Apoptosis and Morphology in Mouse Embryos by Confocal Laser Scanning Microscopy

Confocal laser scanning microscopy combined with a vital stain was used to study apoptosis in organogenesis-stage mouse embryos. Apoptosis has previously been visualized in whole embryos using the vital dyes acridine orange, Nile blue sulfate, and neutral red. In the present study, mouse embryos were harvested on Gestation Day 9 and stained with the vital lysosomal dye LysoTracker Red. Following incubation in the stain, embryos were fixed overnight in 4% paraformaldehyde, dehydrated in a graded methanol series, and cleared in benzyl alcohol/benzyl benzoate. The resulting embryo is almost transparent and retains specific LysoTracker Red staining. To achieve optical sectioning through embryos, it was necessary to use low-power objectives. With this procedure, the entire embryo can be optically sectioned and reconstructed in three dimensions to reveal areas of dye staining. Our results demonstrate specific regions undergoing programmed cell death in normal development and increased LysoTracker staining in embryos exposed to hydroxyurea. This procedure allows for the optical imaging of whole Day 9 ( approximately 22 somites) embryos that were greater than 700 microm thick in the z axis and can be applied to studies involving neural tube formation or other aspects of organogenesis.     

应用激光扫描共聚焦显微镜研究卵母细胞和早期胚胎的细胞骨架

介绍了应用激光扫描共聚焦显微镜, 结合免疫荧光技术研究卵母细胞和早期胚胎细胞骨架的方法.观察了β-微管蛋白、γ-微管蛋白、微丝以及染色体在小鼠卵母细胞和早期胚胎中的分布和形态, 讨论了实验过程中的注意事项以及实验结果的分析和处理方法.     

活细胞钙动态的共聚焦扫描显微镜检测技术

共聚焦激光扫描显微镜（Confocal Laser Scarming Microscope,CLSM）广泛应用于活细胞内钙敏感探针标记的钙水平的动态测量。较之传统的显微镜CLSM在钙成像分析上有着不可比拟的优越性,但也存在一些缺陷,近些年陆续出现了一些针对这些缺陷的改善措施,如比率法、葡聚糖探针及其他一些新技术与共聚焦显微镜的联合应用等,并且出现了诸如双光子显微镜等新型激光共聚焦显微镜。随着共聚焦钙成像技术的不断发展进步,其今后的应用前景将会越越广阔。     

Lucifer Yellow Uptake in Cells and Protoplasts of Daucas carota Visualized by Laser Scanning Microscopy

The uptake of lucifer yellow CH by suspension-cultured carrotcells and protoplasts has been studied by laser scanning microscopy.This fluorochrome, which does not diffuse across membranes,gradually accumulates in the cell vacuole over a period of hours.In contrast, the central vacuole of protoplasts did not showlucifer yellow fluorescence. The latter was restricted, in protoplasts,to punctate sources in the peripheral cytoplasm. Confocal opticsallowed the complexity of the vacuolar system to be dramaticallydepicted with the laser scanning microscope. Control experimentssupport the contention that lucifer yellow uptake, as in othereukaryotic systems, occurs via endocytosis. Key words: Carrot cells, endocytosis, laser scanning microscopy, lucifer yellow CH, protoplasts, vacuolar apparatus     

激光共聚焦扫描观察脑片及其神经元内RNA与DNA变化的技术

本研究采用双重染料Ａｃｒｉｄｉｎｅ Ｏｒａｎｇｅ（ＡＯ）对常规长时程增强（ＬＴＰ）电生理实验后的视皮层脑片进行荧光标记,并应用激光共聚焦扫描显微镜（ｃｏｎｆｏｃａｌ ｌａｓｅｒ ｓｃａｎｎｉｎｇ ｍｉｃｒｏｓｃｏｐｅ,ＣＬＳＭ）,测定ＬＴＰ形成过程中脑片局部ＲＮＡ和ＤＮＡ的变化。结果表明：长明程增强的诱导期与维持期脑片空白对照组比较,视皮层ＯＣ１区局部ＲＮＡ显著增高。此外,本研究还对使用激光扫描共     

IPL作用下鼠皮形态改变的显微观察与初步分析

观察光子嫩肤(IPL)后鼠皮的形态学随时间的改变情况,如:表皮层、真皮层的增厚或变薄的情况。探讨IPL作用下,皮肤的表皮、真皮厚度变化与IPL在特定波长的能量密度的关系。以小白鼠作为研究对象,先去毛,用IPL在一定波长不同的能量密度照射活体小白鼠皮肤,分别在照射前、照射后,以及之后的1天,3天,7天应用激光共聚焦显微镜观察皮肤内部的结构,并对其不同的能量密度与照射前相比进行分析,讨论了真皮胶原蛋白在组织的修复过程的作用及其中的关键因素。     

利用激光扫描共聚焦显微技术观察同源四倍体双胚苗水稻的胚胎学特征

利用激光扫描共聚焦显微技术对同源四倍体双胚苗水稻的受精过程、胚胎发育过程和双胚来源进行观察鉴定。研究结果表明,同源四倍体水稻和二倍体水稻在发生受精作用的时间上不存在很大的差异。双胚苗水稻的受精作用和胚胎发育表现出明显的特异性,其双胚苗性状有其胚胎学根源,双胚可能有4种来源,即来源于由双套胚囊形成的双胚、由多卵卵器中的卵细胞和类卵细胞分别通过受精作用形成双胚、由特异性的反足细胞通过异常发育后形成额外的幼胚、由胚乳细胞通过异常发育后形成胚乳型幼胚。通过对试验材料的受精频率及其结实率进行比较后发现,双胚苗水稻具有更弱的有性生殖能力,其遗传可塑性更强,这为离子束介导技术的研究找到了比较好的受体材料。     

利用激光扫描共聚焦显微术对同源四倍体水稻胚囊形成与发育的进一步观察

应用改进的整体染色透明激光扫描共聚焦显微术(WCLSM),对同源四倍体水稻PDER-2B-4x胚囊的形成与发育过程进行观察。发现其胚囊的形成发育过程与二倍体的一致,可以清楚地划分为8个发育时期,即孢原细胞形成期、大孢子母细胞形成期、大孢子母细胞减数分裂期、功能大孢子形成期、单核胚囊形成期、胚囊有丝分裂期、八核胚囊发育期和成熟胚囊期。除正常发育的过程外,大孢子发育的各个过程均出现一些异常现象,包括:细胞退化、核位置异常、核数目异常和细胞分化异常等。这些异常可能最终导致多种结构异常成熟胚囊的形成。     

Immunological Detection of Cytoskeletal Proteins In the Exoerythrocytic Stages of Malaria By Fluorescence and Confocal Laser Scanning Microscopy

ABSTRACT. Using monospecific antibodies, the presence and distribution of tubulin, actin, myosin, intermediate filaments, and lamins were examined in the exoerythrocytic liver schizont of Plasmodium berghei by conventional indirect fluorescent antibody methods and confocal laser scanning microscopy. the binding reactivity of the antibodies to parasite proteins was determined by Western blot analysis. the localisation of all antibodies in control host hepatocytes followed expected distributions in both uninfected and infected hepatocytes; by contrast, reactivity to the exoerythrocytic schizont was variable. the parasite reacted positively with selected anti-tubulin, -actin, and -myosin antibodies in both fluorescence and Western blot analysis. Anti-lamin antibodies were positive by confocal indirect fluorescent antibody labelling, but no labelling was detected with anti-intermediate filament antibody. Within the technical limits of resolution of the methods as applied to asynchronous parasite infections, not one of the antibodies reacting positively with the parasite by the indirect fluorescent antibody technique could be shown to identify unequivocally the classic architectural features associated with their respective target organelles, i.e. microtubules, stress-fibres or the nuclear envelope.     

Mapping of Heavy Metal Ion Sorption to Cell-Extracellular Polymeric Substance-Mineral Aggregates by Using Metal-Selective Fluorescent Probes and Confocal Laser Scanning Microscopy

Biofilms, organic matter, iron/aluminum oxides, and clay minerals bind toxic heavy metal ions and control their fate and bioavailability in the environment. The spatial relationship of metal ions to biomacromolecules such as extracellular polymeric substances (EPS) in biofilms with microbial cells and biogenic minerals is complex and occurs at the micro- and submicrometer scale. Here, we review the application of highly selective and sensitive metal fluorescent probes for confocal laser scanning microscopy (CLSM) that were originally developed for use in life sciences and propose their suitability as a powerful tool for mapping heavy metals in environmental biofilms and cell-EPS-mineral aggregates (CEMAs). The benefit of using metal fluorescent dyes in combination with CLSM imaging over other techniques such as electron microscopy is that environmental samples can be analyzed in their natural hydrated state, avoiding artifacts such as aggregation from drying that is necessary for analytical electron microscopy. In this minireview, we present data for a group of sensitive fluorescent probes highly specific for Fe³⁺, Cu²⁺, Zn²⁺, and Hg²⁺, illustrating the potential of their application in environmental science. We evaluate their application in combination with other fluorescent probes that label constituents of CEMAs such as DNA or polysaccharides and provide selection guidelines for potential combinations of fluorescent probes. Correlation analysis of spatially resolved heavy metal distributions with EPS and biogenic minerals in their natural, hydrated state will further our understanding of the behavior of metals in environmental systems since it allows for identifying bonding sites in complex, heterogeneous systems.     

Vector Alkaline Phosphatase Substrate Blue III: One Substrate for Brightfield Histochemistry and High-resolution Fluorescence Imaging by Confocal Laser Scanning Microscopy

A number of histochemical chromogenic substrates for alkaline phosphatase are commercially available and give reaction products with a range of colours for brightfield examination. Some of these reaction products are also fluorescent, exhibiting a wide excitation range and a broad emission peak. We report here that one of these substrates, Vector Blue III, yields a stable, strongly fluorescent reaction product with an excitation peak around 500 nm and a large Stokes shift to an emission peak at 680 nm. The reaction product can be excited using a mercury lamp with a fluorescein excitation filter or an argon ion laser at 488 nm or 568 nm, and the emission detected using a long-pass filter designed for Cy-5. Thus, a single substrate is suitable for brightfield imaging of tissue sections and high-resolution analysis of subcellular detail, using a confocal laser scanning microscope, in the same specimen.     

Differentiation of Methanosaeta concilii and Methanosarcina barkeri in Anaerobic Mesophilic Granular Sludge by Fluorescent In Situ Hybridization and Confocal Scanning Laser Microscopy

Oligonucleotide probes, designed from genes coding for 16S rRNA, were developed to differentiate Methanosaeta concilii, Methanosarcina barkeri, and mesophilic methanogens. All M. concilii oligonucleotide probes (designated MS1, MS2, and MS5) hybridized specifically with the target DNA, but MS5 was the most specific M. concilii oligonucleotide probe. Methanosarcina barkeri oligonucleotide probes (designated MB1, MB3, and MB4) hybridized with different Methanosarcina species. The MB4 probe specifically detected Methanosarcina barkeri, and the MB3 probe detected the presence of all mesophilic Methanosarcina species. These new oligonucleotide probes facilitated the identification, localization, and quantification of the specific relative abundance of M. concilii and Methanosarcina barkeri, which play important roles in methanogenesis. The combined use of fluorescent in situ hybridization with confocal scanning laser microscopy demonstrated that anaerobic granule topography depends on granule origin and feeding. Protein-fed granules showed no layered structure with a random distribution of M. concilii. In contrast, a layered structure developed in methanol-enriched granules, where M. barkeri growth was induced in an outer layer. This outer layer was followed by a layer composed of M. concilii, with an inner core of M. concilii and other bacteria.     

Studies of the Mature Pollen of Spinacia oleracea after Freeze Substitution and Observed with Confocal Laser Scanning Fluorescence Microscopy

The three-dimensional configuration of the nuclei of the trinucleate pollen grain of Spinacia oleracea L. has been examined by means of confocal laser scanning fluorescence microscopy (CLSM). It shows the presence of a male germ unit (MGU) in which all three nuclei are usually positioned in the periphery of the pollen grain. After freeze fixation and freeze substitution, the ultrastructure is better preserved than with standard chemical fixation. It shows the presence inside the pollen grain of mitochondria, dictyosomes, large starch-containing plastids, endoplasmic reticulum (ER), vacuoles and the MGU. In the sperm cells mitochondria, vesicles, dictyosomes and ER are also found. No microtubules were found in the grain and only very few inside the sperm cells. This is in contrast with earlier published results where fluorescent-labeled antibodies were used.     

Phylogenetic Composition, Spatial Structure, and Dynamics of Lotic Bacterial Biofilms Investigated by Fluorescent in Situ Hybridization and Confocal Laser Scanning Microscopy

Abstract The phylogenetic composition, three-dimensional structure and dynamics of bacterial communities in river biofilms generated in a rotating annular reactor system were studied by fluorescent in situ hybridization (FISH) and confocal laser scanning microscopy (CLSM). Biofilms grew on independently removable polycarbonate slides exposed in the reactor system with natural river water as inoculum and sole nutrient and carbon source. The microbial biofilm community developed from attached single cells and distinct microcolonies via a more confluent structure characterized by various filamentous bacteria to a mature biofilm rich in polymeric material with fewer cells on a per-area basis after 56 days. During the different stages of biofilm development, characteristic microcolonies and cell morphotypes could be identified as typical features of the investigated lotic biofilms. In situ analysis using a comprehensive suite of rRNA-targeted probes visualized individual cells within the alpha-, beta-, and gamma-Proteobacteria as well as the Cytophaga–Flavobacterium group as major parts of the attached community. The relative abundance of these major groups was determined by using digital image analysis to measure specific cell numbers as well as specific cell area after in situ probing. Within the lotic biofilm community, 87% of the whole bacterial cell area and 79% of the total cell counts hybridized with a Bacteria specific probe. During initial biofilm development, beta-Proteobacteria dominated the bacterial population. This was followed by a rapid increase of alpha-Proteobacteria and bacteria affiliated to the Cytophaga–Flavobacterium group. In mature biofilms, alpha-Proteobacteria and Cytophaga–Flavobacteria continued to be the prevalent bacterial groups. Beta-Proteobacteria constituted the morphologically most diverse group within the biofilm communities, and more narrow phylogenetic staining revealed the importance of distinct phylotypes within the beta1-Proteobacteria for the composition of the microbial community. The presence of sulfate-reducing bacteria affiliated to the Desulfovibrionaceae and Desulfobacteriaceae confirmed the range of metabolic potential within the lotic biofilms. Received: 24 September 1998; Accepted: 17 February 1999     

Fully Automatic Determination of Soil Bacterium Numbers, Cell Volumes, and Frequencies of Dividing Cells by Confocal Laser Scanning Microscopy and Image Analysis

We describe a fully automatic image analysis system capable of measuring cell numbers, volumes, lengths, and widths of bacteria in soil smears. The system also determines the number of cells in agglomerates and thus provides the frequency of dividing cells (FDC). Images are acquired from a confocal laser scanning microscope. The grey images are smoothed by convolution and by morphological erosion and dilation to remove noise. The background is equalized by flooding holes in the image and is then subtracted by two top hat transforms. Finally, the grey image is sharpened by delineation, and all particles above a fixed threshold are detected. The number of cells in each detected particle is determined by counting the number of local grey-level maxima in the particle. Thus, up to 1,500 cells in 10 fields of view in a soil smear are analyzed in 30 min without human intervention. Automatic counts of cell numbers and FDC were similar to visual counts in field samples. In microcosms, automatic measurements showed significant increases in cell numbers, FDC, mean cell volume, and length-to-width ratio after amendment of the soil. Volumes of fluorescent microspheres were measured with good approximation, but the absolute values obtained were strongly affected by the settings of the detector sensitivity. Independent measurements of bacterial cell numbers and volumes by image analysis and of cell carbon by a total organic carbon analyzer yielded an average specific carbon content of 200 fg of C (mu)m(sup-3), which indicates that our volume estimates are reasonable.     

Attachment of Escherichia coli O157:H7 to the Surfaces and Internal Structures of Apples as Detected by Confocal Scanning Laser Microscopy

Confocal scanning laser microscopy (CSLM) was used to demonstrate the attachment of Escherichia coli O157:H7 transformed with a plasmid encoding for green fluorescent protein (GFP) to the surface and within the internal structures of nonwaxed Red Delicious cv. apples. Apples at 2 or 25°C were inoculated with an E. coli O157:H7 cell suspension at 2 or 25°C. The effect of a negative temperature differential (cold inoculum, warm apple), a positive differential (warm inoculum, cold apple), and no differential (warm inoculum, warm apple), in combination with a pressure differential (atmospheric versus 10,130 Pa), on the attachment and infiltration of cells was determined. CSLM stereo images of external surfaces of apples subjected to all combinations of test parameters showed preferential cellular attachment to discontinuities in the waxy cuticle on the surface and to damaged tissue surrounding puncture wounds, where the pathogen was observed at depths up to 70 μm below the skin surface. Attachment to lenticels was sporadic but was occasionally observed at depths of up to 40 μm. Infiltration through the floral tube and attachment to seeds, cartilaginous pericarp, and internal trichomes were observed in all apples examined, regardless of temperature differential during inoculation. The pressure differential had no effect on infiltration or attachment of E. coli O157:H7. Image analysis to count cells at various depths within tissues was used to quantitatively compare the extent of infiltration into various apple structures as well as the effects of the temperature differential. Puncture wounds harbored greater numbers of the pathogen at greater depths than did other sites examined. Attachment or infiltration of cells was greater on the intact skin and in lenticels, russet areas, and the floral tube of apples inoculated under a negative temperature differential compared to those inoculated under no temperature differential. The results suggest that E. coli O157:H7 attached to internal core structures or within tissues of apples may evade decontamination treatments. Interventions designed to deliver disinfectants to these locations or to remove viable cells of E. coli O157:H7 and other pathogens from apples by other means need to be developed and validated.     

In Situ Microspatial Imaging Using Two-Photon and Confocal Laser Scanning Microscopy of Bacteria and Extracellular Polymeric Secretions (EPS) Within Marine Stromatolites

The combination of a hydrophilic embedding resin, Nanoplast, with fluorescent probes, and subsequent imaging using two-photon and confocal laser scanning microscopy (2P-LSM and CLSM) has allowed in imaging of the in situ microspatial arrangements of microbial cells and their extracellular polymeric secretion (EPS) within marine stromatolites. Optical sectioning by 2P-LSM and CLSM allowed imaging of endolithic cyanobacteria cells, Solentia sp., seen within carbonate sand grains. 2P-LSM allowed very clear imaging with a high resolution of bacteria using DAPI, which normally require UV excitation and reduced photo-bleaching of fluorescent probes.     

Vegetation abundance in lowland flood plan lakes determined by surface area, age and connectivity

SUMMARY 1. We analysed the vegetation structure of 215 lakes in the flood plain of the river Lower Rhine in relation to environmental variables related to hydrological connectivity, lake morphometry, lake age and land use on adjacent land. 2. The frequency distribution of the cover of submerged macrophytes was not normal, implying that submerged macrophytes in any one lake were either scarce or abundant. 3. We observed clear water lakes with submerged macrophyte dominance over a wide range of total P concentration (0.020–0.40 mg total P L^?1). 4. Multiple logistic regression indicated that the probability of dominance by submerged macrophytes decreased markedly with the surface area, depth and age of the lakes. The surface area effect occurred independently of the depth. Further, there was a negative relationship between submerged macrophyte dominance and the long‐term annual duration of inundation by the river. 5. Nymphaeid cover showed a distinct optimum with respect to mean lake depth, being almost absent in lakes shallower than 0.5 m. In contrast to what was found for submerged plants, the probability of occurrence of nymphaeids increased with lake age. 6. The probability of helophyte occurrence increased with lake age, and decreased with the presence of trees, cattle grazing, surface area, use of manure and mean lake depth. 7. In all cases the critical level of one factor (e.g. mean lake depth) depended on other factors (e.g. surface area or age of lake). Thus, in the present study, small lakes tended to remain dominated by submerged macrophytes up to a greater depth than large lakes, and helophytes colonised smaller lakes in an earlier phase. 8. The effect of inundation by the river was modest. This could be because most of our lakes are rarely inundated during the growing season and experience only moderate current velocities while flooded. 9. The results have practical implications for future management of flood plains for conservation purposes. In new water bodies, macrophyte domination will be promoted if many small shallow lakes, rather than few large deep ones, are excavated.     

A non-invasive fluorescent staining procedure allows Confocal Laser Scanning Microscopy based imaging of Mycobacterium in multispecies biofilms colonizing and degrading polycyclic aromatic hydrocarbons

To study the micro scale interactions of Mycobacterium with bacteria belonging to other genera by means of Confocal Laser Scanning Microscopy (CLSM), a procedure was developed to non-invasively and fluorescently stain Mycobacterium without compromising the signal produced by commonly used fluorescent reporter genes. The procedure makes use of the commercial non-specific nucleic acid stain Syto62 and was optimized to efficiently stain Mycobacterium cells in suspensions and biofilms. The staining procedure was found non-invasive towards overall cell viability, biofilm architecture and fluorescence signals emitted by other organisms expressing the fluorescent reporter genes gfp and dsRed. The procedure was successfully applied to visualize the comportment of the PAH-degrading Mycobacterium sp. VM552 in triple species biofilms containing, in addition to strain VM552, the GFP labeled PAH-degrading Sphingomonas sp. LH128-GFP and DsRed-labeled Pseudomonas putida OUS82(RF), and colonizing a glass substrate coated with phenanthrene crystals in flow chambers. CLSM imaging and subsequent appropriate image processing of the biofilms show that the comportment of strain Mycobacterium sp. VM552 was largely affected by the presence of the other organisms. The data support the value of the staining procedure to study ecological questions about micro scale behavior and niche occupation of Mycobacterium in multi-species systems.