Reflections on 'plant neurobiology'

Plant neurobiology, a new and developing area in the plant sciences, is a meeting place for scientists concerned with exploring how plants perceive signs within their environment and convert them into internal electro-chemical ('plant neurobiological') signals. These signals, in turn, permit rapid modifications of physiology and development that help plants adjust to changes in their environment. The use of the epithet 'neurobiology' in the context of plant life has, however, led to misunderstanding about the aims, content, and scope of this topic. This difficulty is possibly due to the terminology used, since this is often unfamiliar in the context of plants. In the present article, the scope of plant neurobiology is explored and some of analogical and metaphorical aspects of the subject are discussed. One approach to reconciling possible problems of using the term 'plant neurobiology' and, at the same time, of analysing information transfer in plants and the developmental processes which are regulated thereby, is through Living Systems Theory (LST). This theory specifically directs attention to the means by which information is gathered and processed, and then dispersed throughout the hierarchy of organisational levels of the plant body. Attempts to identify the plant 'neural' structures point to the involvement of the vascular tissue - xylem and phloem - in conveying electrical impulses generated in zones of special sensitivity to receptive locations throughout the plant in response to mild stress. Vascular tissue therefore corresponds, at the level of organismic organisation, with the informational 'channel and net' subsystem of LST.     

Plant history and soil history jointly influence the selection environment for plant species in a long‐term grassland biodiversity experiment

Long‐term biodiversity experiments have shown increasing strengths of biodiversity effects on plant productivity over time. However, little is known about rapid evolutionary processes in response to plant community diversity, which could contribute to explaining the strengthening positive relationship. To address this issue, we performed a transplant experiment with offspring of seeds collected from four grass species in a 14‐year‐old biodiversity experiment (Jena Experiment). We used two‐ and six‐species communities and removed the vegetation of the study plots to exclude plant–plant interactions. In a reciprocal design, we transplanted five “home” phytometers (same origin and actual environment), five “away‐same” phytometers (same species richness of origin and actual environment, but different plant composition), and five “away‐different” phytometers (different species richness of origin and actual environment) of the same species in the study plots. In the establishment year, plants transplanted in home soil produced more shoots than plants in away soil indicating that plant populations at low and high diversity developed differently over time depending on their associated soil community and/or conditions. In the second year, offspring of individuals selected at high diversity generally had a higher performance (biomass production and fitness) than offspring of individuals selected at low diversity, regardless of the transplant environment. This suggests that plants at low and high diversity showed rapid evolutionary responses measurable in their phenotype. Our findings provide first empirical evidence that loss of productivity at low diversity is not only caused by changes in abiotic and biotic conditions but also that plants respond to this by a change in their micro‐evolution. Thus, we conclude that eco‐evolutionary feedbacks of plants at low and high diversity are critical to fully understand why the positive influence of diversity on plant productivity is strengthening through time.     

Vicinism and mass effect

Abstract. The term vicinism (neighbourship), first published in a phytosociological context by Nordhagen, refers to the occurrence of plant species in a less favourable environment -outside their sociological (ecological) amplitude — as a result of the continuous supply of propagules from neighbouring areas. In recent studies on this subject the term mass effect has been used for what seems to be the same phenomenon. This is unfortunate since this term was introduced much earlier to indicate the ability of plants which are able to grow in dense stands in order to change the local environment to the benefit of themselves — physically, chemically or mechanically- by developing a dense vegetation cover. Examples of this mass effect are mainly found in extreme environments such as salt marshes and lake shores. The occurrence of both vicinism and mass effect indicates that competition is not the only biological factor important in selection. Vicinism also contributes to connectivity, a major topic in landscape ecology. Both vicinism and connectivity as synecological concepts in their original meaning deserve more attention from ecologists.     

Plastic,inquisitive roots and intelligent plants in the light of some new vistas in plant biology

Abstract

Metaphors, such as those used in the title of this article, are often useful for the comprehension of specialised topics in plant biology. A brief attempt is made to elucidate one of these metaphors, plant “intelligence”, as it relates to the plastic responses of roots and root systems to their environment. Tropisms and nastic movements of root apices are two expressions of an inherent plasticity of form exhibited by roots. In soil, roots are exposed to multiple stimuli, many of which can potentially elicit such movements. Hence, a key question is how roots respond to and process the different stimuli which simultaneously reach their surfaces. Assuming that roots always use the same site along their length to express their movement responses, and that they also use an auxin‐based information‐transduction pathway, the most evident choices for the processing of stimuli are that roots either prioritise the various incoming stimuli and respond only to the strongest or they amalgamate stimuli and mount an averaged compromise response to all of them. The proposal that plants may be “intelligent”, especially in respect to their plastic growth responses, is one that draws upon knowledge of this faculty from animal biology. Also implied is that plants and animals are sufficiently similar to share usage of this term “intelligence”. But an alternative view is that plants and animals are sufficiently different and so intelligence is an unfitting term. Following the line of enquiry into creative evolution initiated by Henri Bergson, plants can be viewed differently to animals. The tendency of plants is towards instinctive behaviour rather than intelligent behaviour.     

PeroxiBase: a class III plant peroxidase database

Class III plant peroxidases (EC 1.11.1.7), which are encoded by multigenic families in land plants, are involved in several important physiological and developmental processes. Their varied functions are not yet clearly determined, but their characterization will certainly lead to a better understanding of plant growth, differentiation and interaction with the environment, and hence to many exciting applications. Since there is currently no central database for plant peroxidase sequences and many plant sequences are not deposited in the EMBL/GenBank/DDBJ repository or the UniProt KnowledgeBase, this prevents researchers from easily accessing all peroxidase sequences. Furthermore, gene expression data are poorly covered and annotations are inconsistent. In this rapidly moving field, there is a need for continual updating and correction of the peroxidase superfamily in plants. Moreover, consolidating information about peroxidases will allow for comparison of peroxidases between species and thus significantly help making correlations of function, structure or phylogeny. We report a new database (PeroxiBase) accessible through a web server with specific tools dedicated to facilitate query, classification and submission of peroxidase sequences. Recent developments in the field of plant peroxidase are also mentioned.     

Seasonality/aseasonality of aquatic macrophytes in Southern Hemisphere inland waters

The term aseasonality is used in this paper to describe environmental conditions which either lack annual seasonal change or have periodicities of change which are longer or shorter than the seasons. Environmental factors act on plants either as stresses or disturbances and changes in environment can signal the onset of conditions which are favourable or unfavourable to plant growth and reproduction. Plant life-histories are thus adapted to these environmental factors and respond to them with both seasonal and aseasonal periodicities, depending on their manner of occurrence and effect on the plants. A review of pertinent studies from the Southern Hemisphere shows that plants of the same life-form (submerged, floating, emergent) might differ in the types of adaptation and response to environmental conditions according to latitude but that the periodicity of response could be seasonal or aseasonal regardless of latitude. The concept of seasonality versus aseasonality is therefore misleading and an oversimplification of the variety of periodicities with which the environment acts on plant genotypes. Limnological principles of the Northern Hemisphere are applicable to aquatic macrophytes in the Southern Hemisphere but there is a particular need for research into the effects of biotic variables and water level fluctuations on aquatic plants and communities in the latter.     

How plants cope with biotic interactions

In their natural environment, plants interact with many different organisms. The nature of these interactions may range from positive, for example interactions with pollinators, to negative, such as interactions with pathogens and herbivores. In this special issue, the contributors provide several examples of how plants manage both positive and negative biotic interactions. This review aims to relate their findings to what we know about the complex natural environments in which plants have evolved. Molecular analyses of plant genomes and expression profiles have shown how intricately plants may regulate responses to single or multiple biotic interactions. Plant responses are fine-tuned by signalling hormone interactions. When multiple organisms interact with a single plant this may result in antagonistic or synergistic effects. The emerging fields of ecogenomics and metabolomics undoubtedly will refine our understanding of the multilayered regulation that plants use to manage relationships with their biotic environment. However, we can only understand why plants have such an intricate regulatory apparatus if we consider the ecological context of plant biotic interactions.     

Root proliferation and seed yield in response to spatial heterogeneity of below-ground competition

Here, we tested the predictions of a 'tragedy of the commons' model of below-ground plant competition in annual plants that experience spatial heterogeneity in their competitive environment. Under interplant competition, the model predicts that a plant should over-proliferate roots relative to what would maximize the collective yield of the plants. We predict that a plant will tailor its root proliferation to local patch conditions, restraining root production when alone and over-proliferating in the presence of other plants. A series of experiments were conducted using pairs of pea (Pisum sativum) plants occupying two or three pots in which the presence or absence of interplant root competition was varied while nutrient availability per plant was held constant. In two-pot experiments, competing plants produced more root mass and less pod mass per individual than plants grown in isolation. In three-pot experiments, peas modulated this response to conditions at the scale of individual pots. Root proliferation in the shared pot was higher compared with the exclusively occupied pot. Plants appear to display sophisticated nutrient foraging with outcomes that permit insights into interplant competition.     

Gene Expression and Regulation of Higher Plants Under Soil Water Stress

Higher plants not only provide human beings renewable food, building materials and energy, but also play the most important role in keeping a stable environment on earth. Plants differ from animals in many aspects, but the important is that plants are more easily influenced by environment than animals. Plants have a series of fine mechanisms for responding to environmental changes, which has been established during their long-period evolution and artificial domestication. The machinery related to molecular biology is the most important basis. The elucidation of it will extremely and purposefully promote the sustainable utilization of plant resources and make the best use of its current potential under different scales. This molecular mechanism at least includes drought signal recognition (input), signal transduction (many cascade biochemical reactions are involved in this process), signal output, signal responses and phenotype realization, which is a multi-dimension network system and contains many levels of gene expression and regulation. We will focus on the physiological and molecular adaptive machinery of plants under soil water stress and draw a possible blueprint for it. Meanwhile, the issues and perspectives are also discussed. We conclude that biological measures is the basic solution to solving various types of issues in relation to sustainable development and the plant measures is the eventual way.Key Words: Higher plants, soil water stress, gene regulatory network, drought, anti-drought gene resources, signal, ion homeostasis, physiological mechanisms.     

The botanical education extinction and the fall of plant awareness

Civilization is dependent upon plants for survival. Plants permeate our every moment and our relationship with them will dictate how we will manage the threats of climate change and ecological collapse defining the Anthropocene. Yet, despite the significance of plants and the critical role they have played in shaping ecosystems, civilizations, and human cultures, many people are now disconnected from the botanical world. Students are presented with little plant content, particularly identification, compared with animal content. Consequently, we are producing few plant scientists and educating fewer scientists about plants. This drives a self‐accelerating cycle we term the extinction of botanical education. A process of knowledge erosion, that in this instance contributes to our separation from the natural world, makes us blind to the biodiversity crisis and inhibits our ability to restore it. We argue that neglecting the importance of plants within education threatens the foundations of industries and professions that rely on this knowledge. Furthermore, this extinction of botanical education creates an existential threat: Without the skills to fully comprehend the scale of and solutions to human‐induced global change, how do we as a society combat it? We present key research agendas that will enable us to reverse the extinction of botanical education and highlight the critical role plants play on the global stage.

Civilization is dependent upon plants for survival and our relationship with them will dictate how we will manage the global impact of humanity which defines the Anthropocene. We document and define a self‐perpetuating educational cycle that we term the extinction of botanical education and its impact on the science of botany and potential ramifications for society to reverse and stabilise human included global change.     

Ethyl Methanesulfonate as Inductor of Somaclonal Variants in Different Crops

Ethyl methanesulfonate is a chemical mutagen, which is currently being used in plant breeding, to increase genetic variability in genes of agronomic interest, of species useful in agriculture. It primarily causes single base point mutations by inducing guanine alkylation, resulting in GC to AT transitions. Its effect is different between clones of a genotype and between genotypes of the same species. This review presents the results obtained in recent research, where its effect on plant tissues, callus, and cells in suspension has been evaluated. Changes in the phenotypic expression of somaclonal variants were reported, involving morphology, production of secondary metabolites, changes in metabolic routes of resistance, tolerance to stress, increased seed yield, among others. In addition, this review compiles the doses and guidelines to consider before using this mutagen, which can serve as a guide for future trials in deciding the response variables, the type of plant explants and the selection of the study model. Mutant lines have allowed plant breeders to have a collection of plants with different characteristics, in places where the cultivar does not have its center of origin. It is important to note that it is still necessary to continue evaluating the heritability of mutations and their behaviour in the environment where they will be established, in order to obtain new varieties of plants that can be cultivated with uniformity in their genetic response.     

干旱胁迫植物个体生理响应及其生态模型预测研究进展

全球气候突变导致干旱事件频发,进而易引发严重的植物衰退甚至死亡,聚焦植物尤其是树木死亡的生理学机制并期望基于此评估及预测气候变化导致植物死亡风险已成为热点话题。植物通过调整内在生理代谢过程,例如通过调节渗透物质的含量,来平衡渗透势、维持细胞膨压、调节植物激素的信号水平,诱导植物气孔开放程度降低,有利于植物保存水分、调控植物水通道蛋白的表达,进而保持体内水分稳定并对干旱胁迫做出快速响应。这些生理过程中的每一环调节都为了确保水分运输的效率和安全性,增加植物抗旱性以及生态系统稳定性。植物的抗旱性不仅体现在生理代谢方面的调节,还表现在植物水力特性与解剖结构间相辅相成。当植物改变水力特性的同时,其茎叶会在解剖结构上做出调整以满足植物在干旱环境下水分供需平衡,从而降低植物蒸腾水分散失、增强细胞储水并提高生存能力。植物应对水分胁迫的策略通常与水分消耗和碳获取之间的平衡有关,明晰植物水分消耗与光合碳获取间存在平衡关系的性状特征便于更好地理解植物的水分利用策略。然而,植物表现出的任意单一性状特征的强弱都无法代表整个植物适应逆境的优劣,未来只有通过将植物更多性状特征进行相互关联,以具有代表植物水力功能、结...     

Silicon: its manifold roles in plants

The title of this essay declares that silicon does have roles in plants and all participants in this conference know that that is so. This knowledge, however, is not shared by the general community of plant biologists, who largely ignore the element. This baffling contrast is based on two sets of experience. First, higher plants can grow to maturity in nutrient solutions formulated without silicon. That has led to the conventional wisdom that silicon is not an essential element, or nutrient, and thus can be disregarded. Second, the world's plants do not grow in the benign environment of solution culture in plant biological research establishments. They grow in the field, under conditions that are often anything but benign. It is there, in the real world with its manifold stressful features, that the silicon status of plants can make a huge difference in their performance. The stresses that silicon alleviates range all the way from biotic, including diseases and pests, to abiotic such as gravity and metal toxicities. Silicon performs its functions in two ways: by the polymerization of silicic acid leading to the formation of solid amorphous, hydrated silica, and by being instrumental in the formation of organic defence compounds through alteration of gene expression. The silicon nutrition of plants is not only scientifically intriguing but also important in a world where more food will have to be wrung from a finite area of land, for that will put crops under stress.     

Changes in high arctic tundra plant reproduction in response to long‐term experimental warming

We provide new information on changes in tundra plant sexual reproduction in response to long‐term (12 years) experimental warming in the High Arctic. Open‐top chambers (OTCs) were used to increase growing season temperatures by 1–2 °C across a range of vascular plant communities. The warming enhanced reproductive effort and success in most species; shrubs and graminoids appeared to be more responsive than forbs. We found that the measured effects of warming on sexual reproduction were more consistently positive and to a greater degree in polar oasis compared with polar semidesert vascular plant communities. Our findings support predictions that long‐term warming in the High Arctic will likely enhance sexual reproduction in tundra plants, which could lead to an increase in plant cover. Greater abundance of vegetation has implications for primary consumers – via increased forage availability, and the global carbon budget – as a function of changes in permafrost and vegetation acting as a carbon sink. Enhanced sexual reproduction in Arctic vascular plants may lead to increased genetic variability of offspring, and consequently improved chances of survival in a changing environment. Our findings also indicate that with future warming, polar oases may play an important role as a seed source to the surrounding polar desert landscape.     

Bryophytes as experimental models for the study of environmental stress tolerance: Tortula ruralis and desiccation-tolerance in mosses

The development of a complete understanding of how plants interact with the environment at the cellular level is a crucial step in advancing our ability to unravel the complexities of plant ecology particularly with regard to the role that many of the less complex plants (i.e., algae, lichens, and bryophytes) play in plant communities and in establishing areas for colonization by their more complex brothers. One of the main barriers to the advancement of this area of plant biology has been the paucity of simple and appropriate experimental models that would enable the researcher to biochemically and genetically dissect the response of less complex plants to environmental stress. A number of bryophytes model systems have been developed and they have been powerful experimental tools for the elucidation of complex biological processes in plants. Recently there has been a resurgent interest in bryophytes as models systems due to the discovery and development of homologous recombination technologies in the moss Physcomitrella patens (Hedw.) Brach & Schimp. In this report we introduce the desiccation-tolerant moss Tortula ruralis (Hedw.) Gaert., Meyer, and Scherb, as a model for stress tolerance mechanisms that offers a great deal of promise for advancing our efforts to understand how plants respond to and survive the severest of stressful environments. T. ruralis, a species native to Northern and Western North America, has been the most intensely studied of all bryophytes with respect to its physiological, biochemical, and cellular responses, to the severest of water stresses, desiccation. It is our hope that the research conducted using this bryophyte will lay the foundationfor not only the ecology of bryophytes and other less complex plants but also for the role of desiccation-tolerance in the evolution of land plants and the determination of mechanisms by which plant cells can withstand environmental insults. We will focus the discussion on the research we and others have conducted in an effort to understand the ability of T. ruralis to withstand the complete loss of free water from the protoplasm of its cells.     

Climate change and invasion by intracontinental range-expanding exotic plants: the role of biotic interactions

Background and Aims

In this Botanical Briefing we describe how the interactions between plants and their biotic environment can change during range-expansion within a continent and how this may influence plant invasiveness.

Scope

We address how mechanisms explaining intercontinental plant invasions by exotics (such as release from enemies) may also apply to climate-warming-induced range-expanding exotics within the same continent. We focus on above-ground and below-ground interactions of plants, enemies and symbionts, on plant defences, and on nutrient cycling.

Conclusions

Range-expansion by plants may result in above-ground and below-ground enemy release. This enemy release can be due to the higher dispersal capacity of plants than of natural enemies. Moreover, lower-latitudinal plants can have higher defence levels than plants from temperate regions, making them better defended against herbivory. In a world that contains fewer enemies, exotic plants will experience less selection pressure to maintain high levels of defensive secondary metabolites. Range-expanders potentially affect ecosystem processes, such as nutrient cycling. These features are quite comparable with what is known of intercontinental invasive exotic plants. However, intracontinental range-expanding plants will have ongoing gene-flow between the newly established populations and the populations in the native range. This is a major difference from intercontinental invasive exotic plants, which become more severely disconnected from their source populations.     

Oxidant and antioxidant signalling in plants: a re-evaluation of the concept of oxidative stress in a physiological context

While the chemical nature of reactive oxygen species (ROS) dictates that they are potentially harmful to cells, recent genetic evidence suggests that in planta purely physicochemical damage may be much more limited than previously thought. The most potentially deleterious effect of ROS under most conditions is that at high concentrations they trigger genetically programmed cell suicide events. Moreover, because plants use ROS as second messengers in signal transduction cascades in processes as diverse as mitosis, tropisms and cell death, their accumulation is crucial to plant development as well as defence. Direct ROS signal transduction will ensue only if ROS escape destruction by antioxidants or are otherwise consumed in a ROS cascade. Thus, the major low molecular weight antioxidants determine the specificity of the signal. They are also themselves signal-transducing molecules that can either signal independently or further transmit ROS signals. The moment has come to re-evaluate the concept of oxidative stress. In contrast to this pejorative or negative term, implying a state to be avoided, we propose that the syndrome would be more usefully described as 'oxidative signalling', that is, an important and critical function associated with the mechanisms by which plant cells sense the environment and make appropriate adjustments to gene expression, metabolism and physiology.     

Effects of host plant on life‐history traits in the polyphagous spider mite Tetranychus urticae

Studying antagonistic coevolution between host plants and herbivores is particularly relevant for polyphagous species that can experience a great diversity of host plants with a large range of defenses. Here, we performed experimental evolution with the polyphagous spider mite Tetranychus urticae to detect how mites can exploit host plants. We thus compared on a same host the performance of replicated populations from an ancestral one reared for hundreds of generations on cucumber plants that were shifted to either tomato or cucumber plants. We controlled for maternal effects by rearing females from all replicated populations on either tomato or cucumber leaves, crossing this factor with the host plant in a factorial design. About 24 generations after the host shift and for all individual mites, we measured the following fitness components on tomato leaf fragments: survival at all stages, acceptance of the host plant by juvenile and adult mites, longevity, and female fecundity. The host plant on which mite populations had evolved did not affect the performance of the mites, but only affected their sex ratio. Females that lived on tomato plants for circa 24 generations produced a higher proportion of daughters than did females that lived on cucumber plants. In contrast, maternal effects influenced juvenile survival, acceptance of the host plant by adult mites and female fecundity. Independently of the host plant species on which their population had evolved, females reared on the tomato maternal environment produced offspring that survived better on tomato as juveniles, but accepted less this host plant as adults and had a lower fecundity than did females reared on the cucumber maternal environment. We also found that temporal blocks affected mite dispersal and both female longevity and fecundity. Taken together, our results show that the host plant species can affect critical parameters of population dynamics, and most importantly that maternal and environmental conditions can facilitate colonization and exploitation of a novel host in the polyphagous T. urticae, by affecting dispersal behavior (host acceptance) and female fecundity.     

Import of palaeoethnobotanical facts

By the year 2000, palaeoethnobotany will have been functional as an integral part of archaeology for somewhat less than 100 yr. Initially admired for the longevity of their persistence, archaeological plant remains gradually came to be an indication of the diet of prehistoric people. In some species, the archaeological plant remains also indicate the developmental history of the cultivated plant. For others, no wild ancestor is known or revealed by the archaeological plant remains. As greater knowledge is assembled of the plants useful for man, patterns of prehistoric distribution are revealed. The more exact location of the area of origin of cultivated species will become increasingly important to a population faced with chronic food shortages as this will guide botanists to ancestral species and their close relatives. From this reservoir will come desirable plant attributes that can be bred into high-yielding, but genetically depauperate strains of crop plants. The predicted scarcity of petroleum about the year 2000 will lead to high cost or lack of petrochemicals whose use may be substituted for by disease and insect-resistant strains found in the area of a crop’s origin. That area may also offer biological controls, which will offset the lack of insecticides and fungicides. Although it is unlikely that early man overlooked useful plants that might be brought into cultivation, areas of diversity of crop plants are also prime areas to be investigated for new crop plants.     

Chromosome engineering: power tools for plant genetics

The term "chromosome engineering" describes technologies in which chromosomes are manipulated to change their mode of genetic inheritance. This review examines recent innovations in chromosome engineering that promise to greatly increase the efficiency of plant breeding. Haploid Arabidopsis thaliana have been produced by altering the kinetochore protein CENH3, yielding instant homozygous lines. Haploid production will facilitate reverse breeding, a method that downregulates recombination to ensure progeny contain intact parental chromosomes. Another chromosome engineering success is the conversion of meiosis into mitosis, which produces diploid gametes that are clones of the parent plant. This is a key step in apomixis (asexual reproduction through seeds) and could help to preserve hybrid vigor in the future. New homologous recombination methods in plants will potentiate many chromosome engineering applications.