Genome mapping of the silver fox. I. Determination of the chromosomal location of 8 fox genes and the search for homologous regions on fox and human chromosomes

Twenty-three silver fox-Chinese hamster somatic cell hybrids were analysed for the expression of fox enzyme loci and the segregation of fox chromosomes. This analysis made it possible to assign the gene PGD to chromosome 2, MDH2 to chromosome 3. NP to chromosome 10. APRT, ENO1, PGM1 to chromosome 12, MDH1 and IDH1 to chromosome 16. Possible use of the above-mentioned clone panel for fox gene mapping is analysed. An attempt to reveal homologous regions on fox and human chromosomes was made by comparative analysis of prometaphase fox and human chromosomes containing the homologous genes. The means and perspectives of verification of the hypothesis proposed are discussed.     

Genome mapping in silver fox. Syntenic genes in Carnivora

Hamster X fox somatic cell hybrids segregating individual fox chromosomes in different combinations were used to assign seven structural loci to fox chromosomes. The gene for ME1 was mapped on the VFU1 chromosome, the genes for ADK and PP being located on the VFU4 chromosome. The gene for GSR was assigned to the VFU7 chromosome and the genes for MPI and COT1 were assigned to the VFU15 chromosome. Localization of these genes enhances the established fox genetic map and extends the known syntenic homologies between the fox and other mammalian. The comparison of data on gene mapping has provided basis for suggestion that there are significant differences in rates of karyotypic evolution in many mammalian taxa.     

黑眶蟾蜍、黑斑蛙、中国雨蛙不同地理居群的染色体多样性

本文研究温州地区的黑眶蟾蜍、黑斑蛙、中国雨蛙的核型,分析了三个地理居群的黑星期五蟾蜍、四个地理居群的黑斑蛙、三个地理居群的中国雨蛙核型。结果表明不同地理居群的同种蛙有相同的染色体数和核型模式。黑星期五蟾蜍为2n＝22,NF＝44,核模式6＋5;黑斑蛙为2n=26,NF=52,核模式5＋8;中国雨蛙为2n＝24,NF＝48,核模式6＋6。但同一种蛙的不同地理居群之间在SM数目和顺序、次缢痕或随体的位置等有所不同。说明不同地理居群的同种蛙的染色体具有丰富的多样性。     

Speciation via hybrid dysgenesis: negative evidence from the Drosophila affinis subgroup

Differences in karyotypic structure are compared with reported isozyme differences in three Mediterranean species of Patella. In addition, the karyotypic structure of Patella is discussed in terms of the karyotypic variability of Archaeogastropoda. Both P. lusitanica and P. caerulea have a haploid complement of n=9 (6 metacentric, 1 submetacentric, 1 subtelocentric, 1 telocentric chromosome in P. lusitanica and 6 metacentric, 1 submetacentric, 2 telocentric chromosome in P. caerulea). P. aspera, although regarded as morphologically more closely related to P. caerulea, has a haploid complement of only n=8 (7 metacentric and 1 submetacentric chromosomes).     

Karyotypic variability in Iheringichthys labrosus (Teleostei, Pimelodidae) from the Tibagi River basin (Paraná State, Brazil)

Cytogenetic analyses were carried out in a populational sample of Iheringichthys labrosus from the Guaraúna River (Upper Tibagi River; Paraná State, Brazil) in order to provide a karyotypic comparison with another previously studied population from the Lower Tibagi River, characterized by the presence of 32m + 8sm + 6st + 10a (2n = 56, FN = 102) and occurrence of supernumerary chromosomes (80% of individuals). The 17 specimens of I. labrosus (6 females, 10 males and 1 of unknown sex) from the Upper Tibagi River showed 2n = 56 chromosomes, a karyotype formula of 14m + 32sm + 4st + 6a (FN = 106), without evidence of sex chromosome heteromorphism or supernumerary chromosomes. The heterochromatin was detected at telomeric and centromeric positions in several chromosomal pairs. The Ag-nucleolar organizer regions were heteromorphic and located at terminal position on short arms of the 16th chromosomal pair, suggesting a positive association with heterochromatic regions. The inter-populational karyotypic differentiation reported indicates distinct evolutionary pathways within I. labrosus in the Tibagi River basin.     

Genetic basis of the major malate dehydrogenase isozymes in maize

The mitochondrial MDH isozymes in the scutellum of the mature maize (Zea mays L.) kernel are encoded by three independently inherited nuclear genes. Mdh1 is located on chromosome 8, close to the breakpoint (8L.35) of a waxy-marked reciprocal translocation between chromosomes 8 and 9. Mdh2 is located in the distal region of the long arm of chromosome 6. Mdh3 is on the long arm of chromosome 3, approximately 2.6 map units from sh2. A modifier of the mitochondrial MDH isozymes (Mmm) maps approximately 27.5 units proximal to Adh1 in the central portion of the long arm of chromosome 1. Independently assorting duplicate genes code for the soluble MDH isozymes. Mdh4 is located in the same region of chromosome 1 as Mmm, approximately 29 map units proximal to Adh1. Mdh5 maps approximately 20 units distal to a2 in the short arm of chromosome 5.——Intergenic and interallelic heterodimer formation occurs among gene products that occupy the same subcellular compartment. MDH isozymes were purified and analyzed by native-SDS two-dimensional polyacrylamide gel electrophoresis. The proposed mitochondrial MDH intergenic heterodimer bands were found to be composed of two subunits, which differ in their migrations on SDS gels; whereas, genetically defined homodimers contained only one type of subunit.——This evidence is discussed in terms of two genetic models proposed for the maize mitochondrial MDH isozymes.     

Mapping of silver fox genes: chromosomal localization of the genes for GOT2, AK1, ALDOC, ACP1, ITPA, PGP, and BLVR.

Evidence is presented for the chromosome localization of seven silver fox genes by the use of a panel of fox x Chinese hamster somatic cell hybrids. AK1, GOT2, and ALDOC are assigned to chromosome VFU2, PGP to chromosome VFU38, BLVR to chromosome VFU5, ACP1 to chromosome VFU8, and ITPA to chromosome VFU14. The genetic map of 29 fox genes is compared with those reported for man and other mammals. The results we obtained support and extend our previous suggestion that the formation of the Canidae branch of the Carnivora phylogenic tree was associated with a great increase in the rate of reorganization of the ancestral karyotype.     

Mapping of the silver fox genome. III. Determination of the chromosomal localization of the GOT2, AK1, ALDOC, ACP1, ITPA, PGP and BLVR genes

Evidence is presented for the chromosome localization of seven silver fox genes obtained with the help of panel of fox x Chinese hamster somatic cell hybrids. Thus, the AK1, GOT2 and ALDOC are assigned to chromosome VFU2, PGP to chromosome VFU3, BLVR to chromosome VFU5, ACP1 to chromosome VFU8 and ITPA to chromosome VFU14. The genetic map of 29 fox genes is compared with those reported for man and other animals. The results obtained support and extend our previous suggestion that formation of the Canidae branch of the Carnivora phylogenetic tree was associated with great increase in the rate of reorganization of the ancestral karyotype.     

湘华鲮(♂)×鲮鱼(♀)杂交一代与其双亲染色体组型的比较研究

三种鱼的二倍体数目完全相同,均为2n=50。三种鱼的核型差异较大,尤其是双亲间的组型在形态上有明显的差异。然而杂交一代的m、sm二组染色体的组型却十分接近母体,这二组的染色体数占了全部染色体总数的88%。杂交一代染色体组型中的st和t二组染色体虽与双亲有所不同,但与双亲中这二组染色体组型的差异来比要小一些。三种鱼的中期分裂相中,未曾发现带有随体的染色体,也未发现与性别有关的异型染色体的存在。       

Allelic expression in intergeneric fox hybrids (Alopex lagopus × Vulpes vulpes). III. Regulation of the expression of the parental alleles at the Gpd locus linked to the X chromosome

The electrophoretic pattern of glucose-6-phosphate dehydrogenase (G6PD) was studied in 60 intergeneric fox hybrids (Alopex lagopus × Vulpes vulpes), 33 females and 27 males. It is shown that the structural gene for G6PD, designated Gpd, is located on the X chromosome in both Arctic and silver foxes. Analysis of G6PD patterns in the erythrocytes of hybrid females demonstrated that the phenotypic expression of parental alleles at the Gpd locus varied considerably: from 1:1 to the hemizygous manifestation of an allele of either the Artic or the silver fox. The expression of the parental allels at this locus is different in the various tissues of single female hybrids. It is suggested that the variable quantitative expression of the alleles at the Gpd locus in hybrid females is related to the presence of two cell populations having in an active state either the X chromosome of the Arctic fox or that of the silver fox. It is also proposed that the size of the two cell populations is largely affected by the different relationships between cells having different activated X-chromosomes among initiator (stem) cells from which various definitive organs and tissues develop. The number of initiator cells for erythroid tissue has been calculated to be five or six.     

广西广义山蚂蝗属部分种类的核型及染色体数目报道

本文分析了广义山蚂蝗属６种１变种的核型,并报道了９种１亚种的染色体数目。假地豆Ｄｅｓｍｏｄｉｕｍｈｅｔｅｒｏｃａｒｐｏｎ（Ｌ．）ＤＣ．,伏毛假地豆Ｄ．ｈｅｔｅｒｏｃｏｒｐｏ。（Ｌ．）ＤＣ．ｖａｒ．ｓｔｒｉｇｏｓｕｍｖａｎＭｅｅｕｗｅｎ,单叶假地豆Ｄ．ｒｕｂｒｕｍ（Ｌｏｕｒ．）ＤＣ．．金钱草Ｄ．ｓｔｙｒａｃｉｆｏｌｉｕｍ（Ｏｓｂｅｃｋ．）Ｍｅｒｒ．及假木豆Ｄｅｎｄｒｏｌｏｂｉｕｍｔｒｉａｎｇｕｌａｒｅ（Ｒｅｔｚ．）Ｓｃｈｉｎｄｌ．的核型均为Ｋ（２ｎ）＝２２＝２２ｍ,属１Ａ类型．但它们的染色体相对长度变化范围有一定的差异,假木豆的较大,假地豆的较小。舞草Ｃｏｄｏｒｉｏｃａｌｙｘｍｏｔｏｒｉｕｓ（Ｈｏｕｔｔ．）Ｏｈａｓｈｉ和圆叶舞草Ｃ．ｇｙｒｏｉｄｅｓ（Ｒｏｘｂ．ｅｘＬｉｎｋ．）Ｈａｓｓｋ．的核型为Ｋ（２ｎ）＝２２＝２２ｍ,有的细胞可见随体染色体,属１Ｂ类型．根据核型资料比较．作者发现狭义的舞草属比狭义的山蚂螟属和假木豆属较为进化。本文还报道大叶山蚂蝗ＤｅｓｍｏｄｉｕｍｌａｘｉｆｌｏｒｕｍＤＣ,波叶山蚂蝗Ｄ．ｓｅｑｕａｘＷａｌｌ．绒毛山蚂蝗Ｄ．ｖｅｌｕｔｉｎｕｍ（Ｗｉｌｌｄ．）ＤＣ,异叶山绿豆Ｄ．ｈｅｔｅｒｏｐｈ?     

泽蛙、日本林蛙、饰纹姬蛙不同地理居群的核型多样性

本文研究了温州地区的泽蛙、日本林蛙、饰纹姬蛙的核型,并分析了9个地理居群泽蛙的核型、4个地理居群日本林蛙的核型和3个地理居群饰纹姬蛙的核型。结果表明,不同地理居群的同种蛙均有相同的染色体数和核型模式。泽蛙、日本林蛙都为 2n=26,NF=52,核模式5＋8;饰纹姬蛙 2n=24,NF=48,核模式6＋6。但同一种蛙的不同地理居群之间在SM数目和顺序、次缢痕或随体的位置等都有所不同,说明不同地理居群的同种蛙的染色体具有丰富的多样性。故保护蛙品种资源多样性,不仅要从整个群体上考虑,而且要针对每个品种（或类群）进行保护。 Abstract：The karyotypes of Rana limmocharis boie,Rana j.Japonica,and Microhyla ornata from Wenzhou were studied.The karyotypes of nine populations of Rana limmocharis boie,four populations of Rana j.Japonica and three populations of Microhyla ornata from different geographical regions were compared.The results demonstrated that the same species of different geographical populations have the same amount of chromosome and karyotypic formulae. Rana limmocharis boie and Rana j.Japonica have 2n=26,NF=52 and 5＋8 karyotypic formulae.Microhyla ornata has 2n=24,NF=48 and 6＋6 karyotypic formulae.But some dissimilarities were found among them.First,the number and sequence of submetacentric chromosome were different among them,and then the secondary contriction （SC）or satellite （Sat）were also different.It was showed that the chromosomes of same species of different geographical population have diversities.Conservation of frog genetic diversity must be considered of not only the genetic diversity conservation of the total frog population but also that of every frog breed.     

Creation of a clone panel of fox x Chinese hamster somatic cell hybrids and chromosome mapping of genes for LDHA, LDHB, GPI, ESD, G6PD, HPRT, alpha-GALA in the silver fox

A clone panel of fox-hamster somatic cell hybrids which can be used for fox gene mapping was set up. Analysis of patterns of chromosome-enzyme segregation made it possible to assign gene GPI to chromosome 1, LDHA to chromosome 11, LDHB to chromosome 8, ESD to chromosome 6 and G6PD, HPRT, alpha-GALA to chromosome X.     

Polymorphism and chromosomal location of the MC4R (melanocortin-4 receptor) gene in the dog and red fox

The melanocortin-4 receptor (MC4R) is expressed in the hypothalamus and regulates energy intake and body weight. In silico screening of the canine chromosome 1 sequence and a comparison with the porcine MC4R sequence by BLAST were performed. The nucleotide sequence of the whole coding region and 3'- and 5'-flanking regions of the dog (1214 bp) and red fox (1177 bp) MC4R gene was established and high conservation of the nucleotide sequences was revealed (99%). Five sets of PCR primers were designed and a search for polymorphism was performed by the SSCP technique in a group of 31 dogs representing nineteen breeds and 35 farm red foxes. Sequencing of DNA fragments, representing the identified SSCP patterns, revealed three single nucleotide polymorphisms (including a missense one) in dogs and four silent SNPs in red foxes. An average SNP frequency was approx. 1/400 bp in the dog and 1/300 bp in the red fox. We mapped the MC4R gene by FISH to the canine chromosome 1 (CFA1q1.1) and to the red fox chromosome 5 (VVU5p1.2).     

Of rabbit and man: Comparative gene mapping

Summary Nineteen cell hybrids were obtained by fusing rabbit (Oryctolagus cuniculus, OCU) fibroblasts and a Chinese hamster cell line HGPRT. Eleven enzymatic markers were investigated for cosegregation analysis. Seven could be assigned to OCU chromosomes: LDHA to OCU1; LDHB and TPI to OCU4; PEPB, NP, and ITP to OCU16; and G6PD to OCUX. Two assignments were considered possible: MDH2 to OCU15, and GUK to OCU3 or 15. Two could not be assigned: MDH1 and PGD. These results are consistent with the OCU-HSA chromosome homocologies previously reported, except for PEPB.     

Confirmed assignments of 15 structural gene loci to chromosomes of four owl monkey karyotypes

Fifteen gene loci for constitutive enzymes previously localized to specific owl monkey chromosomes of karyotypes III, V, and VI are confirmed by their assignments to homologous chromosomes of owl monkey karyotypes I, II, IV, and VII. The syntenic mapping of LDHA and GPI on a large metacentric, II-2, and the separate assignment of these two loci to two acrocentrics, I-9 and I-15, provide genetic evidence supporting the proposed fusion-fission event that characterized the karyotypic difference between owl monkeys inhabiting Colombia and the Panama Canal Zone. Moreover, the proposed hypothesis on chromosome polymorphism among the Colombian owl monkeys with karyotypes II, III, and IV, resulting from a fusion-fission event involving one metacentric and two subtelocentric pairs, is supported by the assignment of LDHB and MDH1 to the large metacentric I-2 and the separate localization of these two gene loci to II-13 and II-14, respectively.     

Cytogenetics of Alismatales s.s.: chromosomal evolution and C-banding

Ten species of Alismatales, five of Alismataceae, four of Limnocharitaceae and one of Hydrocharitaceae were studied with regard to chromosome number, chromosome morphology, and pattern of Giemsa C-bands. The genus Echinodorus had a diploid chromosome number of 22 for all species that were analyzed and a karyotypic formula of 2m + 20a. For the family Limnocharitaceae, Hydrocleys nymphoides had a diploid chromosome number of 16, Hydrocleys martii (4m + 2sm + 10a) had a diploid chromosome number of 16, Limnocharis flava had a diploid chromosome number of 20 and L. laforestii (4m + 16a) had a diploid chromosome number of 20. The only species of Hydrocharitaceae that was studied exhibited a karyotype that consisted of a diploid chromosome number of 28 and a karyotypic formula of 4m + 6sm + 4a. The distribution pattern of the C-banded karyotype in Echinodorus showed four blocks of constitutive heterochromatin in two smaller acrocentric pairs that corresponded to the heterochromatic NORs. In E. lanceolatus, 14 bands in the termini of the arms beyond the heterochromatic NORs of seven acrocentric pairs were also observed. Idiograms are presented and the karyotypic evolution patterns for the studied groups are discussed.     

New gene assignments in the rabbit (Oryctolagus cuniculus). Comparison with other species

Nineteen cell hybrids were obtained by fusing rabbit (Oryctolagus cuniculus, OCU) fibroblasts and a Chinese hamster cell line HGPRT-. Eleven enzymatic markers were previously investigated (Soulié and Grouchy 1982); seven of these could be assigned (LDHA, LDHB, TPI, PEPB, NP, ITP, and G6PD). Two assignments were uncertain (MDH2 and GUK). Two markers could not be assigned (MDH1 and PGD). Seven further markers were investigated and are the subject of this report. Six could be assigned: GALT to chromosome OCU1, GAPD to OCU4, GPX and ACY to OCU9, PGM1 to OCU13, and GSR to OCU19. One could not be assigned (GPI). MDH2 and GUK were previously considered uncertain. Now MDH2 was found impossible to assign and GUK was mapped on OCU15. These assignments were compared with those known in man, Cebus capucinus, Microcebus murinus, cat, and mouse. It was impossible to assign any enzymatic marker belonging to the ten linkage groups known in the rabbit. The esterase locus could not be investigated since the rabbit enzyme migrates in the same position as the hamster enzyme.     

澳大利亚三种Callitris植物的核型及其系统学意义

对澳大利亚特产的Ｃａｌｌｉｔｒｉｓ属植物Ｃ．ｐｒｅｉｓｓｉｉ,Ｃ．ｖｅｒｒｕｃｏｓａ,Ｃ．ｅｎｄｌｉｃｈｅｒｉ（柏科）的核型进行了分析,后２种的为首次报道。它们的核型公式分别为Ｋ（２ｎ）＝２２＝２２ｍ（２ＳＡＴ）,２２ｍ（２ＳＡＴ）和２２ｍ（６ＳＡＴ）,均属１Ａ核型类型。染色体相对长度组成同是２ｎ＝２２＝１０Ｍ＿２＋１２Ｍ＿１该３种及其他８种Ｃａｌｌｔｒｉｓ属植物一致的核型Ｋ（２ｎ）＝２２ｍ和１Ａ类型的通常被认为是最对称和原始的。因此该属在柏科的系统发育上也许处于相当原始的地位。     

Association of MC3R gene polymorphisms with body weight in the red fox and comparative gene organization in four canids

There are five genes encoding melanocortin receptors. Among canids, the genes have mainly been studied in the dog (MC1R, MC2R and MC4R). The MC4R gene has also been analysed in the red fox. In this report, we present a study of chromosome localization, comparative sequence analysis and polymorphism of the MC3R gene in the dog, red fox, arctic fox and Chinese raccoon dog. The gene was localized by FISH to the following chromosome: 24q24‐25 in the dog, 14p16 in the red fox, 18q13 in the arctic fox and NPP4p15 in the Chinese raccoon dog. A high identity level of the MC3R gene sequences was observed among the species, ranging from 96.0% (red fox – Chinese raccoon dog) to 99.5% (red fox – arctic fox). Altogether, eight polymorphic sites were found in the red fox, six in the Chinese raccoon dog and two in the dog, while the arctic fox appeared to be monomorphic. In addition, association of several polymorphisms with body weight was analysed in red foxes (the number of genotyped animals ranged from 319 to 379). Two polymorphisms in the red fox, i.e. a silent substitution c.957A>C and c.*185C>T in the 3′‐flanking sequence, showed a significant association (P < 0.01) with body weight.