Sperm ultrastructure of a member of the black coral family Aphanipathidae: Rhipidipathes reticulata (Anthozoa, Antipatharia)

Fertile male polyps of three colonies of the black coral Rhipidipathes reticulata (Aphanipathidae) from Togian Islands (Indonesia) have been the source of the sperm investigated at ultrastructural level, in order to compare their organization with that of other members belonging to the family Antipathidae and Myriopathidae. The extension of the studies to a representative of the family Aphanipathidae stresses once more the structural similarity of the male gametes in antipatharians. A sketch of the sperm model reports the similarity and differences in the examined taxa. Among the micro-characters, the cup-like body linked to the pericentriolar apparatus, is exclusive of the antipatharians. Other inclusions concern the more common pro-acrosomal vesicles or the acrosomelike structure observed only in Antipathella subpinnata and Myriopathes japonica. Lipid vesicles are occasionally present. A typical inclusion, the electron-dense content of which has a C-shaped configuration, is restricted to Rhipidipathes reticulata and is associated to the cup-like body or to the mitochondrion.     

Mutualism between the antipatharian Antipathes fiordensis and the ophiuroid Astrobrachion constrictum in New Zealand fjords

A large and accessible population of the antipatharian Antipathes fiordensis occurs in the fjords of southern New Zealand. Many colonies support specimens of the perching asteroschematid ophiuroid, Astrobrachion constrictum, some of which have been observed in situ for over 5 y. Adult A. constrictum are restricted to A. fiordensis, and have never been found on any other organism. In situ experiments have shown that A. constrictum feeds at night, primarily on mucus produced by A. fiordensis polyps, but also on planktonic prey captured by the antipatharian's nematocysts. Feeding movements of the ophiuroid arms clear the antipatharian colony of suspended material that might smother the polyps. Observations following natural catastrophic events and transplant experiments have shown that survival of A. fiordensis is probably increased if A. constrictum is present.     

Helicospiral growth in the whip black coral Cirrhipathes sp. (Antipatharia, Antipathidae)

The coiling pattern of the whip black coral Cirrhipathes sp. (Antipatharia, Antipathidae) was studied in four sites of the Bunaken Marine Park (North Sulawesi, Indonesia) characterized by different hydrodynamic conditions. The colonies show a helicospiral growth, with the polyps irregularly arranged on the external convex side of the turns of the stem. Only the colonies living in a very slow current environment reach the greatest lengths (up to 5 m) and show the highest number of rotations (up to 10, 3600°). The turns shape changes along the stem of the colonies, from the base to the apex, as evidenced by the ratio between the pitch and the diameter of each coil. In particular, the turns close to the basal plate have a smaller diameter and a larger pitch, while in the most distal turns, the diameter increases and the pitch decreases concurrently. We hypothesize that the shape variation of the whorls is triggered by the relationship between the growing stem and the intensity of the prevailing current. In this way, the colony can initially grow fast, moving away from the bottom, and then extend into the current, maximizing the plankton capture.     

The complete mitochondrial genome of the black coral Chrysopathes formosa (Cnidaria:Anthozoa:Antipatharia) supports classification of antipatharians within the subclass Hexacorallia

Black corals comprise a globally distributed shallow- and deep-water taxon whose phylogenetic position within the Anthozoa has been debated. We sequenced the complete mitochondrial genome of the antipatharian Chrysopathes formosa to further evaluate its phylogenetic relationships. The circular mitochondrial genome (18,398 bp) consists of 13 energy pathway protein-coding genes and two ribosomal RNAs, but only two transfer RNA genes (trnM and trnW), as well as a group I intron within the nad5 gene that contains the only copies of nad1 and nad3. No novel genes were found in the antipatharian mitochondrial genome. Gene order and genome content are most similar to those of the sea anemone Metridium senile (subclass Hexacorallia), with differences being the relative location of three contiguous genes (cox2-nad4-nad6) and absence (from the antipatharian) of a group I intron within the cox1 gene. Phylogenetic analyses of multiple protein-coding genes support classifying the Antipatharia within the subclass Hexacorallia and not the subclass Ceriantipatharia; however, the sister-taxon relationships of black corals within Hexacorallia remain inconclusive.     

Integrating microbiological, microsensor, molecular, and physiologic techniques in the study of coral disease pathogenesis

The study of coral diseases requires an integrated approach that includes a combination of field and laboratory methods. By combining and building upon information available from multiple disciplines, within both field and laboratory applications, we have been successful in characterizing a number of coral diseases. To illustrate the utility of the integrative approach two very different coral diseases, black band disease and plague, are discussed in detail. Comparison of our ongoing characterization of each disease demonstrates that, within the integrative approach, different combinations of microbiological, microsensor, molecular, and physiologic techniques are required. The pathobiology of black band disease, which consists of a complicated, synergistic microbial consortium functioning around a dynamic sulfur cycle, is slowly being unraveled using a combination of methods. Our study of plague, on the other hand, has progressed in a very different manner that is controlled by the fact that this disease has, to date, emerged in three forms on reefs of the Florida Keys. The study of plague types I, II, and III will be detailed to illustrate the difficulty of characterizing a disease that rapidly evolves in the natural environment of the reef. Our ongoing study of additional (also very different) coral diseases will be summarized from the perspective of combined methodologies to illustrate the range and magnitude of questions that must be addressed and answered in order to understand coral disease pathogenesis and thus coral disease etiology.     

Isolation and identification of chitin in the black coral Parantipathes larix (Anthozoa: Cnidaria)

Until now, there is a lack of knowledge about the presence of chitin in numerous representatives of corals (Cnidaria). However, investigations concerning the chitin-based skeletal organization in different coral taxa are significant from biochemical, structural, developmental, ecological and evolutionary points of view. In this paper, we present a thorough screening for the presence of chitin within the skeletal formations of a poorly investigated Mediterranean black coral, Parantipathes larix (Esper, 1792), as a typical representative of the Schizopathidae family. Using a wide array variety of techniques ((13)C solid state NMR, Fourier transform infrared (FTIR), Raman, NEXAFS, Morgan-Elson assay and Calcofluor White Staining), we unambiguously show for the first time that chitin is an important component within the skeletal stalks as well as pinnules of this coral.     

Mitogenome rearrangement in the cold-water scleractinian coral Lophelia pertusa (Cnidaria, Anthozoa) involves a long-term evolving group I intron

Group I introns are genetic insertion elements that invade host genomes in a wide range of organisms. In metazoans, however, group I introns are extremely rare, so far only identified within mitogenomes of hexacorals and some sponges. We sequenced the complete mitogenome of the cold-water scleractinian coral Lophelia pertusa, the dominating deep sea reef-building coral species in the North Atlantic Ocean. The mitogenome (16,150 bp) has the same gene content but organized in a unique gene order compared to that of other known scleractinian corals. A complex group I intron (6460 bp) inserted in the ND5 gene (position 717) was found to host seven essential mitochondrial protein genes and one ribosomal RNA gene. Phylogenetic analysis supports a vertical inheritance pattern of the ND5-717 intron among hexacoral mitogenomes with no examples of intron loss. Structural assessments of the Lophelia intron revealed an unusual organization that lacks the universally conserved ωG at the 3′ end, as well as a highly compact RNA core structure with overlapping ribozyme and protein coding capacities. Based on phylogenetic and structural analyses we reconstructed the evolutionary history of ND5-717, from its ancestral protist origin, through intron loss in some early metazoan lineages, and into a compulsory feature with functional implications in hexacorals.     

Cellular structure and ultrastructure of the black coral Antipathes aperta: 2. The gastrodermis and its collar cells

The gastrodermis of the black coral Antipathes aperta is associated with eight distinct types of cells, including two types of microbasic b-mastigophores (nematocysts), spumous and vesicular mucus cells, and ganglion cells that are essentially the same as in the epidermis. Three additional types of cells are unique to the gastrodermis, and are readily distinguished from those of the epidermis by their electron-opaque inclusions. These include lipoidal cells, zymogen digestive cells, and an unusual type of epitheliomuscular collar cell. The pharyngeal region is characterized by the presence of electron-opaque nematocysts, a scattering of zymogen cells, and a large number of collar cells. The latter are distinguished in part by the presence of dense microfibrillar processes that surround the microvilli and extend into adjacent collars. This interconnection results in the formation of an extensive pharyngeal meshwork. These collar cells are additionally distinguished by the placement of the collar and flagellum adjacent to a flared cup of cytoplasm. This portion of the cell is capable of endocytosis of relatively large unicellular prey, and apparently is capable of forming digestive vesicles as well. The pharyngeal gastrodermis grades into simple lobate septal filaments toward the base of the coelenteron, where large, granular nematocysts all but replace the smaller electron-opaque types Collar cells are found here as well, but in fewer numbers compared to the zymogen cells. Ultrastructural results are compared with those of other coelenterates and discussed in terms of food and modes of nutrition.     

Ten microsatellite loci for the reef‐building coral Acropora millepora (Cnidaria,Scleractinia) from the Great Barrier Reef,Australia

Here we present nine novel, polymorphic microsatellite loci developed for the scleractinian coral Acropora millepora (Acroporidae) from the Great Barrier Reef. In addition, we have assessed the specificity and polymorphism of five microsatellite loci previously developed for a Caribbean congener and one locus developed for an Indo‐Pacific congener. Only one of the latter six loci produced reliable results, yielding a total of 10 polymorphic microsatellite loci for A. millepora. Variability was tested on 20–23 individuals from a single population, plus another ～10 individuals from each of three different populations, resulting in five to 20 alleles per locus.     

Evolutionary origins of germline segregation in Metazoa: evidence for a germ stem cell lineage in the coral Orbicella faveolata (Cnidaria,Anthozoa)

The ability to segregate a committed germ stem cell (GSC) lineage distinct from somatic cell lineages is a characteristic of bilaterian Metazoans. However, the occurrence of GSC lineage specification in basally branching Metazoan phyla, such as Cnidaria, is uncertain. Without an independently segregated GSC lineage, germ cells and their precursors must be specified throughout adulthood from continuously dividing somatic stem cells, generating the risk of propagating somatic mutations within the individual and its gametes. To address the potential for existence of a GSC lineage in Anthozoa, the sister-group to all remaining Cnidaria, we identified moderate- to high-frequency somatic mutations and their potential for gametic transfer in the long-lived coral Orbicella faveolata (Anthozoa, Cnidaria) using a 2b-RAD sequencing approach. Our results demonstrate that somatic mutations can drift to high frequencies (up to 50%) and can also generate substantial intracolonial genetic diversity. However, these somatic mutations are not transferable to gametes, signifying the potential for an independently segregated GSC lineage in O. faveolata. In conjunction with previous research on germ cell development in other basally branching Metazoan species, our results suggest that the GSC system may be a Eumetazoan characteristic that evolved in association with the emergence of greater complexity in animal body plan organization and greater specificity of stem cell functions.     

Shallow-water zoantharians (Cnidaria,Hexacorallia) from the Central Indo-Pacific

Despite the Central Indo-Pacific (CIP) and the Indonesian Archipelago being a well-known region of coral reef biodiversity, particularly in the ‘Coral Triangle’, little published information is available on its zoantharians (Cnidaria: Hexacorallia: Zoantharia). In order to provide a basis for future research on the Indo-Pacific zoantharian fauna and facilitate comparisons between more well-studied regions such as Japan and the Great Barrier Reef, this report deals with CIP zoantharian specimens in the Naturalis collection in Leiden, the Netherlands; 106 specimens were placed into 24 morpho-species and were supplemented with 88 in situ photographic records from Indonesia, the Philippines, and Papua New Guinea. At least nine morpho-species are likely to be undescribed species, indicating that the region needs more research in order to properly understand zoantharian diversity within the CIP. The Naturalis’ zoantharian specimens are listed by species, as well as all relevant collection information, and in situ images are provided to aid in future studies on zoantharians in the CIP.     

Cellular structure and ultrastructure of the black coral Antipathes aperta: 1. Organization of the tentacular epidermis and nervous system

The tentacular epidermis of the black coral Antipathes aperta is organized into three distinct regions, containing at least nine different types of cells. The outermost region is dominated by spirocytes along with two types of nematocytes, organized into discrete wart-like batteries. The two nematocyte types both contain microbasic b-mastigophore nematocysts. The outer boundary of the wart is marked by the presence of both spumous and vesicular mucus cells. The ciliation of the wart is contributed principally by the spirocytes. Warts are enveloped and separated from one another by an unusual neurosensory cell complex that extends from the tentacular surface to the mesogleal connective tissue foundation. Funnel-like, flagellated cells composing the complex connect with ganglion cells composing the dominant portion of the nerve net system. Branches of this complex also penetrate the central portion of the wart, making direct contact with the cnidae. The tentacular mid-region is composed of nematocytes and spirocytes in various stages of maturation, along with epitheliomuscular cell (EMC) somata. The EMC's narrow apically extend toward the tentacle surface, forming contacts with the cnidae. The basal end of the EMC expands to form the larger portion of the tentacular musculature. The inner region of tentacular epidermis is marked by a neuromuscular complex sheathed by extensions of mesoglea. The ganglion cells occur as a plexus deep within the tentacle and form polarized junctions with the EMC's, but neuromuscular synapses are not well enough defined for documentation. Polarized synapses lacking well-defined membrane thickenings characterize the interneuronal junctions. Granular cells lining the mesogleal surface appear to be responsible for mesogleal fibrillogenesis.     

Host-associated speciation in the coral barnacle Wanella milleporae (Cirripedia: Pyrgomatidae) inhabiting the Millepora coral

Speciation by host shift is a common phenomenon observed in many symbiotic animals. The symbiont–host interaction is highly dynamic, but it is poorly documented in the marine realm. In the present study, we examined the genetic and morphological differentiation of the coral barnacle Wanella milleporae (obligate to fire corals) collected from four different Millepora host species in Taiwan to investigate the host specificity of this barnacle. Phylogenetic analysis of mitochondrial COI gene for 241 individuals of Wanella revealed five distinct clades, whose sequence divergences are comparable to values between other cogeneric barnacle species. The five clades also differ in shell and opercular plate morphology and colour. Genetic and morphological differentiations together strongly suggest the presence of cryptic species. Although the five clades do not display species-level host specificity, they showed a significant difference in preference on host growth form. Clades 1 and 2 were predominantly found on encrusting Millepora exaesa and Millepora platyphylla , while clades 3, 4 and 5 live exclusively on branching-form fire corals Millepora dichotoma and Millepora tenella . Phylogeny inferred from the combined mitochondrial COI, 16S and 12S (2182 bp) analysis suggests the division of the five clades into two major lineages congruent with the morphology of the host coral. Multiple independent invasions to the same form of host and subsequent speciation are evident in the Red Sea and Taiwan. Our results indicate that ecological/sympatric speciation could occur in marine symbiotic invertebrates through host shift and specialization. It appears that, as in their terrestrial counterparts, host–symbiont radiations in the marine realm are more prevalent than we expected and thus warrant further investigation.     

Motility of zooxanthellae isolated from the Red Sea soft coral Heteroxenia fuscescens (Cnidaria)

Unicellular dinoflagellate algae are among the best examples of organisms that exhibit biological clocks. This study examined the effect of light regime on rhythmicity of motility in the symbiotic dinoflagellate Symbiodinium sp., freshly isolated from the soft coral Heteroxenia fuscescens (Ehrenberg). Freshly isolated algal cells, placed under a 12-h L:12-h D cycle, exhibited motility with a diel rhythm. This motility occurred only during the period of illumination and lasted 8-9 h, with a peak at 2.5-4 h after lights on. Algal cells placed in an inverted light regime inverted their motility pattern. The response to the L/D regime was very precise, and even a 1-h shift backward or forward affected initiation of motility and time of its maximal peak. When placed in either constant light or dark, algal motility ceased until the L/D cycle was restored. These findings suggest that the rhythm is entrained by light cues and is not due to an endogenous circadian rhythm. Further, we provide evidence that the presence of juvenile hosts does not affect the algal motility pattern. These results offer the first evidence for the lack of impact by the host on rhythmicity of motility of free-living algal cells. The motility pattern found in freshly isolated algae may indicate the presence of light-induced diel rhythmicity in yet-to-be described free-living Symbiodinium.     

A new genus of soft coral of the family Alcyoniidae (Cnidaria, Octocorallia) with re-description of a new combination and description of a new species

A new genus, Aldersladum (family Alcyoniidae), is established to accommodate a previously described species, Efflatounaria sodwanae Benayahu, 1993 (family Xeniidae) from Sodwana Bay, South Africa that was wrongly assigned to the latter genus. This species is redescribed and a second new species, Aldersladum jengi from Penghu Is., Taiwan, is described. The diagnostic features of the new genus include the presence of only figure-eight shaped platelets in all parts of the colony, thus differentiating it from all known genera of the Alcyoniidae. Based on examination of additional material from other localities, the zoogeographical distribution of the genus is confirmed to include the coral reefs of South Africa, Kenya, Gulf of Oman, Taiwan and Japan. Phylogenetic analyses of two mitochondrial genes strongly support its placement in the family Alcyoniidae.     

Age and growth of Lutjanus kasmira (Forskål) in Hawaiian waters

The growth of Hawaiian taape, Lutjanus kasmira , was studied by examining otoliths and by analysing length-frequency distribution. Annual hyaline and opaque markings were visible in whole mounts of sagittae, which were verified by enumeration of daily increments with a scanning electron microscope (SEM) and through marginal increment analysis. The von Bertalanffy growth curve was fitted to the data, resulting in: where t. l . is total length (cm) and t is age (years). SEM observations revealed that the slowgrowth hyaline zones were composed of daily increments too small (0.4–0.8 μm) to be resolved optically. Thus, age estimates derived by numerically integrating otolith growth rate data obtained with a light microscope showed a negative bias, resulting in overestimation of growth rates. Parameter estimates obtained from three different types of length-frequency analysis were also unstable. This was due, at least in part, to differences in the size composition of fish sampled with different fishing gears and from different depths.
The growth rate registered in Hawaii falls within the reported growth coefficients of lutjanids, whereas it is one of the highest in the Pacific and clearly higher than a deep-water lutjanid species growth in Hawaii. Probably, this high growth rate may have been enhanced by the relative lack of competitors in the depauperate Hawaiian marine fish community.     

Growth rings, growth ring formation and age determination in the mangrove Rhizophora mucronata

BACKGROUND AND AIMS: The mangrove Rhizophora mucronata has previously been reported to lack annual growth rings, thus barring it from dendrochronological studies. In this study the reported absence of the growth rings was reconsidered and the periodic nature of light and dark brown layers visible on polished stem discs investigated. In addition, the formation of these layers in relation to prevailing environmental conditions, as well as their potential for age determination of the trees, was studied. METHODS: Trees of known age were collected and a 2.5-year cambial marking experiment was conducted to determine the periodic nature of the visible growth layers. KEY RESULTS: Annual indistinct growth rings were detected in R. mucronata and are defined by a low vessel density earlywood and a high vessel density latewood. The formation of these growth rings and their periodic nature was independent from site-specific environmental conditions in two forests along the Kenyan coast. However, the periodic nature of the rings was seriously affected by slow growth rates, allowing accurate age determination only in trees with radial growth rates above 0.5 mm year(-1). The onset of the formation of the low vessel density wood coincided with the onset of the long rainy season (April-May) and continues until the end of the short rainy season (November). The high vessel density wood is formed during the dry season (December-March). Age determination of the largest trees collected in the two studied forests revealed the relatively young age of these trees (+/-100 years). CONCLUSIONS: This study reports, for the first time, the presence of annual growth rings in the mangrove R. mucronata, which offers further potential for dendrochronological and silvicultural applications.     

On the reliability of the growth rings in two species of the family Characidae in the Sudan

The scales, opercula and vertebrae from 69 Hydrocyon forskali and 63 Alestes dentex were investigated for their reliability as aging structures. In both species the scales were unreliable due to their regenerative property, in spite of the clarity of their growth rings.Back-calculated lengths from the first growth ring laid on opercula and vertebrae resulted in values that coincided with the annual growth of the two species. In H. forskali, the mean back-calculated length from the two bones were 16.2 ± 5.9 and 16.8 ± 4.4 respectively, and for A. dentex, 11.1 ± 1.7 and 12.8 ± 1.8, respectively.Predictive equations for bone radius from fish length were written for both species. In this study, reliability was maximal between the observed and back-calculated lengths for both species (r > 0.95).     

Annual growth rings, rainfall-dependent growth and long-term growth patterns of tropical trees from the Caparo Forest Reserve in Venezuela

1 Tree-ring analyses and dendrometer measurements were carried out on 37 tree species in a semi-deciduous forest of the Reserva Forestal de Caparo, Venezuela, where the mean annual rainfall is about 1700 mm and there is a dry season from December to March. The main purposes of the investigation were to show the seasonality of cambial growth, and the connection between precipitation patterns and tree-ring curves. Long-term rates of wood increment were also estimated.
2 Cambial markings in consecutive years showed that annual rings were formed by many species.
3 The distinctiveness of growth zones was usually greater in deciduous species than in evergreen species, although not all deciduous species had distinct rings.
4 Dendrometer measurements showed that the annual growth rhythm was related to precipitation patterns. Evergreen species tended to show only a short interruption of wood growth (during the later part of the dry season), whereas deciduous species stopped growth completely at the end of the rainy season.
5 For deciduous species, regression analyses showed close relations between tree-ring width and the sum of precipitation outside the rainy seasons (i.e. November to April). Evergreen species reacted to the total annual amount of precipitation.
6 Variation in longest available ring chronology (for Terminalia guianensis ) showed little correlation with the El Niño–Southern Oscillation effect.
7 On average trees from natural forests showed relatively constant growth over the entire life span. Plantation trees grew fast up to an age of 15–20 years, but annual increments then decreased to values seen in natural forest trees.     

Alterations in haemato-biochemical profile and blood metabolites during different periods of prepubertal growth in black Bengal goat (Capra hircus): effect of sex and season

The study was carried out to investigate hemato-biochemical profile and blood metabolites during different periods of pre-pubertal growth in summer- and winter-born black Bengal kids of either sexes. The body weight was 8.07 ± 0.21 kg on 180 day with significantly (P < 0.01) higher growth in male kids. The winter born kids exhibited significantly (P < 0.01) higher body weight, packed cell volume (PCV), hemoglobin (Hb), total leukocyte counts (TLC), glucose and cholesterol and significantly (P < 0.01) lower non-esterified fatty acids (NEFA) and α-amino nitrogen (AAN). Both PCV and Hb were lowest on day 15 and then increased significantly (P ≤ 0.01) and reached maximum value at 90 days (PCV) and 180 days (Hb). TEC increased significantly (P ≤ 0.01) from day 15 to 180 days and reached its maximum value at 180 days age. Both glucose and total cholesterol were maximum at day 15 and significantly (P ≤ 0.01) decreased with the advancement of age and found lowest was at day 150. But, total protein was lowest at day 15 and increased significantly (P ≤ 0.01) up to day 150. NEFA and AAN were lowest on day 15 and increased significantly (P ≤ 0.01) with the advancement of age and reached peak value on 180 days.