粪便DNA突变检测在快速筛选大肠癌中的应用

大肠癌是发病率和死亡率都很高的常见疾病, 对高危人群进行大规模的普查筛选, 可以降低大肠癌的发生率和死亡率。粪便DNA突变检测是新近发展的可用作大肠癌普查的技术, 与常规结肠镜检测和大便隐血实验相比, 具有特异性高、灵敏度高和易于被患者接受等优点。文章阐述了粪便DNA突变检测的相关基因、肿瘤特异性DNA提取方法和检测方法等, 并对其在快速筛选大肠癌中的应用进行了展望。大肠癌是发病率和死亡率都很高的常见疾病, 对高危人群进行大规模的普查筛选, 可以降低大肠癌的发生率和死亡率。粪便DNA突变检测是新近发展的可用作大肠癌普查的技术, 与常规结肠镜检测和大便隐血实验相比, 具有特异性高、灵敏度高和易于被患者接受等优点。文章阐述了粪便DNA突变检测的相关基因、肿瘤特异性DNA提取方法和检测方法等, 并对其在快速筛选大肠癌中的应用进行了展望。     

基于免疫磁珠富集粪便脱落细胞的大肠癌筛选法

大肠癌是目前发病率、致死率均较高的恶性肿瘤,严重危害人民健康生活.现有的临床检测技术均存在一定的局限性,因而限制了其临床应用的范围.与常规临床大肠癌检测相比,粪便脱落细胞检测法具有高特异性、高灵敏性且容易被受试者接受等显著优点.作为最新型的脱落细胞检测法一免疫磁珠富集粪便脱落细胞检测法除具有一般脱落细胞检测法的优点外,还具有细胞回收效率高、肿瘤细胞特异性高等优点.本文阐述了脱落细胞检测大肠癌的原理和基本方法,着重介绍了免疫磁珠富集脱落细胞的原理和操作过程以及针对脱落细胞进行大肠癌检测的多种方法,并对全自动、快速、高通量的自动化脱落细胞检测仪器应用于脱落细胞检测进行了展望.     

结直肠癌无创筛查技术研究进展

结直肠癌和高危腺瘤的早期诊断及治疗,能够大大降低其死亡率。因而,在临床普及结直肠癌筛查有助于遏制该疾病的危害。目前,结肠镜检查是结直肠癌诊断的金标准,但该方法需要肠道准备,且具有侵入性,易造成肠道穿孔等缺点,导致患者依从性差,不利于其作为大规模筛查技术推广实施。近年来非侵入性的结直肠癌诊断方法发展迅速,这类方法主要通过检测粪便或血液样本中与结直肠癌发生相关的生物标志物,为结直肠癌的无创筛查提供了可能。但由于粪便、血液样本的成分复杂,对其中生物标志物的检测技术仍然在不断研究和完善中。本文分别从基于粪便样本和血液样本的检测技术两方面入手,探讨了近年来结直肠癌无创筛查技术的研究进展。     

大肠癌相关抗原LEA的血清学诊断

为了探讨抗人大肠癌相关抗原LEA在大肠癌患者的血清学中诊断价值。本文采用双抗夹心ELISA方法,并应用抗人大肠癌单克隆ND-1对大肠癌患者和正常人的血清进行了LEA抗原水平的检测,以及与CEA抗原水平检测的对比研究。结果表明:LEA在大肠癌患者血清学诊断的阳性率为68.7％,正常人为3.1％,CEA分别为56.6％和6.25％,在大肠癌的早期诊断中Dukes(A B)期LEA的阳性率为66.7％,明显高于CEA的36.1％,两者相比有显著统计学意义(P<0.05)。本研究还发现,大肠癌患者血清中LEA水平的表达与肿瘤的Dukes分期无关,而与肿瘤的分化程度密切相关,在高、中、低分化的大肠癌患者的血清中LEA的阳性表达率分别为86.8％、78.6％和11.8％,CEA则分别为71.1％、60.7％和17.6％。LEA在早期癌的阳性率为66.7％、晚期癌为70.2％,CEA分别为36.1％和72.3％。由此可见LEA在对人大肠癌患者血清学诊断的灵敏度和特异性均比CEA高,LEA对于高、中分化大肠癌患者的早期诊断,早期治疗和提高大肠癌患者的生存率方面将具有很重要的意义,是临床上具有应用价值的新型肿瘤标志物。     

宏基因组学二代测序技术在感染性呼吸系统疾病病原体诊断中的应用进展

呼吸系统感染发病率高,早期明确感染的病原体是提高治愈率、降低死亡率的关键.目前病原体培养仍是临床病原学诊断的主要方式,但其敏感性低、耗时较长,不利于早期诊断和治疗.宏基因组学测序技术具有覆盖病原体广泛、快速、无偏倚、无需特异性扩增的优势,在鉴定罕见、混合感染、免疫抑制患者感染和常规检测方法难以检测到病原体的诊断中有较高...     

散发性大肠癌组织及粪便脱落细胞p53蛋白的检测

为了解大肠癌组织及粪便脱落细胞中 p5 3蛋白表达对大肠癌诊断的临床意义 ,采用 S- P法对 38例大肠癌患者的癌组织及其中的 30例患者的粪便脱落细胞 p5 3蛋白进行检测。大肠癌组织中 p5 3蛋白阳性表达率为 39.47% (15 / 38) ,p5 3蛋白阳性与癌组织的分化程度及是否存在淋巴结转移均无相关性 (P>0 .0 5 )。粪便脱落细胞 p5 3蛋白阳性表达率为 36 .6 7%(11/ 30 ) ,脱落细胞与相应患者的癌组织中的 p5 3表达一致率为 83.33% (2 5 / 30 )。表明粪便中脱落细胞 p5 3蛋白的表达忠实反映了相应癌组织的 p5 3突变情况 ,对其检测有望成为大肠癌诊断及筛查的无创分子途径。同时表明粪便中脱落细胞核保持了肿瘤抗原决定簇的主要结构及生物特征 ,进行免疫细胞化学检测是可行的 ,为进行脱落细胞核其它肿瘤标志物或其它生物研究奠定了可行性的基础     

逆转录-聚合酶链反应快速检测柯萨奇B病毒

在柯萨奇B3病毒RNA5＇端非编码区选择并合成引物,用RT－PCR对我省苍山县23份无菌性脑炎患者的粪便标本进行检测,并与常规病毒分离、培养、鉴定进行了平行比较。两种检测结果基本一致。     

大肠癌组织及癌旁组织中c-myc,COX-2和CD44v6基因表达量差异的检测

目的:通过检测大肠癌组织和癌旁组织中c-myc,COX-2以及CD44v6的表达水平,探讨这三种基因在大肠癌发生和发展中的意义。方法:应用实时荧光定量PCR技术检测了10例大肠癌组织和相应癌旁组织中c-myc,COX-2以及CD44v6基因表达水平的差异,并探讨了各基因在癌组织中的表达水平与大肠癌临床病理指标之间的关系。结果:c-myc,COX-2以及CD44v6在大肠癌组织和癌旁组织中的表达均有非常显著性差异(P<0.01);癌组织中COX-2和CD44v6的表达与淋巴结转移、分化程度及Dukes分期有关(P<0.05)。结论:c-myc,COX-2和CD44v6的异常表达均与大肠癌密切相关,三者从不同方面对大肠癌的发生和发展起到了重要作用,可作为早期诊断和预后的参考指标。     

拉曼光谱在胃癌诊断中的应用与研究进展

拉曼光谱是一种分子振动光谱技术,具有分子水平的肿瘤检测和诊断能力.胃癌是常见恶性肿瘤,经常到晚期才得到诊断,死亡率较高,而早期胃癌预后较好,因此胃癌早期检测和诊断显得尤为重要.文章介绍了拉曼光谱用于胃癌早期检测和诊断的应用,并综述其研究进展,结果认为拉曼光谱探针与内镜整合,将实现胃癌活体检测和诊断,极具临床应用价值.     

逆转录-聚合酶链反应快速检测柯萨奇B病毒

在柯萨奇B3病毒RNA5＇端非编码区选择并合成引物,用RT－PCR对我省苍山县23份无菌性脑炎患者的粪便标本进行检测,并与常规病毒分离、培养、鉴定进行了平行比较。两种检测结果基本一致。     

Synthetic biology with RNA motifs

Structural motifs in naturally occurring RNAs and RNPs can be employed as new molecular parts for synthetic biology to facilitate the development of novel devices and systems that modulate cellular functions. In this review, we focus on the following: (i) experimental evolution techniques of RNA molecules in vitro and (ii) their applications for regulating gene expression systems in vivo. For experimental evolution, new artificial RNA aptamers and RNA enzymes (ribozymes) have been selected in vitro. These functional RNA molecules are likely to be applicable in the reprogramming of existing gene regulatory systems. Furthermore, they may be used for designing hypothetical RNA-based living systems in the so-called RNA world. For the regulation of gene expressions in living cells, the development of new riboswitches allows us to modulate the target gene expression in a tailor-made manner. Moreover, recently RNA-based synthetic genetic circuits have been reported by employing functional RNA molecules, expanding the repertory of synthetic biology with RNA motifs.     

Construction and analysis of dysregulated lncRNA-associated ceRNA network in colorectal cancer

Colorectal cancer (CRC) is one of the most frequently diagnosed digestive system cancer. The aim of the present study was to investigate the interactions among messenger RNAs (mRNAs), microRNAs (miRNAs), and long noncoding RNAs (lncRNAs) in CRC to reveal the mechanisms of CRC. Differentially expressed genes (DEGs) were identified from public gene expression data sets. One thousand eighty-one common dysregulated mRNAs in two data sets were identified. Gene function analysis and protein-protein interaction network analysis indicated that these DEGs might play important roles in CRC. LINC00365 was selected through coding- noncoding network analysis and its expression was validated upregulated in 22 paired clinical samples and four CRC cell lines. A competing endogenous RNA network composed of 70 miRNAs, nine mRNAs, and LINC00365 was constructed. Eight of nine mRNAs were validated upregulated in The Cancer Genome Atlas data set. Our results suggested that LINC00365 was an oncogene in CRC and it could regulate the expression of several mRNAs through sponging miRNAs.     

Ribozymes, riboswitches and beyond: regulation of gene expression without proteins

Although various functions of RNA are carried out in conjunction with proteins, some catalytic RNAs, or ribozymes, which contribute to a range of cellular processes, require little or no assistance from proteins. Furthermore, the discovery of metabolite-sensing riboswitches and other types of RNA sensors has revealed RNA-based mechanisms that cells use to regulate gene expression in response to internal and external changes. Structural studies have shown how these RNAs can carry out a range of functions. In addition, the contribution of ribozymes and riboswitches to gene expression is being revealed as far more widespread than was previously appreciated. These findings have implications for understanding how cellular functions might have evolved from RNA-based origins.     

Temporal expression and functional analysis of long non‐coding RNAs in colorectal cancer initiation

Long non‐coding RNAs (lncRNAs) have potential applications in clinical diagnosis and targeted cancer therapies. However, the expression profile of lncRNAs in colorectal cancer (CRC) initiation is still unclear. In this study, the expression profiles of lncRNAs and mRNAs were determined by microarray at specific tumour stages in an AOM/DSS‐induced primary colon cancer model. The temporal expression of lncRNAs was analysed by K‐means clustering. Additionally, weighted correlation network analysis (WGCNA) and gene ontology analysis were performed to construct co‐expression networks and establish functions of the identified lncRNAs and mRNAs. Our results suggested that 4307 lncRNAs and 5798 mRNAs are deregulated during CRC initiation. These differential expression genes (DEGs) exhibited a clear correlation with the differential stage of tumour initiation. WGCNA results suggested that a series of hub lncRNAs are involved in regulating cell stemness, colon inflammation, oxidative stress response and cell death at each stage. Among them, lncRNA H19 was up‐regulated in colon tumours and correlated with poor patient prognosis. Collectively, we have been the first to demonstrate the temporal expression and function of lncRNAs in CRC initiation. These results provide novel diagnosis and therapy targets for CRC.     

Exosomal surface protein markers in diagnosis of colorectal cancer

Colorectal cancer (CRC) is one of the most common primary malignancies. Early stages of the disease are asymptomatic in the majority of cases, leading to late detection and high mortality. Available noninvasive diagnostic techniques are limited in sensitivity and specificity, and designing new ones is still a pressing problem. Exosomes are membrane-derived microvesicles secreted into human biological fluids and provide a novel way to assess the course of an oncology disease. The review describes the repertoire of exosomal surface biomarkers found in the blood of CRC patients and the prospects of employing multiplexed tests for exosomal markers in early noninvasive diagnosis of cancer.     

Non-coding RNAs in Crop Genetic Modification: Considerations and Predictable Environmental Risk Assessments (ERA)

Of late non-coding RNAs (ncRNAs)-mediated gene silencing is an influential tool deliberately deployed to negatively regulate the expression of targeted genes. In addition to the widely employed small interfering RNA (siRNA)-mediated gene silencing approach, other variants like artificial miRNA (amiRNA), miRNA mimics, and artificial transacting siRNAs (tasiRNAs) are being explored and successfully deployed in developing non-coding RNA-based genetically modified plants. The ncRNA-based gene manipulations are typified with mobile nature of silencing signals, interference from viral genome-derived suppressor proteins, and an obligation for meticulous computational analysis to prevaricate any inadvertent effects. In a broad sense, risk assessment inquiries for genetically modified plants based on the expression of ncRNAs are competently addressed by the environmental risk assessment (ERA) models, currently in vogue, designed for the first generation transgenic plants which are based on the expression of heterologous proteins. Nevertheless, transgenic plants functioning on the foundation of ncRNAs warrant due attention with respect to their unique attributes like off-target or non-target gene silencing effects, small RNAs (sRNAs) persistence, food and feed safety assessments, problems in detection and tracking of sRNAs in food, impact of ncRNAs in plant protection measures, effect of mutations etc. The role of recent developments in sequencing techniques like next generation sequencing (NGS) and the ERA paradigm of the different countries in vogue are also discussed in the context of ncRNA-based gene manipulations.     

Noninvasive molecular biomarkers for the detection of colorectal cancer

Colorectal cancer (CRC) is the third most common malignancy in the world. Because CRC develops slowly from removable precancerous lesions, detection of the disease at an early stage during regular health examinations can reduce both the incidence and mortality of the disease. Although sigmoidoscopy offers significant improvements in the detection rate of CRC, its diagnostic value is limited by its high costs and inconvenience. Therefore, there is a compelling need for the identification of noninvasive biomarkers that can enable earlier detection of CRC. Accordingly, many validation studies have been conducted to evaluate genetic, epigenetic or protein markers that can be detected in the stool or in serum. Currently, the fecal-occult blood test is the most widely used method of screening for CRC. However, advances in genomics and proteomics combined with developments in other relevant fields will lead to the discovery of novel non invasive biomarkers whose usefulness will be tested in larger validation studies. Here, noninvasive molecular biomarkers that are currently used in clinical settings and have the potential for use as CRC biomarkers are discussed.     

Unlocking the potential of non-coding RNAs in cancer research and therapy

Non-coding RNAs (ncRNAs) have emerged as key regulators of gene expression, with growing evidence implicating their involvement in cancer development and progression. The potential of ncRNAs as diagnostic and prognostic biomarkers for cancer is promising, with emphasis on their use in liquid biopsy and tissue-based diagnostics. In a nutshell, the review comprehensively summarizes the diverse classes of ncRNAs implicated in cancer, including microRNAs, long non-coding RNAs, and circular RNAs, and their functions and mechanisms of action. Furthermore, we describe the potential therapeutic applications of ncRNAs, including anti-miRNA oligonucleotides, siRNAs, and other RNA-based therapeutics in cancer treatment. However, significant challenges remain in developing effective ncRNA-based diagnostics and therapeutics, including the lack of specificity, limited understanding of mechanisms, and delivery challenges. This review also covers the current state-of-the-art non-coding RNA research technologies and bioinformatic analysis tools. Lastly, we outline future research directions in non-coding RNA research in cancer, including developing novel biomarkers, therapeutic targets, and modalities. In summary, this review provides a comprehensive understanding of non-coding RNAs in cancer and their potential clinical applications, highlighting both the opportunities and challenges in this rapidly evolving field.