草假单胞菌HT1在蚕豆根和茎的定殖特性及对内生细菌多样性的影响

[背景] 关于蚕豆内生生防细菌的定殖规律及其对内生细菌微生物多样性的研究鲜有报道。[目的] 明确草假单胞菌HT1在蚕豆的定殖特性以及对根茎部内生细菌群落多样性的影响。[方法] 采用抗生素标记法测定菌株HT1的定殖特性,利用高通量测序技术分析该菌灌根处理与对照处理蚕豆根茎部内生细菌的群落多样性。[结果] 菌株HT1的定殖数量为根>茎>叶,呈先升后降的趋势,根部、茎部、叶部在第7天达到最大值,在第83天仍能检测到标记菌株。灌根处理降低了内生细菌的丰富度,提高了根内生细菌物种多样性;灌根处理组根部厚壁菌门、放线菌门、拟杆菌门丰度显著提高,茎部变形菌门的相对丰度有所升高但无显著影响;在属水平上,灌根处理后,根部如Romboutsia、Mitsuaria、乳杆菌属、德沃斯氏菌属等属的相对丰度明显升高,茎部假单胞菌、Muribaculaceae、Elstera、鞘氨醇单胞菌属等属的相对丰度明显升高。[结论] HT1菌株能在蚕豆植株体内定殖达83 d以上,并且可以影响蚕豆植株内部的微生物群落结构组成,提高相关微生物的相对丰度。     

生防菌根系定殖竞争作用对西瓜枯萎病发病机理的影响

【目的】西瓜枯萎病是由西瓜专化型尖孢镰刀菌(Fusarium oxysporum f.sp.niveum)引起的一种常见的毁灭性土传病害,对镰刀菌同属非致病性菌株与致病性菌株存在的竞争作用进行研究,有助于获得新的具有生防效果的菌株,从而拓宽西瓜枯萎病生物防治的手段。【方法】利用选择性培养基和稀释平板计数法对温室盆栽试验中西瓜根际和非根际土壤及植物组织中非致病性轮枝镰刀菌菌株(Fusarium verticillioides XA)与致病性尖孢镰刀菌(Fusarium oxysporum LD)进行计数,确定其在西瓜植株根际和组织中的定殖情况。【结果】将从田间西瓜枯萎病发病植株根部分离获得的菌株XA和LD接入健康土壤中,接种菌株XA既不会引起西瓜枯萎病发病症状,也不会影响西瓜植株生物量,但接种菌株LD导致严重发病症状。与单接种LD处理相比较,双接种(XA+LD)处理地上部鲜重和地上部干重都分别增加了151.2%和110%。XA菌株能成功定殖于西瓜根系,但在茎基部没有检测到。在接种菌株LD的处理中植物组织和土壤中致病性镰刀菌的数量达到(1.58 4.85)×104CFU/g。与单接种LD处理相比,双接种菌株XA和LD处理植物茎基部、根系、根际土壤和土体土壤致病性镰刀菌的数量分别下降63.3%、66.1%、3.3%和24.4%,根系、根际土壤和土体土壤非致病性镰刀菌的数量增加到(0.35 3.84)×104CFU/g;双接种处理对西瓜枯萎病的防效达57.8%。【结论】非致病性轮枝镰刀菌菌株XA可有效降低致病性尖孢镰刀菌LD对西瓜植株的定殖侵染能力,对西瓜枯萎病具有一定的生防效果。     

基因标记枯草芽孢杆菌BS-68A在黄瓜上定殖

目的:野生型枯草芽孢杆菌Bacillus subtilisBS-68能有效地防治由Pythium spp.和Fusarium oxporum引起的黄瓜立枯病和枯萎病。为了探究该菌株的生防机制,利用该菌株的黄绿荧光蛋白基因和氯霉素抗性基因标记菌株BS-68A研究其在黄瓜植株各个部位的定殖能力、种群动态和在根围的分布。方法和结果:用基因标记菌株发酵液分别对黄瓜种子进行浸种和浇穴处理,播种后30d,该菌能在黄瓜根部和茎基部定殖,不能在茎部和叶部定殖。浸种处理,该菌在茎基部的种群数量为3.1×104cfu/株,大于根部的种群数量4.1×102cfu/株;浇穴处理,该菌在茎基部的种群数量8.0×103cfu/株,低于根部的种群数量2.5×104cfu/株。     

红豆杉中产紫杉醇内生真菌分离部位的比较研究

目的 探讨红豆杉不同部位在内生真菌分离效率以及产紫杉醇菌株筛选率方面的规律性,为红豆杉产紫杉醇内生菌菌株的分离与筛选提供一定的理论依据.方法 从根、茎、叶3个器官取大小和表面积相同的太行山野生红豆杉(Taxous chinensis)材料,用组织块法分离红豆杉内生真菌,计算各部位内生真菌的分离效率;用高效液相法时分离到的内生真菌发酵液提取物进行紫杉醇含量分析,计算各部位产紫杉醇内生真菌的筛选率.结果 共分离到109株红豆杉内生真菌,根部、茎部和叶部分离效率指数分别为0.90、0.63和0.28;其中有28株产紫杉醇,紫杉醇菌株筛选率分别为31.48%、21.05%和17.65%.结论 在内生真菌的分离效率及其产紫杉醇内生真菌的筛选率上,均为根部>茎部>叶部,即根部在内生真菌分离效率和筛选产紫杉醇内生真菌效率上均具有明显的优势.     

芽胞杆菌浸种对水稻内生细菌群落结构的影响

水稻内生细菌群落是反映植株内环境是否健康稳定的重要生物学指标,芽胞杆菌是防治水稻病害的重要生防微生物。为揭示芽胞杆菌浸种处理对水稻内生细菌群落结构的影响,采用Illumina MiSeq测序的方法对水稻内生细菌的16S rRNA基因进行测序,剖析了芽胞杆菌浸种处理对不同水稻组织内生细菌的微生态调控作用。结果表明,3种芽胞杆菌浸种处理可以提高水稻根和茎部内生细菌群落的丰富度和均匀度,降低叶部内生细菌群落的丰富度和均匀度,显著增加根部内生细菌群落多样性。变形菌门(Proteobacteria)、厚壁菌门(Firmicutes)和拟杆菌门(Bacteroidetes)是水稻根部和茎部共有优势菌门,厚壁菌门和芽胞杆菌属(Bacillus)是叶部共有优势菌门和属。芽胞杆菌浸种处理显著提高了叶部内生厚壁菌门和芽胞杆菌属的相对丰度,增加了根系和茎部组织内生细菌的分类单元OTU(Operational Taxonomic Units)数量,对叶部组织影响不明显;降低了茎部和叶部中参与各种代谢通路的内生细菌丰度,显著增加了根部参与代谢通路的内生细菌丰度。因此,3种芽胞杆菌浸种处理可以显著改变水稻根部、茎部和叶部内生细菌群落结构,改善水稻生长的微生态环境。     

巴西固氮螺菌Yu62在玉米根的定植

将GFPmut2质粒中的gfp基因 (编码绿色荧光蛋白)克隆到载体pVK100中,构建成重组质粒pVK1001.将pVK1001通过电转化方法导入到联合固氮菌巴西固氮螺菌Yu62中,获得GFP标记的巴西固氮螺菌Yu62菌株.用标记菌株接种限菌培养条件下生长的玉米(农大3318)幼苗,在接种后8 d、12 d,用激光共聚焦扫描显微镜进行观测,结果表明巴西固氮螺菌Yu62菌株能定植于玉米根部皮层的薄壁细胞间隙.用扫描电镜和超薄切片电镜观察表明,大多数细菌主要定植于根表,少数菌可进入玉米根组织内.     

巴西固氮螺菌Yu62在玉米根的定植

将GFPmut2质粒中的gfp基因(编码绿色荧光蛋白)克隆到载体pVK100中,构建成重组质粒pVK1001。将pVK1001通过电转化方法导入到联合固氮菌巴西固氮螺菌Yu62中,获得GFP)标记的巴西固氮螺菌Yu62菌株。用标记菌株接种限菌培养条件下生长的玉米(农大3318)幼苗,在接种后8d、12d,用激光共聚焦扫描显微镜进行观测,结果表明巴西固氮螺菌Yu62菌株能定植于玉米根部皮层的薄壁细胞间隙。用扫描电镜和超薄切片电镜观察表明,大多数细菌主要定植于根表,少数菌可进入玉米根组织内。     

两株PGPR菌株的花生定殖及对根际细菌群落结构的影响北大核心CSCD

为探讨2株根际促生菌耐酪氨酸束村氏菌P9和吡咯伯克霍尔德氏菌P10对花生的促生机制。利用GFP及利福平对2个菌株进行标记、结合扫描电镜观察,追踪了2株PGPR菌株在花生组织中的定殖动态;并通过16S rRNA全长测序对菌株接种花生根际土壤的细菌多样性进行分析。结果表明,利福平标记的P9和P10菌株具有良好的遗传稳定性,其生长和促生特性与原始菌株基本一致。GFP标记菌株可在花生的根尖及其分生区定殖;利福平标记菌株可稳定定殖在土壤及花生的根、茎部,且接菌30 d后定殖数仍保持在10CFU/g数量级。与未接菌植株根际土壤相比,P9、P10及混合菌株接种组的细菌群落相似性更高;接菌组的Flavihumibacter、unidentified_Rhizobiaceae的相对丰度显著增加,芽孢杆菌属、链霉菌属等的丰度较CK有不同程度增加,溶杆菌属、无色杆菌属及假黄单胞菌属等的丰度降低。2株PGPR菌株均可通过直接定殖在植株组织中、间接影响土壤细菌群落结构而发挥对花生的促生作用,混合菌株接种效果更优。研究结果明析了2株促生菌的促生机制,并为菌株的应用提供了科学依据。     

茶树中内生菌的动态分布

从茶树的根、茎、叶中分离得到143株内生真菌,经显微形态特征观察鉴定为14个属,其中根部62株涉及11个属,茎部55株涉及9个属,叶部26株涉及6个属。结果表明,茶树的不同部位内生真菌的数量、分布和种群存有差异。     

杏黄兜兰菌根研究与应用

采用根组织切片法从杏黄兜兰根内分离到13株真菌,镰刀菌和组丝核菌为优势菌。将组丝核菌JF74、JF75、JF80制成菌剂,施入杏黄兜兰根部,对杏黄兜兰产生了一定的促进生长的效果。     

地黄连作对叶际细菌群落结构及多样性的影响

地黄为玄参科多年生草本药用植物,以块根入药,是我国著名的大宗药材.但是地黄在农业生产过程中存在严重的连作障碍问题,造成产量和品质急剧下降.细菌作为叶际微生物中最为丰富的一类,对宿主植物的生长发育与健康至关重要.叶际细菌区系研究为探索连作障碍形成机制及其消减措施提供了一个全新视角,同时差异菌群也可作为连作障碍发生的指示菌.本研究采用16S rDNA基因高通量测序结合传统可培养法分析地黄连作下叶际细菌群落结构及多样性变化.结果表明: 地黄连作导致叶际细菌群落结构发生明显变化,重茬地黄和病株地黄的叶际细菌群落结构较为相似,聚为一类,并明显区别于头茬地黄.同时,重茬地黄和病株地黄叶际细菌群落的均匀度指数、Shannon多样性指数、Simpson多样性指数均显著低于头茬地黄.物种注释分析显示,地黄叶际细菌主要由变形菌门(91.2%)、厚壁菌门(5.1%)和放线菌门(3.7%)组成.韦恩图分析发现,连作下地黄叶际细菌种类变化不大,但是结合相对含量来看,地黄连作导致叶际变形菌门含量增加,而厚壁菌门和放线菌门下降.在属水平上,头茬地黄叶际的微小杆菌属、芽孢杆菌属、节细菌属等潜在有益菌相对含量显著高于重茬地黄和病株地黄,而假单胞菌属呈现相反的变化趋势.传统可培养法结合致病性验证发现,在病株地黄叶片上广泛分离到的变形假单胞菌D9对地黄叶片表现出较强的侵染致病性.综上可见,地黄连作下叶际细菌群落结构发生偏移,导致有益菌含量下降而病原菌含量上升,造成连作地黄叶片病症频发,加剧了地黄再植病害的发生.     

地黄DNA分子标记与基因功能研究进展

地黄(Rehmannia glutinosa)是一种具较高药用价值和经济价值的植物。有关地黄的种质资源、遗传育种、种植、化学成分和药效、有效成分的提取和分析、植物组织培养和脱毒快繁等已有很多报道,但地黄核酸分子生物学研究尚少。该文从DNA分子标记、转录组学、基因功能和基因工程技术等方面对地黄核酸分子生物学研究进展进行综述,并分析其发展趋势。     

Biological control of bacterial spot of tomato caused by Xanthomonas campestris pv. vesicatoria by Rahnella aquatilis

Xanthomonas campestris pv. vesicatoria strain 2 was isolated from infected tomato seedlings grown in open field in Egypt. This strain produced irregular yellow-necrotic areas on tomato leaves and spotting of the stem. In an attempt to control this disease biologically, four experiments were conducted and tomato seedlings were pretreated, before the pathogen, with either of two antagonistic strains of Rahnella aquatilis through leaves, roots, soil or seeds. In all experiments, seedlings pretreated with R. aquatilis showed reduced susceptibility toward X. c. pv. vesicatoria. They also contained reduced protein concentration and showed reduced number of protein bands in SDS-PAGE analysis as well as increased fresh and dry weight relative to control seedlings inoculated with the pathogen only. This indicates that R. aquatilis reduced the deleterious effect and the stress exerted by X. c. pv. vesicatoria on tomato seedlings. Foliar application of R. aquatilis was the most effective method in disease reduction which could be attributed to the direct effect of the antagonistic bacteria on the pathogen. The highest amounts of fresh and dry weight ere obtained from seed treatment, which might suggest that bacterial seed inoculation provides earlier protection than could be achieved with foliar, soil or root treatment.     

PROTEIN S-ACYL TRANSFERASE 13/16 modulate disease resistance by S-acylation of the nucleotide binding,leucine-rich repeat protein R5L1 in Arabidopsis

Nucleotide binding, leucine-rich repeat(NB-LRR)proteins are critical for disease resistance in plants,while we do not know whether S-acylation of these proteins plays a role during bacterial infection. We identified 30 Arabidopsis mutants with mutations in NB-LRR encoding genes from the Nottingham Arabidopsis Stock Center and characterized their contribution to the plant immune response after inoculation with Pseudomonas syringae pv tomato DC3000(Pst DC3000). Of the five mutants that were hyper-...     

Factors Affecting Disease Development by Rhynchosporium alismatis in Starfruit (Damasonium minus), a Weed of Rice

The fungal pathogen Rhynchosporium alismatis is being developed for biological control of starfruit (Damasonium minus), an important aquatic weed in Australian rice fields. The development of R. alismatis in starfruit differs between juvenile and adult plants. Juvenile starfruit plants are stunted as a result of fungal infection, while in adult plants, the main effect is necrosis and chlorosis of floating leaves. A conidial concentration of 1×10⁴ conidia mL^-1 was adequate to cause disease symptoms on floating leaves, but the stunting effect on juveniles was caused by concentrations of at least 1×10⁵ conidia mL^-1. To successfully inoculate juvenile plants, the water must be drained before inoculation to expose plants to the inoculum. The artificial addition of dew periods did not enhance disease development in plants. The stunting of juvenile starfruit plants caused by the infection of R. alismatis may give rice plants a competitive advantage over the weed at the seedling stage     

Induced resistance by the mutualistic endophyte, Fusarium oxysporum strain 162, toward Meloidogyne incognita on tomato

The non-pathogenic endophytic fungus, Fusarium oxysporum strain 162, originally isolated from the endorhiza of tomato roots, reduces damage caused by Meloidogyne incognita, by inhibiting juvenile penetration of and development in the root. However, little is known about the mode of action of this endophyte fungus against the nematode. This study aimed at investigating how the endophyte affects nematode motility and survival and if induced resistance plays a role in the relationship. In a previous study, F. oxysporum strain 162 decreased nematode penetration of tomato up to 60%. In experiments using a split-root chamber to test for induced resistance, nematode penetration, number of galls, and number of egg masses were investigated 2 and 5 weeks after nematode inoculation. Split-root plants treated with F. oxysporum strain 162 showed 26-45% less nematode penetration, 21-36% less galls and a 22-26% reduction in the number of egg masses in the roots not directly inoculated with the fungus when compared to untreated control plants in repeated tests. In conclusion, inoculation of tomato plants with the non-pathogenic fungal endophyte F. oxysporum strain 162 resulted in a signficant reduction of nematode infection, which was in part due to induced resistance in the first 2-3 weeks after fungal inoculation.     

Effects of Pseudomonas chlororaphis on Pythium aphanidermatum and Root Rot in Peppers Grown in Small-scale Hydroponic Troughs

The ability of Pseudomonas (Ps.) chlororaphis isolate Tx-1 to suppress Pythium aphanidermatum and control root rot was investigated in sweet peppers grown in small-scale hydroponic trough units with recirculating nutrient solution. The agent was introduced to the nutrient solution 3 days after the peppers were inoculated with P. aphanidermatum, or 4 days before and 3 days after inoculation, or 4 days before and 3 and 10 days after. Controls either received no agent or pathogen, or the agent only (applied once, 4 days before the time of pathogen inoculations), or the pathogen only. The experiment was conducted in a greenhouse with repetitions beginning in January, March, and May. Severity of root browning associated with P. aphanidermatum, in the absence of Ps. chlororaphis, increased in the first, second and third repetitions, respectively, to 74% at 21 days, 28% at 21 days, and 68% at 11 days. In treatments with one, two, or three applications of Ps. chlororaphis, respectively, areas under root browning progress curves were reduced by 18-48%, 50-73%, and 62-79% compared to the pathogen controls, and recovery incidence of the pathogen from roots at 21 days after inoculation was reduced by 14-47%, 62-82%, and 60-89%. Roots not inoculated with P. aphanidermatum were whitish and not colonized by the pathogen. Density of Ps. chlororaphis in treated plants was usually 2×10³-1.2×10⁵ cfu g^-1 fresh roots. The Ps. chlororaphis treatments almost invariably prevented reductions in plant height, leaf area, fresh mass and dry mass of the shoots and of the roots, and root volume associated with P. aphanidermatum and root browning. It is concluded that Ps. chlororaphis Tx-1 strongly antagonized P. aphanidermatum in the pepper roots and that the agent has considerable potential for controlling root rot and maintaining productivity in commercial hydroponic peppers.     

四川巴郎山齿果酸模叶片氮素及其分配的海拔响应

在卧龙自然保护区, 按海拔梯度选择了齿果酸模(Rumex dentatus)的4个分布地点(2350、2700、3150和3530 m), 对各研究地点的齿果酸模进行了叶片光合、扩散导度、叶片碳稳定同位素组成(δ¹³C)、氮素含量、光合氮利用效率(PNUE)、比叶面积(SLA))等参数的测量, 以期揭示该植物叶片氮素、氮素分配情况及其他生理生态参数随海拔的响应趋势, 进而明确氮素及其分配在齿果酸模响应和适应海拔梯度环境的生物学过程中的作用。结果表明: 随着海拔的升高, 齿果酸模的叶片单位面积氮含量(N_area)随之增加, 进而光合能力随之增加。随着海拔升高而增加的扩散导度也在一定程度上促进了这一趋势, 这可能是落叶草本植物对于高海拔低温所导致的叶寿命缩短的适应结果。沿着海拔梯度, 植物叶片氮素和扩散导度均通过羧化位点与外界CO₂分压比(P_c/P_a)而间接影响叶片δ¹³C值, 且相比之下, 以氮素为基础的羧化能力对于P_c/P_a的作用更大些, 进而导致齿果酸模叶片δ¹³C随海拔增加; 随着海拔的升高, 齿果酸模叶片将更多的氮素用于防御性结构组织的建设, 这也是SLA和PNUE降低的主要原因; 在光合系统内部, 随着海拔的升高, 植物光合组织增加了用于捕光系统氮素的比例, 使得植物可以更好地利用随海拔升高而增强的光照资源, 进而促进了光合能力的增加。可见, 氮素及其在叶片各系统间(尤其是在光合系统与非光合系统间)的分配方式是齿果酸模适应和响应海拔梯度环境的关键。     

刺槐核糖体蛋白同源基因RpRPL22在共生结瘤过程中功能研究

目的: 核糖体蛋白(RPs)属于多功能蛋白,能够参与调控细胞生长和响应胁迫条件。RpRPL22是一个从豆科植物刺槐中分离得到的结瘤相关基因,通过序列比对发现其与核糖体大亚基蛋白RPL22高度同源。对其如何通过调控根瘤菌侵染而在共生结瘤过程中发挥重要作用进行了较为深入的探索。方法: 利用实时荧光定量PCR技术(qRT-PCR)分析RpRPL22在接菌后不同时间及不同植物组织的表达变化。利用cDNA末端快速扩增技术(RACE)获得目的基因cDNA全长。通过GFP报告基因进行RpRPL22亚细胞定位分析。通过Gateway BP重组技术构建RNA干扰(RNAi)重组载体,借助电转化法将重组载体转至农杆菌K599,利用农杆菌介导植物根部,接菌后观察和测量植株表型。首先从宏观水平统计观察目的基因是否对结瘤过程有影响,其次从分子水平揭示目的基因在共生结瘤过程的重要功能。结果: 不同接菌时期、不同植物组织目的基因qRT-PCR相对表达量结果显示,几乎在所有取样的接菌时间,目的基因RpRPL22在接菌根中的相对表达量都低于未接菌对照根,只有接菌后第25天除外。在成熟的根瘤中,接菌后第25天该基因的表达量也最高。洋葱表皮和毛状根亚细胞定位结果均显示在椰菜花叶病毒(CaMV)的35S启动子控制下,RpRPL22融合绿色荧光蛋白GFP的荧光信号在细胞核和细胞质有明显的表达。RNAi转化植株的表型统计观察结果,比如植株鲜重、植株的有效结瘤数目较对照组均有明显的降低;同时RNAi转化植株在根瘤菌侵染过程形成的侵染线数目和根瘤原基数目较对照均显著降低。根瘤切片实验用于观察根瘤显微超微结构,结果显示RNAi植株根瘤中固氮区的受菌侵染细胞数目与对照相比明显减少。电镜观察根瘤单个受菌侵染细胞中类菌体形态显示,RNAi根瘤中类菌体侵染细胞胞体多呈不规则形状,皱缩变形严重,环类菌体周间隙空间增大,多共生体融合,表现出细胞凋亡的迹象。对照根瘤中的受菌侵染细胞胞体多呈圆形椭圆形,胞质饱满丰富且分布均匀,细胞发育正常,表明RNAi植株根瘤发育过程明显受阻。结论: 核糖体蛋白(RP)能够参与调控豆科植物共生结瘤过程,相关同源基因RpRPL22可能在起始根瘤菌侵染植物和阻止类菌体降解过程中起重要作用。     

15个杜鹃花品种叶片解剖结构与植株耐热性的关系

以15个杜鹃花品种为试材,利用扫描电镜观察叶片17项解剖结构,应用变异系数、相关分析和聚类分析对叶片解剖结构进行筛选,采用隶属函数对各品种的耐热性进行综合评价,探讨杜鹃花叶片解剖结构与植株耐热性的关系,为杜鹃花耐热品种选育、引种栽培及栽培区划分提供细胞学理论依据.结果表明: 杜鹃花叶片为典型的异面叶,表皮细胞垂周壁略呈波浪状,气孔为无规则形,仅分布于下表皮,品种之间有16项解剖结构指标差异达到极显著水平,仅下表皮厚度为显著水平;叶片角质层厚度、气孔密度、气孔宽度、栅栏组织厚度和组织结构疏松度是影响耐热性的主要叶片解剖结构性状,而叶片厚度、气孔长度、孔径、气孔开度、海绵组织厚度、栅海比、上下表皮细胞长度和厚度、组织结构疏松度、中脉厚度与植株耐热性的关系不大.15个品种杜鹃花耐热性存在一定差异,其强弱顺序为:松江大桃红>状元红>绿色光辉>粉珍珠>外国红>蓝茵>笔止>大和之春>国旗红>玉玲珑>红珊瑚>宁波红>套瓣朱砂>爱丁堡>琉球红.15个品种杜鹃花抗热性可划分为4类:松江大桃红、状元红和绿色光辉为抗热类型;粉珍珠、外国红、蓝茵、笔止、大和之春、国旗红和玉玲珑为中度抗热类型;红珊瑚、宁波红、套瓣朱砂和爱丁堡为低抗热类型;琉球红为不抗热类型.杜鹃花耐热性的准确评价需参考形态结构、生理生化、遗传等因素,以及杜鹃花高温受害及受害后恢复状况.