Freshwater biodiversity and conservation in mediterranean climate streams of Chile

In Chile, mediterranean climate conditions only occur in the Central Zone (ChMZ). Despite its small area, this mediterranean climate region (med-region) has been recognised as a hotspot for biodiversity. However, in contrast to the rivers of other med-regions, the rivers in the ChMZ have been studied infrequently, and knowledge of their freshwater biodiversity is scarce and fragmented. We gathered information on the freshwater biodiversity of ChMZ, and present a review of the current knowledge of the principal floral and faunal groups. Existing knowledge indicates that the ChMZ has high levels of endemism, with many primitive species being of Gondwanan origin. Although detailed information is available on most floral groups, most faunal groups remain poorly known. In addition, numerous rivers in the ChMZ remain completely unexplored. Taxonomic specialists are scarce, and the information available on freshwater biodiversity has resulted from studies with objectives that did not directly address biodiversity issues. Research funding in this med-region has a strong applied character and is not focused on the knowledge of natural systems and their biodiversity. Species conservation policies are urgently required in this highly diverse med-region, which is also the most severely impacted and most populated region of the country.     

Climate change and freshwater biodiversity: detected patterns, future trends and adaptations in northern regions

Current rates of climate change are unprecedented, and biological responses to these changes have also been rapid at the levels of ecosystems, communities, and species. Most research on climate change effects on biodiversity has concentrated on the terrestrial realm, and considerable changes in terrestrial biodiversity and species’ distributions have already been detected in response to climate change. The studies that have considered organisms in the freshwater realm have also shown that freshwater biodiversity is highly vulnerable to climate change, with extinction rates and extirpations of freshwater species matching or exceeding those suggested for better‐known terrestrial taxa. There is some evidence that freshwater species have exhibited range shifts in response to climate change in the last millennia, centuries, and decades. However, the effects are typically species‐specific, with cold‐water organisms being generally negatively affected and warm‐water organisms positively affected. However, detected range shifts are based on findings from a relatively low number of taxonomic groups, samples from few freshwater ecosystems, and few regions. The lack of a wider knowledge hinders predictions of the responses of much of freshwater biodiversity to climate change and other major anthropogenic stressors. Due to the lack of detailed distributional information for most freshwater taxonomic groups and the absence of distribution‐climate models, future studies should aim at furthering our knowledge about these aspects of the ecology of freshwater organisms. Such information is not only important with regard to the basic ecological issue of predicting the responses of freshwater species to climate variables, but also when assessing the applied issue of the capacity of protected areas to accommodate future changes in the distributions of freshwater species. This is a huge challenge, because most current protected areas have not been delineated based on the requirements of freshwater organisms. Thus, the requirements of freshwater organisms should be taken into account in the future delineation of protected areas and in the estimation of the degree to which protected areas accommodate freshwater biodiversity in the changing climate and associated environmental changes.     

Threats and biodiversity in the mediterranean biome

Aim Global conservation assessments recognize the mediterranean biome as a priority for the conservation of the world's biodiversity. To better direct future conservation efforts in the biome, an improved understanding of the location, magnitude and trend of key threats and their relationship with species of conservation importance is needed. Location Mediterranean‐climate regions in California‐Baja California, Chile, South Africa, Australia and the Mediterranean Basin. Methods We undertook a systematic, pan‐regional assessment of threats in the mediterranean biome including human population density, urban area and agriculture. To realize the full implications of these threats on mediterranean biodiversity, we examined their relationship with species of conservation concern: threatened mammals at the global scale and threatened plants at the subecoregional scale in California, USA. Results Across the biome, population density and urban area increased by 13% and agriculture by 1% between 1990 and 2000. Both population density and urban area were greatest in California‐Baja California and least in Australia while, in contrast, agriculture was greatest in Australia and least in California‐Baja California. In all regions lowlands were most affected by the threats analysed, with the exception of population density in the Chilean matorral. Threatened species richness had a significant positive correlation with population density at global and subecoregional scales, while threatened species were found to increase with the amount of urban area and decrease as the amount of natural area and unfragmented core area increased. Main conclusions Threats to mediterranean biodiversity have increased from 1990 to 2000, although patterns vary both across and within the five regions. The need for future conservation efforts is further underlined by the positive correlation between species of conservation concern and the increase in population density over the last decade. Challenges to reducing threats extend beyond those analysed to include human–environmental interactions and their synergistic effects, such as urbanization and invasive species and wildfires.     

Taxonomic and biological trait differences of stream macroinvertebrate communities between mediterranean and temperate regions: implications for future climatic scenarios

Streams in mediterranean regions have highly seasonal discharge patterns, with predictable torrential floods and severe droughts. In contrast, discharge is less variable in temperate regions and intermittent flow conditions are uncommon. Hydroclimatic models predict that climate change would increase frequency and severity of floods and droughts across Europe, thus increasing the proportion of streams with mediterranean characteristics in actually temperate areas. Correspondingly, understanding actual ecological differences between mediterranean and temperate streams may help to anticipate large‐scale ecological impacts of climate change. Given that large‐scale factors determine local community composition, we hypothesized that climatic differences between mediterranean and temperate regions should affect the taxonomic and biological trait composition in streams. We assembled the abundance of stream macroinvertebrate genera of 265 sites each from the Mediterranean Basin and from temperate Europe and linked these abundances to published information on 61 categories of 11 biological traits reflecting the potential of resilience from and resistance to disturbances. Although regional taxonomic richness was higher in the mediterranean than in the temperate region, local taxonomic richness and diversity did not significantly differ between regions. Local trait richness and diversity were significantly higher in the mediterranean region. Both local taxonomic and trait‐community composition differed between regions, but the former varied much more than the latter, highlighting that climate change could produce large changes in the taxonomic but rather weak changes in the trait composition. The mediterranean region was characterized by macroinvertebrates with higher dispersion and colonization capabilities, suggesting that species loss in the temperate region, by extinction or northward emigration of taxa, would be compensated for by immigration of southern mediterranean taxa. Thus, climate change would likely have stronger implications for the local conservation of taxa than for the trait composition of stream macroinvertebrate communities.     

Climate change and alpine stream biology: progress,challenges, and opportunities for the future

In alpine regions worldwide, climate change is dramatically altering ecosystems and affecting biodiversity in many ways. For streams, receding alpine glaciers and snowfields, paired with altered precipitation regimes, are driving shifts in hydrology, species distributions, basal resources, and threatening the very existence of some habitats and biota. Alpine streams harbour substantial species and genetic diversity due to significant habitat insularity and environmental heterogeneity. Climate change is expected to affect alpine stream biodiversity across many levels of biological resolution from micro‐ to macroscopic organisms and genes to communities. Herein, we describe the current state of alpine stream biology from an organism‐focused perspective. We begin by reviewing seven standard and emerging approaches that combine to form the current state of the discipline. We follow with a call for increased synthesis across existing approaches to improve understanding of how these imperiled ecosystems are responding to rapid environmental change. We then take a forward‐looking viewpoint on how alpine stream biologists can make better use of existing data sets through temporal comparisons, integrate remote sensing and geographic information system (GIS) technologies, and apply genomic tools to refine knowledge of underlying evolutionary processes. We conclude with comments about the future of biodiversity conservation in alpine streams to confront the daunting challenge of mitigating the effects of rapid environmental change in these sentinel ecosystems.     

Vulnerability of stream biota to climate change in mediterranean climate regions: a synthesis of ecological responses and conservation challenges

Freshwater species worldwide are experiencing dramatic declines partly attributable to ongoing climate change. It is expected that the future effects of climate change could be particularly severe in mediterranean climate (med-) regions, which host many endemic species already under great stress from the high level of human development. In this article, we review the climate and climate-induced changes in streams of med-regions and the responses of stream biota, focusing on both observed and anticipated ecological responses. We also discuss current knowledge gaps and conservation challenges. Expected climate alterations have already been observed in the last decades, and include: increased annual average air temperatures; decreased annual average precipitation; hydrologic alterations; and an increase in frequency, intensity and duration of extreme events, such as floods, droughts and fires. Recent observations, which are concordant with forecasts built, show stream biota of med-regions when facing climate changes tend to be displaced towards higher elevations and upper latitudes, communities tend to change their composition and homogenize, while some life-history traits seem to provide biota with resilience and resistance to adapt to the new conditions (as being short-lived, small, and resistant to low streamflow and desiccation). Nevertheless, such responses may be insufficient to cope with current and future environmental changes. Accurate forecasts of biotic changes and possible adaptations are difficult to obtain in med-regions mainly because of the difficulty of distinguishing disturbances due to natural variability from the effects of climate change, particularly regarding hydrology. Long-term studies are needed to disentangle such variability and improve knowledge regarding the ecological responses and the detection of early warning signals to climate change. Investments should focus on taxa beyond fish and macroinvertebrates, and in covering the less studied regions of Chile and South Africa. Scientists, policy makers and water managers must be involved in the climate change dialogue because the freshwater conservation concerns are huge.     

Freshwater biodiversity in the rivers of the Mediterranean Basin

We review the diversity of freshwater organisms in the Mediterranean Basin (hereafter Med), particularly from streams and rivers. We present available information on the richness, endemicity, and distribution of each freshwater organism group within the Med, and make a comparison with Palearctic diversity. Approximately 35% of known Palearctic freshwater species and more than 6% of the World’s freshwater species are present in the Med. A high degree of endemicity is found in the Med freshwater biota. These data, together with the degree to which many freshwater species are threatened, support the inclusion of the Med among World biodiversity hotspots. Nevertheless, knowledge of Med biodiversity is still incomplete, particularly for some taxa. Regarding to the spatial distribution of species within the Med, the richest area is the North, although patterns differ among groups. A comparison of the ecological and biological traits of endemic and non-endemic species of three riverine groups (Ephemeroptera, Plecoptera, and Trichoptera) revealed that endemic species have several strategies and mechanisms to face typical mediterranean-climate conditions, such as drought, when compared to non-endemic species. We briefly analyse the conservation status of the region’s biodiversity. Finally, we present some future challenges regarding the knowledge and protection of Med freshwater biodiversity.     

Conservation challenges in a threatened hotspot: agriculture and plant biodiversity losses in Baja California,Mexico

Modern agricultural practices pose serious threats to biodiversity worldwide. Species losses from habitat conversion are well documented, but indirect impacts such as reduced water availability to adjacent ecosystems are less known. San Quintín is an important agricultural valley in the mediterranean climate region of Baja California, Mexico. The region is also a hotspot of plant species richness and endemism. Plant species in the region are here analyzed by comparison of the contemporary flora to historical botanical collections to identify extirpations. Historical collections indicate that habitat loss to agriculture has been a direct cause of species losses. As importantly, the unsustainable extraction of groundwater has apparently led to salt water intrusion, resulting in the loss of 22 native plant taxa, including 13 rare plants. Seventy-eight percent of all the vernal pool taxa have been lost from the flora (including 85 % of the rare taxa) and 11 % of plants of riparian and pond habitat (including 25 % of the rare taxa) are no longer found in the region. Unsustainable agricultural practices continue to threaten fragile coastal ecosystems and are a serious challenge to current and future conservation efforts. Ironically, these same practices frequently result in abandonment of cultivated areas. Owing to indirect impacts, conservation of biodiversity and large-scale agricultural operations are even less compatible on a regional scale than indicated by direct impacts. It is vital that sustainable agricultural practices be adopted locally and globally to avoid further losses of biodiversity.     

Multiple drivers of decline in the global status of freshwater crayfish (Decapoda: Astacidea)

Rates of biodiversity loss are higher in freshwater ecosystems than in most terrestrial or marine ecosystems, making freshwater conservation a priority. However, prioritization methods are impeded by insufficient knowledge on the distribution and conservation status of freshwater taxa, particularly invertebrates. We evaluated the extinction risk of the world''s 590 freshwater crayfish species using the IUCN Categories and Criteria and found 32% of all species are threatened with extinction. The level of extinction risk differed between families, with proportionally more threatened species in the Parastacidae and Astacidae than in the Cambaridae. Four described species were Extinct and 21% were assessed as Data Deficient. There was geographical variation in the dominant threats affecting the main centres of crayfish diversity. The majority of threatened US and Mexican species face threats associated with urban development, pollution, damming and water management. Conversely, the majority of Australian threatened species are affected by climate change, harvesting, agriculture and invasive species. Only a small proportion of crayfish are found within the boundaries of protected areas, suggesting that alternative means of long-term protection will be required. Our study highlights many of the significant challenges yet to come for freshwater biodiversity unless conservation planning shifts from a reactive to proactive approach.     

Aquatic biodiversity in the Mediterranean climate rivers of southwestern Australia

Southwestern Australia is recognised as a global biodiversity hotspot, characterised by high diversity and endemism of vascular terrestrial plants. However, the significance of its freshwater biodiversity is not well understood. This review provides an updated account of species richness in rivers in the Mediterranean region (med-region) of southwestern Australia. Taxonomic knowledge of many aquatic invertebrate groups in this region has improved significantly in the last two decades as a result of ecological surveys and government funding for taxonomic research. Of the 662 species of plants and animals surveyed, 43% were found to be endemic to the region, yet when taxonomic groups were considered separately, levels of endemism were varied. To date, few aquatic species from the med-region are listed as threatened; however, many more species would be expected to be included if assessed against appropriate criteria. Conservation efforts are focussed on climate change mitigation and managing the impacts of broad scale land clearing for agriculture. Reserve design and location of important nature reserves on the extreme south coast, limits the ability for species’ movement to cooler, wetter regions. This will necessitate supporting restoration which leads to increased resilience in freshwater ecosystems to withstand the combined effects of climate change and land use.     

The contribution of scientific information to the conservation and management of freshwater biodiversity in tropical Asia

Tropical Asia (i.e. the Oriental biogeographic region) is the most densely populated and degraded region on Earth with the highest deforestation rates in the tropics. Flow regulation is a significant threat to riverine biodiversity in the region, and its impacts are combined with overharvesting, pollution and other sources of habitat degradation. In addition to these immediate threats, the potential impacts of exotic species and climate change are difficult to predict. Uncertainty about impact effects arises also from the fact that knowledge of the rich freshwater biodiversity of tropical Asia is incomplete, and up-to-date national or regional inventories are lacking. In part, this reflects taxonomic constraints, and a limited representation of Asian science in the international limnological and conservation literature. A survey of recent (1992–2001) international journals dealing with freshwater ecology and limnology in general, on one hand, and conservation biology on the other, reveal that the representation of scientists based in tropical Asia was extremely low. Scientists from tropical Asia authored fewer than 2% of more than 4500 papers dealing with freshwater biology; 57% of them were published in Hydrobiologia. Less than 0.1% of freshwater biology papers dealt with the conservation of biodiversity in tropical Asian fresh waters. The representation of Asian freshwater science in the conservation biology literature was also poor; 0.6% of 1880 papers surveyed. Such limited dissemination of information reflects a variety of constraints (e.g. manpower, funding, language, and entrenched attitudes), arising from sources both within and outside the region. Even the data that are published are not effectively deployed toward conservation ends. Awareness of some of the more egregious examples of overharvesting (e.g. of river turtles) in the region has increased, but strategies for the protection of riverine biodiversity remain underdeveloped. Where legislation to protect water resources has been put in place, it has been directed towards enhancing human use of water – not biodiversity conservation – and enforcement is weak. Exceptionally, the Chinese government has produced national `Red Data Books' for endangered freshwater vertebrates, and legislation aimed at protecting species at risk, particularly from overharvesting, are in place. Huge obstacles remain, especially in the management of rivers crossing international boundaries. The Mekong River Commission (MRC) provides an example of a model for an international drainage basin that has made significant progress in establishing appropriate structures and mechanisms for sustainable development in a challenging political landscape. Not all of the Mekong riparian states participate in the MRC, and this will be essential for sustainable management. However, even within national borders, local interests can override drainage-basin perspectives. In many places in Asia, preservation of near-pristine freshwater environments is not a realistic option. Sustaining human livelihoods is an over-riding concern, and recognition of this fact must be built in to biodiversity conservation efforts. This has special implications for the management of exotic species, as the example of fish introductions to the Sepik River in Papua New Guinea shows. Notwithstanding the various factors that constrain publication by scientists in tropical Asia, we must recognise that poor dissemination research results will have consequences for the long-term preservation of the habitats and biodiversity that we study. A change in research strategy that establishes priorities, recognises the inevitability of trade-offs, and includes greater emphasis on engagement and partnerships – as in the MRC – is mandated.     

Modelling distribution in European stream macroinvertebrates under future climates

Climate change is predicted to have profound effects on freshwater organisms due to rising temperatures and altered precipitation regimes. Using an ensemble of bioclimatic envelope models (BEMs), we modelled the climatic suitability of 191 stream macroinvertebrate species from 12 orders across Europe under two climate change scenarios for 2080 on a spatial resolution of 5 arc minutes. Analyses included assessments of relative changes in species’ climatically suitable areas as well as their potential shifts in latitude and longitude with respect to species’ thermal preferences. Climate‐change effects were also analysed regarding species’ ecological and biological groupings, namely (1) endemicity and (2) rarity within European ecoregions, (3) life cycle, (4) stream zonation preference and (5) current preference. The BEMs projected that suitable climate conditions would persist in Europe in the year 2080 for nearly 99% of the modelled species regardless of the climate scenario. Nevertheless, a decrease in the amount of climatically suitable areas was projected for 57–59% of the species. Depending on the scenario, losses could be of 38–44% on average. The suitable areas for species were projected to shift, on average, 4.7–6.6° north and 3.9–5.4° east. Cold‐adapted species were projected to lose climatically suitable areas, while gains were expected for warm‐adapted species. When projections were analysed for different species groupings, only endemics stood out as a particular group. That is, endemics were projected to lose significantly larger amounts of suitable climatic areas than nonendemic species. Despite the uncertainties involved in modelling exercises such as this, the extent of projected distributional changes reveals further the vulnerability of freshwater organisms to climate change and implies a need to understand the consequences for ecological function and biodiversity conservation.     

Latitudinal, habitat and substrate distribution patterns of freshwater ascomycetes in the Florida Peninsula

Freshwater ascomycetes are important decomposers of dead woody and herbaceous debris in aquatic habitats. Despite evidence of their ecological importance, latitudinal, habitat and substrate distributional patterns of freshwater ascomycetes are poorly understood. In this study, we examined the latitudinal and habitat distributional patterns, and substrate recurrences of freshwater ascomycetes by collecting dead submerged woody and herbaceous debris in lentic and lotic habitats at five selected sites along a north-central-south, temperate–subtropical latitudinal ecotone in Florida. One hundred and thirty-two fungal taxa were collected during the study. Seventy-four were meiosporic and 56 were mitosporic ascomycetes, while two species were basidiomycetes. Canonical analyses of principal coordinates (CAP) and Sørenson’s similarity index of species based on presence/absence data revealed a high turnover in species composition between the northern and southern sites, indicating a change in species composition along the temperate–subtropical latitudinal ecotone of the Florida Peninsula. Results from the ordination analysis indicated that freshwater ascomycete community composition is not significantly different between lentic and lotic habitats in Florida. The geographically broadly distributed species and species commonly found in Florida occurred in both habitats, whereas a number of new or rare species occurred in either lentic or lotic habitats, but not both. The same freshwater ascomycete species did not necessarily occur on both woody and herbaceous debris; of the 132 taxa collected, 100 were reported only on woody debris; 14 species occurred exclusively on herbaceous debris; and 18 species were found on both woody and herbaceous debris in lentic or lotic habitats. Implications of data from this study to the conservation and knowledge of biodiversity for freshwater ascomycetes is discussed.     

Water management in mediterranean river basins: a comparison of management frameworks, physical impacts, and ecological responses

Rivers in mediterranean climates have been extensively modified by water management infrastructure and practices, yet patterns of development and consequent effects on freshwater ecosystems have not been compared across multiple regions. To evaluate the influence of water management on mediterranean-climate rivers, we compare the historic progression of management policies, institutions, and ecosystem impacts in the Sacramento River (California, USA), Ebro River (Spain), and Biobío River (Chile) basins. There are broad similarities in patterns of ecosystem alterations related to the extensive development of dams and water management infrastructure in the three study basins. Flow regimes have been altered by the reduction of winter peak flows and increased summer baseflows. There are also common patterns of disturbance from sediment transport alteration, water quality degradation, and declines in freshwater biodiversity. Current approaches are inadequate for addressing the formidable water management challenges in California, Spain, and Chile, yet the dramatic evolution of water policies and institutions over the past 150 years suggests that further adaptation is possible. Advances toward integrated and sustainable water management models are likely to occur through incremental change, driven by growing awareness of climate change effects and public demands for water-use efficiency and improved environmental quality.     

Context‐dependent resistance of freshwater invertebrate communities to drying

More freshwater ecosystems are drying in response to global change thereby posing serious threat to freshwater biota and functions. The production of desiccation‐resistant forms is an important adaptation that helps maintain biodiversity in temporary freshwaters by buffering communities from drying, but its potential to mitigate the negative effects of drying in freshwater ecosystems could vary greatly across regions and ecosystem types. We explored this context dependency by quantifying the potential contribution of desiccation‐resistance forms to invertebrate community recovery across levels of regional drying prevalence (defined as the occurrence of drying events in freshwaters in a given region) and ecosystem types (lentic, lotic) in temporary neotropical freshwaters. We first predicted that regional drying prevalence influences the selection of species with desiccation‐resistant forms from the regional species pools and thus increases the ability of communities to recover from drying. Second, we predicted lentic freshwaters harbor higher proportions of species with desiccation‐resistant forms compared to lotic, in response to contrasted hydrologic connectivity. To test these predictions, we used natural experiments to quantify the contribution of desiccation‐resistant forms to benthic invertebrate community recovery in nine intermittent streams and six geographically isolated temporary wetlands from three Bolivian regions differing in drying prevalence. The contribution of desiccation‐resistant forms to community recovery was highest where regional drying prevalence was high, suggesting the species pool was adapted to regional disturbance regimes. The contribution of desiccation‐resistant forms to community recovery was lower in streams than in wetlands, emphasizing the importance of hydrologic connectivity and associated recolonization processes from in‐stream refuges to recovery in lotic systems. In all regions, the majority of functional traits were present in desiccation‐resistant taxa indicating this adaptation may help maintain ecosystem functions by buffering communities from the loss of functional traits. Accounting for regional context and hydrologic connectivity in community recovery processes following drying can help refine predictions of freshwater biodiversity response to global change.     

BIODIVERSITY RESEARCH: Geographical linkages between threats and imperilment in freshwater fish in the Mediterranean Basin

Aim The level of imperilment of mediterranean freshwater fish is among the highest recorded for any group of organisms evaluated to date. Here, we describe the geographical patterns in the incidence of threats affecting mediterranean freshwater fish and test whether the effects of specific threats are spatially related to the degree of imperilment of fish faunas. Location The Mediterranean Basin Biome. Methods From the IUCN Red List, we recorded the six main threats to 232 endemic freshwater fish species. We used data on fish distributions from IUCN to characterize the spatial patterns in the incidence of threats (as percentage of species affected) through multivariate statistics. We studied the relationships between threat incidence and two estimators of imperilment (proportion of species threatened and an index of extinction risk) at two spatial scales (10 × 10 km and basins) using partial least squares regressions (PLSR) that incorporated the effects of species richness and mean range size. Results The main axis of variation in the incidence of threats to freshwater fish split areas mainly affected by invasive species from those areas where species are threatened by pollution and agriculture. Wherever invasive species and water extraction were predominant threats, fish assemblages consistently tended to be more imperilled. Main conclusions As far as we know, this is the first large‐scale analysis on the spatial relationships between the incidence of threats and level of imperilment of any taxonomic group. Our results highlight the primary role of invasive species and water extraction as drivers of native fish declines in the Mediterranean Basin. Large‐scale patterns described here should be generated by local‐scale impacts of both threats on fish biodiversity, widely reported in Mediterranean areas. Because all the species under concern are endemic, control of invasive species and reducing overexploitation of freshwater resources should be conservation priorities for mediterranean freshwater systems.     

Synthesizing the role of epigenetics in the response and adaptation of species to climate change in freshwater ecosystems

Freshwater ecosystems are amongst the most threatened ecosystems on Earth. Currently, climate change is one of the most important drivers of freshwater transformation and its effects include changes in the composition, biodiversity and functioning of freshwater ecosystems. Understanding the capacity of freshwater species to tolerate the environmental fluctuations induced by climate change is critical to the development of effective conservation strategies. In the last few years, epigenetic mechanisms were increasingly put forward in this context because of their pivotal role in gene–environment interactions. In addition, the evolutionary role of epigenetically inherited phenotypes is a relatively recent but promising field. Here, we examine and synthesize the impacts of climate change on freshwater ecosystems, exploring the potential role of epigenetic mechanisms in both short‐ and long‐term adaptation of species. Following this wrapping‐up of current evidence, we particularly focused on bringing together the most promising future research avenues towards a better understanding of the effects of climate change on freshwater biodiversity, specifically highlighting potential molecular targets and the most suitable freshwater species for future epigenetic studies in this context.     

Do stream fish track climate change? Assessing distribution shifts in recent decades

Understanding the ability of species to shift their distribution ranges in response to climate change is crucial for conservation biologists and resources managers. Although freshwater ecosystems include some of the most imperilled fauna worldwide, such range shifts have been poorly documented in streams and rivers and have never been compared to the current velocity of climate change. Based on national monitoring data, we examined the distributional changes of 32 stream fish species in France and quantified potential time lags in species responses, providing a unique opportunity to analyze range shifts over recent decades of warming in freshwater environments. A multi‐facetted approach, based on several range measures along spatial gradients, allowed us to quantify range shifts of numerous species across the whole hydrographic network between an initial period (1980–1992) and a contemporary one (2003–2009), and to contrast them to the rates of isotherm shift in elevation and stream distance. Our results highlight systematic species shifts towards higher elevation and upstream, with mean shifts in range centre of 13.7 m decade^?1 and 0.6 km decade^?1, respectively. Fish species displayed dispersal‐driven expansions along the altitudinal gradient at their upper range limit (61.5 m decade^?1), while substantial range contractions at the lower limit (6.3 km decade^?1) were documented for most species along the upstream–downstream gradient. Despite being consistent with the geographic variation in climate change velocities, these patterns reveal that the majority of stream fish have not shifted at a pace sufficient to track changing climate, in particular at their range centre where range shifts lag far behind expectation. Our study provides evidence that stream fish are currently responding to recent climate warming at a greater rate than many terrestrial organisms, although not as much as needed to cope with future climate modifications.     

Spatio-temporal changes in habitat potential of endangered freshwater fish in Japan

In recent years, biodiversity conservation and ecosystem restoration have been key issues of watershed management in many countries. To maintain or restore the environmental quality of watersheds, we need to assess the impact of anthropogenic changes on stream ecosystems with accuracy. In addition, watershed conservation planners have to make strategic plans and determine priorities of each conservation activity.

A new monitoring methodology to evaluate the change of habitat condition for freshwater fish based on a predictive habitat model using logistic regression was developed and applied to the whole of Japan. The main contributions of our approach were 1) the construction of a Geographical Information System (GIS) database that integrates many types of data, including freshwater fish species, water quality, habitat fragmentation by damming, geology, and climate; 2) spatial analysis for quantitative assessment and predictive habitat modeling using logistic regression to combine fish survey data and environmental habitat factors to determine critical and major habitat variables for each target fish; and 3) digital mapping and changes detection of fish habitat potential for targeted endangered fish species to show habitat distribution and spatio-temporal changes of habitat potential over a 25-year period (from 1977 to 2002). We found that predicted suitable habitat and actual fish habitat showed high overlap, and that habitat conditions and distribution patterns of target freshwater fish had been affected by major habitat variables to target species respectively.     

Late-successional biological soil crusts in a biodiversity hotspot: an example of congruency in species richness

Understanding the biodiversity of functionally important communities in Earth’s ecosystems is vital in the apportionment of limited ecosystem management funds and efforts. In southern California shrublands, which lie in a global biodiversity hotspot, biological soil crusts (BSCs) confer critical ecosystem services; however, their biodiversity remains unknown. In this study, six sites (n = 4 each, 25 m²) were established along a mediterranean shrubland environmental gradient in southern California. Here, the biodiversity of all BSC-forming lichens and bryophytes was evaluated, related to environmental traits along the gradient, and compared to species richness among North American ecosystems supporting BSCs (data from previous studies). In total, 59 BSC-forming lichens and bryophytes were observed, including the very rare Sarcogyne crustacea, a rare moss, and five endemic lichen species. Over half (61%) of the species observed were found at a single site. Along the gradient, species evenness of late-successional BSC was related to dew point and elevation, and both evenness and richness were related to distance to coast. Using an ordination analysis, five distinct late-successional BSC communities were identified: Riversidian, Spike moss, Casperian, Alisian, and Lagunian. Twenty-five lichens and 19 bryophytes are newly reported for North American BSC-forming organisms, now comprising ~1/2 of the North American total. BSCs in North American hot and cold deserts were approximately 4.0 and 2.4 times less species rich than BSCs found in southern California shrublands, respectively. Given the anthropogenic impacts on quality and distribution of California mediterranean shrublands, our results show that these sites represent important refugia of BSC species in this globally important region.