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1.
The effect of vertical physico-chemical stratification on the planktonic microbial community composition of the deep, hypersaline and heliothermal Lake Ursu (Sovata, Romania) was examined in this study. On site and laboratory measurements were performed to determine the physical and chemical variables of the lake water, and culture-based and cultivation-independent techniques were applied to identify the members of microbial communities. The surface of the lake was characterized by a low salinity water layer while the deepest region was extremely saline (up to 300 g/L salinity). Many parameters (e.g. photosynthetically active radiation, dissolved oxygen concentration, pH, redox potential) changed dramatically from 2 to 4 m below the water surface in conjunction with the increasing salinity values. The water temperature reached a maximum at this depth. At around 3 m depth, there was a water layer with high (bacterio) chlorophyll content dominated by Prosthecochloris vibrioformis, a phototrophic green sulfur bacterium. Characteristic microbial communities with various prokaryotic taxa were identified along the different environmental parameters present in the different water layers. Some of these bacteria were known to be heterotrophic and therefore may be involved in the decomposition of lake organic material (e.g. Halomonas, Idiomarina and Pseudoalteromonas) while others in the transformation of sulfur compounds (e.g. Prosthecochloris). Eukaryotic microorganisms identified by molecular methods in the lake water belonged to genera of green algae (Mantionella and Picochlorum), and were restricted mainly to the upper layers.  相似文献   

2.
Abstract

An interdisciplinary approach was used to assess the biogeochemistry of three deposits of gold mine tailings in Nopiming Provincial Park, Manitoba, Canada. Each depositional site has developed varying levels of natural revegetation over the past 70 years. Although the tailings are the products of processing similar carbonate-hosted quartz-carbonate shear zones by the same methods, the physical, chemical, and hydrogeological conditions varied among sites. The sample from the barren tailings area at the Central Manitoba site was lower in pH (4.87 ± 1.34) and higher in total sulfur (337 ± 166 μmol/g) and copper (44.5 ± 20.9 μ mol/g) than samples from the other two sites. Microbial activities have impacted the biogeochemical distribution of carbon, sulfur (total, sulfide, sulfate), and iron (total, Fe(II)) in the tailings at all three sites. The microbial communities were distributed throughout the tailings, but the biomass and biodiversity were greatest at the surface in the revegetated (Ogama-Rockland) and partially revegetated (Gunner) tailings. In contrast, the most barren set of tailings (Central Manitoba) had the greatest biomass and biodiversity in the middle layer (15 cm depth), which also had the greatest abundance of metals, anions, and carbon. The distribution of fatty acid methyl esters (FAME) in the tailings was dependent on both the depth and the individual characteristics of the site. The biomass and biodiversity correlated with the physicochemical conditions, particularly as affected by water movement and hydrology. The primary determinants limiting natural attenuation of the sites may be insufficient calcite buffering, hydrogeology, and the distribution of microbes, rather than a lack of microbes.  相似文献   

3.
种植香根草对铜尾矿废弃地基质化学和生物学性质的影响   总被引:6,自引:0,他引:6  
徐德聪  詹婧  陈政  高毅  谢贤政  孙庆业  豆长明 《生态学报》2012,32(18):5683-5691
通过实地调查取样和室内分析,研究铜陵水木冲铜尾矿废弃地不同时期种植香根草(Vetiveria zizanioides L.)群落(近期种植香根草群落(V.zizanioides communities were established in the recent stage,JX),中期种植香根草群落(V.zizanioides communities were established in the middle stage,ZX)和早期种植香根草群落(V.zizanioides communities were established in the early stage,OX))对尾矿基质化学性质、微生物量和土壤酶活性的影响,探讨人工植被恢复对铜尾矿废弃地基质系统的修复作用。结果表明:香根草的定植能延缓铜尾矿的酸化过程,且随着香根草定植时间的延长,0—5 cm和5—20 cm层尾矿基质中总氮和速效磷含量提高(其中,0—5 cm层总氮积累更加显著),OX下0—5 cm表层基质总氮和速效磷的平均值分别是JX下的4.64倍和22.44倍。基质微生物量C、N含量和脱氢酶、过氧化氢酶、脲酶活性也随香根草种植时间的延长而有不同程度的升高,且基质化学性质对微生物量和酶活性有影响,其中基质微生物量C、N含量、脱氢酶和过氧化氢酶活性均与电导率呈显著或极显著负相关性;而基质微生物量N和4种酶活性均与总氮含量呈显著或极显著正相关性,表明总氮含量是影响基质微生物量N和酶活性的主要因子;基质微生物量N、脱氢酶和过氧化氢酶活性还与速效磷含量呈极显著正相关性。基质中Cu、Pb含量对脱氢酶、过氧化氢酶活性和微生物量均有显著抑制作用,而Zn对基质微生物活性有一定的激活作用。生长在尾矿废弃地上的香根草不仅显著地改善了铜尾矿废弃地的基质化学性质,且有利于基质微生物量和酶活性的增加,是一种良好的矿业废弃地生态修复物种。  相似文献   

4.
Sediment and tailings samples were collected from sites with a contrasting physicochemical gradient to investigate microbial squalene-hopene cyclase (sqhC) composition and distribution in terrestrial environments. Acidobacteria (66%), Alphaproteobacteria (96%) and Gammaproteobacteria (55%) were found to dominate sqhC communities, respectively, at the acidic Dajiuhu Peatland, the alkaline Heshang Cave and strongly acidic tailings of Tongling copper mine in China. Statistical analysis confirmed that pH was the important factor impacting the geographical distribution of sqhC at phylum level. sqhC gene abundance is comparable at the three sites. However, the total amount of hopanoids in per gram total organic matter content (TOC) is 1.75 times higher in the acidic peatland than that in the alkaline Cave and it is below the detecting limit in tailings of Tongling copper mine, inferring the potential impact of pH in regulating the hopanoid production.  相似文献   

5.
Along a single stream riffle, there is a typical flow pattern in which surface water enters the hyporheic zone in a downwelling zone at the head of the riffle and hyporheic water returns to the stream surface in an upwelling zone at the tail of the riffle. Distinct patterns of physical and chemical conditions in the hyporheic zone are likely to determine patterns of microbial activity and occurrence of hyporheic fauna. Interstitial water and core samples were taken at three depths in the downwelling and upwelling zones of a single riffle in the Speed River, Southern Ontario, Canada. Physical and chemical characteristics of the hyporheic water, bacterial density, protein content, detritus content and faunal composition of the hyporheic sediment were analysed. The downwelling and upwelling zones differed significantly in temperature, pH, redox potential, dissolved oxygen and nitrate with significant positive correlations occurring among the latter three. There were no differences in bacterial density or detritus content between the two zones nor between depths in either zone, but protein content, considered to be a measure of biofilm biomass, was significantly higher in the downwelling zone. Total density of hyporheic fauna and the number of taxa decreased with increasing depth in both upwelling and downwelling zones, and were positively correlated with surface water characteristics (oxygen, temperature and nitrate), sediment protein content and detritus; however, only a weak correlation was found with zone. The composition of taxa differed between the two zones, and faunal distribution was correlated with dissolved oxygen, detritus, protein content and depth.  相似文献   

6.

Aims

To describe the diversity and metabolic potential of microbial communities in uranium mine tailings characterized by high pH, high metal concentration and low permeability.

Methods and Results

To assess microbial diversity and their potential to influence the geochemistry of uranium mine tailings using aerobic and anaerobic culture‐based methods, in conjunction with next generation sequencing and clone library sequencing targeting two universal bacterial markers (the 16S rRNA and cpn60 genes). Growth assays revealed that 69% of the 59 distinct culturable isolates evaluated were multiple‐metal resistant, with 15% exhibiting dual‐metal hypertolerance. There was a moderately positive correlation coefficient (R = 0·43, < 0·05) between multiple‐metal resistance of the isolates and their enzyme expression profile. Of the isolates tested, 17 reduced amorphous iron, 22 reduced molybdate and seven oxidized arsenite. Based on next generation sequencing, tailings depth was shown to influence bacterial community composition, with the difference in the microbial diversity of the upper (0–20 m) and middle (20–40 m) tailings zones being highly significant (< 0·01) from the lower zone (40–60 m) and the difference in diversity of the upper and middle tailings zone being significant (< 0·05). Phylotypes closely related to well‐known sulfate‐reducing and iron‐reducing bacteria were identified with low abundance, yet relatively high diversity.

Conclusions

The presence of a population of metabolically‐diverse, metal‐resistant micro‐organisms within the tailings environment, along with their demonstrated capacity for transforming metal elements, suggests that these organisms have the potential to influence the long‐term geochemistry of the tailings.

Significance and Impact of the study

This study is the first investigation of the diversity and functional potential of micro‐organisms present in low permeability, high pH uranium mine tailings.  相似文献   

7.
The distribution and diversity of acidophilic bacteria of a tailings impoundment at the La Andina copper mine, Chile, was examined. The tailings have low sulfide (1.7% pyrite equivalent) and carbonate (1.4% calcite equivalent) contents and are stratified into three distinct zones: a surface (0-70-80 cm) 'oxidation zone' characterized by low-pH (2.5-4), a 'neutralization zone' (70-80 to 300-400 cm) and an unaltered 'primary zone' below 400 cm. A combined cultivation-dependent and biomolecular approach (terminal restriction enzyme fragment length polymorphism and 16S rRNA clone library analysis) was used to characterize the indigenous prokaryotic communities in the mine tailings. Total cell counts showed that the microbial biomass was greatest in the top 125 cm of the tailings. The largest numbers of bacteria (10(9) g(-1) dry weight of tailings) were found at the oxidation front (the junction between the oxidation and neutralization zones), where sulfide minerals and oxygen were both present. The dominant iron-/sulfur-oxidizing bacteria identified at the oxidation front included bacteria of the genus Leptospirillum (detected by molecular methods), and Gram-positive iron-oxidizing acidophiles related to Sulfobacillus (identified both by molecular and cultivation methods). Acidithiobacillus ferrooxidans was also detected, albeit in relatively small numbers. Heterotrophic acidophiles related to Acidobacterium capsulatum were found by molecular methods, while another Acidobacterium-like bacterium and an Acidiphilium sp. were isolated from oxidation zone samples. A conceptual model was developed, based on microbiological and geochemical data derived from the tailings, to account for the biogeochemical evolution of the Piuquenes tailings impoundment.  相似文献   

8.
Distribution and phylogenetic diversity of microbial communities in hot, deep underground environments in the Hishikari epithermal gold mine, southern part of Kyushu, Japan, were evaluated using molecular phylogenetic analyses. Samples included drilled cores such as andesitic volcanic rock (0.95-1.78 Ma) and the oceanic sedimentary basement rock of Shimanto-Supergroup (100 Ma), as well as geothermal hot aquifer waters directly collected from two different sites: AW-site (71.5 degrees C, pH 6.19) and XW-site (85.0 degrees C, pH 6.80) at a depth of 350 mbls (meters below land surface). Based on PCR-amplified 16S rRNA gene clone analysis, the microbial communities in the drilled cores and the hot aquifer water from the XW-site consisted largely of the 16S rRNA gene sequences, closely related to the sequences often found in marine environments, while the aquifer water from the AW-site contained 16S rRNA gene sequences representing members of Aquificales, thermophilic methanotrophs within the gamma-subdivision of the Proteobacteria and uncultivated strains within the beta-subdivision of Proteobacteria. The cultivable microbial community detected by enrichment cultivation analysis largely matched that detected by the culture-independent molecular analysis.  相似文献   

9.
Understanding structure–function links of microbial communities is a central theme of microbial ecology since its beginning. To this end, we studied the spatial variability of the bacterioplankton community structure and composition across the central Baltic Sea at four stations, which were up to 450 km apart and at a depth profile representative for the central part (Gotland Deep, 235 m). Bacterial community structure was followed by 16S ribosomal RNA (rRNA)- and 16S rRNA gene-based fingerprints using single-strand conformation polymorphism (SSCP) electrophoresis. Species composition was determined by sequence analysis of SSCP bands. High similarities of the bacterioplankton communities across several hundred kilometers were observed in the surface water using RNA- and DNA-based fingerprints. In these surface communities, the RNA- and DNA-based fingerprints resulted in very different pattern, presumably indicating large difference between the active members of the community as represented by RNA-based fingerprints and the present members represented by the DNA-based fingerprints. This large discrepancy changed gradually over depth, resulting in highly similar RNA- and DNA-based fingerprints in the anoxic part of the water column below 130 m depth. A conceivable mechanism explaining this high similarity could be the reduced oxidative stress in the anoxic zone. The stable communities on the surface and in the anoxic zone indicate the strong influence of the hydrography on the bacterioplankton community structure. Comparative analysis of RNA- and DNA-based community structure provided criteria for the identification of the core community, its key members and their links to biogeochemical functions.  相似文献   

10.
Global surface temperature is predicted to increase by at least 1.5°C by the end of this century. However, the response of soil microbial communities to global warming is still poorly understood, especially in high-elevation grasslands. We therefore conducted an experiment on three types of alpine grasslands on the Qinghai-Tibet Plateau to study the effect of experimental warming on abundance and composition of soil microbial communities at 0–10 and 10–20 cm depths. Plots were passively warmed for 3 years using open-top chambers and compared to adjacent control plots at ambient temperature. Soil microbial communities were assessed using phospholipid fatty acid (PLFA) analysis. We found that 3 years of experimental warming consistently and significantly increased microbial biomass at the 0–10 cm soil depth of alpine swamp meadow (ASM) and alpine steppe (AS) grasslands, and at both the 0–10 and 10–20 cm soil depths of alpine meadow (AM) grasslands, due primarily to the changes in soil temperature, moisture, and plant coverage. Soil microbial community composition was also significantly affected by warming at the 0–10 cm soil depth of ASM and AM and at the 10–20 cm soil depth of AM. Warming significantly decreased the ratio of fungi to bacteria and thus induced a community shift towards bacteria at the 0–10 cm soil depth of ASM and AM. While the ratio of arbuscular mycorrhizal fungi to saprotrophic fungi (AMF/SF) was significantly decreased by warming at the 0–10 cm soil depth of ASM, it was increased at the 0–10 cm soil depth of AM. These results indicate that warming had a strong influence on soil microbial communities in the studied high-elevation grasslands and that the effect was dependent on grassland type.  相似文献   

11.
种植豆科绿肥可以有效增加氮肥来源,提高水土保持能力,改善生态环境与土壤质量,是促进农业生产可持续发展的重要措施之一.本试验研究了柿子园种植白三叶草对土壤养分和生物学性质的影响,以探明果园种植豆科绿肥在土壤肥力改良与经济效益提升方面的潜力.设柿子园清耕、种植白三叶草2个处理,于2017年9月14日分别采集0~10、10~20、20~30和30~40 cm土层样品,以分析两个处理对土壤有机质、速效氮、微生物生物量碳、氮和酶活性的影响.结果表明: 与清耕相比,生草后的整个被测土层的有机质、速效氮、微生物生物量碳、氮及脲酶、蔗糖酶、过氧化氢酶、碱性磷酸酶活性均增加,其中,0~10 cm土层生草处理的有机质、微生物生物量碳增加效果显著,10~20 cm土层速效氮含量增加效果显著,0~20 cm土层中脲酶活性显著增加,而过氧化氢酶活性、蔗糖酶及土壤酶活性的几何平均值(GME)则在整个被测土层都显著增加.表明果园生草能改善土壤肥力状况,在一定程度上可减少化肥氮投入量,提高果园经济效益,是一种优良的果园栽培模式.  相似文献   

12.
Photochemical activity of phytobenthic communities in two freshwater lakes in East Antarctica was estimated using a submersible pulse-amplitude modulation (PAM) chlorophyll fluorometer, to answer the following questions: (1) Are the communities under bright summer photosynthetically active radiation (PAR) photosynthetically active? (2) If active, which community shows the most active signals? (3) Where is the most productive part (or depth) in the lake? Our limnological measurements indicated the two lakes were ultra-oligotrophic. Diving observations revealed that the phytobenthos of the lakes was moss-dominated which had different life-forms (moss shoots in shallow depths of both lakes, moss-pillars in the shallow lake, pinnacle moss-microbial complex community in the deeper lake). In addition, various mat-forming microbial communities inhabited the lake beds. In situ measurements of photochemical parameters indicated that shoots of mosses living just below the littoral slope, and the apical part of the moss pillars, had the highest photosynthetic activity in open water summer conditions, but mat-forming microbial communities and the other moss-microbial complex communities, showed rather lower activity. Most of the mat-forming phytobenthos surface also showed positive photosynthetic activity, but there were some cases of negligible signals in the shallow depth. This suggests that the photosynthetic activities of mat-forming communities in the shallow water were suppressed by strong ambient light in summer.  相似文献   

13.
14.
We analysed the response of microbial communities, characterized by phospholipid fatty acids (PLFAs), to changing hydrological conditions at sites with different nutrient levels in a southern boreal peatland. Although PLFAs of Gram‐negative bacteria were characteristic of the peatland complex, microbial communities differed among sites (ombrotrophic bog, oligotrophic fen, mesotrophic fen) and sampling depths (0–5, 5–10, 10–20, 20–30 cm). The microbial communities in each site changed significantly following water‐level drawdown. The patterns of change varied among sites and sampling depths. The relative proportion of Gram‐negative bacteria decreased in the upper 10 cm but increased in deeper layers of the fen sites. Fungi benefited from water‐level drawdown in the upper 5 cm of the mesotrophic fen, but suffered in the drier surfaces of the ombrotrophic bog, especially in the 5–10 cm layer. In contrast, actinobacteria suffered from water‐level drawdown in the mesotrophic fen, but benefited in the drier surfaces of the ombrotrophic bog. Basal respiration rate correlated positively with pH and fungal PLFA, and negatively with depth. We suggest that the changes in microbial community structure after persistent water‐level drawdown follow not only the hydrological conditions but also the patterns of vegetation change. Our results imply that changes in structure and activity of the microbial community in response to climate change will be strongly dependent on the type of peatland.  相似文献   

15.
Sulfate-reducing bacteria (SRB) have been observed in mining environments, but their presence has not been linked to specific physico-chemical and mineralogical factors. The present study was undertaken to assess the presence of SRB in several Au and Cu-Zn mine tailings located near Timmins, Ont., Canada, and determine the factors responsible for their presence. Vegetated and non-vegetated mine tailings were sampled for SRB enumeration, pH, Eh, water content, total carbon content and sequential chemical extraction. Results first showed that SRB populations were present at all sites and that their distribution varied with depth. Populations were recovered from neutral pH and slightly anoxic tailings and from highly acidic (pH 2) and oxic tailings. The total carbon content of the tailings was generally low and not related to the presence of vegetation. In addition, the carbon content did not affect SRB population distribution and appeared to be more related to the type of tailings, i.e., oxidized and acidic Cu-Zn tailings contained on average more carbon than Au tailings. Results also indicated that the water content of the tailings varied greatly with depth and was not related to the presence of SRB populations. The sequential chemical extraction showed that the pyrite content of the tailings was lower in Au tailings than in Cu-Zn tailings, and that some oxidized Cu-Zn sites were depleted in pyrite due to microbial and chemical oxidation. Our results indicate that SRB could be cultured from a variety of sites and sample types, and that factors such as pH, Eh, water content and carbon content at the collection sites did not exert control on their presence.  相似文献   

16.
17.
The Siberian Laptev Sea shelf contains submarine permafrost, which was formed by flooding of terrestrial permafrost with ocean water during the Holocene sea level rise. This flooding resulted in a warming of the permafrost to temperatures close below 0°C. The impact of these environmental changes on methanogenic communities and carbon dynamics in the permafrost was studied in a submarine permafrost core of the Siberian Laptev Sea shelf. Total organic carbon (TOC) content varied between 0.03% and 8.7% with highest values between 53 and 62 m depth below sea floor. In the same depth, maximum methane concentrations (284 nmol CH4 g−1) and lowest carbon isotope values of methane (−72.2‰ VPDB) were measured, latter indicating microbial formation of methane under in situ conditions. The archaeal community structure was assessed by a nested polymerase chain reaction (PCR) amplification for DGGE, followed by sequencing of reamplified bands. Submarine permafrost samples showed a different archaeal community than the nearby terrestrial permafrost. Samples with high methane concentrations were dominated by sequences affiliated rather to the methylotrophic genera Methanosarcina and Methanococcoides as well as to uncultured archaea. The presented results give the first insights into the archaeal community in submarine permafrost and the first evidence for their activity at in situ conditions.  相似文献   

18.
To determine if there is a core microbial community in the microbial populations of different wastewater treatment plants (WWTPs) and to investigate the effects of wastewater characteristics, operational parameters, and geographic locations on microbial communities, activated sludge samples were collected from 14 wastewater treatment systems located in 4 cities in China. High-throughput pyrosequencing was used to examine the 16S rRNA genes of bacteria in the wastewater treatment systems. Our results showed that there were 60 genera of bacterial populations commonly shared by all 14 samples, including Ferruginibacter, Prosthecobacter, Zoogloea, Subdivision 3 genera incertae sedis, Gp4, Gp6, etc., indicating that there is a core microbial community in the microbial populations of WWTPs at different geographic locations. The canonical correspondence analysis (CCA) results showed that the bacterial community variance correlated most strongly with water temperature, conductivity, pH, and dissolved oxygen (DO) content. Variance partitioning analyses suggested that wastewater characteristics had the greatest contribution to the bacterial community variance, explaining 25.7% of the variance of bacterial communities independently, followed by operational parameters (23.9%) and geographic location (14.7%). Results of this study provided insights into the bacterial community structure and diversity in geographically distributed WWTPs and discerned the relationships between bacterial community and environmental variables in WWTPs.  相似文献   

19.
Methane emissions from an alpine fen in central Switzerland   总被引:1,自引:0,他引:1  
Methane emissions and below ground methane pore water concentrations were determined in an alpine fen at 1,915?m a.s.l. in central Switzerland. The fen represented an acidic (pH 4.5–4.9), nutrient-poor to mesotrophic habitat dominated by Carex limosa, Carex rostrata, Trichophorum caespitosum and Sphagnum species. From late fall to late spring the fen was snow-covered. Throughout winter the temperatures never dropped below 0°C at 5?cm below the vegetation surface. Methane emissions in June, July, August and September were in the range of 125 (±26)–313 (±71)?mg?CH4?m?2?day?1 with a tendency to decrease along the summer season. Mean methane pore water concentrations at a depth of 20–40?cm below the vegetation surface were 526 (±32)?μM in June and in the range of 144 (±10)–233 (±7)?μM in July, August and September. At a depth of 0–20?cm the mean methane pore water concentrations dropped back to <20?μM with an almost linear decrease between 0 and 15?cm. Oxygen pore water concentrations were close to air saturation in the first few centimeters and dropped back below detection limit at a depth of 20?cm. In July and August the pore water concentrations of dissolved organic carbon (DOC) were in the range of 7.2–10.1?mg?C?l?1 at all depths. The pore water concentrations of acetate, formate and oxalate were in the range of 2.0–8.2?μM at all depths. Methanotrophic and methanogenic communities were quantified using pmoA and mcrA, respectively, as marker genes. The abundances of both communities showed a distinct peak at a depth of 10–15?cm below the vegetation surface.  相似文献   

20.
High-throughput 16S rRNA and 18S rRNA sequencing were performed to study the changes of soil microbial diversity and community structure under different heavy metal pollution levels in Chengxian lead–zinc mining area, Gansu Province. In this study, we characterized the main physicochemical properties, multiple heavy metal pollution, and microbial community structure of the soil in the tailings. The results show that the soil near the tailings pond was alkaline, barren and the heavy metals were seriously polluted. The microbial diversity and richness of S1 and S2 sites were significantly lower than that of CK2 site (P < 0·05), indicating that the heavy metal pollution could change the physicochemical properties and microbial community structure in soil. Among 97 identified core operating taxa of fungal communities, Ascomycota, Teguta and Basidiomycota were dominant at the phylum level, while among 1523 identified core operating taxa of bacterial communities, Actinomycota was dominant at the phylum level. In addition, the redundancy analysis and Spearman correlation analysis showed that the physicochemical properties and the heavy metal concentration had significant effects on the composition and distribution of soil microbial community. The basic characteristics of soil physicochemical properties, multiple heavy metal pollution and microbial community structure in the tailings were revealed, hoping to provide a basis for ecological rehabilitation of tailings by revealing the variance rule of microbial community diversity in the future.  相似文献   

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