Ribosome-binding sites on chloroplastrbcL andpsbA mRNAs and light-induced initiation of D1 translation

Chloroplast ribosome-binding sites were identified on the plastidrbcL andpsbA mRNAs using toeprint analysis. TherbcL translation initiation domain is highly conserved and contains a prokaryotic Shine-Dalgarno (SD) sequence (GGAGG) located 4 to 12 nucleotides upstream of the initiator AUG. Toeprint analysis ofrbcL mRNA associated with plastid polysomes revealed strong toeprint signals 15 nucleotides downstream from the AUG indicating ribosome binding at the translation initiation site.Escherichia coli 30S ribosomes generated similar toeprint signals when mixed withrbcL mRNA in the presence of initiator tRNA. These results indicate that plastid SD sequences are functional in chloroplast translation initiation. ThepsbA initiator region lacks a SD sequence within 12 nucleotides of the initiator AUG. However, toeprint analysis of soluble and membrane polysome-associatedpsbA mRNA revealed ribosomes bound to the initiator region.E. coli 30S ribosomes did not associate with thepsbA translation initiation region.E. coli and chloroplast ribosomes bind to an upstream region which contains a conserved SD-like sequence. Therefore, translation initiation onpsbA mRNA may involve the transient binding of chloroplast ribosomes to this upstream SD-like sequence followed by scanning to localize the initiator AUG. Illumination 8-day-old dark-grown barley seedlings caused an increase in polysome-associatedpsbA mRNA and the abundance of initiation complexes bound topsbA mRNA. These results demonstrate that light modulates D1 translation initiation in plastids of older dark-grown barley seedlings.     

Phylogenetic relationships in theCampanulales based onrbcL sequences

Phylogenetic relationships within the angiosperm orderCampanulales were investigated by comparative sequencing of the chloroplast generbcL. CompleterbcL sequences were obtained for ten species in six families within the order. These data were analyzed along with previously publishedrbcL sequences from other taxa (for a total of 117 species) within the subclassAsteridae and outgroups, producing 32 equally parsimonious trees. A subset consisting of 44 of these taxa was then chosen and more rigorous analyses performed, resulting in four equally parsimonious trees. Results indicate that two major clades roughly corresponding to traditionally circumscribedAsterales andCampanulales exist as sister taxa. In particular, therbcL trees indicate thatSphenoclea is not a member ofCampanulales orAsterales, thatPentaphragma is more closely allied toAsterales thanCampanulales, that theCyphiaceae are not monophyletic, thatCampanulaceae andLobeliaceae are not sister taxa, and thatStylidiaceae are correctly placed withinCampanulales.     

中国特有属藤山柳属(猕猴桃科)植物的叶表皮形态及其分类学意义

由于形态特征变异和地理分布区域存在重叠,中国特有属藤山柳属(猕猴桃科)的物种划分问题长期以来存在争议,曾被分为20种或修订为含1种4个亚种的单型属。该研究选取了在形态和地理分布上有代表性的29个居群的184份标本,利用光学显微镜和扫描电镜观察了叶表皮形态和微形态特征,以探讨它们的分类学意义。结果表明:(1)藤山柳属植物叶表皮毛被的形态和微形态特征有3类,即光滑-短柱状毛、刚毛-长柱状毛/长刺毛、绒毛-单列多细胞毛,且这些特征在居群间差异明显,并各具明显的地理分布格局,支持把藤山柳属分为3类,即光滑类、刚毛类和绒毛类。(2)3类藤山柳植物在个别居群表现出部分同域分布现象,在峨眉山不同海拔高度的3个居群存在垂直地带性分布特点。(3)藤山柳属植物叶表皮的其他形态特征,如不规则型表皮细胞、6类气孔器、叶表皮初级蜡质纹饰以网状隆起为主,伴随着2～4类次级纹饰,在居群间变化多样等均没有明显的分类学意义。(4)由于具有相同的叶表皮形态特征和地理分布,建议把繁花藤山柳合并到绒毛藤山柳,故支持藤山柳属是1个正处于分化进程中的单型属,包括1个种3个亚种。     

Identity of Schizachyrium sulcatum and S. brevifolium (Poaceae: Andropogoneae)

Schizachyrium sulcatum, distributed in Brazil, Bolivia and Colombia, is described, illustrated, and reported for the first time from Peru and Venezuela. Synonymy, geographical distribution, ecology, and a list of representative specimens examined are provided. Characters of taxonomic value are established in order to differentiate this species fromS. brevifolium. A comparative study based on morphology, leaf anatomy, and micromorphological features of the spikelets and leaf blade are included. The multivariate analysis based on morphological variables allowsS. sulcatum to be distinguished clearly fromS. brevifolium.     

Comparative life history of five HokkaidoPolystichum ferns with reference to leaf development in relation to altitudinal distribution

The temperate fernsPolystichum craspedosorum, P. retroso-paleaceum, P. tripteron, P. braunii andP. microchlamys are distributed widely in Hokkaido: on 13 Hokkaido mountains their average altitudinal distributions are 450, 479, 570, 689 and 964 m above sea level, respectively. The developmental stage of the sporophytic leaf is expressed by the “number of venation” (NV, the number of veins branching from the midrib of the leaf), which, inPolystichum ferns, is itself a qualitative expression of the phase-change from sterile to fertile leaf production and is more discriminatory than leaf area, length or dry weight. Usually, the developmental stage structure of the fertile leaf expressed by NV in the fivePolystichum ferns showed a normal distribution. Among the fourPolystichum ferns that grow in the forest understory of Hokkaido's cool temperate regions, a good correlation was found between the mean altitude of vertical distribution and the maximum NV of the leaf (r=−0.993) and the initiation of maturity in the relative developmental stage (r=0.991) of the ferns.Polystichum craspedosorum found on cliffs, however, matures at much earlier stage and has the smallest maximum NV. In the developmental stage expressed by the NV, the initiation of fertility and maximum NV seem to be correlated with altitudinal distribution and habitat in populations ofPolystichum ferns in Hokkaido. Contribution No. 2694 from the Inst. of Low Temp. Sci., Hokkaido University.     

极小种群野生植物对开蕨种群结构特征和群落物种多样性

以国家Ⅱ级保护极小种群野生植物——对开蕨(Phyllitis scolopendrium)为研究对象,分析了在海拔729、1008m群落内,其种群大小、分布频度和密度,个体形态特征指标及其在种群内、种群间差异,苗高分布规律、相对苗高组替代年龄级结构,分布格局和群落各层次的物种多样性,群落的相似性。结果表明:对开蕨在自然分布区内为偶见种,呈斑块状分布。在400m~2内,海拔1008m处(01群落)种群密度为31株,样地分布频度为43.75%,最大密度15株/25m~2;海拔729m处(02群落)种群密度为91株,样地分布频度为93.75%,最大密度30株/25m~2。通过对其自然苗高,叶片数量,有孢子囊叶片数量,最大叶片长、宽值,最小叶片长、宽值,冠径,叶片厚度7个形态指标的分析显示,种群内变异较大,随着植株高度(年龄)的增加,其变异系数均随之减小而趋于稳定;种群间在自然苗高,最大叶片长度和宽度,成熟孢子叶片数量,冠径,叶片厚度上达到极显著差异(P0.01)。其苗高分布呈现双峰型,01种群波谷出现在15.1—20.0cm处;02种群波谷出现在10.1—15.0cm处,两群落均显示有一次较大的更新过程,同时01种群在40.1—45.0cm出现间断。年龄级分析得出,01种群划分为5个龄级,近于正态分布;02种群划分为4个龄级,为倒J型分布;两种群分别处于中龄期和幼龄期,没有出现衰退型年龄结构。格局分析得出,对开蕨种群均为聚集分布。两群落的乔木、灌木、草本层的Shannon-Wiener指数、Pielou均匀度指数、Marglef丰富度指数、生态优势度和种间相遇机率较低(与地带顶级植被相比)而且分布不均;对开蕨在两群落的草本层中重要值较低,仅为伴生种。两群落相似性分析显示,乔木、灌木、草本层的相似度指数分别为66.67%、69.23%和38.46%,草本层差异较大。     

Measuring summer patterns of ascospore release by saltmarsh fungi

One potentially important type of flux from standing-decaying marshgrass is the production and release of ascospores. The most extensive measurements of ascospore release from the principal marshgrass (Spartina alterniflora, smooth cordgrass) of saltmarshes of the eastern coastal United States involved an arbitrary, weeklong period of wet incubation of leaf-blade samples. We examined the possibility that shorter incubations would yield higher estimates of hourly rates of ascospore release, testing wet incubations of 3 to 71 h, using standing-decaying leaf blades of smooth cordgrass from low on living shoots and high on dead shoots. Incubations of 31 h appeared to be optimal. Species compositions of ascospores expelled from the two leaf types were distinctly different: high leaves yielded primarily aMycosphaerella species orPhaeosphaeria halima; low leaves yielded primarilyPhaeosphaeria spartinicola or theMycosphaerella species. All of these species consistently exhibited high coefficients of variation (>100%) for their mean rates of release of ascospores. Only theMycosphaerella species on high leaves gave evidence of a delayed onset of ascospore expulsion during incubation, and this evidence was equivocal. Grand mean rates of ascospore release forP. spartinicola and theMycosphaerella species were, respectively, 106 and 238 spores cm⁻² abaxial leaf area h⁻¹.     

Quantitative expression of fern leaf development and fertility inPolystichum tripteron (Aspidiaceae)

To elucidate the quantitative and qualitative expression of fern development, various features of leaf-size and morphology were examined on leaves ofPolystichum tripteron (Aspidiaceae) in Japan. Among ten parameters, the number of branches of the leaf midrib (NV) proved to be the most successful for discrimination between fertile and sterile leaf populations. In the phase-change from sterile to fertile leaves, the NV parameter also gave the strongest correlation, increasing with fertility (r = 0.983), and is therefore a useful tool for research into the life history characteristics of ferns.Contribution no. 2751 from the Institute of Low Temperature Science, Hokkaido University.     

New variation and biosystematic patterns detected by allozyme and morphological comparisons inLimnanthes sect.Reflexae (Limnanthaceae)

Sixty-one populations ofLimnanthes sect.Reflexae were surveyed for variation at 19 allozyme loci and reassessed for their morphological diversity and biosystematic relationships. Cluster analysis of allozyme data at individual population level provided evidence for a fairly good fit with the earlier systematic work on this genus but both morphological and allozyme data together defined some new clusters as well as exceptional entities. For example, only var.rosea of the fourL. douglasii varieties described byMason (1952) on the basis of geographical distribution, flower color and leaf morphology, remained as a distinct entity; the others were realigned along new geographic boundaries.L. striata appeared to have two well-developed subgroups, one of which was closely related to theL. douglasii complex. Further ecogeographic and hybridization studies are needed to fully describe these new phenetic findings in the context of phylogenetic inference. SectionInflexae was readily distinguished from sect.Reflexae by several diagnostic loci, thus supporting the validity of this division. Interspecific variation levels and population differentiation inLimnanthes were high when compared to other plant taxa, possibly indicating highly dynamic evolutionary processes for which variable habitats and extreme subdivision within species have been suggested as explanations.     

毛叶粉背蕨配子体的泌粉现象及其系统学意义

为探讨蕨类配子体泌粉现象的系统学意义,对5种粉背蕨属(Aleuritopteris)植物的配子体发育过程进行了观察。结果表明,毛叶粉背蕨(A.squamosa)的配子体(通常是雌配子体)也具有泌粉现象,而其他4种的配子体不具粉状分泌物。基于叶绿体rbc L序列的证据表明,毛叶粉背蕨与粉背蕨属其他植物、中国蕨属(Sinopteris)等构成一个具有强烈支持率的单系,即Hemionitids支,该支与美洲分布的隐囊蕨类互为姐妹群。因此,配子体泌粉现象在碎米蕨类中并非隐囊蕨类植物所特有,泌粉现象的产生,在系统发育上至少涉及2次独立的演化事件。毛叶粉背蕨的泌粉现象多发生在雌性配子体上,暗示配子体的泌粉可能与配子体的雌性分化和胚发生发育相关。     

Molecular phylogenetic analysis ofChrysosplenium (Saxifragaceae) in Japan

The phylogeny of Japanese species ofChrysosplenium (Saxifragaceae) was examined using variation in DNA sequences. Sequences ofrbcL andmatK genes were compared for their feasibility for reconstructing the phylogeny ofChrysosplenium, and thematK sequences was found to give greater resolution. All but one of the 17 Japanese species have been examined formatK gene sequences and phylogenetic analysis of these data resulted in eight most parsimonious trees of 390 steps and a consistency index (Cl) of 0.823. The molecular phylogeny obtained was generally in agreement with Hara's (1957) classification based upon phenotypic similarity, although a conclusion needs extensive examination of the genus on a world-wide level. Using the phylogenetic data, character evolution was examined, especially in the characters traditionally used for grouping infrageneric taxa. Differentiation of opposite and alternate phyllotaxis appears to have occurred only once in the course of evolution ofChrysosplenium.     

Morphological and anatomical differentiation ofVellozia hirsuta populations (Velloziaceae)

The morphological and leaf anatomical differentiation ofVellozia hirsuta is analysed and classified into several types (A1, A2, A4, B3, B5, C3). The species has a relatively wide distribution in the campos rupestres of Minas Gerais in Brazil. The variation of the isolated populations on different mountain ranges is complex, does not follow a clear geographical pattern, and defies taxonomic classification.     

The natural delimitation ofCentaurea (Asteraceae: Cardueae): ITS sequence analysis of theCentaurea jacea group

Taxonomic complexity has hindered partitioning the genusCentaurea into natural subdivisions, even though it has long been recognized as an unwieldy, artificial assemblage. Most of the remaining difficulties center in theCentaurea jacea group, whose taxa share a common advanced type of pollen. Because it comprises half the species of the genusCentaurea, as well as five other disputed genera previously segregated fromCentaurea (Chartolepis, Cheirolepis, Cnicus, Grossheimia andTomanthea), theCentaurea jacea group is a significant taxonomic challenge. Newer molecular approaches are useful for resolving complex relationships because they provide more precise inferences of evolutionary relationships than traditional morphological characters. Sequences of the Internal Transcribed Spacers (ITS) of nuclear ribosomal DNA were analyzed for a comprehensive sample of this group. Results indicated that theCentaurea jacea group is monophyletic and includes the segregated genera, but not two other genera (Oligochaeta andZoegea), whose inclusion in theCentaurea jacea group was doubtful. In addition to pollen morphology, the ITS phylogeny is also supported by karyological evidence and by good correlation with biogeographic distribution of the species. The monophyly of theCentaurea jacea group suggests that a natural delimitation ofCentaurea that minimizes nomenclatural changes is possible, but only if a new type of the genus is designated.     

Systematics and biogeography of the Andean genusEriocnemis (Aves: Trochilidae)

Summary With 11 currently recognised species, the genusEriocnemis (Reichenbach, 1849) is one of the most diversified Andean trochilid groups occupying mainly open montane habitats such as the edges of cloud forest or páramos. On the basis of distributional and morphological patterns, this study highlights the geographical variation and biogeography of the taxon. Characteristics common to all these species are the greenish dorsal plumage, the conspicuous and mostly whitish tibial tufts, and a fairly pronounced tail bifurcation. With the help of plumage synapomorphies for a cladistic analysis (PAUP*), several species groups or superspecies can be distinguished: theE. vestitus group (incl.E. vestitus, E. godini, E. nigrivestis), theE. luciani group (incl.E. luciani, E. cupreoventris, E. sapphiropygia), and theE. alinae group (incl.E. alinae, E. mirabilis).E. glaucopoides, E. mosquera, andE. derbyi differ quite widely in morphology and ecological requirements from the other species. Three new subspecies are described,E. vestitus arcosi from southern Ecuador and northern Peru, andE. luciani baptistae from central and southern Ecuador. A previously overlooked specimen ofE. luciani from the Andes of Mérida represents the first species record for Venezuela, about 1100 km northeast of the main population range, and should be recognised taxonomically asE. luciani meridae, subsp. nov., on the basis of its unique plumage morphology and geographical separation. Additionally, the unique type ofE. ventralis (Salvin, 1891) is probably of hybrid origin (E. vestitus × cupreoventris). The genus may have evolved in the northern Andes, subsequently spreading southward and invading the central Andes. Its recent range and phylogenetic patterns indicate vicariance events as the major speciation factor inEriocnemis.In memoriam Dr. Luis F. Baptista (1941–2000)     

ERECTA is required for protection against heat-stress in the AS1/ AS2 pathway to regulate adaxial-abaxial leaf polarity in Arabidopsis

In seed plants, formation of the adaxial–abaxial polarity is of primary importance in leaf patterning. Since Arabidopsis thaliana (L.) Heynh. genes ASYMMETRIC LEAVES1 (AS1) and ASYMMETRIC LEAVES2 (AS2) are key regulators in specifying adaxial leaf identity, and ERECTA is involved in the AS1/AS2 pathway for regulating adaxial–abaxial polarity [L. Xu et al. (2003) Development 130:4097–4107], we studied the physiological functions of the ERECTA protein in plant development. We analyzed the effects of different environmental conditions on a special leaf structure in the as1 and as2 mutants. This structure, called the lotus-leaf, reflects a severe loss of adaxial–abaxial polarity in leaves. Higher concentrations of salt or other osmotic substance and lower temperature severely affected plant growth both in the wild type and the mutants, but did not affect lotus-leaf frequency in the as1 and as2 mutants. as1 and as2 mutants exhibited a very low lotus-leaf frequency at 22°C, a temperature that favors Arabidopsis growth. The lotus-leaf frequency rose significantly with an increase in growth temperature, and only in plants that are in the erecta mutation background. These results suggest that ERECTA function is required for reducing plant sensitivity to heat stress during adaxial–abaxial polarity formation in leaves.Abbreviations AS1, AS2 ASYMMETRIC LEAVES1, 2 - ER ERECTA     

Chloroplast DNA restriction site variation in theVernonieae (Asteraceae), an initial appraisal of the relationship of New and Old World taxa and the monophyly ofVernonia

Chloroplast DNA restriction site variation was examined for 35 taxa in theVernonieae and four outgroup tribes, using 17 restriction enzymes mapped for ca. 900 restriction sites per species; 139 mutations were found to be phylogenetically informative. Phylogenetic trees were constructed using Wagner and weighted parsimony, and evaluated by bootstrap and decay analyses. Relationships of Old and New World taxa indicate complex geographical relationships; there was no clear geographic separation by hemisphere. The relationships between Old and New World Vernonias found here support prior morphological analyses. The sister group to all New and most Old World taxa was composed of a small group of Old World species including yellow-flowered, trinervate-leaved species previously postulated to be basal in the tribe. The majority of both New and Old World taxa are derived from a lineage beginning with the monotypic genusStokesia, an endemic of the southeastern United States. The genusVernonia was also found to be paraphyletic within both the New and Old World. Available data do not support either the separation ofVernonia or the tribeVernonieae into geographically distinct lineages. The pattern of relationships within theVernonieae for taxa from North America, Asia, Africa, Central and South America is most similar to that of several other groups of both plants and animals with a boreotropical origin, rather than an origin in Gondwanaland. Such a pattern of distribution suggests more ancient vicariant events than are routinely postulated for theAsteraceae.     

TheUlmaceae, one family or two? Evidence from chloroplast DNA restriction site mapping

The Ulmaceae is usually split into two subgroups, referred to as either tribes or more commonly subfamilies (Ulmoideae andCeltidoideae). The two groups are separated, with some exceptions, on the basis of leaf venation, fruit type, seed morphology, wood anatomy, palynology, chemistry, and chromosome number. Propositions to separate the two groups as distinct families have never gained general acceptance. Recent morphological and anatomical data have suggested, however, that not only is family status warranted but thatCeltidaceae are more closely related toMoraceae and otherUrticales than toUlmaceae. In order to test these alternative sets of relationships, restriction site mapping of the entire cpDNA was done with nine rare cutting enzymes using 11 genera ofUlmaceae s. l., three other families of theUrticales, and an outgroup family from theHamamelidae. Cladistic analysis of the data indicates thatUlmaceae s. l. is not monophyletic and that distinct families (Ulmaceae andCeltidaceae) are warranted; thatUlmaceae is the sister group toCeltidaceae plus all other families in the order; and thatCannabaceae might be nested withinCeltidaceae. Familial placements of various problematic genera (e.g.Ampelocera, Aphananthe) are resolved and character evolution of key morphological, anatomical, chemical, and chromosomal features are discussed.