The anatomy of the interspecific abundance–range size relationship for the British avifauna: II. Temporal dynamics

In a companion paper, we started an examination of the anatomy of the interspecific relationship between local abundance and geographical range size in the British avifauna by analysing its spatial dynamics. Here, we use the same data to extend this study to a consideration of the temporal dynamics of the relationship. Most species of British breeding bird show a positive intraspecific abundance–range size relationship through time: i.e. in years when a species is locally more abundant it also occupies a higher proportion of census sites. However, the majority of such relationships are not statistically significant, and other relationships that are statistically significant are negative. Therefore, intraspecific abundance–range size relationships do not simply mirror the relationship across species. Where they do arise, positive relationships are more likely to be associated with positive intraspecific relationships between range size and maximum rather than minimum abundance. The interspecific abundance–range size relationship is remarkably consistent across years, and is always significantly positive. The relationships for woodland and farmland census sites show correlated variation, so that in years when the linear regression slope and coefficient of determination are high across species on farmland plots, they also tend to be high across species on woodland plots. Common species tend to be common on both farmland and woodland plots, and tend to be common in all years. Likewise, rare species tend to be rare in all habitats and years. This concordance means that the positive interspecific abundance–range size relationship can be viewed as occurring largely independently of intraspecific relationships. It follows from the above that developing an understanding of intraspecific abundance–range size relationships may be of only limited value in ascertaining the determinants of positive interspecific abundance–range size relationships. We conclude that for interspecific relationships, it will be important to know why some species are consistently common and others rare, whereas for intraspecific relationships it will be important to understand the dynamic links between local abundances across sites.     

More and more generalists: two decades of changes in the European avifauna

Biotic homogenization (BH) is a process whereby some species (losers) are systematically replaced by others (winners). While this process has been related to the effects of anthropogenic activities, whether and how BH is occurring across regions and the role of native species as a driver of BH has hardly been investigated. Here, we examine the trend in the community specialization index (CSI) for 234 native species of breeding birds at 10 111 sites in six European countries from 1990 to 2008. Unlike many BH studies, CSI uses abundance information to estimate the balance between generalist and specialist species in local assemblages. We show that bird communities are more and more composed of native generalist species across regions, revealing a strong, ongoing BH process. Our result suggests a rapid and non-random change in community composition at a continental scale is occurring, most likely driven by anthropogenic activities.     

Navigating north: how body mass and winds shape avian flight behaviours across a North American migratory flyway

The migratory patterns of birds have been the focus of ecologists for millennia. What behavioural traits underlie these remarkably consistent movements? Addressing this question is central to advancing our understanding of migratory flight strategies and requires the integration of information across levels of biological organisation, e.g. species to communities. Here, we combine species‐specific observations from the eBird citizen‐science database with observations aggregated from weather surveillance radars during spring migration in central North America. Our results confirm a core prediction of migration theory at an unprecedented national scale: body mass predicts variation in flight strategies across latitudes, with larger‐bodied species flying faster and compensating more for wind drift. We also find evidence that migrants travelling northward earlier in the spring increasingly compensate for wind drift at higher latitudes. This integration of information across biological scales provides new insight into patterns and determinants of broad‐scale flight strategies of migratory birds.     

Understanding ecological change across large spatial,temporal and taxonomic scales: integrating data and methods in light of theory

The difficulty of integrating multiple theories, data and methods has slowed progress towards making unified inferences of ecological change generalizable across large spatial, temporal and taxonomic scales. However, recent progress towards a theoretical synthesis now provides a guiding framework for organizing and integrating all primary data and methods for spatiotemporal assemblage‐level inference in ecology. In this paper, we describe how recent theoretical developments can provide an organizing paradigm for linking advances in data collection and methodological frameworks across disparate ecological sub‐disciplines and across large spatial and temporal scales. First, we summarize the set of fundamental processes that determine change in multispecies assemblages across spatial and temporal scales by reviewing recent theoretical syntheses of community ecology. Second, we review recent advances in data and methods across the main sub‐disciplines concerned with ecological inference across large spatial, temporal and taxonomic scales, and organize them based on the primary fundamental processes they include, rather than the spatiotemporal scale of their inferences. Finally, we highlight how iteratively focusing on only one fundamental process at a time, but combining all relevant spatiotemporal data and methods, may reduce the conceptual challenges to integration among ecological sub‐disciplines. Moreover, we discuss a number of avenues for decreasing the practical barriers to integration among data and methods. We aim to reconcile the recent convergence of decades of thinking in community ecology and macroecology theory with the rapid progress in spatiotemporal approaches for assemblage‐level inference, at a time where a robust understanding of spatiotemporal change in ecological assemblages is more crucial than ever to conserve biodiversity.     

The consistency and stability of abundance-occupancy relationships in large-scale population dynamics

1. Abundance-occupancy relationships comprise some of the most general and well-explored patterns in macro-ecology. The theory governing these relationships predicts that species will exhibit a positive interspecific and intraspecific relationship between regional occupancy and local abundance. Abundance-occupancy relationships have important implications in using distributional surveys, such as atlases, to understand and document large-scale population dynamics and the consequences of environmental change. A basic need for interpreting such data bases is a better understanding of whether changes in regional occupancy reflect changes in local abundance across species of varying life-history characteristics. 2. Our objective was to test the predictions of the abundance-occupancy rule using two independent data sets, the New York State Breeding Bird Atlas and the North American Breeding Bird Survey. The New York State Breeding Bird Atlas consists of 5332 25-km(2) survey blocks and is one of the first atlases in the USA to be completed for two time periods (1980-85 and 2000-05). The North American Breeding Survey is a large-scale annual survey intended to document the relative abundance and population change of songbirds throughout the USA. 3. We found that regional occupancy was positively correlated with relative abundance across 98 (beta = 0.60 +/- 0.11 SE, P < 0.001, R(2) = 0.60) and 85 species (beta = 0.67 +/- 0.06 SE, P < 0.001, R(2) = 0.57) in two separate time periods. This relationship proved stable over time and was notably consistent between breeding habitat groups and migratory guilds. 4. Between 1980 and 2005, changes in regional occupancy were highly correlated with long-term abundance trend estimates for 75 species (beta = 5.73 +/- 0.24 SE, P < 0.001, R(2) = 0.88). Over a 20-year period, woodland and resident birds showed an increase in occupancy while grassland species showed the greatest decline; these patterns were mirrored by changes in local abundance. 5. Although exceptions existed, we found most changes in occupancy parallel changes in local abundance. These findings support the basic predictions of the abundance-occupancy rule and demonstrate its consistency and stability in species and groups of varying life-history characteristics.     

Patterns in the abundance and distribution of ichneumonid parasitoids within and across habitat patches

Abstract 1. Knowing how species are distributed across a landscape can considerably aid the management of populations and species richness. Insect parasitoids constitute a large fraction of terrestrial biodiversity and help regulate other insect populations, but their ecology is poorly known at a landscape scale. 2. Using Malaise traps distributed first extensively and then intensively across woodland patches in an agricultural landscape, we tested whether four ichneumonid subfamilies display (i) a positive relationship between abundance and occupancy, (ii) a positive relationship between abundance in the extensive sample and abundance in the intensive sample, and (iii) aggregation across traps. 3. A positive relationship between abundance and occupancy was found across species in both samples, and was relatively strong. Abundance in the extensive samples was positively correlated with abundance in the intensive samples. On average, species were aggregated in both samples, although aggregation was not necessary for a positive abundance–occupancy relationship. 4. These results suggest that ichneumonid species can largely be classified on a continuum from widespread and locally abundant to localised and locally scarce. The former species allow the potential for pervasive natural control of host populations. The latter species, which constitute a substantial majority of the species list, will be vulnerable to extinction through both stochastic forces and widespread adverse forces such as climate change and habitat modification. However, the assessment of species’ status is likely to be facilitated by the positive abundance–occupancy relationship. 5. Species inventories for ichneumonids will be taxing because of the need to sample both intensively and extensively to detect rare species, which constitute the majority of species. However, it is possible to generalise species abundances across spatial scales and years, facilitating monitoring.     

Consequences of forest fragmentation for the dynamics of bird populations: conceptual issues and the evidence

This paper reviews the consequences of forest fragmentation for the dynamics of bird populations. Owing to high mobility and large home ranges, birds usually perceive fragmented forests in a finegrained manner, i.e. embrace several forest fragments in functional home ranges. On a regional scale, however, coarse-grained clusters of fine-grained fragments (hierarchical fragmentation may sub-divide bird populations into isolated demes, which enter a domain of metapopulation dynamics. Distinctions are made between pure distance-area or population-level effects and more indirect community-level effects due to changes in landscape composition. Distance-area effects, such as insularization and decreasing fragment size, directly prevent dispersal and reduce population size. Landscape effects, such as reduced fragment-matrix and interior-edge ratios, increase the pressure from surrounding predators, competitors, parasites and disease. In short, forest fragmentation can be viewed as a two-step process. Initially, fine-grained fragmentation triggers distance-area and landscape effects on a local scale, which in turn, results in a range retraction of a population to non-fragmented or less fragmented parts of a region. At a certain point, non-fragmented areas become so widely spaced out that regional distance-area effects come into operation, giving rise to metapopulation dynamics. Although few bird metapopulations have yet been documented, metapopulation dynamics probably is a common characteristic of bird populations confined to 'hierarchical' fragmented forests.     

Significant genetic boundaries and spatial dynamics of giant pandas occupying fragmented habitat across southwest China

Understanding population history and genetic structure are key drivers of ecological research. Here, we studied two highly fragmented and isolated populations (Xiaoxiangling and Daxiangling) of giant pandas (Ailuropoda melanoleuca) at the extreme southwestern edge of their distribution. This area also contains the Dadu River, national road 108 and various human infrastructure and development, providing an ideal region in which we can identify the effects of different barriers on animal movements. We used partial mitochondrial control region (mtDNA) and nine microsatellite loci (nuclear DNA) data derived from 192 faecal and one blood sample collected from the wild. We found 136 genotypes corresponding to 53 unique multilocus genotypes and eight unique control region haplotypes (653 bp). Significant genetic boundaries correlated spatially with the Dadu River (K = 2). We estimate that a major divergence took place between these populations 26,000 years bp, at around the similar time the rock surface of valley bottom formed in Dadu River. The national road has resulted in further recent population differentiation (Pairwise F(S) on mtDNA and nuclear DNA) so that in effect, four smaller sub-populations now exist. Promisingly, we identified two possible first-generation migrants and their migration paths, and recommended the immediate construction of a number of corridors. Fortunately, the Chinese government has accepted our advice and is now planning corridor construction.     

Relationships between bird species and tree species assemblages in forested habitats of eastern North America

Aim We examined the relative influence of geographical location, habitat structure (physiognomy), and dominant plant species composition (floristics) on avian habitat relationships over a large spatial extent. Although it has been predicted that avian distributions are more likely to covary with physiognomy than with floristics at coarse scales, we sought to determine, more specifically, whether there remained a significant association between gradients in assemblages of bird species and dominant plant species within a general biome type, after statistically controlling for structural variation and geographical location of sampling sites. Location Our sample consisted of a subset of North American Breeding Bird Census survey sites that covered most of the range of eastern forests, from Florida to Nova Scotia, and west to Minnesota and North Dakota (up to c. 2500 km between sites). Methods We restricted our analyses to the single year (1981) that provided the largest sample of sites (47) for which vegetation data were available within ± 2 years of the avian surveys. We examined the relationship between avian community composition and tree species composition over this series of forested plots. Data were divided into four sets: (1) bird species abundances, (2) tree species abundances, (3) physiognomic or structural variables and (4) geographical location (latitude and longitude). We performed separate detrended correspondence analysis ordinations of birds and trees, before and after statistically partialling out covariation associated with structural variables and geographical location. To gauge the relationship between the two sets of species we correlated site scores resulting from separate ordinations. We also compared continental‐scale patterns of variation in bird and tree assemblages to understand possible mechanisms controlling species distribution at that scale. Results Both bird and tree communities yielded strong gradients, with first‐axis eigenvalues from 0.75 to 0.97. All gradients were relatively long (> 4.0), implying complete turnover in species composition. However, geographical location accounted for < 10% of the total variation associated with any ordination. Prior to partialling out covariation resulting from location and physiognomy, bird species ordinations were strongly correlated with tree species ordinations. The strength of association was reduced after partialling, but one bird and one tree axis remained significantly correlated. There was a significant species–area effect for birds, but not for trees. Main conclusions There was a significant relationship between bird species assemblages and tree species assemblages in the eastern forests of North America. Even after partialling out covariation associated with spatial location and forest physiognomy, there remained a significant correlation between major axes from bird and tree ordinations, consistent with the hypothesis that floristic variation is likely to be important in organizing assemblages of birds within a general biome type, albeit over a much larger spatial extent than originally predicted. Forest tree species ordinations differed from bird species ordinations in several ways: trees had a higher rate of turnover along underlying environmental gradients; trees appeared more patchily distributed than birds at this scale; and tree species were more spaced out along the underlying ecological gradients, with less overlap. By understanding the relationship between bird assemblages and forest floristics, we might better understand how avian communities are likely to change if tree species distributions are altered as a result of climatic changes.