The mechanisms and process of acephate degradation by hydroxyl radical and hydrated electron

The degradation process of acephate in aqueous solution with OH and ${\text{e}}_{\text{aq}}^{?}$ produced by ⁶⁰Co-γ irradiation and electron pulse radiolysis was studied in the present paper. In the aqueous solution, acephate reacted with ${\text{e}}_{\text{aq}}^{?}$ and transformed to transient species which can absorb weakly in the wavelength range of 300–400?nm and decay very fast. According to the decay of hydrated electron, the reaction rate constant of ${\text{e}}_{\text{aq}}^{?}$ and acephate is (3.51?±?0.076)?×?10⁹?dm³·mol^?1·s^?1. The transient species produced in the reaction of OH and acephate do not distinctly absorb the light in the wavelength range of 300–700?nm, so the decay and kinetics of the transient species cannot determinedirectly. The competing reaction of KSCN oracephate with OH were studied to obtain the reaction rate constant of OH and acephate, which is (9.1?±?0.11)?×?10⁸?dm³·mol^?1·s^?1. Although acetylamide and inorganic ions were determined in the products of the reaction of acephate with OH or ${\text{e}}_{\text{aq}}^{?}$, the concentration of inorganic ions in the products of the reaction of acephate with OH is higher than that in the product of the reaction of acephate with ${\text{e}}_{\text{aq}}^{?}$. Moreover, there were sulfide in the products of the reaction of acephatewith ${\text{e}}_{\text{aq}}^{?}$. The degradation pathways of acephate by OH and ${\text{e}}_{\text{aq}}^{?}$ were also proposed based on the products from GC-MS.     

Protein crystal’s shape and polymorphism prediction within the limits resulting from the exploration of the Miyazawa–Jernigan matrix

A computer study of the prediction of the protein crystal’s shape and polymorphism of crystal’s structures within the limits resulting from the exploration of the Miyazawa–Jernigan matrix is presented. In this study, a coarse-graining procedure was applied to prepare a two-dimensional growth unit, where instead of full atom representation of the protein a two-type (hydrophobic–hydrophilic, HP) aminoacidal representation was used. The interaction energies between hydrophobic ($E_{\text{HH}}$) aminoacids were chosen from the well-known HP-type models ($E_{\text{HH}}\in [-4\text{,}-3\text{,}-2.3\text{,}-1]$), whereas interaction energies between hydrophobic and hydrophilic aminoacids ($E_{\text{HP}}$) as well as interaction energies between hydrophilic aminoacids ($E_{\text{PP}}$) were chosen from the range: $<-1\text{,}1>$, but not all values from this range fulfiled limitations resulting from the exploration of the Miyazawa–Jernigan matrix. Exploring every positively vetted combinations of energy interactions a polymorphism of the unit cell was observed what led to the fact that different final crystal’s shapes were obtained.     

Photosynthetic adaptation of soybean due to varying effectiveness of N2 fixation by two distinct Bradyrhizobium japonicum strains

Rhizobial N₂ fixation is a costly biochemical process, which takes 6–14% of current photosynthate (C) from legumes, without compromising grain productivity. In addition to the effects of leaf N nutrition, rhizobial symbiosis could stimulate photosynthesis due to the removal of C sink limitation by nodule activity. To test that hypothesis, we compared the photosynthetic capacity of soybean plants inoculated with two different strains of Bradyrhizobium japonicum (CPAC 390 or CPAC 7), varying in the effectiveness to fix N₂, with plants fertilized with NO₃⁻. Nodulated plants had 14–31% higher rates of photosynthesis and accumulated less starch in the leaves than N-fertilized plants. There was evidence that B. japonicum CPAC 390 had higher carbon costs of N₂ fixation compared with CPAC 7, but the increases in carbon costs were accompanied by higher rates of photosynthesis. By applying a biochemical model of leaf photosynthesis, including the limitations of Rubisco activity $(V_{{\text{C}}_{\text{max}}})$, electron transport rates (J) and triose-P utilization (TPU), we show that soybean plants adapt their photosynthetic capacity to support the stronger carbon sink created by faster rates of N₂ fixation. We observed that plants associated with CPAC 7 (of low effectiveness to fix N₂) increased their photosynthesis by removing sink limitation solely (with a constant $V_{{\text{C}}_{\text{max}}}$) whereas plants associated with CPAC 390 (of high effectiveness to fix N₂) increased their photosynthesis by sink stimulation. Based on the model, we propose that sink stimulation is governed by a positive feedback between TPU and Rubisco activation, resulting in an increased $V_{{\text{C}}_{\text{max}}}$.