细菌麦芽糖淀粉酶在枯草芽孢杆菌中的诱导型异源表达

【目的】实现地衣芽孢杆菌麦芽糖淀粉酶在枯草芽孢杆菌中的高效异源表达,并研究该重组酶的酶学性质。【方法】克隆巨大芽孢杆菌木糖异构酶基因的启动子区域及其调控蛋白,构建一个大肠杆菌/芽孢杆菌穿梭型诱导表达质粒,使用该诱导型启动子介导麦芽糖淀粉酶编码基因,实现其在枯草芽孢杆菌中的功能表达。对重组枯草芽孢杆菌的诱导条件进行优化,提高麦芽糖淀粉酶的产量。【结果】获得了诱导表达麦芽糖淀粉酶基因的重组枯草芽孢杆菌菌株。最适诱导温度为45°C,最适诱导剂添加浓度为1%,最适添加诱导剂时间为接种培养9 h后。重组酶蛋白分子量大小为67 k D,对该酶的酶学性质研究发现,以可溶性淀粉为底物,反应生成麦芽糖和葡萄糖,其中麦芽糖含量为60.42%。重组酶最适作用温度为45°C,最适作用p H为6.5,Ca2+、Co2+、EDTA对该重组麦芽糖淀粉酶具有激活作用。【结论】通过木糖诱导表达系统可以实现麦芽糖淀粉酶在枯草芽孢杆菌中的高效诱导型表达,酶活最高可达296.64 U/m L发酵液,在工业上有着较好的应用前景。     

In vitro enzymatic modification of puerarin to puerarin glycosides by maltogenic amylase

Puerarin (daidzein 8-C-glucoside), the most abundant isoflavone in Puerariae radix, is prescribed to treat coronary heart disease, cardiac infarction, problems in ocular blood flow, sudden deafness, and alcoholism. However, puerarin cannot be given by injection due to its low solubility in water. To increase its solubility, puerarin was transglycosylated using various enzymes. Bacillus stearothermophilus maltogenic amylase (BSMA) was the most effective transferase used compared with Thermotoga maritima maltosyl transferase (TMMT), Thermus scotoductus 4-alpha-glucanotransferase (TS4alphaGTase), and Bacillus sp. I-5 cyclodextrin glucanotransferase (BSCGTase). TMMT and TS4alphaGTase lacked acceptor specificity for puerarin, which lacks an O-glucoside linkage between D-glucose and 7-OH-daidzein. The yield exceeded 70% when reacting 1% puerarin (acceptor), 3.0% soluble starch (donor), and 5U/100 microL BSMA at 55 degrees C for 45 min. The two major transfer products of the BSMA reaction were purified using C(18) and GPC chromatography. Their structures were identified as alpha-d-glucosyl-(1-->6)-puerarin and alpha-D-maltosyl-(1-->6)-puerarin using ESI+ TOF MS-MS and 13C NMR spectroscopy. The solubility of the transfer products was 14 and 168 times higher than that of puerarin, respectively.     

Enzymatic characterization of a maltogenic amylase from Lactobacillus gasseri ATCC 33323 expressed in Escherichia coli

A gene corresponding to a maltogenic amylase (MAase) in Lactobacillus gasseri ATCC 33323 (lgma) was cloned and expressed in Escherichia coli. The recombinant LGMA was efficiently purified 24.3-fold by one-step Ni-NTA affinity chromatography. The final yield and specific activity of the purified recombinant LGMA were 68% and 58.7 U/mg, respectively. The purified enzyme exhibited optimal activity for beta-CD hydrolysis at 55 degrees C and pH 5. The relative hydrolytic activities of LGMA to beta-CD, soluble starch or pullulan was 8:1:1.9. The activity of LGMA was strongly inhibited by most metal ions, especially Zn(2+), Fe(2+), Co(2+) and by EDTA. LGMA possessed some unusual properties distinguishable from typical MAases, such as being in a tetrameric form, having hydrolyzing activity towards the alpha-(1,6)-glycosidic linkage and being inhibited by acarbose.     

Myxococcus sp.V11海藻糖合酶TreS II分子改造 *

来源于黏细菌Myxococcus sp.V11的海藻糖合酶(trehalose synthase, EC 2.4.1.245)TreS II可通过转糖苷作用将麦芽糖转化成为海藻糖,在酶法生产海藻糖上显示出一定的应用潜力,但TreS II对热敏感,在60℃保温3h,酶活性丧失,限制了其应用范围.目的:拟探索TreS II影响热稳定性的氨基酸残基构成,通过对可能的氨基酸位点进行定点突变,以期获得耐热性的突变子,扩大TreS II应用范围.方法: 通过PCR介导的方法对TreS II可能影响到热稳定性的氨基酸Q3,A283,W374,R449和Y537进行定点突变,以野生型重组酶为对照,比较突变型与野生型的最适反应温度和最适反应pH,通过测定不同温度下保存不同时间后的残留酶活,检测突变子的耐热效果.结果: 研究表明突变子Q3D,A283R,W374D,R449Q和Y537H的比酶活与野生型无显著差异,且最适pH 和最适反应温度也未发生改变;A283R,Y537H在60℃条件下,3h后活性剩余68%;Q3D,W374D,R449Q在温度60℃时,3h后活性剩余35%.结论: TreS II分子结构中与金属离子结合的几个氨基酸残基的改变对蛋白质分子的耐热性具有显著影响.     

Cloning and Sequencing of an Original Gene Encoding a Maltogenic Amylase from <Emphasis Type="Italic">Bacillus</Emphasis> sp. US149 Strain and Characterization of the Recombinant Activity

A gene encoding maltogenic amylase from acidic Bacillus sp. US149 (maUS149) was cloned, sequenced and over-expressed in Escherichia coli. The nucleotide sequence analysis revealed an open reading frame (ORF) of 1749 bp encoding a protein of 582 residues. The alignment of deduced amino acid sequence revealed a relatively low homology with the already reported maltogenic amylases. In fact, its highest identity, of only 60%, was found with the maltogenic amylase of Thermus sp. IM6501. The recombinant enzyme (MAUS149) was found to be intracellular and was purified to homogeneity from the cell crude extract with a yield of 23%. According to PAGE analysis, under reducing and non-reducing conditions, the recombinant enzyme has an apparent molecular weight of 135 kDa and is composed of two identical subunits of 67.5 kDa each. The maximum activity was obtained at 40°C and pH 6.5. MAUS149 could be classified as a maltogenic amylase since it produces mainly maltose from starch, maltose and glucose from β-cyclodextrin, and panose from pullulan.     

Asymmetric overlap extension PCR method bypassing intermediate purification and the amplification of wild-type template in site-directed mutagenesis

By combining asymmetric PCR and overlap extension, we developed a novel asymmetric overlap extension PCR (AOE-PCR) method for site-directed mutagenesis which bypassed the need for intermediate purification and excluded the amplification of a wild-type template. This method was used to introduce single base mutations into a small GTPase gene from cotton and to simultaneously introduce two mutations just by repeating this method using the first round AOE-PCR products as template. Our results suggested that the AOE-PCR method represents a valuable improvement of the original overlap extension PCR for site-directed mutagenesis.     

优化重叠PCR法进行单链抗体基因扩增和点突变

利用重叠PCR技术扩增单链抗体基因或位点突变是抗体文库构建或稳定表达的关键和难点,国内外文献未见其方法学的系统报道.以不同VH、VL和Linker基因为拼接模板进行重叠PCR,针对影响重叠PCR扩增的拼接类型,引物设计,反应条件等进行优化.结果表明两段重叠连接比三段更容易实现,且扩增效果好;引物的互补序列长度一般应大于15 bp,且在18～24 bp 时扩增效果最好;退火温度在52～60℃,Mg2+浓度在1.5～2.5 mM时对拼接的效果影响较小;直接或间接使用拼接模板均可以实现重叠PCR的扩增.利用优化策略,首次构建了抗除虫菊酯的scFv基因文库并引入抗XAC糖蛋白scFv基因的点突变,为除虫菊酯抗体文库构建和抗XAC重组抗体的稳定表达奠定了基础.     

D190V点突变提高华根霉Rhizopus chinensis CCTCC M201021脂肪酶的最适温度和热稳定性

【目的】对来源于Rhizopus chinensis CCTCC M201021的脂肪酶进行了D190V定点突变, 提高该酶的最适温度和热稳定性。【方法】对毕赤酵母表达的突变酶D190V与野生型酶r27RCL进行酶学性质比较。【结果】D190V的最适温度比r27RCL高5 °C, 65 °C下的半衰期提高了一倍, 在其他性质方面, 突变酶D190V与r27RCL基本相似。【结论】通过结构分析表明, 定点突变D190V提高该酶稳定性的主要原因可能在于提高了突变位点所在的α螺旋的稳定性以及增强了稳定蛋白质结构的氢键作用力。     

Improvement in thermostability and psychrophilicity of psychrophilic alanine racemase by site-directed mutagenesis

A psychrophilic alanine racemase from Bacillus psychrosaccharolyticus has a higher catalytic activity than a thermophilic alanine racemase from Bacillus stearothermophilus even at 60 °C in the presence of pyridoxal 5′-phosphate (PLP), although the thermostability of the former enzyme is lower than that of the latter one [FEMS Microbial. Lett. 192 (2000) 169]. In order to improve the thermostability of the psychrophilic enzyme, two hydrophilic amino acid residues (Glu150 and Arg151) at a surface loop surrounding the active site of the enzyme were substituted with the corresponding residues (Val and Ala) in the B. stearothermophilus alanine racemase. The mutant enzyme (ER150,151VA) showed a higher thermostability, and a markedly lower K_m value for PLP, than the wild type one. In addition, the catalytic activities at low temperatures and kinetic parameters of the two enzymes indicated that the mutant enzyme was more psychrophilic than the wild type one. Thus, the psychrophilic alanine racemase was improved in both psychrophilicity and thermostability by the site-directed mutagenesis. The mutant enzyme may be useful for the production of stereospecifically deuterated NADH and various -amino acids.     

Improvement of the acid stability of Bacillus licheniformis alpha amylase by site-directed mutagenesis

The objective of this work was to improve the acid stability of alpha amylase from Bacillus licheniformis (BLA) under acidic conditions by site-directed mutagenesis. Based on the analysis of three dimensional structure of BLA, five histidine residues at positions 281, 289, 293, 316, and 327 in BLA were substituted by arginine residues and aspartic acid residues, respectively. Ten mutants H281R/D, H289R/D, H293R/D, H316R/D, and H327R/D were obtained and H293R, H316R, and H327R were active at pH 4.5 and 6.5. Triple mutations of BLA was modified for the construction of H293R/H316R/H327R. Compared with wild type, which lost the activity, H293R, H316R, H327R, and H293R/H316R/H327R could maintain 8, 10, 20, 31% of the initial activity when incubated at pH 4.5 and 70 °C for 40 min, respectively. The results combined with three-dimensional structure analysis demonstrated that H293R, H316R, H327R, and H293R/H316R/H327R showed an improved acid stability under low pH condition as a result of the interactions of electrostatic fields, hydrogen bonding, and hydrophilcity. This work provides the theoretical basis and background data on the improvement of acid stability in BLA for satisfying the industrial requirements by protein engineering, which is beneficial to molecular modification of other industrial enzymes for acid-tolerance ability.     

Analysis of acidic surface of Haloferax mediterranei glucose dehydrogenase by site-directed mutagenesis

Generally, halophilic enzymes present a characteristic amino acid composition, showing an increase in the content of acidic residues and a decrease in the content of basic residues, particularly lysines. The latter decrease appears to be responsible for a reduction in the proportion of solvent-exposed hydrophobic surface. This role was investigated by site-directed mutagenesis of glucose dehydrogenase from Haloferax mediterranei, in which surface aspartic residues were changed to lysine residues. From the biochemical analysis of the mutant proteins, it is concluded that the replacement of the aspartic residues by lysines results in slightly less halotolerant proteins, although they retain the same enzymatic activities and kinetic parameters compared to the wild type enzyme.     

Organic solvent tolerance and thermostability of a β-glucosidase co-engineered by random mutagenesis

Random mutagenesis was applied for development of organic solvent tolerant β-glucosidase I (BGLI) of Pichia etchellsii to extend its use for glyco-conjugate synthesis in non-aqueous medium. Previously cloned BGL1 encoding β-glucosidase I (BGLI) was subjected to error prone PCR and the mutant library was cloned in pPIC9 followed by transformation into Pichia pastoris. Transformants were first selected for functional β-glucosidase phenotype followed by screening for organic solvent tolerance in acetonitrile, dimethylformamide, dimethyl sulfoxide, methanol, 2-propanol. One of the enzyme variants, named, OT-BGLI exhibited 1.7- to 10-fold higher stability in 20–30% (v/v) methanol, 2-propanol, dimethylformamide compared to the wild type enzyme. This property was also accompanied by higher thermostability of the enzyme in aqueous buffer solution. Three of the six mutations (other 3 being silent) were mapped in the non-conserved regions of the gene. Modeled structure of the enzyme pin pointed increased hydrogen bonds, intra-ionic interactions (contributed by G414D and N789D replacements), facilitated proton exchange in organic solvents (contributed by Y722H) to be the causative agents for enhanced organic solvent stability and thermostability. Secondary structure of the mutant enzyme was similar to the wild type enzyme. Simultaneous enhanced organic solvent and thermal stability makes this enzyme an ideal candidate for glycoconjugate synthesis in aqueous-organic solvent systems.     

Preparation and characterization of maltosyl-sucrose isomers produced by transglycosylation of maltogenic amylase from Bacillus stearothermophilus

To develop a new transfer product of sucrose, sucrose was modified to maltosyl-sucrose using the transglycosylation activity of maltogenic amylase from Bacillus stearothermophilus (BSMA). The transglycosylation reaction was conducted with maltotriose and sucrose as the donor and acceptor, respectively. The presence of various sucrose transfer products was confirmed by thin layer chromatography (TLC) and high performance anion exchange chromatography (HPAEC). The sucrose transfer products were isolated by alkali-degradation followed by charcoal column chromatography using 20% (v/v) ethanol, then purified by ion exchange and Biogel P-2 gel permeation chromatographies. The structures of the major transfer products were determined to be 6^G--maltosyl-sucrose (maltosyl-sucrose 1) and 6^F--maltosyl-sucrose (maltosyl-sucrose 2) by LC-MS and ¹³C NMR. The mixture of maltosyl-sucrose 1 and 2 showed low sweetness, high hygroscopicity, low Maillard reactivity, and high acid and heat stability. Furthermore, it had an inhibitory effect on mutansucrase and water-insoluble glucan formation. These results indicated that the mixture of maltosyl-sucrose 1 and 2 is a suitable sugar substitute useful for various food products.     

Thermostable and alkalophilic maltogenic amylase of Bacillus thermoalkalophilus ET2 in monomer-dimer equilibrium

A gene encoding a thermostable and alkalophilic maltogenic amylase (BTMA) was cloned from the thermophilic bacterium Bacillus thermoalkalophilus ET2. BTMA was composed of 588 amino acids with a predicted molecular mass of 68.8 kDa. The enzyme had an optimal temperature and pH of 70°C and 8, respectively, the highest among maltogenic amylases reported so far. The Tm of BTMA at pH 8 was 76.7°C with an enthalpy of 113.6 kJ mol^-1. Both hydrolysis and transglycosylation activities for various carbohydrates were evident. β-Cyclodextrin (β-CD) and soluble starch were hydrolyzed mainly to maltose, and pullulan to panose. Acarbose, a strong amylase inhibitor, was hydrolyzed by BTMA to glucose and acarviosine-glucose. The K _m and k _cat values of BTMA for β-CD hydrolysis were 0.128 mM and 165.8 s^-1 mM, respectively. The overall catalytic efficiency (k _cat/K _m) of the enzyme was highest toward β-CD. BTMA was present in a monomer-dimer equilibrium with a molar ratio of 54:46 in 50 mM glycine-NaOH buffer (pH 8.0). This equilibrium could be affected by KCl and enzyme concentrations. The multi-substrate specificity of the enzyme was modulated by the structural differences between monomeric and dimeric forms. Starch was hydrolyzed more readily when monomeric BTMA was prevalent, while the opposite was observed for β-CD.     

K253R和N184V点突变对葡萄糖异构酶热稳定性的影响

用人工合成的寡核苷酸突变引物,以双引物法于重组Ｍ１３ｍｐ１９载体上进行定点突变,分别得到了葡萄糖异构酶的突变体ＧＩＫ２５３Ｒ和ＧＩＮ１８４Ｖ。测定它们的热稳定性,并将之与野生型酶比较,结果表明：（１）ＧＩＫ２５３Ｒ于７０℃、８０℃下的热稳定性小于野生型,但在７０℃、１ｍｏｌ／ＬＬ－鼠李糖中,两者的失活速度相近。另外;ＧＩＫ２５３Ｒ的比活是野生型的１．５倍。（２）ＧＩＮ１８４Ｖ的比活和热稳定性都远低于野生型,Ａｓｎ１８４为酶活性中心构象的维持所必需．本文还根据动力学数据和分子结构模型对以上结果作了初步分析．     

Improved cadaverine production from mutant Klebsiella oxytoca lysine decarboxylase

Cadaverine has the potential to become an important platform chemical for the production of nylon. Previously, a system that overexpresses the Klebsiella oxytoca lysine decarboxylase in Escherichia coli was engineered. The system was optimized by codon optimization, and tuning the expression level of the gene by testing various promoters and inducer concentrations. Here, we further improved the system by optimizing the sequence located in the region of the ribosome‐binding site in order to enhance translation efficiency. We also identified mutant lysine decarboxylase enzymes that demonstrated enhanced cadaverine‐production ability. Together, these modifications increased cadaverine production in the system by 50%, and the system has a yield of 80% from lysine‐HCl under the conditions we tested. This is the first time that a system to produce cadaverine using the lysine decarboxylase from K. oxytoca performed at a level that is competitive with the traditional systems using the E. coli lysine decarboxylases in both lab‐scale and batch fermentation conditions.     

定点突变三种方法的比较研究

目的：通过使用优化后的定点突变三种方法分别对一个新基因重组载体进行定点突变研究,比较这几种定点突变方法的优缺点。方法：重叠延伸PCR法使用Stratagene在线定点突变引物设计程序从而使引物设计简化而可靠;MutaBEST定点突变试剂盒采用胶纯化试剂盒代替说明书推荐的酚-氯仿抽提质粒的方法以提高回收率;使用PrimeSTAR高保真DNA聚合酶和超级感受态试剂盒代替Quikchange定点突变试剂盒的相应组分可使产物不受影响同时降低试验费用。结果：三种方法都能够获得单碱基突变重组载体。结论：QuikChange突变策略通过改进是一种高效、简洁、经济和可靠的定点突变方法。     

改进重叠延伸法引入DNA定点突变的新方法

目的：改进重叠延伸PCR法,实现一种引入DNA定点突变的准确简便方法。方法：通过应用不同的扩增酶和反应体系,以重叠延伸PCR的方法产生引入突变位点的DNA片断,然后再亚克隆到载体中。该文以人cyclin D1启动子的NF-κB位点（-39/-30）为例。结果：通过DNA测序证明定点突变成功引入。一次引入4个突变碱基。突变引入率为100%。