Sexual selection promotes hybridization between Pecos pupfish, Cyprinodon pecosensis and sheepshead minnow, C. variegatus

Rapid and extensive genetic introgression has occurred between Pecos pupfish (Cyprinodon pecosensis) and sheepshead minnow (Cyprinodon variegatus) in the wild. We studied both female mate choice and male-male competition for mates among C. pecosensis, C. variegatus, and their F1 hybrids to determine what role these behaviours played in the formation of the hybrid swarm. Female C. pecosensis preferred male C. variegatus to conspecific males, C. variegatus females displayed no significant preference when given a choice between purebred males, and neither C. pecosensis nor C. variegatus females discriminated against F1 hybrid males. We found no evidence for female olfactory recognition of mates. Male F1 hybrids and C. variegatus were more aggressive than C. pecosensis males, achieving greater reproductive success under two different experimentally-induced mating systems. Hybrids were superior to C. variegatus when only two males competed (dominance interactions), but the two types were competitively equivalent in a territorial mating system. Our results indicate that active inter- and intra-sexual selection contributed to the accelerated hybridization between these two species. By including the possibility that some aspects of a hybridization and introgression event may be under positive selection, researchers may better understand the dynamics that lead to hybrid zone stability or the spread of introgressed genetic material.     

DEVELOPMENT OF THE HYBRID SWARM BETWEEN PECOS PUPFISH (CYPRINODONTIDAE: CYPRINODON PECOSENSIS) AND SHEEPSHEAD MINNOW (CYPRINODON VARIEGATUS): A PERSPECTIVE FROM ALLOZYMES AND mtDNA

A comparison of allozyme and mtDNA frequencies was used for insight into a situation in the Pecos River, Texas where contact between the endemic pupfish (Cyprinodon pecosensis) and an introduced congener (C. variegatus) has resulted in rapid, geographically extensive genetic introgression. Temporal changes in mean frequencies of diagnostic allozyme markers indicate that the clinal pattern of introduced genetic material (Echelle and Connor 1989) is slowly decreasing in amplitude. Significant rank concordance in diagnostic allele frequencies among sites and across sampling years indicates directional influences upon temporal allele frequency change. These observations are consistent with the theory of gene flow in neutral clines. Levels of introgression indicated by each of four allozyme loci and mtDNA were roughly equivalent. The early history of the hybrid swarm is explained by genetic swamping, possibly mediated by selection for C. variegatus or C. variegatus × C. pecosensis, at a time when the normally abundant endemic species had been catastrophically depleted. High frequencies of an introduced GPI-A allele in all samples of intergrades suggests that the introduced genome originated with a single founding event.     

RAPID,GEOGRAPHICALLY EXTENSIVE GENETIC INTROGRESSION AFTER SECONDARY CONTACT BETWEEN TWO PUPFISH SPECIES (CYPRINODON,CYPRINODONTIDAE)

Apparently between 1980 and 1984, Cyprinodon variegatus was introduced into an area of the Pecos River in Texas, where it hybridized with an endemic species, C. pecosensis. Protein electrophoresis indicated that, by 1985, panmictic admixtures of these two pupfishes occupied approximately 430 river-kilometers of the Pecos River, roughly one-half of the historic range of the endemic species. The average frequency of introduced alleles at four diagnostic loci ranged from 0.18 to 0.84 at the 15 sites sampled from the Pecos River in Texas. Clinal patterns in allele frequencies suggest that C. variegatus was introduced into a mid-reach of the river and that this was followed by both upstream and downstream dispersal of the introduced alleles. All pairwise combinations of loci showed significant linkage disequilibrium. The level of disequilibrium indicates chromosomal linkage for one gene-pair, Gpi-A and Est-1. The change in pupfish allele frequencies in the Pecos River represents an extreme example of rapid natural selection in a seminatural situation.     

Heterochrony, maternal effects, and phenotypic variation among sympatric pupfishes

Variation in ontogeny can produce phenotypic variation both within and among species. I investigated whether changes in timing and rate of growth were a source of phenotypic variation in a putative incipient species group of pupfish (Cyprinodon spp.). On San Salvador Island, Bahamas, sympatric forms of pupfish differ in morphology but show only partial reproductive isolation in the laboratory. Offspring from two forms and two geographical areas and their hybrids were bred in the laboratory, and ontogenetic trajectories of their feeding morphology were followed until maturity. In the Bahamian pupfish the two forms grow along similar size but not shape trajectories. Two heterochronic parameters, onset and rate of growth, alter shape trajectories in the Bahamian pupfish. Similar forms from different geographical areas (Florida and the Bahamas) grow along parallel shape trajectories, differing only in one heterochronic parameter, the onset shape. Hybrids within and between the pupfish forms produced intermediate feeding morphologies that were influenced by their maternal phenotype, suggesting that maternal effects may be a source of phenotypic variation in shape that can persist to maturity. In Cyprinodon, small changes in multiple heterochronic parameters translate into large phenotypic differences in feeding morphology.     

Genic diversity in Red River pupfish Cyprinodon rubrofluviatilis (Atheriniformes: Cyprinodontidae) and its implications for the conservation genetics of the species

Starch gel electrophoresis of proteins was used to study geographic variation at 26 gene loci in the Red River pupfish ( Cyprinodon rubrofluviatílís ), a species restricted to west Texas and Oklahoma. Marked differences were detected between populations in the Red and Brazos river drainages, with fixed or nearly fixed differences occurring at five gene loci. In addition, mean heterozygosity was uniformly high for the Red River form ( = 0·076–0·101) while samples of the Brazos River form were genetically depauperate ( =0·00–0·017). Introduced populations in the South Canadian and Colorado river drainages appear to have been derived from the Red River drainage. The presence of alleles diagnostic of the Red and Brazos river forms supports the suggestion from previous work that they may represent cryptic species. Regardless of taxonomy, however, the presence of two genetically distinct forms must be taken into consideration by those concerned with maintenance of biotic diversity.     

Characterization of microsatellite markers in a threatened species,the White Sands pupfish (Cyprinodon tularosa)

We report the characterization of nine new microsatellite markers for a threatened species, the White Sands pupfish (Cyprinodon tularosa), using an enriched library method. These markers show moderate levels of variation (two to five alleles per locus) in the two native populations of this species and reveal substantial divergence between these two populations as indicated by a high percentage of private alleles. These markers will prove very useful in the conservation management of this rare species.     

Evaluation of the role of refugia in conservation efforts for the Devils Hole pupfish,Cyprinodon diabolis Wales

The Hoover Dam Refugium was built to help insure the survival of the Devils Hole pupfish during an especially critical period. It served that purpose well. The Amargosa Pupfish Station added an additional, nearly identical artificial habitat to use in conservation and management of the Devils Hole pupfish. Contemporary concerns of conservation biology suggest that: 1) Genetic diversity or homogeneity of refugium populations should, when possible, be established by biochemical and morphological techniques; 2) protection of the natural habitat has been effected, and population levels have returned essentially to normal, therefore, management intervention in the natural population is not now appropriate; 3) refugium populations represent a unique opportunity to develop information useful in conservation and management of small populations of endangered fishes, if legal restrictions to such investigations can be accommodated; and 4) refugia, dependent on human activities for construction and maintenance, are less reliable than natural habitats.     

Sexual selection is stabilizing selection in pupfish [Cyprinodon pecosensis)

One of the predictions of the 'good genes' model of sexual selection is that reproductively successful males with well-developed indicator traits should show smaller variances for non-indicator traits, that are not directly associated with mating success, when compared to non-breeding males and females. Thus sexual selection should reinforce stabilizing natural selection in reducing the variance in quantitative traits. This prediction is tested by analysing variation in eight morphological traits of breeding males, non-breeding males, and females of pupfish (Cyprinodon pecosensis). Breeding males tended to be less variable than non-breeding males for all principal component factors, and for all morphological traits except for depth, although these differences were statistically significant only for PC2, and PC5 and for pelvic fin length, number of pelvic fin rays and number of preopercular and preorbital pores. Similarly, breeding males tended to be less variable than females for all principal component factors and for all morphological traits except for number of preopercular pores. These differences were statistically significant for PC2, and for depth, pelvic fin length, number of preorbital pores and pectoral fin rays. The overall pattern of reduced variability in independent traits of breeding males revealed by principal component analysis is very consistent and highly significant (P<10⁵). These results support the prediction of the 'good genes' model and show that reproductively active males are subject to more severe stabilizing selection for several quantitative traits than non-breeding males and females. Thus sexual selection, through male-male competition, female choice, or an interaction of both selective processes, results in stabilizing selection on quantitative morphological traits.     

Environmental variation,hybridization, and phenotypic diversification in Cuatro Ciénegas pupfishes

Hybridization can generate novel phenotypes, and in combination with divergent selection along environmental gradients, can play a driving role in phenotypic diversification. This study examined the influence of introgressive hybridization and environmental variation on the phenotypic diversity of two pupfish species (Cyprinodon atrorus and Cyprinodon bifasciatus) endemic to the Cuatro Ciénegas basin, Mexico. These species occupy opposite environmental extremes and are comprised of multiple, intraspecifically isolated populations. However, interspecific hybridization occurs to various degrees within connecting, intermediate environments. Using geometric morphometric analysis, extensive variation of body shape was observed between and within species, and phenotypic variation was strongly correlated with environmental conditions. Furthermore, some introgressed populations exhibited unique phenotypes not found in either of the parents, and overall morphospace occupation was significantly higher in introgressed populations when compared to the parentals. Overall, we find environmental variation and transgressive segregation both appear to have been important in shaping phenotypic variation in this system.     

Assessment of Potential Impacts of Exotic Species on Populations of a Threatened Species, White Sands Pupfish, Cyprinodon tularosa

The potential impact of introduced species on rare taxa is of particular concern to conservation biologists. We evaluate the impacts of western mosquitofish (Gambusia affinis) and virile crayfish (Orconectes virilis) on experimental populations of a threatened species, the White Sands pupfish (Cyprinodon tularosa). Forty experimental pupfish populations were exposed to one of four treatments; (a) 1 crayfish, (b) 4 crayfish, (c) 5 adult mosquitofish and (d) control. Pupfish population size and biomass was monitored over the duration of one breeding season. A repeated measure multiple analysis of covariance revealed a significant effect of treatments on response variables (population size and biomass) (P<0.0001). Mosquitofish had a significant effect on population size and biomass (P=0.0330). The effect of one crayfish was not significant (P=0. 0683). However, 4 crayfish had a significant effect (P<0.0001) on population size. We use these data, along with information on environmental tolerances of crayfish and mosquitofish, to evaluate risks for specific pupfish populations. An erratum to this article is available at .     

Microsatellite DNA analysis of success in conserving genetic diversity after 33 years of refuge management for the desert pupfish complex

Refuge populations of Cyprinodon macularius and Cyprinodon eremus , the extant members of the endangered desert pupfish complex, have been maintained for up to 33 years in semi-natural refuges. We examined the success of the refuge program in maintaining diversity at four microsatellite DNA loci in 24 refuge populations of C. macularius and six of C. eremus that include, respectively, seven and four lineages representing original translocations from the wild. These lineages have been maintained with essentially no inoculations of genetic material from the wild and, except for one refuge, no intermixing of lineages. Comparison with wild-source populations showed marked declines in diversity within local refuges and within lineages, but relatively minor declines for the composite of all refuge populations for each species. In genetic makeup, the refuge populations generally clustered by lineage, indicating significant genetic drift early in lineage history. The results indicate that, with relatively minor adjustments in management, the refuge program can successfully preserve a large portion of the wild genetic diversity in the desert pupfish complex.     

Numerical analysis of infraspecific variation in European Silene alba and S. dioica(Caryophyllaceae)

Infraspecific variation among European populations of Silene alba and S. dioica was analysed by non-metric multidimensional scaling, which was applied to K-dissimilarity matrices based either on 16 seed characters or on 34 seed, flower and capsule characters. The material used for analysis consisted of 167 collections of wild seed, largely obtained from European botanic gardens, and 97 sets of mature greenhouse-grown progeny. S. alba was found to show topoclinal variation, primarily along an axis from the Iberian peninsula through central Europe to Romania. This pattern is not reflected in current taxonomic treatments. N. and N.W. European S. alba is morphologically heterogeneous and has probably been introduced from various southern sources. S. dioica shows less total variation between populations than S. alba , and consists of local ecogeographic races that intergrade at their margins. The two species are completely discriminated by seed, flower and capsule characters when used in combination, but S. alba populations from the eastern end of the cline closely approach S. dioica in seed morphology. This convergence is unlikely to be an effect of recent introgression.     

PHOSPHOGLUCONATE DEHYDROGENASE POLYMORPHISM AND SALINITY IN THE WHITE SANDS PUPFISH

The phosphogluconate dehydrogenase (Pgdh) locus is the only polymorphic allozyme locus observed among 37 loci examined in all four populations of a New Mexico state Endangered species, the White Sands pupfish (Cyprinodon tularosa). We report evidence suggesting that this polymorphism may be associated with salinity. Salinity levels vary widely within and between habitats occupied by White Sands pupfish. The frequency of the Pgdh¹⁰⁰ allozyme was correlated with salinity but not with temperature. Frequency of Pgdh¹⁰⁰ differed between low (3.76 parts per thousand (ppt)) and high (9.23 ppt) salinity sites at Malpais Spring despite no obvious barriers to fish movement. Frequencies of Pgdh¹⁰⁰ in two introduced populations differed from that of the presumptive founding stock and correlated with salinity in the current habitats.     

CLINAL VARIATION ASSOCIATED WITH EDAPHIC ECOTONES IN HYBRID POPULATIONS OF GAILLARDIA PULCHELLA

The variety pulchella of the outcrossing annual plant species Gaillardia pulchella consists of two edaphic races in central Texas which are divergent for one morphological and four electrophoretic characters. Reduced pollen stainability in F₁ hybrids suggests the races are also divergent in chromosome structure. The recent proliferation of this species on roadsides and in pastures has led to hybridization between these races. An analysis of character variation in three hybrid populations revealed significant clinal variation associated with edaphic ecotones, and the width of these clines was found to vary among characters in a consistent pattern. It is argued that this pattern is the result of different characters experiencing different effective selection regimes, with narrower clines reflecting greater differentials in effective selection. Several mechanisms are discussed by which selection may impede the transgression of alleles across the ecotones in these populations. The results of this study are compared to the results of parallel studies on the autogamous annual species Avena barbata in California, and it is suggested that the difference between these two species in the width of clines separating edaphic ecotypes may be accounted for by their different breeding systems.     

Analysis of the clinal variation pattern inSilene latifolia (Caryophyllaceae) pollen morphology

Reticulate and microechinate pollen forms withinSilene latifolia (S. alba, S. pratensis) were first described from N. America, where the species is an introduced weed. A previous study showed that the two forms also exist in Europe and intergrade along a zone roughly congruent with intergradation zones in seed morphology and flavone glycosylation genotypes. The present survey of pollen from herbarium specimens is more extensive and covers localities from nearly the whole of the species' native Eurasian and North African range. The first axis of a detrended correspondence analysis (DCA) of qualitative characterstate data for 11 pollen morphological characters shows a gradient between the two extreme exine types, reticulate and microechinate. When mapped, the co-ordinates of pollen samples on this axis indicate a broad zone of intergradation which coincides approximately with the somewhat sharper transition between low- and high-tubercle seeds in C. and N. Europe, but becomes diffuse in Italy and the Mediterranean region and diverges from the seed transition zone in SW. Asia and the Middle East. The biological significance of the pollen morphs is unknown; the variation pattern in pollen morphology, unlike that in seeds, is not consistently correlated with macroclimate.     

Influence of hydrogeographic history and hybridization on the distribution of genetic variation in the pupfishes Cyprinodon atrorus and C. bifasciatus

The evolutionary importance of hybridization in animals has been subject of much debate. In this study, we examined the influence of hydrogeographic history and hybridization on the present distribution of nuclear and mitochondrial DNA variation in two pupfish species, Cyprinodon atrorus and Cyprinodon bifasciatus. Results presented here indicate that there has been limited introgression of nuclear genes; however, mtDNA introgression has been substantial, with complete replacement of the C. bifasciatus mitochondrial genome by that of C. atrorus. Subsequent to this replacement, there has been diversification of mitochondrial haplotypes along major geographic regions in the basin. Evidence was also found that mitochondrial replacement follows a predictable, cyclical pattern in this system, with isolation and diversification followed by re-contact and replacement of C. bifasciatus mitochondrial haplotypes by those of C. atrorus. This pattern is best explained by a combination of a numeric bias towards C. atrorus and mating site selection rather than selection for C. atrorus mitochondrial genome. These results demonstrate the important role hybridization can play in evolution.     

Morphological, cytogenetic, and molecular evidence for introgressive hybridization in birch.

Extensive morphological variation of tetraploid birch (Betula pubescens) in Iceland is believed to be due to gene flow from diploid dwarf birch (B. nana) by means of introgressive hybridization. A combined morphological and cytogenetic approach was used to investigate this phenomenon in two geographically separated populations of natural birch woodland in Iceland. The results not only confirmed introgressive hybridization in birch, but also revealed bidirectional gene flow between the two species via triploid interspecific hybrids. The populations showed continuous morphological variation connecting the species, but karyotypically they consisted of only three types of plants: diploids, triploids, and tetraploids. No aneuploids were found. Some of the tetraploid plants had B. pubescens morphology as expected, but most of them had intermediate characters. Most of the diploid plants were B. nana, but some were intermediates and a few had B. pubescens morphology. The triploid plants were either intermediates or they resembled one of the two species. Similar introgressive variation was observed among the diploid and triploid progeny of open-pollinated B. nana in a garden. Birch samples including field plants and artificial hybrids were further examined using a molecular method based on genomic Southern hybridization. The experiments verified introgression at the DNA level.     

Morphological and RAPD analysis of hybridization between Quercus affinis and Q. laurina (fagaceae), two Mexican red oaks

Quercus affinis and Q. laurina are two closely related Mexican red oaks with partially overlapping distributions. Within the area of overlap, there are localities where morphological intergradation occurs. A previous hypothesis explained this pattern as a result of secondary contact between the two species, followed by hybridization and introgression. This possibility was analyzed here by examining foliar and genetic variation in 16 localities situated along a macrogeographic gradient, which included morphologically representative populations of both species and populations from within the area of overlap. Maximum-likelihood hybrid index scores calculated from nine semi-diagnostic RAPD markers indicated a shift in the genetic composition of populations from one species to the other along the macrogeographic gradient, with genetically intermediate populations situated in the area of overlap. Foliar variation followed a partially congruent pattern, but Q. laurina-like morphology predominated in some of the genetically intermediate populations. There were several instances of correlated frequency changeovers of single RAPD markers and morphological characters along the macrogeographic gradient and a few cases of markedly parallel patterns between markers. The results were interpreted as consistent with a hypothesis of secondary contact between the two oak species that has resulted in some differential introgression among markers.     

Rapid genetic and morphologic divergence between captive and wild populations of the endangered Leon Springs pupfish,Cyprinodon bovinus

The Leon Springs pupfish (Cyprinodon bovinus) is an endangered species currently restricted to a single desert spring and a separate captive habitat in southwestern North America. Following establishment of the captive population from wild stock in 1976, the wild population has undergone natural population size fluctuations, intentional culling to purge genetic contamination from an invasive congener (Cyprinodon variegatus) and augmentation/replacement of wild fish from the captive stock. A severe population decline following the most recent introduction of captive fish prompted us to examine whether the captive and wild populations have differentiated during the short time they have been isolated from one another. If so, the development of divergent genetic and/or morphologic traits between populations could contribute to a diminished ability of fish from one location to thrive in the other. Examination of genomewide single nucleotide polymorphisms and morphologic variation revealed no evidence of residual C. variegatus characteristics in contemporary C. bovinus samples. However, significant genetic and morphologic differentiation was detected between the wild and captive populations, some of which might reflect local adaptation. Our results indicate that genetic and physical characteristics can diverge rapidly between isolated subdivisions of managed populations, potentially compromising the value of captive stock for future supplementation efforts. In the case of C. bovinus, our findings underscore the need to periodically inoculate the captive population with wild genetic material to help mitigate genetic, and potentially morphologic, divergence between them and also highlight the utility of parallel morphologic and genomic evaluation to inform conservation management planning.