Vicinism and mass effect

Abstract. The term vicinism (neighbourship), first published in a phytosociological context by Nordhagen, refers to the occurrence of plant species in a less favourable environment -outside their sociological (ecological) amplitude — as a result of the continuous supply of propagules from neighbouring areas. In recent studies on this subject the term mass effect has been used for what seems to be the same phenomenon. This is unfortunate since this term was introduced much earlier to indicate the ability of plants which are able to grow in dense stands in order to change the local environment to the benefit of themselves — physically, chemically or mechanically- by developing a dense vegetation cover. Examples of this mass effect are mainly found in extreme environments such as salt marshes and lake shores. The occurrence of both vicinism and mass effect indicates that competition is not the only biological factor important in selection. Vicinism also contributes to connectivity, a major topic in landscape ecology. Both vicinism and connectivity as synecological concepts in their original meaning deserve more attention from ecologists.     

Sustainable Coastal Development: The Dual Mandate and a Recommendation for "Commerce Managed Areas"

Pitting the dynamicism and uncertainty inherent in undisturbed coastal ecosystems against the stability and predictability required of human‐dominated landscapes creates the paradox of the dual mandate. We describe a gradient of estuarine types ranging from systems that experience little human intrusion—conservation estuaries—to those that are dominated by people or extractive uses—production and urban‐industrial estuaries. Future approaches to managing these estuarine resources will require a division of the concept of marine protected areas into at least two subcategories: “conservation” managed areas (C_ConservationMAs) and “commerce” managed areas (C_CommerceMAs). The latter includes conditions where humans are not only a core feature of the landscape but also where extractive uses drive a large part of the local, regional, and even national economy. System reliability and predictability of ecosystem services are integral components of any management scheme in C_CommerceMAs. By recognizing this division managers can construct appropriate baselines that encompass the biodiversity and ecological integrity inherent in relatively undisturbed estuaries (or portions thereof), or the ecosystem health and system reliability that characterize urban‐industrial systems. The terms ecosystem restoration and ecosystem rehabilitation are also distinguished; the former term is used to describe practices that return ecosystems to optimum biological integrity, whereas the latter term is applied to the health of human‐dominated estuaries where the goal is to manage natural processes and functions. Our proposed approach does not mean that ecosystem quality is sacrificed in urban‐industrial or production systems; to the contrary, contaminant source control, suitable sediment and water quality, and the human endeavors to address them are just as important to sustaining commercial activity as they are to the well‐being of extant biota. So too, are the conservation and preservation of existing critical habitat (proximate reservoirs of biodiversity) in urban‐industrial systems, and rehabilitation of habitats that support species coadapted to the presence of humans.     

Local Mangrove Planting in the Philippines: Are Fisherfolk and Fishpond Owners Effective Restorationists?

Local fisherfolk and fishpond owners have been practicing “restoration” of mangrove forests in some parts of the Philippines for decades, well before governments and non‐government organizations began to promote the activity as a conservation tool. This paper examines ecological characteristics of these mangrove plantations and compares them to natural mangroves in the same areas. Mangrove planters were interviewed and plantation and natural mangrove forests were surveyed to measure forest structure, composition and regeneration. Compared with natural forests, mangrove plantations were characterized by high densities of small stems, shorter and narrower canopies, and fewer species. For both economic and ecological reasons, the vast majority of people dispersed and planted only Rhizophora mucronata/stylosa and, furthermore, they often thinned other species out of planted areas. There was remarkably little subsequent recruitment of other, nonplanted mangrove species into plantations up to 50 and 60 years of age. This pattern held across a diversity of sites, including plantations that had not been selectively cut or weeded. Important ecological and economic benefits result from local mangrove planting, but catalyzing diverse forest regeneration—at least in the short to medium term—is not one of them. The lesson: if you want to restore diverse mangrove forests, you have to plant diverse mangrove forests.     

Resolving the value of the dingo in ecological restoration

There is global interest in restoring populations of apex predators, both to conserve them and to harness their ecological services. In Australia, reintroduction of dingoes (Canis dingo) has been proposed to help restore degraded rangelands. This proposal is based on theories and the results of studies suggesting that dingoes can suppress populations of prey (especially medium‐ and large‐sized herbivores) and invasive predators such as red foxes (Vulpes vulpes) and feral cats (Felis catus) that prey on threatened native species. However, the idea of dingo reintroduction has met opposition, especially from scientists who query the dingo's positive effects for some species or in some environments. Here, we ask ‘what is a feasible experimental design for assessing the role of dingoes in ecological restoration?’ We outline and propose a dingo reintroduction experiment—one that draws upon the existing dingo‐proof fence—and identify an area suitable for this (Sturt National Park, western New South Wales). Although challenging, this initiative would test whether dingoes can help restore Australia's rangeland biodiversity, and potentially provide proof‐of‐concept for apex predator reintroductions globally.     

The Structure of the Individual Mental Lexicon from the Standpoint of L. S. Vygotsky's Ideas

Research on the structure of an individual's mental lexicon has shown that, among the set of concepts belonging to a single semantic field, there is typically one particular concept that stands out. The processes of storage, identification, and retrieval of this concept are faster and more successful than they are for the others. For example, in the vertical hierarchy of the concept fruit—apple—antonovka [McIntosh to give a familiar U. S. example—Trans.], apple plays this type of lead role and also occupies the most prominent position in the horizontal series apple—pear—plum—cherries—orange. Concepts with such characteristics are referred to as basic, source, or primary concepts. What is the reason for their special status?     

Ecological genetics of the cave beetle Neaphaenops tellkampfii (Coleoptera: Carabidae)

Summary Genetic variability and similarity were examined in eight populations of the Kentucky cave beetle Neaphaenops tellkampfii (Coleoptera: Carabidae) using the technique of polyacrylamide gel electrophoresis. Results indicate that N. tellkampfii has high genetic variation within and high genetic similarity among local populations. These results are in sharp contrast to the patterns of low variability and similarity reported for other cave dwelling species in the same region. It is concluded that the differences in genetical population structure among cave species in the Central Kentucky Karst are related to ecological differences among the species.     

Population genetics in the American tropics XVII. The biogeographical position and the sampling technique as parameters of genetic loads in Drosophila

Biogeographically central populations of Drosophila melanogaster sampled with widespread and multiple sweepings generated in lethal equivalences very low indexes of heterozygous mortality which obviously produced a high B/A ratio. On the other hand, local samples from limited restricted sweepings within 10 m in diameter in a marginal population of D. willistoni from the Macarena tropical rain forest have produced the highest indexes of heterozygous mortality and consequently a very low B/A ratio. Results reported here suggest that there are ecological constraints to the lethal-equivalence method, earlier proposed by Morton, Crow and Muller (1956, Proc. natn. Acad. Sci. U.S.A. 42: 855–863). Moreover, the authors recommend that the sampling method reflect the ecological characteristic of the species under consideration.The widespread sweeping-over-large-areas method of collecting Drosophila produces, in lethal-equivalent ratios, a degree of subvitality which must be interpreted as supporting the mutation-pressure theory. However, local sampling reveals loads compatible with the balancing-selection theory. The authors find that in their natural environments D. willistoni has a local genetical structure that supports the balancing-selection theory.     

Sulle Cause Determinanti La Formazione Di Tumori in Ibridi Di Nicotiana

Abstract

Cause of tumor formation in NICOTIANA hybrids. Further serological studies. — Additional researches have been carried out about genetical tumors in genus Nicotiana. By means of serological procedure the affinity among pairs of species that give rise to tumorous and non-tumorous hybrids has been tested, considering also their phyletic interrelation. Using ion exchange chromatography a qualitative analysis of the total proteins of tumorous and non-tumorous tissue of hybrids and of normal leaves taken from hybrids and their parental species was carried out. Serological analysis of affinity between the species tested gave following results:

1) higher serological affinity was found between species belonging to the same subgenus than between species belonging to different subgenera.

2) serological affinity between pairs of species giving rise to tumorous hybrids is higher than the affinity observed between other pairs of species that give rise to normal hybrids in spite of the same sistematic position. The same serological responses were obtained studying many species of Nicotiana with the single apparent exception of N. langsdorffii. The results of chromatographical analysis have revealed a high constancy of protein composition of the normal and tumorous tissue of hybrids. This conferms the genetical uniformity of the whole plant.     

Modeling and quantifying frequency‐dependent fitness in microbial populations with cross‐feeding interactions

Coexistence of two or more populations by frequency‐dependent selection is common in nature, and it often arises even in well‐mixed experiments with microbes. If ecology is to be incorporated into models of population genetics, then it is important to represent accurately the functional form of frequency‐dependent interactions. However, measuring this functional form is problematic for traditional fitness assays, which assume a constant fitness difference between competitors over the course of an assay. Here, we present a theoretical framework for measuring the functional form of frequency‐dependent fitness by accounting for changes in abundance and relative fitness during a competition assay. Using two examples of ecological coexistence that arose in a long‐term evolution experiment with Escherichia coli, we illustrate accurate quantification of the functional form of frequency‐dependent relative fitness. Using a Monod‐type model of growth dynamics, we show that two ecotypes in a typical cross‐feeding interaction—such as when one bacterial population uses a byproduct generated by another—yields relative fitness that is linear with relative frequency.     

Time matching between grooming partners: Do methodological distinctions between short versus long‐term reciprocation matter?

Primatologists have long focused on grooming exchanges to examine aspects of social relationships, co‐operation, and social cognition. One particular interest is the extent to which reciprocating grooming partners time match, and the time frame over which they do so. Conclusions about time matching vary across species. Generally, researchers focus on the duration of pauses between grooming episodes that involve a switch in partner roles and choose a cut‐off point to distinguish short from longer‐term reciprocation. Problematically, researchers have made inconsistent choices about cut‐offs. Such methodological variations are potentially concerning, as it is unclear whether inconsistent conclusions about short‐term time matching are attributable to species/ecological differences, or are due in part to methodological inconsistency. We ask whether various criteria for separating short versus long‐term reciprocation influence conclusions about short‐term time matching using data from free‐ranging rhesus ( Macaca mulatta) and captive‐crested macaques ( Macaca nigra). We compare several commonly used cut‐offs to ones generated by the currently preferred approach—survival analysis. Crested macaques displayed a mild degree of time matching regardless of the cutoff used. For rhesus macaques, whereas most cut‐offs yielded similar degrees of time matching as the one derived from survival analysis, very short ones significantly underestimated both the degree of time matching and the influence of rank distance on time matching. Although researchers may have some flexibility in their choice of cut‐offs, we suggest that they employ caution by using survival analysis when possible, and when not possible, by avoiding very short time windows.     

Three mechanisms of Red Queen dynamics

Models describing systems of coevolving populations often have asymptotically non-equilibrium dynamics (Red Queen dynamics (RQD)). We claim that if evolution is much slower than ecological changes, RQD arises due to either fast ecological processes, slow genetical processes, or to their interaction. The three corresponding generic types of RQD can be studied using singular perturbation theory and have very different properties and biological implications. We present simple examples of ecological, genetical, and ecogenetical RQD and describe how they may be recognized in natural populations. In particular, ecogenetical RQD often involve alternations of long epochs with radically different dynamics.     

When can noise induce chaos and why does it matter: a critique

Noise‐induced chaos illustrates how small amounts of exogenous noise can have disproportionate qualitative impacts on the long term dynamics of a nonlinear system. This property is particularly clear in chaotic systems but is also important for the majority of ecological systems which are nonchaotic, and has direct implications for analyzing ecological time series and testing models against field data. Dennis et al. point out that a definition of chaos which we advocated allows a noise‐dominated system to be classified as chaotic when its Lyapunov exponent λ is positive, which misses what is really going on. As a solution, they propose to eliminate the concept of noise‐induced chaos: chaos “should retain its strictly deterministic definition”, hence “ecological populations cannot be strictly chaotic”. Instead, they suggest that ecologists ask whether ecological systems are strongly influenced by “underlying skeletons with chaotic dynamics or whatever other dynamics”– the skeleton being the hypothetical system that would result if all external and internal noise sources were eliminated. We agree with Dennis et al. about the problem – noise‐dominated systems should not be called chaotic – but not the solution. Even when an estimated skeleton predicts a system's short term dynamics with extremely high accuracy, the skeleton's long term dynamics and attractor may be very different from those of the actual noisy system. Using theoretical models and empirical data on microtine rodent cycles and laboratory populations of Tribolium, we illustrate how data analyses focusing on attributes of the skeleton and its attractor – such as the “deterministic Lyapunov exponent”λ₀ that Dennis et al. have used as their primary indicator of chaos – will frequently give misleading results. In contrast, quantitative measures of the actual noisy system, such as λ, provide useful information for characterizing observed dynamics and for testing proposed mechanistic explanations.     

Mimetic butterflies and punctuated equilibria: some old light on a new paradigm*

The horns of a dilemma are usually on the same bull–Spanish proverb. A plague o' both your houses–Veronese imprecation. Although some hypotheses explain the world better than others, making ‘pluralism’ an untenable position, it is the case that scientists frequently set up as alternative hypotheses, one of which must be rejected, models which are merely compatible aspects of some other valid hypothesis that embraces them both. For example, Miillerian mimicry was once supposed to evolve either by a single large change or by gradual convergence (the assumption of gradualism is such that the second alternative has usually been regarded as correct). Yet our genetical research with Heliconius indicates that both processes take place, one after the other, when Miillerian mimicry evolves. A reconstruction of the most plausible route, through time and space, for the evolution of mimicry in Heliconius erato and H. melpomene is used to suggest that two currently popular controversies are similarly futile: the allopatric and parapatric models of race formation are considered to be the extremes of what in nature is a continuum of populations showing varying degrees of partial isolation (ecological change rather than stoppage of gene flow being the driving force in race formation); and it is shown that jerky evolution of the type now interpreted as evidence for ‘punctuated equilibria’ and ‘hopeful monsters’ can be produced by changes in the frequencies of major but ordinary gene mutations in response to changing ecological conditions, a phenomenon well accounted for in neo-Darwinian theory.     

ECOLOGICAL OPPORTUNITY AND THE RATE OF MORPHOLOGICAL EVOLUTION IN THE DIVERSIFICATION OF GREATER ANTILLEAN ANOLES

The pace of phenotypic diversification during adaptive radiation should decrease as ecological opportunity declines. We test this prediction using phylogenetic comparative analyses of a wide range of morphological traits in Greater Antillean Anolis lizards. We find that the rate of diversification along two important axes of Anolis radiation—body size and limb dimensions—decreased as opportunity declined, with opportunity quantified either as time elapsed in the radiation or as the diversity of competing anole lineages inferred to have been present on an island at different times in the past. Most previous studies of the ecological opportunity hypothesis have focused on the rate of species diversification; our results provide a complementary perspective, indicating that the rate of phenotypic diversification declines with decreasing opportunity in an adaptive radiation.     

Passive restoration in Araucaria Forest: useful ecological indicators in monitoring successional advancement in exotic tree plantation landscapes

Monitoring successional advancement is a complex field involving a constant search for applied ecological indicators which facilitate monitoring of secondary forests for both active and passive restoration. In this study, the authors investigate the successional advancement of floristics and tree structure within Araucaria Forest (AF) fragments under passive restoration in a context where exotic tree plantations (mainly Pinus L. genus) dominate the landscape. The ecological indicators used were floristic dissimilarity (β‐diversity inferences), indicator species, ecological groups of species, basal area, and species abundance distribution (SAD) models (α‐diversity inferences). A total of 182 tree species belonging to 91 genera and 43 botanical families were identified. A high β diversity was verified for which each site has indicator species (for the locations CD—Dicksonia sellowiana; CO—Cryptocarya aschersoniana; and PG—Pinus taeda), where pioneer species contributed to much of the abundance. Different SAD models are useful for describing passive restoration sites in exotic tree plantation landscapes, namely Lognormal, Mandelbrot, and Zipf. SAD models together with basal area, taxonomic group (e.g. Myrtaceae assemblage), and tree abundance in ecological groups are strategic ecological indicators for monitoring successional advancement in AF.     

Population genetical study of natural hybridization betweenPapio anubis andP. hamadryas

The natural hybridization betweenPapio anubis andP. hamadryas in central Ethiopia was studied from a population genetical perspective. Studies were made using electrophoretical blood protein variations as markers in order to clarify the genetic relationship between them. A total of 563 samples from ten populations which were collected in the field studies with a socioecologist in 1976 and 1979 were examined for 34 blood protein loci. Ten of the 34 loci showed polymorphism. The Tf, PA-2 and Es were found to be effective for discriminating between the anubis and hamadryas. Genetic variability, hybridization rate, genetic distance, migration rates and correlations between genetical and morphological and between genetical and behavioral indices were computed and analyzed. The results of the present genetic survey revealed that most of the populations from which the author collected blood samples were more or less hybridized. The Nei's (1975) genetic distance between the two species was estimated to be 0.0679 at most. As this value is too small to consider these species as real biological species, it is supposed that the natural hybrid zone is fairly wide and still expanding now. This work was supported in part by Grants in aid for scientific research (Overseas scientific research, 1975) and of the Overseas Special Research Programme of the Primate Research Institute, Kyoto University in 1978 by Ministry of Education, Science and Culture.     

Plant taxonomy and syntaxonomy: a comparative analysis

Modern botanical idiotaxonomy and syntaxonomy have both common and differing features. The common features are a pragmatic approach and an accent on conditional units, especially the species and the association. The differing features are in the nature of organismic and the coenotic levels of life. Taxonomy is based on a stronger genetical and phylogenetical relationship between taxa, which are thus not quite artifical and the scope of the species concept is roughly the same all over the world. The hierarchy in taxonomy reflects a phylogeny at least to some extent. The basis of syntaxonomy is entirely conventional owing to the continuous nature of vegetation. As a result, the scope of the association concept varies with different national schools, and the hierarchy in syntaxonomy is of a pragmatical, at best of an ecological nature.     

Divergent selection and drift shape the genomes of two avian sister species spanning a saline–freshwater ecotone

The role of species divergence due to ecologically based divergent selection—or ecological speciation—in generating and maintaining biodiversity is a central question in evolutionary biology. Comparison of the genomes of phylogenetically related taxa spanning a selective habitat gradient enables discovery of divergent signatures of selection and thereby provides valuable insight into the role of divergent ecological selection in speciation. Tidal marsh ecosystems provide tractable opportunities for studying organisms' adaptations to selective pressures that underlie ecological divergence. Sharp environmental gradients across the saline–freshwater ecotone within tidal marshes present extreme adaptive challenges to terrestrial vertebrates. Here, we sequence 20 whole genomes of two avian sister species endemic to tidal marshes—the saltmarsh sparrow (Ammospiza caudacutus) and Nelson's sparrow (A. nelsoni)—to evaluate the influence of selective and demographic processes in shaping genome‐wide patterns of divergence. Genome‐wide divergence between these two recently diverged sister species was notably high (genome‐wide F_ST = 0.32). Against a background of high genome‐wide divergence, regions of elevated divergence were widespread throughout the genome, as opposed to focused within islands of differentiation. These patterns may be the result of genetic drift resulting from past tidal march colonization events in conjunction with divergent selection to different environments. We identified several candidate genes that exhibited elevated divergence between saltmarsh and Nelson's sparrows, including genes linked to osmotic regulation, circadian rhythm, and plumage melanism—all putative candidates linked to adaptation to tidal marsh environments. These findings provide new insights into the roles of divergent selection and genetic drift in generating and maintaining biodiversity.