Shifts in identity and activity of methanotrophs in arctic lake sediments in response to temperature changes

Methane (CH(4)) flux to the atmosphere is mitigated via microbial CH(4) oxidation in sediments and water. As arctic temperatures increase, understanding the effects of temperature on the activity and identity of methanotrophs in arctic lake sediments is important to predicting future CH(4) emissions. We used DNA-based stable-isotope probing (SIP), quantitative PCR (Q-PCR), and pyrosequencing analyses to identify and characterize methanotrophic communities active at a range of temperatures (4°C, 10°C, and 21°C) in sediments (to a depth of 25 cm) sampled from Lake Qalluuraq on the North Slope of Alaska. CH(4) oxidation activity was measured in microcosm incubations containing sediments at all temperatures, with the highest CH(4) oxidation potential of 37.5 μmol g(-1) day(-1) in the uppermost (depth, 0 to 1 cm) sediment at 21°C after 2 to 5 days of incubation. Q-PCR of pmoA and of the 16S rRNA genes of type I and type II methanotrophs, and pyrosequencing of 16S rRNA genes in (13)C-labeled DNA obtained by SIP demonstrated that the type I methanotrophs Methylobacter, Methylomonas, and Methylosoma dominated carbon acquisition from CH(4) in the sediments. The identity and relative abundance of active methanotrophs differed with the incubation temperature. Methylotrophs were also abundant in the microbial community that derived carbon from CH(4), especially in the deeper sediments (depth, 15 to 20 cm) at low temperatures (4°C and 10°C), and showed a good linear relationship (R = 0.82) with the relative abundances of methanotrophs in pyrosequencing reads. This study describes for the first time how methanotrophic communities in arctic lake sediments respond to temperature variations.     

Post-breeding information gathering and breeding territory shifts in northern wheatears

1. Prospecting non-breeding individuals have been shown to collect information on breeding sites a year ahead of breeding, but whether experienced breeders prospect future breeding sites is less well-known. Using data on post-breeding movements and between-year site shifts from a long-term population study of the migratory northern wheatear (Oenanthe oenanthe L.), we investigated (1) whether breeding territory selection of experienced breeders was a two-step process, made partly in the post-breeding period and partly at the time of territory establishment in the subsequent year; (2) predictions of which factors and cues correlate to site shifts at these two selection periods; and (3) consequences of territory shifts. 2. Many wheatears stayed close to their breeding site during the post-breeding period, but about 20% shifted to new potential breeding sites. Males that shifted to a new post-breeding location were also more likely to shift territory between years. 3. Factors linked to site shifts differed in the two investigated episodes of site selection. Post-breeding site shifts were linked to an environmental predictor of individual fitness, which is also related to foraging conditions (i.e. wheatears moved from tall to short field layers). Post-breeding site shifts, however, were not more frequent among young and failed breeders which may benefit most from prospecting for alternative breeding sites. Instead, in line with predictions of improving breeding conditions between-year site shifts were more frequent among young (only males) and failed breeders, whereas the link to territory field layer height disappeared. 4. Young males occupied more attractive sites and were more likely to breed successfully in year t + 1, but this improvement could also be expected from random choice. 5. Our results suggest that even though site shifts are determined partly during the post-breeding period, post-breeding movements of experienced breeders may be costly, especially when the breeding site is also a good foraging and moulting site in the post-breeding season. Under such circumstances an individual's choice of breeding site may often be determined at arrival in the subsequent year.     

Metabolic response to air temperature and wind in day-old mallards and a standard operative temperature scale

Most duckling mortality occurs during the week following hatching and is often associated with cold, windy, wet weather and scattering of the brood. We estimated the thermoregulatory demands imposed by cold, windy weather on isolated 1-d-old mallard (Anas platyrhynchos) ducklings resting in cover. We measured O2 consumption and evaporative water loss at air temperatures from 5 degrees to 25 degrees C and wind speeds of 0.1, 0.2, 0.5, and 1.0 m/s. Metabolic heat production increased as wind increased or temperature decreased but was less sensitive to wind than that of either adult passerines or small mammals. Evaporative heat loss ranged from 5% to 17% of heat production. Evaporative heat loss and the ratio of evaporative heat loss to metabolic heat production was significantly lower in rest phase. These data were used to define a standard operative temperature (Tes) scale for night or heavy overcast conditions. An increase of wind speed from 0.1 to 1 m/s decreased Tes by 3 degrees -5 degrees C.     

The autotrophic contribution to soil respiration in a northern temperate deciduous forest and its response to stand disturbance

The goal of this study was to evaluate the contribution of oak trees (Quercus spp.) and their associated mycorrhizal fungi to total community soil respiration in a deciduous forest (Black Rock Forest) and to explore the partitioning of autotrophic and heterotrophic respiration. Trees on twelve 75 × 75-m plots were girdled according to four treatments: girdling all the oaks on the plot (OG), girdling half of the oak trees on a plot (O50), girdling all non-oaks on a plot (NO), and a control (C). In addition, one circular plot (diameter 50 m) was created where all trees were girdled (ALL). Soil respiration was measured before and after tree girdling. A conservative estimate of the total autotrophic contribution is approximately 50%, as indicated by results on the ALL and OG plots. Rapid declines in carbon dioxide (CO₂) flux from both the ALL and OG plots, 37 and 33%, respectively, were observed within 2 weeks following the treatment, demonstrating a fast turnover of recently fixed carbon. Responses from the NO and O50 treatments were statistically similar to the control. A non-proportional decline in respiration rates along the gradient of change in live aboveground biomass complicated partitioning of the overall rate of soil respiration and indicates that belowground carbon flux is not linearly related to aboveground disturbance. Our findings suggest that in this system there is a threshold disturbance level between 35 and 74% of live aboveground biomass loss, beyond which belowground dynamics change dramatically.     

Naphthalene biodegradation in temperate and arctic marine microcosms

Naphthalene, the smallest polycyclic aromatic hydrocarbon (PAH), is found in abundance in crude oil, its major source in marine environments. PAH removal occurs via biodegradation, a key process determining their fate in the sea. Adequate estimation of PAH biodegradation rates is essential for environmental risk assessment and response planning using numerical models such as the oil spill contingency and response (OSCAR) model. Using naphthalene as a model compound, biodegradation rate, temperature response and bacterial community composition of seawaters from two climatically different areas (North Sea and Arctic Ocean) were studied and compared. Naphthalene degradation was followed by measuring oxygen consumption in closed bottles using the OxiTop^® system. Microbial communities of untreated and naphthalene exposed samples were analysed by polymerase chain reaction denaturing gradient gel electrophoresis (PCR–DGGE) and pyrosequencing. Three times higher naphthalene degradation rate coefficients were observed in arctic seawater samples compared to temperate, at all incubation temperatures. Rate coefficients at in situ temperatures were however, similar (0.048 day^?1 for temperate and 0.068 day^?1 for arctic). Naphthalene biodegradation rates decreased with similar Q₁₀ ratios (3.3 and 3.5) in both seawaters. Using the temperature compensation method implemented in the OSCAR model, Q₁₀ = 2, biodegradation in arctic seawater was underestimated when calculated from the measured temperate k₁ value, showing that temperature difference alone could not predict biodegradation rates adequately. Temperate and arctic untreated seawater communities were different as revealed by pyrosequencing. Geographic origin of seawater affected the community composition of exposed samples.     

Microfaunal response to fertilization of an arctic tundra stream

1. As part of a whole-system study, the response of the heterotrophic microfaunal community colonizing artificial substrata (polyfoam units) to fertilization of an arctic tundra stream was followed for 6 weeks during the summer. 2. Dominant heterotrophic microfauna observed included amoebae (approximately 40% of colonizing biomass), rotifers (36% of biomass) and ciliates (25% of biomass). 3. Biomass of heterotrophic microfauna on artificial substrata was not significantly different in a control reach and an experimental reach fertilized with phosphorus (loading rate ten times ambient), but in a reach fertilized with both phosphorus and nitrogen (loading rates ten times ambient) biomass was double that of the control and phosphorus-fertilized reaches. The lack of response in the phosphorus reach was probably due to greater insect grazing as a result of previous phosphorus fertilization of this reach. 4. Abundance of microfauna on epilithic surfaces in the river was higher on rocks from pools than on rocks from riffle areas, but abundance on the artificial substrata was higher than on the natural rocks. 5. The results suggest that microfauna of arctic tundra streams are regulated by grazers and that their importance in transfers among trophic levels is greater in pools than in riffles.     

Ultraviolet and temperature effects on planktonic rotifers and crustaceans in northern temperate lakes

1. Anthropogenic stressors such as climate change, ozone depletion and acidification may act in concert to alter ultraviolet (UV) light and temperature regimes in freshwater ecosystems. These physical and chemical changes will inevitably affect zooplankton community dynamics, but little is known about their relative effects on different species in natural communities. During spring, species that migrate to surface waters to take advantage of warmer temperatures may be especially vulnerable as UV levels can be high. 2. The objective of this study was to investigate the in situ effects of UV and temperature on a natural assemblage of planktonic rotifers and crustaceans during the spring. We performed in situ exposure experiments in two lakes with different surface temperatures. 3. Exposure to UV had a significant effect on the abundance and/or reproduction of four rotifers: Gastropus spp., Kellicottia bostonensis, Kellicottia longispina, Keratella spp.; two cladocerans: Holopedium gibberum, Daphnia catawba, and one copepod: Leptodiaptomus minutus. Incubation under cooler temperatures had a negative effect on K. longispina and H. gibberum. Temperature and UV had a significant interactive effect on abundance and/or reproduction of L. minutus and Ploesoma truncatum. Our results indicate that changes in underwater UV and temperature can significantly influence the composition of the zooplankton community and ultimately food web dynamics.     

Shifts in abundance and growth of slimy sculpin in response to changes in the predator population in an arctic Alaskan lake

Lake trout (Salvelinus namaycush) in Toolik Lake are tightly coupled to the benthos, since they have no pelagic forage fishes. Slimy sculpins (Cottus cognatus) are a prey of lake trout and the soft sediment chironomids are an important prey for the sculpin. Our previous work showed that the median size of lake trout in Toolik Lake had decreased significantly between 1977 and 1986, and smaller lake trout are likely to be less effective as sculpin predators. Using our historic data on the slimy sculpin population from 1978, we took advantage of the recent change in the predator community to examine for subsequent changes in the sculpin community. Between 1978 and 1987, the percentage of slimy sculpin caught in the soft sediments has increased (25% to 39.5%). In 1987 there was a significant difference in the mean weight of sculpin caught on different substrates. The mean individual weight of sculpins increased from the nearshore rock area to the rock/soft-sediment interface to the soft sediments. There was no difference in mean individual weight with habitat in 1978. The mean total length at age for slimy sculpins during this time has also increased significantly. We suggest that the risk of predation while foraging in the soft sediments has declined. The increased use of the soft sediment area appears to have contributed to their increased growth, likely due to greater food abundance.     

Physiognomic changes in response to herbivory increase carbon allocation to roots in a temperate grassland of central Argentina

Plant Ecology - In most temperate grasslands, cattle grazing can promote physiognomic changes on plant communities, as well as changes in species growth patterns. Through these changes in...     

Detecting changes in arctic tundra plant communities in response to warming over decadal time scales

Detecting the response of vegetation to climate forcing as distinct from spatial and temporal variability may be difficult, if not impossible, over the typical duration of most field studies. We analyzed the spatial and interannual variability of plant functional type biomass from field studies in low arctic tussock tundra and compared these to climate change simulations of plant community composition using a dynamic tundra vegetation model (ArcVeg). Spatial heterogeneity of peak season live aboveground biomass was estimated using field samples taken from low arctic tundra at Ivotuk, Alaska (68.5°N, 155.7°W) in 1999. Coefficients of variation for live aboveground biomass at the 1 m² scale ranged from 14.6% for deciduous shrubs, 18.5% for graminoids and 25.3% for mosses to over 57% for forbs and lichens. Spatial heterogeneity in the ArcVeg dynamic vegetation model was simulated to be greater than the field data, ranging from 37.1% for deciduous shrubs to 107.9% for forbs. Disturbances in the model, such as caribou grazing and freezing–thawing of soil, as well as demographic stochasticity, led to the greater variability in the simulated results. Temporal variances of aboveground live biomass over a 19-year period using data from Toolik Lake, AK fell within the range of field and simulation spatial variances. However, simulations using ArcVeg suggest that temporal variability can be substantially less than site-scale spatial variability. Field data coupled with ArcVeg simulations of climate change scenarios indicate that some changes in plant community composition may be detectable within two decades following the onset of warming, and shrubs and mosses might be the key indicators of community change. Model simulations also project increasing landscape scale spatial heterogeneity (particularly of shrubs) with increasing temperatures.     

Soil organic matter and litter chemistry response to experimental N deposition in northern temperate deciduous forest ecosystems

The effects of atmospheric nitrogen (N) deposition on organic matter decomposition vary with the biochemical characteristics of plant litter. At the ecosystem‐scale, net effects are difficult to predict because various soil organic matter (SOM) fractions may respond differentially. We investigated the relationship between SOM chemistry and microbial activity in three northern deciduous forest ecosystems that have been subjected to experimental N addition for 2 years. Extractable dissolved organic carbon (DOC), DOC aromaticity, C : N ratio, and functional group distribution, measured by Fourier transform infrared spectra (FTIR), were analyzed for litter and SOM. The largest biochemical changes were found in the sugar maple–basswood (SMBW) and black oak–white oak (BOWO) ecosystems. SMBW litter from the N addition treatment had less aromaticity, higher C : N ratios, and lower saturated carbon, lower carbonyl carbon, and higher carboxylates than controls; BOWO litter showed opposite trends, except for carbonyl and carboxylate contents. Litter from the sugar maple–red oak (SMRO) ecosystem had a lower C : N ratio, but no change in DOC aromaticity. For SOM, the C : N ratio increased with N addition in SMBW and SMRO ecosystems, but decreased in BOWO; N addition did not affect the aromaticity of DOC extracted from mineral soil. All ecosystems showed increases in extractable DOC from both litter and soil in response to N treatment. The biochemical changes are consistent with the divergent microbial responses observed in these systems. Extracellular oxidative enzyme activity has declined in the BOWO and SMRO ecosystems while activity in the SMBW ecosystem, particularly in the litter horizon, has increased. In all systems, enzyme activities associated with the hydrolysis and oxidation of polysaccharides have increased. At the ecosystem scale, the biochemical characteristics of the dominant litter appear to modulate the effects of N deposition on organic matter dynamics.     

Body mass changes in waders (Charadrii) in a high arctic area at northern Taimyr, Siberia

Body mass data were collected for 5 species of tundra waders during 6 breeding seasons to study variation in nutrient reserves relative to high arctic climatic conditions and the stage of reproduction. Structural size was accounted for by the 1st Principal Component of external linear measurements: wing length, bill length and tarsus length. SandpipersCalidris spp. were on average lighter in phenologically late seasons, while mass of Turnstones (Arenaria interpres) was similar in all years. Mass of waders was lower during brood-rearing than during incubation. Body mass during pre-nesting was most variable between years, reflecting the unpredictable weather conditions in this period. Monogamous species (KnotsCalidris canutus and Turnstones) began to breed earlier, and were on average, as heavy during the pre-nesting period as during incubation. In contrast, species with a proven or suspected rapid double-clutch breeding system (Little StintsC. minuta and SanderlingsC. alba) began to breed later and had during the laying period masses close to those of adults attending broods, and lower than during incubation. Body mass of the two latter species and Curlew Sandpipers (Calidris ferruginea) varied during incubation, reaching peak at 7 to 13 days after clutch completion.

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Zusammenfassung Von fünf Tundra-Watvogelarten wurden in sechs Brutperioden Daten zur Körpermasse gewonnen, um die Dynamik der Energiereserven in Abhängigkeit von den klimatischen Bedingungen der Hocharktis und vom Fortpflanzungsstadium zu analysieren. Der Einfluß der Körpermaße auf die Masse wurde bei der statistischen Auswertung durch die Einbeziehung der 1. Hauptkomponente von Flügel-, Schnabel- und Tarsuslänge berücksichtigt. StrandläuferCalidris spec. erwiesen sich in späten Jahren als leichter, während in der Körpermasse von Steinwälzern (Arenaria interpres) keine Unterschiede festgestellt werden konnten. Die Körpermasse aller untersuchter Arten war während der Betreuung der Jungvögel geringer als während Brütezeit. Die Masse in der Zeit vor der Brut variierte in Übereinstimmung mit den wechselnden Wetterbedingungen in den einzelnen Jahren am stärksten. Monogame Arten (KnutCalidris canutus und Steinwälzer) begannen früher mit der Fortpflanzung; ihre Körpermasse in der Phase von der Brut und während der Brütezeit war im Mittel etwa gleich. Im Gegensatz dazu begannen Arten, bei denen ein Doppelbrutsystem nachgewiesen wurde oder vermutet wird (ZwergstrandläuferC. minuta und SanderlingC. alba), später mit dem Nestbau, wobei die Körpermasse auf ein Niveau absinkt, das dem während der Betreuung der Jungvögel nahekommt und geringer ist, als das während der Brütezeit. Bei den beiden letzten Arten sowie beim Sichelstrandläufer (Calidris ferrugunea) veränderte sich die Körpermasse während des Brütens und erreichte ein Maximum zwischen dem 7. und dem 13. Tag nach Beendigung der Eiablage.

     

Transient response of continuous cultures to changes in temperature

The purpose of this experimental study was to examine the transient response of a chemostat-type continuous culture of Escherichia coli B to step changes in temperature by following transient limiting substrate concentration and calculating from it the transient growth rate. The transient response to step changes of temperature was tested for four different situations. In the first two cases, temperature was shifted down from 37 to 27°C., and 37 to 32°C. In the last two, it was shifted up from 32 to 37°C., and 27 to 37°C. When the temperature was shifted up, the growth rate increased rather rapidly to its transient maximum value and then decreased slowly until it, settled back into the steady-state value. On the other hand, when the temperature was shifted down, the growth rate decreased relatively rapidly to its transient minimum and then it slowly increased and returned gradually to the steady-state value. The magnitude of the transients was less than would be expected if the transient growth rates followed an Arrhenius function.     

The bioclimate in temperate and northern cities

Climate is a basic component of the human environment. Developments in building design and indoor climate control have contributed greatly to improving human health and comfort. By contrast, the possibilities for improving urban climatic conditions by deliberate planning have been poorly exploited. The structure and processes of the urban atmosphere in extratropical regions are briefly described. The impact of certain selected urban climates on human health is summarized. The need for relevant bioclimatological design tools for applications in urban planning is stressed, followed by a brief review of some recent work on human thermal comfort. It is argued that the modification of present day comfort criteria to reflect human adaptation to climate may be important for further improvements of indoor climate, as well as for deducing the emissions of air pollutants and greenhouse gases.