Chromosomal Assignment of Six Genes (EIF4G3, HSP90, RBBP6, IL8, TERT,and TERC) in Four Species of the Genus Equus

We mapped six genes (EIF4G3, HSP90, RBBP6, IL8, TERT, and TERC) on the chromosomes of Equus caballus, Equus asinus, Equus grevyi, and Equus burchelli by fluorescence in situ hybridization. Our results add six type I markers to the cytogenetic map of these species and provide new information on the comparative genomics of the genus Equus.     

Serologic surveillance for vesicular stomatitis virus on Ossabaw Island, Georgia

Seventeen species of mammals and seven species of birds from Ossabaw Island, Georgia, were tested for vesicular stomatitis (VS) neutralizing antibodies. Seropositive results were restricted to mammals with six of 17 species testing seropositive for VS (New Jersey type) neutralizing antibodies. Seropositive species included: raccoons (Procyon lotor), white-tailed deer (Odocoileus virginianus), feral swine (Sus scrofa), cattle (Bos taurus), horses (Equus caballus), and donkeys (Equus asinus). All tests for VS (Indiana type) were negative.     

Evolutionary movement of centromeres in horse, donkey, and zebra

Centromere repositioning (CR) is a recently discovered biological phenomenon consisting of the emergence of a new centromere along a chromosome and the inactivation of the old one. After a CR, the primary constriction and the centromeric function are localized in a new position while the order of physical markers on the chromosome remains unchanged. These events profoundly affect chromosomal architecture. Since horses, asses, and zebras, whose evolutionary divergence is relatively recent, show remarkable morphological similarity and capacity to interbreed despite their chromosomes differing considerably, we investigated the role of CR in the karyotype evolution of the genus Equus. Using appropriate panels of BAC clones in FISH experiments, we compared the centromere position and marker order arrangement among orthologous chromosomes of Burchelli's zebra (Equus burchelli), donkey (Equus asinus), and horse (Equus caballus). Surprisingly, at least eight CRs took place during the evolution of this genus. Even more surprisingly, five cases of CR have occurred in the donkey after its divergence from zebra, that is, in a very short evolutionary time (approximately 1 million years).These findings suggest that in some species the CR phenomenon could have played an important role in karyotype shaping, with potential consequences on population dynamics and speciation.     

巫山蓝家寨遗址家畜的动物骨骼

2012年巫山蓝家寨遗址考古发掘中,出土了春秋时期的马(Equus caballus)、黄牛(Bos taurus)、山羊(Capra hircus)、鸡(Gallus gallus domesticus)、狗(Canis familiaris)、猪(Sus domestica)6种家畜的骨骼。这是三峡地区唯一一个在先秦时期六畜兼备的古文化遗址。遗址中的马、牛,是三峡地区同类家畜中时代最早的发现资料。三峡地区早期历史时期,人类肉食资源以野生动物为主,家畜动物骨骼发现材料较少。蓝家寨遗址出现种类较多的家畜动物种类,为全面分析和认识三峡地区经济形态发展过程、古居民行为模式和区域文化等,提供了重要资料。遗址中在春秋时期出现的家畜马和黄牛,与该时期各种区域文化在三峡地区的碰撞、交流、融合有关。     

Early Pleistocene Equus (Equidae,Perissodactyla) from Andersson Loc. 32 in Qixian,Shanxi, China

The Equus specimens of Andersson Loc. 32 in Qixian, Shanxi previously identified as Equus cf. sanmeniensis are rediscovered in this research. The skull has moderate size, deep nasal notch, clear preorbital fossa, undulated lateral outline, upper cheek tooth with simple fossette and incisor with incomplete cup, should be identified as Equus teilhardi. The mandible has cheek tooth with V-shaped linguaflexid, incisor with incomplete cup, moderate size, strong pli caballinid and deep ectoflexid on molar, should be identified as Equus qingyangensis. This skull is first record of a complete cranial material of E. teilhardi, reveals many important cranial features of E. teilhardi, supports anatomical comparison and phylogenetic discussion with other stenonid horses. The morphological differences between E. teilhardi and E. qingyangensis show their different niches, further explain the reason of their coexistence. Incomplete cup on incisor is an unstable feature. It has been found in several species of stenonid horses, likely a remaining feature derived from the most primitive Equus, Equus simplicidens. The small-sized stenonid horses with short limbs and incisors with incomplete cups likely have relation with E. teilhardi, such as Equus yunnanensis and Equus stehlini. E. qingyangensis has most primitive features in Eurasian stenonid horses.     

Extant and fossil Equus (Mammalia, Perissodactyla) skulls: a morphometric definition of the subgenus Equus

A sample of 225 skulls belonging to all extant species of Equus and of 33 fossil skulls of ages comprised between 3.4 Ma and 0.7 Ma was studied by multivariate analyses of size, shape, and form on four axial lengths. A simple bivariate discrimination using the overall palatal length and the cranial length allows an almost complete discrimination between modern (extant and young) equids (subgenus Equus ) and old plesippine and stenonine forms. The modern pattern, possibly related to a bigger brain case, seems to appear less than 1.5 Ma ago in fossil species that can already be recognized as closely related to the extant Grevy's zebras, plains zebras, and horses. This does not support separate branchings of Equus species from a common plesippine stem.     

Equus mosbachensis tautavelensis nov. subsp.,un nouvel Equidae (Mammalia,Perissodactyla) du gisement pleistocene moyen ante-rissien de la Caune de l'Arago (Tautavel,Pyrenees Orientales,France)

The horse discovered in the upper sediments from the middle pleistocene site of La Caune de l'Arago, attributedin 1968 to Equus caballus mosbachensis, constitutes a particular sub-species: Equus mosbachensis tautavelensis nov. subsp.     

Genetics of four plasma protein loci in Equus przewalskii: new alleles at the prealbumin, postalbumin and transferrin loci

This paper reports genetic variation at the prealbumin (Pr), postalbumin (Pa) and transferrin (Tf) loci in Equus przewalskii found using thin layer isoelectric focusing and an amphoteric separator. The method resolves all three loci plus serum esterase (Es) on a single gel, and typing of all four loci is readily achieved. In addition to the esterase alleles previously reported by Fisher & Scott (1979), five alleles were found at the Pr locus, three at the Pa locus and six at the Tf locus. Analysis of several mating types confirms inheritance is autosomal and codominant for all four loci.     

Genetics of four plasma protein loci in Equus przewalskii: new alleles at the prealbumin, postalbumin and transferrin loci

This paper reports genetic variation at the prealbumin ( Pr ), postalbumin ( Pa ) and transferrin ( Tf ) loci in Equus przewalskii found using thin layer isoelectric focusing and an amphoteric separator. The method resolves all three loci plus serum esterase ( Es ) on a single gel, and typing of all four loci is readily achieved. In addition to the esterase alleles previously reported by Fisher & Scott (1979), five alleles were found at the Pr locus. three at the Pa locus and six at the Tf locus. Analysis of several mating types confirms inheritance is autosomal and codominant for all four loci.     

Ancient DNA Clarifies the Evolutionary History of American Late Pleistocene Equids

Hippidions are past members of the equid lineage which appeared in the South American fossil record around 2.5 Ma but then became extinct during the great late Pleistocene megafaunal extinction. According to fossil records and numerous dental, cranial, and postcranial characters, Hippidion and Equus lineages were expected to cluster in two distinct phylogenetic groups that diverged at least 10 MY, long before the emergence of the first Equus. However, the first DNA sequence information retrieved from Hippidion fossils supported a striking different phylogeny, with hippidions nesting inside a paraphyletic group of Equus. This result indicated either that the currently accepted phylogenetic tree of equids was incorrect regarding the timing of the evolutionary split between Hippidion and Equus or that the taxonomic identification of the hippidion fossils used for DNA analysis needed to be reexamined (and attributed to another extinct South American member of the equid lineage). The most likely candidate for the latter explanation is Equus (Amerhippus) neogeus. Here, we show by retrieving new ancient mtDNA sequences that hippidions and Equus (Amerhippus) neogeus were members of two distinct lineages. Furthermore, using a rigorous phylogenetic approach, we demonstrate that while formerly the largest equid from Southern America, Equus (Amerhippus) was just a member of the species Equus caballus. This new data increases the known phenotypic plasticity of horses and consequently casts doubt on the taxonomic validity of the subgenus Equus (Amerhippus).     

Histomorphometric study of bone microstructure of primates and domestic animal with the goal of species identification with reference to the effects of domestication

Functional bone microstructure of long limb bones is a function of species-specific biomechanical properties such as locomotion and weight. Histomorphometry and statistics were used to identify various primate species (Hylobates moloch, Pongo satyrus borneensis, Pan tr. troglodytes, Gorilla g. gorilla, Homo sapiens), equid species (Equus caballus, Equus asinus, Equus mulus, Equus hemionus kulan, Equus ferus przewalskii) and also extinct horses e.g. iron age, medieval and neolithic forms on the microstructural level. Furthermore, bones from domesticated cattle, their Neolithic forms, pigs, sheep and goats (Bos taurus, Sus scrofa, Ovis aries, Capra hircus) were examined. Thin sections from proximal metacarpi or radii per species were taken in case of the domesticated animals and from distal humeri in case of the primates. Areas, perimeters, minimal and maximal axis of Haversian canals and secondary osteons were measured on digital images. Canonical discriminant analysis permits a differentiation of the species by these parameters of bone microstructure. Thus it is possible to distinguish between the different primate species, sheep and goats, horses, extinct horses, donkeys, mules and kulans on the microstructural level, however not between cattle and pig, E. f. przewalskii and Equus caballus, medieval and iron age horses. Neolithic cattle and horses do overlap, yet they are different from the modern forms.     

Isolation and chemical composition of the leucocytes from donkey, horse, mule and pig.

1. Leucocytes from the blood of adult and young donkeys (Equus asinus L.), adult horses (Equus caballus L.), adult mules (Equus asinus x Equus caballus) and adult pigs (Sus scrofa L.) were obtained in a high degree of purity (99.9%) using Na2-EDTA-dextrans mixtures. 2. Sialic acids were released, purified, identified and determined from both non-delipided and delipided leucocytes. 3. N-glycolylneuraminic was the predominant sialic acid. N-acetylneuraminic acid and N,O-diacetyl-neuraminic acid were also found in all materials. Except in pig, other unidentified sialic acid(s) were also detected. 4. The concentration of total sialic acids (microgram/mg protein) is different according to the species, and in donkey species according to the age. 5. Galactose, glucose, mannose, fucose and (in a less amount) ribose were determined. Their total content is about 2-3-fold that of hexosamines. 6. There is a higher cholesterol content in adult donkey leucocytes than in those of young ones. 7. Total lipids, cholesterol or phospholipid contents are similar among the leucocytes of the above-mentioned species. 8. The similarities are marked in the electrophoresis patterns of proteins and glycoproteins for the donkey, mule and horse samples. 9. The molecular weights for leucocytes proteins were estimated as ranging between 230,000 and 20,000; and for the main protein bands, between 120,000 and 22,000.     

Isolation of Y chromosome-specific microsatellites in the horse and cross-species amplification in the genus Equus

Y chromosome polymorphisms such as microsatellites or single nucleotide polymorphisms represent a paternal counterpart to mitochondrial DNA (mtDNA) for evolutionary and phylogeographic studies. The use of Y chromosome haplotyping in natural populations of species other than humans is still hindered by the lack of sequence information necessary for polymorphism screening. Here we used representational difference analysis (RDA) followed by a screen of a bacterial artificial chromosome (BAC) library for repetitive sequences to obtain polymorphic Y-chromosomal markers. The procedure was performed for the domestic horse (Equus caballus) and we report the first six Y-chromosomal microsatellite markers for this species. Three markers were also useful for haplotyping taxa of the zebra/ass lineage. Y-chromosomal microsatellite markers show a single haplotype in the domestic horse, whereas notable variation has been observed in the other members of the genus Equus.     

新疆阿尔金山自然保护区东部大型兽类数量和分布

2003年12月对阿尔金山保护区东部的6种大中型兽类进行了数量和分布状况的考察,发现藏野驴和藏羚羊的数量较以往数量有一定程度的增加,而野牦牛的数量有所下降,藏原羚、狼、赤狐的数量相对比较少。根据样线调查法计算,估计东部地区的藏野驴约8309只,藏羚羊1603只,野牦牛985只,藏原羚214只。从目前的调查看,有限的食物资源及人为因子（盗猎、开矿和围栏等）可能是制约野生动物种群数量增长的主要因素。     

Geographic distribution of an extinct equid (Equus hydruntinus: Mammalia, Equidae) revealed by morphological and genetical analyses of fossils

Equus hydruntinus inhabited Europe and the Middle East for more than 300 000 years. For a long time, palaeontological data failed to place E. hydruntinus into the equid phylogenetic tree, confronted with the fact that it shares primitive Equus characters with both zebras and asses, and derived characters with asses and hemiones. However, the study of a recently discovered skull points to a relationship with hemiones. Extraction of DNA from ancient samples from Crimea (E. hydruntinus) and Iran (E. cf. hydruntinus) yielded 134-288 bp of the mtDNA control region and 143 bp of the cytochrome b gene. This DNA analysis supports the proximity of E. hydruntinus and Equus hemionus suggested by skull and limb bone analyses, and rejects proximity to either Equus burchelli or the asses suggested by tooth morphology. Dental morphology may thus be of poor taxonomical value if used alone for establishing equid phylogenetic relationships. Furthermore, the small genetic distance between E. cf. hydruntinus of Iran and the classical E. hydruntinus of Crimea suggests that both samples belong to the same species. Accordingly, the geographic range of E. hydruntinus -- until now believed to be restricted to Europe, Israel, and Turkey -- can be extended towards East as far as Iran.     

河北蔚县大南沟哺乳动物化石及其地层时代

近年来,在河北蔚县一带晚新生界陆相沉积中,陆续发现有四个不同的化石层位,使这一地区晚新生代地层关系更加明确。本文所记述的大南沟化石点中的哺乳动物化石属于泥河湾期哺乳动物群,其地层时代为早更新世。     

Mass spectral analysis of domestic and wild equine apoA-I and A-II: detection of unique dimeric forms of apoA-II

In pigs, humans, chimpanzees and probably other great apes, a cysteine at residue 6 enables apolipoprotein A-II to form a homodimer. However, the apoA-IIs of other primates, lacking a cysteine residue, are monomeric. We have already reported that horse apoA-IIs form homodimers due also to a cysteine at residue 6. In this study, we wanted to determine whether other equine apoA-IIs might be monomeric. The high density lipoproteins were ultracentrifugally isolated from the plasmas of a horse (Equus caballus), a donkey (Equus asinus) and five wild equines: two types of zebras (Equus zebra hartmannae and Equus zebra quagga boehmi), a Przewalski's horse (Equus przewalskii), a Somali ass (Equus africanus somalicus) and a kiang (Equus kiang holdereri). Using liquid chromatography with electrospray-ionization mass spectrometry, we were able to obtain accurate values for the molecular masses of apoA-I and apoA-II. Homodimeric apoA-IIs were observed in each of the animals studied. The donkey had unique dimers, consisting of the proapolipoprotein A-II linked by a disulfide bond either to a mature apoA-II monomer or another proapoA-II. In addition, our data indicate that small amounts of apoA-I and apoA-II apparently are acylated.     

山西万荣的旧石器

山西万荣县荣河公社西桌子附近离石黄土中,与脊椎动物化石一起出土的旧石器有十余件,其地质时代为中更新世。     

Chromosomal distribution of the telomere sequence (TTAGGG)(n) in the Equidae

Telomeres are a class of repetitive DNA sequences that are located at chromosome termini and that act to stabilize the chromosome ends. The rapid karyotypic evolution of the genus Equus has given rise to ten taxa, all with different diploid chromosome numbers. Using fluorescence in situ hybridization (FISH) we localized the mammalian telomere sequence, (TTAGGG)(n), to the chromosomes of nine equid taxa. TTAGGG signal was located at chromosome termini in all species, however additional signal was seen at interstitial sites on some chromosomes in the Burchell's zebra, Equus quagga burchelli, the Hartmann's zebra, Equus zebra hartmannae, and at large heterochromatin-associated regions on the chromosomes of the donkey, Equus asinus. The interstitial signal in the zebras may be a relic of an ancient telomere-telomere fusion and mark the point at which two ancestral chromosomes may have fused. For the donkey, the heterochromatin-associated signal may represent degenerate telomere-like satellite sequences and identify a second type of satellite DNA for this taxon.     

南京汤山驼子洞的马科化石及其意义

200 0年在南京汤山葫芦洞直立人地点附近的驼子洞堆积中发现了又一处哺乳动物化石点。其中的马科化石有两种 :黄河马Equushuanghoensis和中国 (长鼻 )三趾马Hipparion(Proboscidipparion)sinense。这是自 1 95 9年发现黄河马化石以来首次发现黄河马的颅骨和完整的颊齿列标本。这两种马的同时出现说明含驼子洞动物群的堆积形成于早更新世。因此驼子洞堆积的发现是江宁地区下更新统的首次记录。驼子洞的黄河马和长鼻三趾马均为这两类马在秦岭淮河以南的首次记录 ,并反映了在早更新世曾发生过北方动物群跨越长江的南迁事件。