Repeatability and heritability of divergent recombination frequencies in the Iowa Stiff Stalk Synthetic (Zea mays L.)

Variability in recombination frequency was reported in the Iowa Stiff Stalk Synthetic. The objectives of the present research were to verify the differences in recombination frequency among individuals in the Iowa Stiff Stalk Synthetic maize population and to determine if the recombination frequency differences persisted among the S₁ progeny. Testcrosses to measure male recombination frequency on three chromosomes (4, su1-c2; 5, a2-bt1-pr1; 9, sh1-bz1-wx1) were repeated for eight S₀ individuals. Recombination frequencies were repeatably divergent among those individuals which were selected based on high or low recombination frequencies on specific chromosomes. Individuals which had been selected for long and short total map distances across the three chromosome regions produced repeatably divergent recombination frequencies only at the su1-c2 region. The recombination frequencies of the S₁ lines, derived from the S₀ individuals which had the most divergent recombination frequencies on a single chromosome, were significantly different. The broadsense heritability estimates derived from the regression of six S₁ lines on six S₀ individuals ranged from 0.69 to 0.20 for the five chromosome regions. We conclude that genetic differences for recombination frequency exist in this population and that modification by selection should be possible.     

Feeding ecology of juvenile turbot Scophthalmus maximus and flounder Pleuronectes flesus at Gotland, Central Baltic Sea

Food and feeding of juvenile turbot Scophthalmus maximus and flounder Pleuronectes flesus were studied in five nursery areas at Gotland, Central Baltic Sea, ICES SD 27 and SD 28. Ontogeny involved partitioning of available food resources. The food choice of turbot <30 mm standard length (L_S) included both planktonic‐hyperbenthic prey (calanoid copepods and mysids) and epibenthic–endobenthic prey (chironomids and amphipods), whereas turbot ≥30 mm L_S fed mainly on hyperbenthic species (mysids and fishes). Conversely, for flounder, epibenthic–endobenthic prey were the most abundant prey items throughout development (harpactocoid copepods, oligochaetes and chironomids for fish <40 mm L_S and oligochaetes, chironomids and amphipods for flounder ≥40 mm L_S). Thus, the highest degree of dietary overlap occurred between turbot <30 mm and flounder ≥40 mm. Food composition for both turbot and flounder varied, however, according to exposure and predominant wind direction in the nursery area. For example, expressed as the ratio between the biomass of mysids and fishes consumed, the relative importance of mysids v. fishes as food source for turbot, varied from <1 in the most sheltered area to 16 and 27 in the more open areas. Considerable differences in feeding incidence were recorded; mean ±s .d . 58 ± 20% for turbot <30 mm L_S and 83 ± 8% for turbot ≥30 mm L_S, as opposed to ≥85–90% for flounder irrespective of size. The lower feeding success of turbot <30 mm L_S was related to mysid abundance, shown to vary spatially and temporally, and to density of flounder, indicating that food availability, and potentially interspecific competition, influence feeding of early juvenile turbot with implications for survival following settlement. Regarding variability in abundance, hyperbenthic prey, as mysids, are considered more variable than epi‐ and endobenthic organisms. Hence, in addition to the ‘nursery size hypothesis’, i.e. the positive relationship between abundance of recruits and extension of nursery areas, variability in food availability may explain the average lower recruitment of turbot as compared to other flatfishes, e.g. flounder.     

Book review

Microbial Geochemistry, W. E. Krumbein (ed.). Blackwell Scientific Publications, Inc., Palo Alto, California, 1983. 336 pp. $60.00     

Cis-diastereoselectivity in pictet-spengler reactions of L-tryptophan and electronic circular dichroism studies

The diastereoselective synthesis of optically active 1,3‐disubstituted tetrahydro‐β‐carbolines using polar protic Pictet–Spengler cyclization of (S)‐tryptophan methyl ester with five aldehydes RCHO (R═CH₃, C₂H₅, C₃H₇, C₄H₉, and C₆H₅) was studied. As an alternate route, the cyclization of (S)‐tryptophan with the same aldehydes and subsequent methylation of the resulting tetrahydro‐β‐carboline carboxylic acids were also performed for comparison. ¹³C NMR and electronic circular dichroism (ECD) studies and time‐dependent density functional theory ECD calculations data established the relative 1,3 cis/trans and the absolute configuration (1S,3S/ 1R,3S) of the synthesized compounds. The solid‐state and solution ECD study of the prepared compounds, supported by ECD calculation and X‐ray data, afforded a reliable ECD method for the configurational assignment of 1,3‐disubstituted tetrahydro‐β‐carbolines and revealed the stereochemical factors that determine the characteristic ECD data. Chirality 24:789–795, 2012. © 2012 Wiley Periodicals, Inc.     

Absolute stereochemistry of methanopterin and 5,6,7,8-tetrahydromethanopterin

The configuration at the C-9 of methanopterin (MPT) has been determined by comparing the circular dichroism (CD) spectra of MPT and its hydrolytic fragment, 1-[4-[[1-(2-amino-7-methyl-4-hydroxy-6-pteridinyl)-ethyl]amino]phenyl]-1-deoxy-D -ribitol (HP-1), with the CD spectra of a series of model compounds of known stereochemistry. These compounds included (S)-6-[1-(4-carboxymethylanilino)ethyl]pterin, (S-6(1-hydroxyethyl)-7-methylpterin, (S-6-(1-hydroxyethyl)pterin, (R)-6-(1-phenoxyethyl)pterin, D (+)-neopterin, and L -biopterin. From this comparison it was concluded that MPT has the R configuration at C-9 and is thus configurationally related to D (+)-neopterin, which has the S configuration at C-1. From previous work establishing the relative stereochemistry at C-6, C-7, and C-9 of N⁵-N¹⁰-methenyl-5,6,7,8-tetrahydromethanopterin (N⁵-N¹⁰-methenyl-H₄MPT) as R, S, and R, respectively, it is clear that the remaining asymmetric carbons at C-6 and C-7 of H₄MPT have the S and S configuration, respectively. Comparison of these latter two positions to the equivalent carbons in 5,6,7,8-tetrahydrofolate (H₄folate) show that the steps involved in the biological reduction of MPT to H₄MPT occur with the same stereochemical outcome as those involved in the biological reduction of folate to H₄folate. © 1996 Wiley-Liss, Inc.     

Genetic variance and drift in selfed and intermated populations derived from backcrossing

Summary The genetic variance among random-mated lines derived from backcrossing (BC_gS₁ lines) depends upon the backcross generation (g) and the number (n) of BC_gF₁ plants crossed in generations 1 through g. There is little effect of n on genetic variance for n > 6. The genetic variance among BC_gF₂-derived lines is greater than that among BC_gS₁ lines for all g. If either BC_gF₂-derived or BC_gS₁ lines are used as a base population for recurrent selection, 8, 16, 32, and 64 BC₁F₁, BC₂F₁, BC₃F₁, and BC₄F₁ plants, respectively, should be used to avoid loss of donor alleles to drift.Joint contribution of USDA-ARS and Journal Paper No. J-11224 of the Iowa Agriculture and Home Economics Experiment Station, Ames, Iowa. Project No. 2471Formerly Research Geneticist, USDA-ARS, Ames, Iowa, USA     

Respiratory carbon use and carbon storage in mid‐rotation loblolly pine (Pinus taeda L.) plantations: the effect of site resources on the stand carbon balance

We used estimates of autotrophic respiration (R_A), net primary productivity (NPP) and soil CO₂ evolution (S_ff), to develop component carbon budgets for 12‐year‐old loblolly pine plantations during the fifth year of a fertilization and irrigation experiment. Annual carbon use in R_A was 7.5, 9.0, 15.0, and 15.1 Mg C ha^?1 in control (C), irrigated (I), fertilized (F) and irrigated and fertilized (IF) treatments, respectively. Foliage, fine root and perennial woody tissue (stem, branch, coarse and taproot) respiration accounted for, respectively, 37%, 24%, and 39% of R_A in C and I treatments and 38%, 12% and 50% of R_A in F and IF treatments. Annual gross primary production (GPP=NPP+R_A) ranged from 13.1 to 26.6 Mg C ha^?1. The I, F, and IF treatments resulted in a 21, 94, and 103% increase in GPP, respectively, compared to the C treatment. Despite large treatment differences in NPP, R_A, and carbon allocation, carbon use efficiency (CUE=NPP/GPP) averaged 0.42 and was unaffected by manipulating site resources. Ecosystem respiration (R_E), the sum of S_ff, and above ground R_A, ranged from 12.8 to 20.2 Mg C ha^?1 yr^?1. S_ff contributed the largest proportion of R_E, but the relative importance of S_ff decreased from 0.63 in C treatments to 0.47 in IF treatments because of increased aboveground R_A. Aboveground woody tissue R_A was 15% of R_E in C and I treatments compared to 25% of R_E in F and IF treatments. Net ecosystem productivity (NEP=GPP‐R_E) was roughly 0 in the C and I treatments and 6.4 Mg C ha^?1 yr^?1 in F and IF treatments, indicating that non‐fertilized treatments were neither a source nor a sink for atmospheric carbon while fertilized treatments were carbon sinks. In these young stands, NEP is tightly linked to NPP; increased ecosystem carbon storage results mainly from an increase in foliage and perennial woody biomass.     

Estimation of a Joint Distribution Function with Multivariate Interval‐Censored Data when the Nonparametric MLE is not Unique

A nonparametric estimator of a joint distribution function F₀ of a d‐dimensional random vector with interval‐censored (IC) data is the generalized maximum likelihood estimator (GMLE), where d ≥ 2. The GMLE of F₀ with univariate IC data is uniquely defined at each follow‐up time. However, this is no longer true in general with multivariate IC data as demonstrated by a data set from an eye study. How to estimate the survival function and the covariance matrix of the estimator in such a case is a new practical issue in analyzing IC data. We propose a procedure in such a situation and apply it to the data set from the eye study. Our method always results in a GMLE with a nonsingular sample information matrix. We also give a theoretical justification for such a procedure. Extension of our procedure to Cox's regression model is also mentioned.     

Chiral metal complexes. Part 22. Stereoisomers of the dichloro [3,6-diaza-2S,7S-di(2-pyridyl)octane] - cobalt(III) ion and related species

The reaction of 3,6-diaza-2S,7S-di(2-pyridyl)- octane, S,S-peaen, with Co(II) and O₂ in aqueous solution yields a mixture, from which may be isolated three chelate diastereomers after the addition of HCl and HClO₄. These are δ-α-[Co(S,S-peaen)Cl₂]- ClO₄ and its Λ-α and Δ-β analogues. Previous workers had reported that a second β-diastereoisomer could be obtained but it has been shown that this is in fact an isomeric mixture of both Δ-α- and Λ-α- [Co(S,S-peaen)Cl₂]ClO₄. All three isomers react with oxalate anions to form an apparently unique product Λ-α-[Co(S,S-peaen)ox]⁺ in aqueous solution and which can be crystallized as its perchlorate salt. Two of the reactions reported represent unusual examples of octahedral inversions.     

Estimation of the diversity between DNA calorimetric profiles,differential melting curves and corresponding melting temperatures

The Poland–Fixman–Freire formalism was adapted for modeling of calorimetric DNA melting profiles, and applied to plasmid pBR 322 and long random sequences. We studied the influence of the difference (H_GC?H_AT) between the helix‐coil transition enthalpies of AT and GC base pairs on the calorimetric melting profile and on normalized calorimetric melting profile. A strong alteration of DNA calorimetrical profile with H_GC?H_AT was demonstrated. In contrast, there is a relatively slight change in the normalized profiles and in corresponding ordinary (optical) normalized differential melting curves (DMCs). For fixed H_GC?H_AT, the average relative deviation (S) between DMC and normalized calorimetric profile, and the difference between their melting temperatures (T_cal?T_m) are weakly dependent on peculiarities of the multipeak fine structure of DMCs. At the same time, both the deviation S and difference (T_cal?T_m) enlarge with the temperature melting range of the helix‐coil transition. It is shown that the local deviation between DMC and normalized calorimetric profile increases in regions of narrow peaks distant from the melting temperature.     

The structure of Λ-β1-[Co(R,R-picchxn)(S-tyr)]Br2 · 3.5H2O and solution configuration of Λ-β1-[Co(R,R-picchxn)(aromatic S-aminoacidate)] complexes: model systems for the investigation of non-covalent aromatic interactions

Intramolecular non-covalent interactions involving aromatic residues in the ternary species Λ-β₁-[Co(R,R-picchxn)(S-aa)]²⁺ (aa=Tyr, OMe-tyr or Phe) have been investigated. Such interactions are important to discriminatory processes associated with molecular recognition in chemical and biochemical systems. The single-crystal X-ray study of Λ-β₁-[Co(R,R-picchxn)(S-tyr)]Br₂ · 3.5H₂O demonstrates the influence of intramolecular π-π and bifurcated NH-π interactions in determining the molecular conformation of the complex cation in the solid state. The Co(III) complexes synthesised are diamagnetic, and have been fully assigned in solution using multidimensional NMR techniques. Remarkably, the solid state conformation observed for Λ-β₁-[Co(R,R-picchxn)(S-tyr)]²⁺ has been shown to predominate in solutions of all the complexes, as evidenced by appropriate rOe correlations. ¹H NMR measurements carried out in order to determine equilibrium rotamer distributions confirm the dominance of this conformer in solution. NMR measurements also show that rotamer populations are relatively unchanged at elevated temperatures and in a variety of solvents. The results of this detailed study, which demonstrate the significance of non-covalent interactions involving aromatic residues to the determination of the molecular conformation, serve to highlight the suitability of these simple ternary Co(III) complexes to act as models for such interactions.     

Using complementary approaches to estimate survival of juvenile and adult Eastern Kingbirds

ABSTRACT Survival rates of young birds during the period between nest departure and their first breeding season is an important but difficult statistic to measure because of low natal site fidelity, especially for long‐distance migrants. From 2002 to 2008, we conducted a capture‐mark‐resight study of Eastern Kingbirds (Tyrannus tyrannus), a Nearctic‐Neotropical migrant, at Malheur National Wildlife Refuge, Oregon, to estimate juvenile (S_J) and adult (S_A) survival. The return rate of juvenile kingbirds was high (0.224) and not significantly different from program MARK's estimate of S_J (0.291). On average, and for both sexes, program MARK's estimate of S_A for birds banded as nestlings (0.64) was similar to that for birds first banded as adults (0.65). Enumeration methods and MARK yielded similar estimates of S_A, especially for males banded as adults. We attribute the similarity of resighting rate of birds banded as nestlings to S_J and the similarity of S_A estimated using program MARK and by enumeration methods to the high site fidelity of most juvenile and adult kingbirds at our ecologically isolated study site. An independent estimate of S_J calculated using local estimates of population growth and average annual production of young per year suggested that true S_J and S_A were probably slightly higher than program MARK's estimates because of undocumented permanent emigration, especially of birds first banded as adults. Demographic balancing suggests that true S_A and S_J were roughly 0.70 and 0.30, respectively. In general, our multiple estimates of S_J were similar. However, program MARK estimates of S_J tended to be lower than those produced by demographic balancing. Because of the difficulty in differentiating permanent emigration and mortality, and the affect it has on empirical estimates of survival, we urge researchers to use multiple methods of survival estimation, when possible, to validate the precision of their estimates.     

Carbon losses due to soil warming: Do autotrophic and heterotrophic soil respiration respond equally?

Global warming has the potential to increase soil respiration (R_S), one of the major fluxes in the global carbon (C) cycle. R_S consists of an autotrophic (R_A) and a heterotrophic (R_H) component. We combined a soil warming experiment with a trenching experiment to assess how R_S, R_A, and R_H are affected. The experiment was conducted in a mature forest dominated by Norway spruce. The site is located in the Austrian Alps on dolomitic bedrock. We warmed the soil of undisturbed and trenched plots by means of heating cables 4 °C above ambient during the snow‐free seasons of 2005 and 2006. Soil warming increased the CO₂ efflux from control plots (R_S) by ∼45% during 2005 and ∼47% during 2006. The CO₂ efflux from trenched plots (R_H) increased by ∼39% during 2005 and ∼45% during 2006. Similar responses of R_S and R_H indicated that the autotrophic and heterotrophic components of R_S responded equally to the temperature increase. Thirty‐five to forty percent or 1 t C ha⁻¹ yr⁻¹ of the overall annual increase in R_S (2.8 t C ha⁻¹ yr⁻¹) was autotrophic. The remaining, heterotrophic part of soil respiration (1.8 t C ha⁻¹ yr⁻¹), represented the warming‐induced C loss from the soil. The autotrophic component showed a distinct seasonal pattern. Contribution of R_A to R_S was highest during summer. Seasonally derived Q₁₀ values reflected this pattern and were correspondingly high (5.3–9.3). The autotrophic CO₂ efflux increase due to the 4 °C warming implied a Q₁₀ of 2.9. Hence, seasonally derived Q₁₀ of R_A did not solely reflect the seasonal soil temperature development.     

Rhizospheric and heterotrophic components of soil respiration in six Chinese temperate forests

Partitioning soil respiration (R_S) into heterotrophic (R_H) and rhizospheric (R_R) components is an important step for understanding and modeling carbon cycling in forest ecosystems, but few studies on R_R and R_H exist in Chinese temperate forests. In this study, we used a trenching plot approach to partition R_S in six temperate forests in northeastern China. Our specific objectives were to (1) examine seasonal patterns of soil surface CO₂ fluxes from trenched (R_T) and untrenched plots (R_UT) of these forests; (2) quantify annual fluxes of R_S components and their relative contributions in the forest ecosystems; and (3) examine effects of plot trenching on measurements of R_S and related environmental factors. The R_T maximized in early growing season, but the difference between R_UT and R_T peaked in later summer. The annual fluxes of R_H and R_R varied with forest types. The estimated values of R_H for the Korean pine (Pinus koraiensis Sieb. et Zucc.), Dahurian larch (Larix gmelinii Rupr.), aspen‐birch (Populous davidiana Dode and Betula platyphylla Suk.), hardwood (Fraxinus mandshurica Rupr., Juglans mandshurica Maxim. and Phellodendron amurense Rupr.), Mongolian oak (Quercus mongolica Fisch.) and mixed deciduous (no dominant tree species) forests averaged 89, 196, 187, 245, 261 and 301 g C m⁻² yr⁻¹, respectively; those of R_R averaged 424, 209, 628, 538, 524 and 483 g C m⁻² yr⁻¹, correspondingly; calculated contribution of R_R to R_S (RC) varied from 52% in the larch forest to 83% in the pine forest. The annual flux of R_R was strongly correlated to biomass of roots <0.5 cm in diameter, while that of R_H was weakly correlated to soil organic carbon concentration at A horizon. We concluded that vegetation type and associated carbon metabolisms of temperate forests should be considered in assessing and modeling R_S components. The significant impacts of changed soil physical environments and substrate availability by plot trenching should be appropriately tackled in analyzing and interpreting measurements of R_S components.     

Trends and methodological impacts in soil CO2 efflux partitioning: A metaanalytical review

Partitioning soil carbon dioxide (CO₂) efflux (R_S) into autotrophic (R_A; including plant roots and closely associated organisms) and heterotrophic (R_H) components has received considerable attention, as differential responses of these components to environmental change have profound implications for the soil and ecosystem C balance. The increasing number of partitioning studies allows a more detailed analysis of experimental constraints than was previously possible. We present results of an exhaustive literature search of partitioning studies and analyse global trends in flux partitioning between biomes and ecosystem types by means of a metaanalysis. Across all data, an overall decline in the R_H/R_S ratio for increasing annual R_S fluxes emerged. For forest ecosystems, boreal coniferous sites showed significantly higher (P<0.05) R_H/R_S ratios than temperate sites, while both temperate or tropical deciduous forests did not differ in ratios from any of the other forest types. While chronosequence studies report consistent declines in the R_H/R_S ratio with age, no difference could be detected for different age groups in the global data set. Different methodologies showed generally good agreement if the range of R_S under which they had been measured was considered, with the exception of studies estimating R_H by means of root mass regressions against R_S, which resulted in consistently lower R_H/R_S estimates out of all methods included. Additionally, the time step over which fluxes were partitioned did not affect R_H/R_S ratios consistently. To put results into context, we review the most common techniques and point out the likely sources of errors associated with them. In order to improve soil CO₂ efflux partitioning in future experiments, we include methodological recommendations, and also highlight the potential interactions between soil components that may be overlooked as a consequence of the partitioning process itself.     

Habitat modeling used to predict relative abundance of bobcats in Iowa

We combined observations of bobcats (Lynx rufus) from bowhunters with remotely-sensed data to build models that describe habitat and relative abundance of this species in the agricultural landscape of Iowa, USA. We calculated landscape composition and configuration from publicly available land cover, census, road, hydrologic, and elevation data. We used multiple regression models to examine county-level associations between several explanatory variables and relative abundance of bobcats reported by surveyed bowhunters in each county. The most influential explanatory variables in the models were metrics associated with the presence of grassland, including Conservation Reserve, along with configuration of this perennial habitat with forests, although human population density and abundance of eastern cottontails (Sylvilagus floridanus) also correlated with abundance of bobcats. Validation of predictions against 3 years of independent data provided confidence in the models, with 66% of predictions within 1 bobcat/1,000 hunter-hours and 95% within 5 bobcats/1,000 hunter-hours of observed values. Once we accounted for landscape differences, no residual spatial trend was evident, despite relatively recent bobcat recolonization of Iowa. Models suggested that future range expansion of the bobcat population may be possible in some northern Iowa counties where habitat composition is similar to counties in southern Iowa where bobcats are abundant. Results from the county-level model have been useful to the Iowa Department of Natural Resources in evaluating the expansion of this once rare species and for delineating harvest opportunities. © 2011 The Wildlife Society.     

Benzopyran Derivatives and an Aliphatic Compound from a Mangrove Endophytic Fungus Penicillium citrinum QJF‐22

Two new benzopyran derivatives, (2R,4S)‐5‐methoxy‐2‐methyl‐3,4‐dihydro‐2H‐1‐benzopyran‐4‐ol and (2S,4R,2′S,4′R)‐4,4′‐oxybis(5‐methoxy‐2‐methyl‐3,4‐dihydro‐2H‐1‐benzopyran), and a new aliphatic compound, (3E,5Z,8S,10E)‐8‐hydroxytrideca‐3,5,10,12‐tetraen‐2‐one, together with three known benzopyran derivatives, were obtained from a mangrove endophytic fungus Penicillium citrinum QJF‐22 collected in Hainan island. Their structures were determined by analysis of spectroscopic data and the relative configuration of (2R,4S)‐5‐methoxy‐2‐methyl‐3,4‐dihydro‐2H‐1‐benzopyran‐4‐ol was also confirmed by single‐crystal X‐ray diffraction. The absolute configurations of four compounds were established by comparison of ECD spectra to calculations. The configuration of (3E,5Z,8S,10E)‐8‐hydroxytrideca‐3,5,10,12‐tetraen‐2‐one was confirmed by comparison of optical value to the similar compound. The configurations of the compounds (2S,4S)‐5‐methoxy‐2‐methyl‐3,4‐dihydro‐2H‐1‐benzopyran‐4‐ol and (2R,4R)‐5‐methoxy‐2‐methyl‐3,4‐dihydro‐2H‐1‐benzopyran‐4‐ol were first determined. (3R,4S)‐3,4,8‐Trihydroxy‐3,4‐dihydronaphthalen‐1(2H)‐one exhibited moderate inhibitory effects on LPS‐induced NO production in RAW264.7 cells with IC₅₀ of 44.7 μM, and without cytotoxicity to RAW264.7 cells within 50 μM.     

Genetic diversity within Oryza rufipogon germplasms preserved in Chinese field gene banks of wild rice as revealed by microsatellite markers

Nineteen microsatellite markers were employed to evaluate the genetic diversity of 92 accessions of common wild rice Oryza rufipogon Griff., which represent a significant portion of the distribution range from field gene banks of China. In comparison, a total of 57 varieties from most of the rice growing areas in China were also analyzed. The microsatellite analysis revealed a considerable amount of genetic diversity resided within the preserved wild rice germplasms. In all, the nineteen microsatellites revealed 328 alleles. The number of alleles per locus varied widely among these markers, ranging from 6 at RM242 to 30 at RM206. A comparison of the genetic parameters showed that wild rice strains preserved in the field gene banks (na = 17.27; R _S = 15.66; H _S = 0.86; H _T = 0.852; H _O = 0.307) possess much higher genetic diversity than cultivated rice varieties (na = 8.27; R _S = 8.14; H _S = 0.75; H _T = 0.758; H _O = 0.051). A total of 196 alleles detected in the wild rice could not be found in cultivated rice, suggesting that about 60% of the alleles of wild rice might be lost during the process of rice domestication. This result shows that these ex situ preserved wild rice strains are of great importance for the discovery and utilization of novel genes in the future rice breeding practices. Considerably abundant genetic variability detected within the studied wild rice germplasms could be comparable to that previously found in a wide sampling of 47 natural populations (na = 16.17; H _S = 0.67; H _O = 0.229), demonstrating that developing field gene banks of wild rice is a necessary and efficient way for preserving genetic diversity of wild rice resources. To determine minimum microsatellites that could distinguish these wild rice accessions, the phylogenetic trees constructed by means of the combinations of different microsatellites suggested that the five highly polymorphic microsatellites could clearly identify these samples. High polymorphisms of rice microsatellite loci and their great resolving power will be particularly helpful for germplasm evaluation and evolutionary studies for better strengthening the conservation and utilization of genetic diversity of wild rice in the field gene banks.     

Genetic Diversity in Monilinia laxa Populations in Peach Orchards in Spain

One‐hundred and forty‐four random amplified polymorphic DNA markers, of which 59 were polymorphic and 85 monomorphic, were used to assess the genetic diversity and to study the structure of Monilinia laxa populations in Spain. Twenty‐one isolates collected from several orchards (subpopulations), in various years and in various hosts, were used. The analysis of population structure revealed that genetic diversity within orchards (H_S) accounted for 97% of the total genetic diversity (H_T), while genetic diversity among the orchards represented only 3%. The relative magnitude of gene differentiation between subpopulations (G_ST) and the estimate of the number of migrants per generation (N_m) averaged 0.032 and 15.1 respectively. The results obtained in dendrograms were in accordance with the gene diversity analysis. Grouping of isolates in the dendrogram was independent of whether they came from the same or different orchards. There was no relationship between clustering among isolates from distinct years and hosts. The relative importance of several evolutionary forces in populations of M. laxa is discussed, together with implications for the management of brown rot.     

A 30% reduction in switchgrass rhizome reserves did not decrease biomass yield

A long-standing question in perennial grass breeding and physiology is whether yield improvement strategies could compromise winter survival. Since perennial grasses rely on stored carbohydrates for winter maintenance and spring regrowth, yield improvement strategies could reduce winter survival if they increase biomass and grain yields at the expense of carbon allocation to storage. Therefore, it is crucial to comprehend the dependence of regrowth on storage reserves. We experimentally depleted switchgrass (Panicum virgatum L.) rhizome reserves by storing rhizomes for 2 weeks at 5°C (control treatment) and 25°C (reserve-depleted treatment). During the storage period rhizome respiration was 5.3× higher at 25°C (0.010 μmol CO₂ g⁻¹ min⁻¹ at 5°C vs. 0.054 μmol CO₂ g⁻¹ min⁻¹ at 25°C; p < 0.0001) and the starch content was depleted by 30% by the end of storage. Surprisingly, reserve-depleted switchgrass had 60% larger leaf area (LA; LA_control = 149 cm² pot⁻¹ vs. LA_depleted = 239 cm² pot⁻¹; p = 0.013) and produced ~40% more aboveground biomass than control plants (9.46 g pot⁻¹ vs. 6.63 g pot⁻¹; p = 0.112). In addition, reserve-depleted switchgrass restored its rhizome starch reserves to pre-storage levels. Switchgrass showed a large plasticity among its source-sink components to buffer the imposed reserve depletion. It increased plant photosynthesis by increasing the photosynthetic leaf area while keeping photosynthesis constant on a leaf area basis and readjusted the timing and activity of sink organs. These results suggest that switchgrass, and potentially other perennial grasses, largely over-invest in storage reserves. Therefore, current breeding strategies in perennial grasses aimed to extend the aboveground growing season should not compromise crop persistence. Our study also has implications on long-term yield dynamics as it highlights sink limitations as potential driver of the yield decline commonly observed in perennial grasses 5+ years after cultivation.