三种紫球藻亲缘关系RAPD分析

利用RAPD技术对铜绿紫球藻（Porphyridium aerugineum 755）,淡色紫球藻（Porphyridium purpureum 806）和紫球藻（Porphyridium cruentum）的亲缘关系进行分析。从50个随机引物中筛选出25个种间多态性较强,重复性较好的引物。检测到233个位点。在233个条带中有186个多态性位点。多态位点比率为79．73％,平均每个引物扩增9个条带,多态性条带7个。聚类分析结果表明：铜绿紫球藻、淡色紫球藻和紫球藻之间的平均遗传距离为0．455,其中铜绿紫球藻和淡色紫球藻之间的遗传距离为0．413,铜绿紫球藻和紫球藻之间的遗传距离为0．556,淡色紫球藻和紫球藻之间的遗传距离最小为0．396。所以由RAPD试验的分析结果可以得出：三种紫球藻为独立的种,其中淡色紫球藻和紫球藻是亲缘关系较近的两个不同种。紫球藻属种间个体DNA多态性比较丰富,因此利用RAPD技术可以从DNA水平上检测紫球藻属种间差异。     

不同寄主来源寄生疫霉菌株的遗传变异分析

从300条RAPD随机引物中筛选出扩增多态性丰富的13条引物,对寄主来源不同的29个寄生疫霉（Phytophthora parasitica）菌株进行基因组DNA遗传变异分析。用筛选出的13条引物对供试菌株进行RAPD-PCR扩增,共产生139条RAPD条带,其中133条为多态性条带,多态检测率为95.7%。利用PopGene Version 1.31软件对供试菌株间的遗传距离进行聚类分析并构建系统树状图,供试29个菌株被划分为5个遗传聚类组,不同菌株间具有丰富的遗传变异。其中寄主为烟草(Nicotiana spp.)、腊梅(Chimonanthus praecox)、凤尾兰(Yucca gloriosa)和西番莲(Passiflora edulis)的菌株的遗传结构与其寄主来源具有明显的相关性,而寄主为刺槐(Sophora chinensis)和番茄(Lycopersicum esculentum)的菌株与其寄主来源的相关性较小,来源于不同寄主植物的菌株之间遗传距离较远。结果提示在寄生疫霉与其不同寄主植物的长期协同进化过程中,寄主对病原菌的遗传结构具有一定的影响。     

7种川产淫羊藿属植物遗传多样性及亲缘关系的ISSR分析

利用ISSR分子标记对7种12居群的川产淫羊藿属植物进行遗传多样性及亲缘关系分析。结果发现23个ISSR随机引物共扩增194条清晰条带,其中169条具多态性,平均多态性位点比率为87.11%,有效等位基因数Ne=1.534 2,Nei基因多样性指数H=0.314 4,Shannon多样性指数I=0.469 7,表明物种间遗传多样性丰富。7种川产淫羊藿属植物间的遗传相似系数为0.653 2～0.748 9,聚类分析和主成分分析直观的显示出12份供试材料间的亲缘关系,并将其分为两类。表明ISSR分子标记技术可以用于川产淫羊藿属植物的遗传多样性和亲缘关系分析。     

甜樱桃品种及其砧木的RAPD分析

利用RAPD技术,从130个随机引物中筛选出46个引物,对欧洲甜樱桃、欧洲酸樱桃、马哈利樱桃和野生中国樱桃4个类型樱桃种,以及欧洲甜樱桃与中国樱桃的种间杂交种共15个品种的基因组遗传变异进行分析。结果表明,46个随机引物均得到了稳定可重复的RAPD图谱,扩增出的DNA条带大小在100~2625bp之间,多态性位点数517个,多态性位点百分率为98.85%,每个随机引物扩增出的多态性DNA条带数在4~23条。品种间Nei遗传距离在0.166~0.479之间,平均遗传距离0.329;甜樱桃新品种‘秦樱1号’与‘秦岭玛瑙’、‘CDR-1’等10个樱桃砧木之间的遗传距离在0.248~0.376,并且根据遗传距离可以相互区分,所分析的15个樱桃品种均扩增出了特有的DNA条带,每个樱桃特有标记带在2~17个之间,共扩增出149个特有标记,据此可以进行樱桃品种及砧木的RAPD鉴定。研究认为利用RAPD技术可以在分子水平上对甜樱桃品种及其砧木进行快速鉴定。     

白花泡桐种源的遗传多样性和遗传分化研究

利用ISSR技术对白花泡桐38个种源的遗传多样性和遗传分化进行分析。结果显示：（1）从100个ISSR引物中筛选出9个能扩增出清晰带型并具多态性的引物,共扩增出95个条带,其中88条具多态性,多态位点比率为92.63%。（2）在物种水平上,有效等位基因数（N_e）、Nei’s基因多样性指数（H）、Shannon’s信息指数（I）的平均值分别为1.391 0、0.242 4、0.376 5;种源的多态位点比率在32.63%（江西抚州）~56.84%（广西梧州和江西九江）之间,平均为47.16%;基因流（N_m）为0.912 7,种源间遗传分化系数（G_st）为0.353 9,反映出种源间遗传变异占总遗传变异的35.39%,且遗传变异主要来源于种源内的个体间。（3）遗传一致度在0.39~0.82之间,反映出白花泡桐的遗传基础较宽。UPGMA法聚类分析将38个种源分为3组,主坐标分析(PCoA)将其大致分为4组,两种聚类方法的结果有一定的差异,本文做了相关讨论。研究还表明种源间的遗传距离与地理距离相关不显著。     

黄芩种质资源ISSR遗传多样性的分析及评价

采用ISSR分子标记技术对6个野生或栽培居群共147份黄芩种质进行遗传多样性分析和评价。分析结果表明,51个ISSR引物中筛选出18条扩增条带清晰、重复性好和多态性高的引物,共扩增出485条清晰的条带,其中466条具有多态性,平均多态性位点比率为96.08%,平均Nei’s基因多样性指数和Shannon’s信息指数分别为0.244 4和0.388 9,等位基因数（Na）和有效等位基因数（Ne）分别为1.993 8和1.383 9,遗传分化指数G_st=0.122 3,遗传一致度（I）和遗传距离（D）分别为0.951 5和0.050 1,说明收集的黄芩种质资源在总体上具有较高的遗传多样性,不同居群间存在一定的遗传分化和基因交流,遗传变异主要存在于居群内。分子聚类结果表明,同一地区的种质并没有按照收集来源完全聚类,可能与种质不同起源或民间栽培引种有关。在DNA分子水平揭示黄芩种质资源的遗传多样性水平,将为进一步黄芩种质资源评价、保存和新品种选育等利用提供依据。     

家蚕胚胎细胞系的DNA指纹图谱分析

在建立可靠的家蚕细胞系基因组DNA制备和PCR扩增技术体系的基础上,筛选具有稳定多态性位点的RAPD和ISSR引物,建立家蚕细胞系基因组DNA的ISSR和RAPD分子标记技术体系,检测家蚕细胞系的DNA分子标记多态性,构建细胞系的DNA指纹图谱。筛选出了26个ISSR引物和43个RAPD引物,通过PCR扩增在家蚕胚胎细胞系和传代昆虫细胞系等9个样品中分别获得了797条和1205条多态性条带,多态性达到89．9%和76．6%,不同细胞系的DNA多态性有较大差异,三个家蚕胚胎细胞系具有各自特有的DNA标记。测定了9个样品间的Nei's相似系数和遗传距离,构建了系统发育树,结果表明本实验室建立的3个家蚕胚胎细胞系和家蚕“夏芳×秋白”聚为一簇,亲缘关系较近,而来自不同物种的五个传代昆虫细胞系聚为一簇,它们之间的遗传距离比3个家蚕胚胎细胞系之间的遗传距离更小。     

茶园黑刺粉虱(Aleurocanthus spiniferus)种群的RAPD多样性

用RAPD技术对华东地区7个茶园的黑刺粉虱种群进行遗传结构分析。从40个随机引物中筛选出9条具特异性的引物,扩增出248条长度约为200~2000 bp的DNA条带,其中199条多态性条带,多态性为80.24 %。经Popgene软件分析,黑刺粉虱种群平均水平的多态位点百分比 (PPL) 为48.33 %, Nei’s 基因多样性 (HE) 为0.2910, Shannon’s多态性信息指数 (H) 为0.4442,表明黑刺粉虱种群遗传多样性丰富;各种群间遗传分化程度 (Gst) 较高,达0.3749,其中PPL以福建武夷山区的九龙山种群 (JLS) 最高,达77.42 %,其次为安徽九华山种群 (JHS) 的65.73 %;而且两种群的HE, H 等遗传指标均较高。以NTSYSpc软件包,基于Nei’s遗传距离对昆虫个体进行UPGMA和NJ法聚类分析,构建分子系统树,并进行多维标度分析 (MDS) 。系统树显示：同一种群的个体优先聚类,遗传相似度高的种群依次聚类。多维标度分析也显示：浙江杭州、富阳和绍兴3种群集中分布,安徽宣城种群靠近该3种群;而九华山种群则与武夷山区的九龙山种群聚拢;福建金山种群独立成簇。多维标度分析与聚类分析结果一致。认为粉虱种群间的遗传距离与地理距离之间存在相关性;两个山地种群的多样性有别于其它种群,是因为山地环境和气候引起粉虱适应性的生态地理分化。     

辣椒种质遗传多样性的RAPD和ISSR及其表型数据分析

用RAPDI、SSR分子标记及28个表型性状数据对辣椒属5个栽培种的13份材料进行了分析,结果表明:23条RAPD引物共扩增出209条带,平均每个引物扩增出9.09条,多态性位点比率为83.73%;16条ISSR引物共扩增出94条带,平均每个引物扩增出5.88条,多态性位点比率为79.79%.与RAPD相比,ISSR标记检测到的有效等位基因数(Ne)及Shannon多样性指数(I)、遗传离散度(Ht)和遗传分化系数(Gst)等遗传多样性参数都较大,多态性位点比例在亲缘关系较近的一年生辣椒(Capsicum annuum)种内较高,说明ISSR有更高的多态性检测效率,并且适合亲缘关系较近的种群间遗传多样性分析.基于RAPDI、SSR的聚类与基于表型数据的聚类之间存在极显著正相关,且都能将C.annuum与其它栽培种区分开来.     

小苍兰种质遗传多样性的ISSR分析

利用ISSR(Inter Simple Sequence Repeat)分子标记对12份小苍兰(Freesia refracta)种质进行了遗传多样性分析研究。从34条ISSR引物中筛选出了12条适宜的引物。这12条引物中每条引物可扩增出5~11条DNA片段,共扩增了96个条带,其中多态性片段62条,平均每条引物可产生5.2条多态性片段,多态性条带比率(PPB)为64.6%。经NTSYS-pc分析,12份小苍兰种质间的遗传距离(GD)的变化范围为0.123~0.907,平均为0.442。根据Nei’s相似系数建立了UPGMA聚类图,在相似系数为0.56时,可将紫色花系的小苍兰种质与其它种质分开,形成两个组。结果表明,ISSR分子标记可有效地分析小苍兰种质资源的遗传多样性和亲缘关系,为小苍兰的杂交育种和新品种保护提供理论基础。     

Kleine Mitteilungen über Flagellaten und Algen

Zusammenfassung Die 3 untersuchten Arten von Porphyridium bilden eine sehr natürliche Gattung. Sie stimmen in Zellbau, Fortpflanzung, gleitender Bewegungsart, Phototaxis und Ernährung durch Photosynthese fast ganz überein. Nach der Pigmentierung unterscheiden sich die roten Arten P. cruentum und P. violaceum (das also nicht veilchenblau ist!), welche durch Phycoerythrin gefärbt sind, von dem blaugrünen P. aerugineum, das seine Farbe dem Gehalt an Phycocyanin verdankt.Alle 3 Arten bedürfen zum Gedeihen eines dem Seewasser ähnlichen Salzgemisches; der günstigste Gehalt daran ist jedoch wenig scharf ausgeprägt. Während aber die 2 roten Arten bei etwa 1/2 der Nordsee-Konzentration am besten gedeihen, ist P. aerugineum auf etwa 1/10 derselben eingerichtet und kann sich auch ohne Seewasser vermehren.Bewegung und Lichtstrebigkeit kommen nur unter günstigen Lebensbedingungen voll zur Geltung.

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Short contributions on flagellates and algaeXV. To our knowledge of the genus Porphyridium (Rhodophyceae)

Summary The 3 species of Porphyridium investigated constitute a well defined natural genus. They are similar in: cell-structure, propagation, mode of locomotion by gliding, phototactic response, and nutrition by photosynthesis. With respect to pigmentation the 2 red species P. cruentum and P. violaceum (not violet coloured!) which contain phycoerythrin differ from the blue-green P. aerugineum owing its hue to phycocyanin.All 3 species require for thriving a certain amount of a saltmixture not too much differing from seawater. The optimum concentration is not sharply defined but much lower for P. aerugineum which, instead of about 1/2 the concentration of the sea, which the 2 other species prefer, likes best 1/10 of it and multiplies also without such addition.Locomotion and phototaxis are well observed only under favourable living conditions.

     

COMPARATIVE STUDIES IN THE GENUS PORPHYRIDIUM NAEG.1,2

Seven isolates of Porphyridium from 2 species were compared. P. cruentum Naeg. isolates were similar in size and pigmentation; differences were observed among the P. aerugineum Geit. isolates. Differences were detected among isolates in reproduction, rate of movement, growth rate, and sensitivity to CuSO₄ and crystal violet. No isolate grew heterotropically; however, growth differences were apparent on various carbon sources.     

STEROLS OF PORPHYRIDIUM(RHODOPHYTA)1,2

Species of the unicellular Porphyridium have been examined for their sterol content. Clones of 4 species maintained in axenic, chemically-defined culture were analyzed—these included P. sordidum Geitler, P. purpureum (Bory) Ross, P. aerugineum Geitler and P. violaceum Kormnann(P. griseum Geitler was not available to use for examination). The major sterol was 22-dehydrocholesterol in all except P. aerugineum in which there was a mixture of this sterol, cholesterol and higher sterols. Traces of C₂₈ and C₂₉ sterols were detected in most instances as well.     

A FREEZE-ETCHING STUDY OF THE RED ALGA PORPHYRIDIUM

Freeze-etched cells of Porphyridium cruentum and P. aerugineum closely resemble those fixed with glutaraldehyde and post-fixed with osmium tetroxide. Freeze-etching reveals diversity in the non-membranous and membranous parts of the cell. All the membranes are asymmetrical. The application of a double-replica technique illustrates how the two sides of several cell membranes fit together. Interpretation of fracture patterns through the thylakoids and stroma leads to the suggestion that the thylakoids are composed of repeating structural units. A model of the photosynthetic apparatus is proposed. It is suggested that the thylakoids of Porphyridium and other red algae are not always “free” but can be stacked much like those of other plants.     

东北地区部分大型藓类植物遗传多样性的RAPD研究

采用RAPD标记构建了东北地区20种大型藓类植物的系统关系。从200个随机引物中筛选出清晰且多态性高的7个引物,共产生了82条DNA片段,其中79条谱带具有遗传多态性,约占96.34%,平均每个引物扩增的DNA片段数为11.71条。采用NTSYS-pc数据分析软件,计算Nei氏相似性系数,建立了UPGMA聚类图。结果表明：以遗传相似性系数0.27为界限划分,可将20种苔藓植物分为二大类,即泥炭藓类和真藓类。以遗传相似性系数0.42为界限划分,可将20种苔藓植物划分为四大类群,即泥炭藓类、顶蒴单齿亚类、顶蒴双齿亚类和侧蒴双齿类。从整个聚类图可以看出,泥炭藓类是较原始的类群,而金发藓类是较进化的类群,这一结果和大多数苔藓植物经典分类系统相同。     

Chemotaxonomic notes on Porphyridium Näg. (Rhodophyta,Porphyridiales)

Abstract

The taxonomic attribution of Porphyridium Näg. to Rhodophyta is a question from a long time debated since Porphyridium lacks both the morphological and the reproductive features of the red algae.

In the present paper we report the presence of floridosides and γ-linolenic acid in P. aerugineum and P. cruentum. Both these compounds are believed to be useful in the elucidation of the rhodophycean phylogeny; thus we support the attribution of Porphyridium to Rhodophyta.

Phylogenetic relationships between Porphyridium and other red algae are discussed.     

红皮云杉与嫩江云杉RAPD和ISSR分子标记反应体系优化和特异性检测

以红皮云杉和嫩江云杉为材料,采用现代分子标记技术-RAPD和ISSR标记研究红皮云杉与嫩江云杉间在基因组水平上的遗传差异。通过正交试验设计筛选RAPD和ISSR反应程序和反应体系。从近100个引物中筛选出3个RAPD引物和一个ISSR引物用来区分红皮云杉和嫩江云杉,它们分别是OPN07、OPA17、S25和ISSR67。用这4个引物扩增两种云杉基因组DNA,分别在1 000,950,1 500,2 000 bp处嫩江云杉有特异性谱带而红皮云杉没有。研究表明,采用RAPD和ISSR分子标记可以将红皮云杉和嫩江云杉在分子水平上加以区分,为今后进一步阐明云杉的系统进化,物种鉴定和种间杂交育种提供了理论依据。     

A closed system for outdoor cultivation of Porphyridium

Experience accumulated during the past few years indicates that the main problems in the large-scale cultivation of algae in open ponds are low productivity and contamination. Thus, the use of closed systems can be an alternative method of cultivation. In the present study, a closed system made of polyethylene sleeves was compared with open ponds with respect to growth and polysaccharide production of two species of Porphyridium: Porphyridium sp. and P. aerugineum. For both species, cell number, biomass, and polysaccharide production were higher in the sleeves than in the ponds. It seems that polyethylene sleeves have the following advantages over open ponds: high light availability, high rate of heating and cooling, improved turbulence, relative lack of contamination, and prevention of evaporation and hence of fluctuation in salinity.     

Comparative properties of ferredoxins from a marine and freshwater species of Porphyridium

Ferredoxins were isolated from the freshwater red alga Porphyridium aerugineut, and from Porphyridium cruentum, a related marine species. A sin     

The extracellular polysaccharides of porphyridium cruentum and porphyridium aerugineum

The extracellular mucilages from Porphyridium cruentum and P. aerugineum contain D-xylose, D-glucose, D-and L-galactose, 3-O-methylxylose, 3- and 4-O-methyl-galactose, and D-glucoronic acid in the approximate molar proportions of 3:1:2.5:0.13:0.13:0.8 and 1.7:1:1.1:0.3:0.6:0.5, respectively. In addition, P cruentum mucilage contains 2-O-methylhexose (0.13) and 2-O-methylglucuronic acid (0.2), whereas P. aeruginum mucilage is devoid of these two sugars but contains 2,4-di-O-methylgalactose (0.5). Both polysaccharides contain ～10% of half-ester sulphate and appear to be linked to ～5% of protein. Attempted fractionation into homopolysaccharides was unsuccessful. Methylation, periodate oxidation, and partial hydrolysis studies revealed that the glucuronic acid is 1,3-linked and is attached solely to O–3 of D-galactose in both mucilages. The 2-O-methylglucuronic acid in P. cruentum is linked to O–4 of L-galactose. Xylose, glucose, and galactose are present in both mucilages as end groups, and 1,3- and 1,4-linked residues, with galactose and glucose also present as, 1,3,4-linked or sulphated residues. Molecular weight determinations on Sepharose 4B indicate a $\text{M}$_w of 4 x 10(su6) for P. cruentum mucilage and 5 x 10⁶ for that from P. aerugineum.