Latitudinal, habitat and substrate distribution patterns of freshwater ascomycetes in the Florida Peninsula

Freshwater ascomycetes are important decomposers of dead woody and herbaceous debris in aquatic habitats. Despite evidence of their ecological importance, latitudinal, habitat and substrate distributional patterns of freshwater ascomycetes are poorly understood. In this study, we examined the latitudinal and habitat distributional patterns, and substrate recurrences of freshwater ascomycetes by collecting dead submerged woody and herbaceous debris in lentic and lotic habitats at five selected sites along a north-central-south, temperate–subtropical latitudinal ecotone in Florida. One hundred and thirty-two fungal taxa were collected during the study. Seventy-four were meiosporic and 56 were mitosporic ascomycetes, while two species were basidiomycetes. Canonical analyses of principal coordinates (CAP) and Sørenson’s similarity index of species based on presence/absence data revealed a high turnover in species composition between the northern and southern sites, indicating a change in species composition along the temperate–subtropical latitudinal ecotone of the Florida Peninsula. Results from the ordination analysis indicated that freshwater ascomycete community composition is not significantly different between lentic and lotic habitats in Florida. The geographically broadly distributed species and species commonly found in Florida occurred in both habitats, whereas a number of new or rare species occurred in either lentic or lotic habitats, but not both. The same freshwater ascomycete species did not necessarily occur on both woody and herbaceous debris; of the 132 taxa collected, 100 were reported only on woody debris; 14 species occurred exclusively on herbaceous debris; and 18 species were found on both woody and herbaceous debris in lentic or lotic habitats. Implications of data from this study to the conservation and knowledge of biodiversity for freshwater ascomycetes is discussed.     

Classification of macroinvertebrate communities across drainage basins in Victoria, Australia: consequences of sampling on a broad spatial scale for predictive modelling

1. Spatial scale may influence the interpretation of environmental gradients that underlie classification and ordination analyses of lotic macroinvertebrate communities. This could have important consequences for the spatial scale over which predictive models derived from these multivariate analyses can be applied. 2. Macroinvertebrate community data (identified to genus or species) from edge and main-channel habitats were obtained for sites on rivers from 25 of the 29 drainage basins in Victoria. Trends in community similarity were analysed by carrying out separate multivariate analyses on data from the edge habitats (199 sites) and the main-channel habitats (163 sites). 3. Hierarchical classification (UPGMA) showed that the edge data could be placed into 11 site groups and the main-channel data into 12 site groups. 4. Ordination analysis (hybrid multidimensional scaling) showed no sharp disjunctions between site groups in either habitat; overlap was frequent. Correlation of the ordination patterns with environmental variables showed that edge communities varied longitudinally within a drainage basin and from the east to the west of Victoria. These two trends were superimposed on one another to form a single gradient on the ordination. The taxon richness of edge communities was also related to the species richness of macrophytes at a site. Main-channel communities also displayed a longitudinal and a geographic gradient, but these two gradients were uncorrelated on the ordination. 5. Community similarity only weakly reflected geographic proximity in either habitat. A preliminary subdivision of Victoria into a series of biogeographic regions did not match the pattern of distribution of site groups for the edge habitat, illustrating the difficulties of applying to lotic communities a priori regionalizations based on terrestrial features of the landscape. 6. The longitudinal gradients in the two data sets were commonly observed in data gathered at smaller spatial scales in Victoria. The other gradients (geographic, macrophyte), however, were either not consistently repeated or not evident at smaller spatial scales. At small spatial scales (i.e. within a single drainage basin) gradients were related to variables that varied over restricted ranges, e.g. mean particle size of the substratum. 7. Species richness was very variable when plotted against river slope or distance of site from source; both of these are measures of position on the longitudinal gradients. In contrast to suggestions in the literature, species richness did not show a unimodal trend on these gradients, or any other trend. 8. Environmental gradients (apart from longitudinal gradients) that underlie predictive models of macroinvertebrate distribution are reflections of the spatial scale on which the model has been constructed and cannot be extrapolated to different scales. Models must be suited to the spatial scale over which predictions are required.     

长白山北坡土壤动物群落物种共有度的海拔梯度变化

群落间各生活型土壤动物科及所有土壤动物科的共有度,一定程度上反映了群落间的相关性及沿环境梯度的物种替代关系。应用梯度格局法在长白山北坡海拔550～2650m地段,每隔100m海拔高度设置一块样地,共计22块样地,并应用Jaccard指数,对各海拔不同土壤动物群落间物种共有度的海拔梯度变化进行了分析。结果表明,不同海拔土壤动物群落间物种的共有度,无论以哪一生活层的土壤动物科来表达,基本都以与其最相邻的群落间为最高,群落间物种共有度峰值与谷点反映了群落类型随海拔具有间断性变化。线虫、甲螨、弹尾等各生活型土壤动物的共有度以及所有土壤动物科的共有度,均随着海拔差的增加呈下降趋势,但并非与植被情况完全吻合。     

Complex relationships between species niches and environmental heterogeneity affect species co-occurrence patterns in modelled and real communities

Species co-occurrence analysis is commonly used to assess how interspecific interactions dictate community assembly. Non-random co-occurrences, however, may also emerge from niche differences as well as environmental heterogeneity. The relationships between species co-occurrence patterns, environmental heterogeneity and species niches are not fully understood, due to complex interactions among them. To analyse the relationships among these patterns and processes, I developed synthetic community models and analysed a large dataset of tree species across the conterminous United States. Niche overlap and environmental heterogeneity had significant and contrasting effects on species co-occurrence patterns, in both modelled and real communities. Niche breadth, in turn, affected the effect sizes of both variables on species co-occurrence patterns. The effect of niche breadth on the relationship between co-occurrence and niche overlap was markedly consistent between modelled and real communities, while its effect on the relationship between co-occurrence and environmental heterogeneity was mostly consistent between real and modelled data. The results of this analysis highlight the complex and interactive effects of species niche overlap, niche breadth and environmental heterogeneity on species co-occurrence patterns. Therefore, inferring ecological processes from co-occurrence patterns without accounting for these fundamental characteristics of species and environments may lead to biased conclusions.     

Pollution and tidal benthic communities of the James River Estuary,Virginia

Distribution of benthic communities in the estuarine portion of the James River was controlled mainly by salinity. Pollution effects were localized and difficult to assess because of a rigorous physical environment. Mesohaline and oligohaline communities were very similar to those in other estuaries of the eastern United States. Macrobenthic densities were most severely depressed in tidal freshwater habitats near Richmond & Hopewell, where the major portion of the pollution load enters the river. Cluster analysis of species distributional patterns and ordination of pollution and physical parameters produced similar results, dividing the river into mesohaline, oligohaline, and upper and lower tidal freshwater zones. Further analysis of only the tidal freshwater portion indicated the distribution of benthic communities reflected the location and concentration of pollution sources along the river. Tidal freshwater communities were dominated by the Asiatic clam, Corbicula fluminea, tubificid oligochaetes of the genus Limnodrilus and the chironomid insect larva Coelotanypus scapularis. The fauna of the freshwater zones was very eurytopic with respect to sediment type and has a great resemblance to the fauna of eutrophic lakes. The classical concept of a sharp increase in number of species occurring from oligohaline to freshwater zones was found to be misleading. This increase does not occur until free flowing (or lotic) freshwater areas of greater habitat diversity are reached.     

Habitat variation in species composition of flea assemblages on small mammals in central Europe

We studied patterns of variation in species composition of flea assemblages on small mammals across different habitats of Slovakia and compared flea species composition within and across host species among habitats. We asked (1) how variable the composition of flea assemblages is among different populations of the same host occurring in different habitats and (2) whether the composition of flea assemblages in a habitat is affected either by species composition of hosts or by environmental affinities of this habitat. Between-habitat similarity in flea species composition increased with an increase in the similarity in host species composition. Species richness of flea assemblages of a host species correlated positively with mean number of cohabitating host species but not with the number of habitats occupied by a host species. Results of the ordination of flea collections from each individual host demonstrated that the first five principal components explained most of the variance in species composition of flea assemblages. The segregation between rodent and insectivore flea assemblages was easily discerned from the ordination diagram when flea assemblages were plotted according to their hosts. When flea assemblages were plotted according to their habitat affinities, the distinction of habitats based on variation in flea composition was not as clear. The results of ANOVA of each principal component showed the significant effect of both host species and habitat type. The variation in each principal component was explained better by the factor of host species compared with the factor of habitat type. Multidimensional scaling of flea assemblages within host species across habitats demonstrated that among-habitat variation in flea composition was manifested differently in different hosts.     

Co-occurrence of ectoparasites on rodent hosts: null model analyses of data from three continents

We studied patterns of species co-occurrence in communities of ectoparasitic arthropods (ixodid ticks, mesostigmate mites and fleas) harboured by rodent hosts from South Africa ( Rhabdomys pumilio ), South America ( Scapteromys aquaticus and Oxymycterus rufus ) and west Siberia ( Apodemus agrarius , Microtus gregalis , Microtus oeconomus and Myodes rutilus ) using null models. We compared frequencies of co-occurrences of parasite species or higher taxa across host individuals with those expected by chance. When non-randomness of parasite co-occurrences was detected, positive but not negative co-occurrences of parasite species or higher taxa prevailed (except for a single sample of mesostigmate mites from O. rufus ). Frequency of detection of non-randomness of parasite co-occurrences differed among parasite taxa, being higher in fleas and lower in mites and ticks. This frequency differed also among host species independent of parasite taxon, being highest in Microtus species and lowest in O. rufus and S. aquaticus . We concluded that the pattern of species co-occurrence in ectoparasite communities on rodent hosts is predominantly positive, depends on life history of parasites and may be affected to a great extent by life history of a host.     

Forb diversity and community similarity of kopjes in the Serengeti National Park, Tanzania

The forb communities of kopjes (rock outcrops) in the Simba, Maasai and Loliondo areas of the Serengeti National Park were examined to determine differences in species composition from surrounding grassland communities, and among sites within kopje and grassland communities. Species diversity measures and multivariate ordination techniques were used to examine the community similarity and species turnover between sites. All measures of forb species diversity were higher on the kopje sites with the exception of one grassland site, and the community composition significantly differed between these two habitat types, with more species and families exclusive to the kopje habitat. Species turnover was very high in grassland habitats, with two of the three areas (Simba and Loliondo) exhibiting a complete change in species composition. Kopjes, on the other hand, had remarkably similar forb communities, suggesting that the populations of the species present on these rock outcrops form patch structures. The distinct flora and higher diversity of kopje forbs raise interesting questions regarding distribution, dispersal and patch dynamics.     

Aquatic vegetation of the Orinoco River Delta (Venezuela). An overview

The Orinoco River Delta is a complex of relatively unknown ecosystems made up of aquatic and semiaquatic habitats. The region includes a Mariusa National Park and the Orinoco Delta River Biosphere Reserve. The 23 sites studied included lentic habitats (lagoons and creeks) and lotic habitats (streams of variable breadth and current) which varied range from black to white waters. A collection of aquatic vascular plants was made and the physical and chemical variables were measured. A total of 100 species were identified, 48% of which are new records for the Delta territory. A Canonical Correspondence Analysis divided the species and communities into two groups: The lentic habitats of lakes and lagoons, which show a greater species richness and the lotic habitats of the main river courses. This study forms part of an ongoing research project on the floristic and abiotic characteristics of the aquatic communities in the Orinoco River Delta.     

Latitudinal variation of diversity in European freshwater animals is not concordant across habitat types

Aim   We analysed the variation of species richness in the European freshwater fauna across latitude. In particular, we compared latitudinal patterns in species richness and β-diversity among species adapted to different habitat types.
Location   Europe.
Methods   We compiled data on occurrence for 14,020 animal species across 25 pre-defined biogeographical regions of European freshwaters from the Limnofauna Europaea . Furthermore, we extracted information on the habitat preferences of species. We assigned species to three habitat types: species adapted to groundwater, lotic (running water) and lentic (standing water) habitats. We analysed latitudinal patterns of species richness, the proportion of lentic species and β-diversity.
Results   Only lentic species showed a significant species–area relationship. We found a monotonic decline of species richness with latitude for groundwater and lotic habitats, but a hump-shaped relationship for lentic habitats. The proportion of lentic species increased from southern to northern latitudes. β-Diversity declined from groundwater to lentic habitats and from southern to northern latitudes.
Main conclusions   The differences in the latitudinal variation of species richness among species adapted to different habitat types are in part due to differences in the propensity for dispersal. Since lentic habitats are less persistent than lotic or groundwater habitats, lentic species evolved more efficient strategies for dispersal. The dispersal propensity of lentic species facilitated the recolonization of central Europe after the last glaciation. Overall, we stress the importance of considering the history of regions and lineages as well as the ecological traits of species for understanding patterns of biodiversity.     

Diurnal foraging ant–tree co-occurrence networks are similar between canopy and understorey in a Neotropical rain forest

Discussion of the vertical stratification of organisms in tropical forests has traditionally focused on species distribution. Most studies have shown that, due to differences in abiotic conditions and resource distribution, species can be distributed along the vertical gradient according to their ecophysiological needs. However, the network structure between distinct vertical strata remains little-explored. To fill this gap in knowledge, we used baits to sample ants in the canopy and understorey trees of a Mexican tropical rain forest to record the ant–tree co-occurrences. We examined the ant–tree co-occurrences in the canopy and understorey using complementary network metrics (i.e., specialization, interaction diversity, modularity, and nestedness). In addition, we evaluated co-occurrence patterns between ant species on trees, using C-score analysis. In general, we found no differences in the network structure, although the interaction diversity was greater in the understorey than in the canopy networks. We also observed that co-occurrence networks of each vertical stratum featured four ant species in the central core of highly co-occurring species, with three species unique to each stratum. Moreover, we found a similar trend toward ant species segregation in the both strata. These findings reveal a similar pattern of ant–ant co-occurrences in both vertical strata, probably due to the presence of arboreal-nesting ants in the understorey. Overall, we showed that despite the marked differences in species composition and environmental conditions between understorey and canopy strata, ant–tree co-occurrences in these habitats could be governed by similar mechanisms, related to dominance and resource monopolization by ants.     

The ecology of two intermittent streams in Victoria, Australia

1. We compared aquatic macroinvertebrate assemblage composition within and between habitats (pools and riffles) at four sites on two intermittent streams in Victoria, Australia during a drought year followed by a wetter year to see how different spatial and temporal scales influenced patterns of community structure detected by multivariate techniques of ordination and classification. We also examined the fit between faunal groups and ‘flow phases’ characterized by multivariate analyses of physicochemical variables in an earlier paper. 2. Pools contained more taxa and individuals than riffles. At the more temporary site, there was considerable overlap between the faunal composition of pools and riffles, whereas habitat-specific assemblages consistently occurred at the more permanent sites. Most taxa were either tolerant, permanent stream forms able to persist in streams that dry briefly, or facultative species that occur in lotic or lentic habitats. Few species appeared specifically adapted to temporary waters. 3. Within habitats, there were some matches between faunal groups and flow phases, especially with the onset of the ‘diminishing flow’ phase, characterized by rising water temperature and conductivity, and declining pH and dissolved oxygen. However, disjunctions among faunal groups were less marked than those between flow phases, and were absent at an intermediate scale when habitats were pooled within sites. At the broadest scale of analysis (within habitats between sites and years), historical events (e.g. whether pools upstream dried completely during the previous summer) apparently influenced community composition as much as site-specific abiotic differences.     

Co-occurrence patterns among Australian centropagid copepods

Summary Data sets from existing limnological surveys carried out on Australian zooplankton communities are examined, and co-occurrences of species in the centropagid copepod genera Boeckella and Calamoecia are tabulated. One experiment to determine the extent of mating errors among four species of Boeckella is performed. The data are examined with respect to the hypotheses that mating errors of similar sized copepods preclude co-occurrence and that competition for resources by similar size species preclude occurrence. It is concluded that neither hypothesis is valid, instead, that co-occurrence patterns among these Australian centropagids are a function of dispersal and colonization ability, and that zooplankton species composition in Australian lakes and ponds is probably in a state of disequilibrium.     

Community structure and positive interactions in constraining environments

Spatial patterns in plant communities are thought to be controlled by the interplay of species interactions and environmental constraints. To evaluate the role of plant–plant interactions in shaping these communities we quantified species co-occurrence and interaction in seven environmentally distinct communities. These included four different semiarid habitats in southeast Spain, one alpine system in the Sierra Nevada range (Spain), and two sites in Venezuela, a secondary savanna near Caracas (Altos de Pipe), and a sclerophyllous shrubland in the Gran Sabana plateau. We expected that facilitation would be stronger at sites with more spatial associations. The four semiarid sites in Spain and the shrubland in Gran Sabana showed a high degree of positive species associations. Of the other two communities, one showed both positive and negative associations while negative ones predominated in Altos de Pipe. The direct experimental measure of neighbors' effect showed that positive interactions among species prevailed in communities where positive species associations dominated. The appearance of benefactor species in patches increased species richness compared with the surrounding inter-shrub spaces. Our results provide a link between spatial patterns and species interactions, where aggregation points to positive interactions and segregation to competitive or interference effects. Facilitation appears as a relevant process shaping communities under environmental constraints.     

Ordination methods and chironomid species in stony bottom streams

Stony bottom streams in Italy were sampled in 369 sites in different years, and 174 chironomid species (or species groups) were identified.The species by sites matrix was submitted to different ordination methods, with the aim of outlining the major factors that are responsible of the observed species composition.The methods considered were principal component analysis (PCA), detrended correspondence analysis (DCA) and non-metric multidimensional scaling (MDSCAL). These methods assume different models describing the species-responses to the environmental gradients.PCA gave poor results, the best species ordination was given by MDSCAL. DCA gave results in agreement with MDSCAL. DCA results were useful as a starting point to perform MDSCAL. MDSCAL was performed with different options. At last Procrustean analysis was carried out to have a single fitted configuration, that summarized the results given by the different MDSCAL methods.All multivariate analyses emphasized that the first ordination axis can be interpreted as a crenonrithron-potamon gradient, probably an oxygen availability and/or a water temperature gradient, whereas the second axis can be considered a water speed gradient, separating lotic from lentic sites.The 3rd and 4th ordination axes had apparently no ecological meaning.Separated clusters of species were never evident, so well defined chironomid species assemblages could not be outlined in this analysis.     

Bottom-up control and co-occurrence in complex communities: honeydew and nectar determine a rainforest ant mosaic

Complex distribution patterns of species-rich insect communities in tropical rainforests have been intensively studied, and yet we know very little about processes that generate these patterns. We provide evidence for the key role of homopteran honeydew and plant nectar in structuring ant communities in an Australian tropical rainforest canopy and understorey. We also test the ant visitation of these resources against predictions derived from the 'ant-mosaic' hypothesis. Two ant species were highly dominant in terms of territorial behaviour and abundance: Oecophylla smaragdina and Anonychomyrma gilberti . Both dominant ant species monopolised large aggregations of honeydew-producing homopterans. Attended homopteran species were highly segregated between these two ant species. For the use of extrafloral and floral nectar (involving 43 ant species on 48 plant species), partitioning of ant species among plant species and between canopy and understorey was also significant, but less pronounced. In contrast to trophobioses, simultaneous co-occurrence of different nectar foraging ant species on the same plant individuals was frequent (23% of all surveys). While both dominant ant species were mutually exclusive on honeydew and nectar sources, co-occurrence with non-dominant ant species on nectaries was common. The proportion of visits with co-occurrences was low for dominant ants and high for many sub-ordinate species. These findings support the ant mosaic theory. The differential role of honeydew (as a specialised resource for dominant ants) and nectar (as an opportunistic resource for all ants including the co-occurring non-dominant species) provides a plausible structuring mechanism for the Australian canopy ant community studied.     

Species diversity and persistence in restored and remnant tallgrass prairies of North America: a function of species' life history, habitat type, or sampling bias?

1. The re-assembly of native animal communities in restored landscapes is a relatively unexplored phenomenon for many taxa. Specifically, ecologists lack the ability to generalize about how species traits, habitat size, habitat type (here, remnant prairie vs. restored grassland), and temporal variation interact to affect species diversity or species' persistence probabilities. 2. To investigate these relationships, moth communities from 10 prairie remnants and restorations were sampled over a 3-year interval and a combination of NMDS ordination, logistic regression, and repeated measures anova were used to test hypotheses regarding how life history variables and habitat characteristics determine the degree to which restored habitats develop a moth fauna similar to remnants. 3. Within sampling years, restored tallgrass prairies that were >or= 7 years old possessed lepidopteran species assemblages that were generally similar to those in prairie remnants. Community similarity, however, was driven by common moth species likely to also occur in the surrounding agricultural habitat. Species persistence was significantly influenced by a series of trait combinations identified using principal components analysis. Temporal variation independent of habitat type or patch size was the most significant determination of variation in species composition among sites. 4. These results suggest that lepidopteran persistence in restored landscapes is at least partially determined by species' life history attributes. The correlation between sampling year and species richness suggests that both weather effects on species voltinism and interannual differences in sampling bias may make it difficult for land managers to detect changes in species abundance following disturbance or habitat management. 5. Species may not necessarily possess specific life history traits that reduce extinction risk or enhance recolonization probabilities in the highly modified agricultural landscape of the Midwestern USA. Rather, voltinism, fecundity, body size, and host plant specialization may influence the ability of species to maintain populations in the greater agricultural landscape or to escape mass mortality following disturbances imposed by prairie management.     

成都地区居室庭院蚂蚁区系及群落相似性分析

对成都地区居室庭院环境中的蚂蚁种类进行了调查,发现成都地区居室庭院蚂蚁种类有26种,隶属于3个亚科,12属。按地理和气候环境将成都地区蚂蚁区系划分为4个动物地理区域,对其种类组成、分布和区系特点进行了分析和讨论,根据群落相似性系数的比较,讨论了成都地区居室庭院蚂蚁群落的稳定性。     

Co-occurrence Patterns along a Regional Aridity Gradient of the Subtropical Andes Do Not Support Stress Gradient Hypotheses

The stress gradient hypothesis posits that facilitation and stress are positively correlated. The hump-shaped hypothesis, on the contrary, proposes that facilitation is greater at intermediate stress levels. The relationship between facilitation and environmental stress is commonly studied at small spatial scales and/or considering few species; thus, the implications of facilitation at a community level remain poorly understood. Here, we analyzed local co-occurrence patterns of all plant species at 25 sites within the subtropical Andes to evaluate the role of facilitation and competition as drivers of community structure. We considered a wide latitudinal gradient (19–26°S) that incorporates great variation in aridity. No previous studies have attempted to study these patterns across such a broad scale in warm deserts. Each locality was sampled at two scales (quadrat and patch), and co-occurrence was analyzed via null models. Furthermore, we tested for a relationship between plant co-occurrences and environmental aridity. Resulting patterns depended on life form. When all species were considered, negative associations were found, indicating competition. Woody/cactus life forms tended to be associated across communities, suggesting that there is facilitation between these life forms. Additionally, and unlike previous studies, we found positive associations among shrubs. The strength of the association between woody species changed non-monotonically with aridity. Herbs showed an inverted hump-shaped relationship, albeit ranging mostly among neutral values. Independent of the association type exhibited by different life forms, our community level results do not support current stress gradient hypotheses.     

Nematode Community Structure of Forest Woodlots: III. Ordinations of Taxonomic Groups and Biomass

Nematode communities of 18 Indiana mixed hardwood stands were comprised of an average of 23% tylenchid species, 31% dorylaimid species, and 46% species of six other orders. Based on total numbers of individuals present the stands averaged 42% tylenchids, 20% dorylaimids, and 38% individuals of other orders. Ordination of the sites using data only for tylenchid species gave an even distribution of sites, indicating little effect of site disturbances on tylenchid populations. By contrast an ordination using data for dorylaimid species showed a high degree ofd issimilarity between reference sites indicating that disturbances at some sites had drastically affected the dorylaimid fauna. An ordination utilizing biomass of all species present was very similar to the ordination based on data for dorylaimid species only.