populations, managers require knowledge of population size. Spotlight counts are widely used to index deer abundance; however, detection probabilities using spotlights have not been formally estimated. Using a closed mark—recapture design, we explored the efficiency of spotlights for detecting deer by operating thermal imagers and spotlights simultaneously. Spotlights detected only 50.6% of the deer detected by thermal imagers. Relative to the thermal imager, spotlights failed to detect 44.2% of deer groups (≥1 deer). Detection probabilities for spotlight observers varied between and within observers, ranging from 0.30 (SE = 0.053) to 0.66 (SE = 0.058). Managers commonly assume that although road counts based on convenience sampling designs are imperfect, observers can gather population-trend information from repeated counts along the same survey route. Our results indicate detection rate varied between and within observers and surveyed transects. If detection probabilities are substantially affected by many variables, and if transect selection is not based on appropriate sampling designs, it may be impractical to correct road spotlight counts for detection probabilities to garner unbiased estimates of population size.     

Calibrating Statistical Population Reconstruction Models Using Catch-Effort and Index Data

Abstract: This paper illustrates how age-at-harvest data, when combined with hunter-effort information routinely collected by state game management agencies, can be used to estimate and monitor trends in big game abundance. Twenty-four years of age-at-harvest data for black-tailed deer (Odocoileus hemionus) were analyzed to produce abundance estimates ranging from 1,281 adult females to 3,232 adult females on a 22,079-ha tree farm in Pierce County, Washington, USA. The annual natural survival probability was estimated to be 0.7293 ( = 0.0097) for this female population. The estimated abundance was highly correlated with an independent browse damage index (r = 0.8131, P < 0.001). A population reconstruction incorporating the browse index did not substantially improve the model fit but did provide an auxiliary model for predicting deer abundance. This population reconstruction illustrates a cost-effective alternative to expensive big game survey methods.     

Comparison of occupancy modeling and radiotelemetry to estimate ungulate population dynamics

Radiotelemetry and unmarked occupancy modeling have been used to estimate animal population growth, but have not been compared for ungulates. We compared white-tailed deer (Odocoileus virginianus) population growth estimates from radiomarked individuals and occupancy modeling of unmarked individuals and evaluated advantages and disadvantages of each method. Estimates of population growth were obtained using remote camera (N = 54/year) detection/non-detection occupancy surveys of unmarked deer and from survival and recruitment data of radiomarked adult females (N = 87) and neonate fawns (N = 127) in a predominantly forested region of the Upper Peninsula of Michigan, USA, 2009–2011. We hypothesized that occupancy models and radiotelemetry data would have similar population growth trends because both methods sampled the same temporally closed population. Percent changes in camera trap data generally reflected finite population growth (λ) of radiomarked deer which increased (λ = 1.10 ± 0.01) from 2009 to 2010, but decreased (λ = 0.87 ± 0.02) from 2010 to 2011. Also, unmarked adult female abundance and fawn:adult female ratios generally reflected trends in radiomarked deer survival and recruitment. Royle–Nichols occupancy model abundance estimates had wide confidence intervals, which may preclude using this method from accurately estimating deer population growth. Radiotelemetry provided more precise population growth estimates, while allowing collection of vital rates and location data. However, the Royle–Nichols occupancy model may be preferred to radiotelemetry because it reflected yearly variation in population growth with reduced labor and no invasive marking. Researchers should consider the objectives and logistics of their study when choosing a specific method.     

圈养条件下新疆马鹿两个亚种的肠道菌群比较分析

肠道菌群组成复杂，与宿主肠道内环境动态平衡和健康息息相关。马鹿是鹿科动物中分布最广的种类，亚种分化众多，但现有马鹿肠道菌群研究较少。为丰富马鹿肠道菌群数据，以马鹿的两个亚种为阶元，运用高通量16S rRNA基因测序技术检测了7头雄性天山马鹿和7头雄性塔里木马鹿的肠道微生物，对其核心菌群、结构组成、多样性及肠道微生物的差异进行分析，旨在了解不同马鹿亚种肠道微生物组成差异，为两亚种间肠道菌群的差异提供参考。研究结果表明，塔里木马鹿菌群多样性及丰度低于天山马鹿。厚壁菌门（Firmicutes）、放线菌门（Actinobacteria）、变形菌门（Proteobacteria）及拟杆菌门（Bacteroidetes）为两组马鹿的优势菌门。此外，天山马鹿肠道中分解蛋白质、脂质的拟杆菌门和变形菌门相对丰度高于塔里木马鹿，而分解植物纤维的双歧杆菌（Bifidobacterium）、瘤胃球菌科UCG 014（Ruminococcaceae UCG 014）的相对丰度低于塔里木马鹿。本研究对天山马鹿及塔里木马鹿肠道菌群组成进行初步了解，可根据研究结果调整其饲料配比，为马鹿饲养管理的改善提供参考。     

Survival and Cause-Specific Mortality of Mature Male White-Tailed Deer

ABSTRACT Understanding sources of male deer mortality is a prerequisite to a successful management program, especially in Texas, USA, where white-tailed deer (Odocoileus virginianus) are the most economically important game species. South Texas, USA, is one of the few areas where males reach older age classes (> 4.5 yr), in part because of intense population management. Therefore, we obtained survival rates and causes of mortality of 48 mature male deer in south Texas, USA, over 2 years. We calculated Kaplan—Meier survival estimates during 2 study years modified for a staggered-entry design and annual survival rates for one cohort of deer from 1998 to 2004 using recapture and radiotelemetry data. We documented 21 mortalities (16 harvest and 5 nonhunting mortalities). Average annual survival of the known-aged 1998 cohort was 82% with 52% of surviving to 6.5 years of age. Survival in study year 2 (0.497 ± 0.069) was less than in study year 1 (0.781 ± 0.073; P = 0.0047), largely because males had finally reached harvestable age (> 6.5 yr old). All but one non-harvest mortality occurred during the rut or postrut periods. It appears that a large percentage of males can reach mature age classes under intense population management, making them available for harvest when at peak antler size. This allows for increased economic returns on intensively managed white-tailed deer populations.